Sequences
The following sequences are available for this feature:
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCCACCTCCAAAGAAAGTTTGGAATCGTTTTGCCTCTAAAGTCATCTCCAAGCTCGGCCGTTTCCCCAAGCCATCGGAAGCGATAACTCGAACGACACGTCGGTTTTTGAGTCGTCTGAGGACGGTGCACGGAAGGCGGTGCTGCCGCTGCAGCTGCCACCACCAGCCGGAATATTGGGTGGGGGTTCACCGGAGTAGTTTTTGGAATAATGATAATAGTAATAATTATAATGTGGAAGTTGAATTTGAAGATGAAGATGAGGAATTGGGAGCCATGGAAGATCAAGCTGTGGATGAAAAGGCTGAGGAGTTTATTGCTAAGTTTCATCAAACTTTGAAGCTTGAAAGATTGCAACATTTTTGA
ATGCTTCCACCTCCAAAGAAAGTTTGGAATCGTTTTGCCTCTAAAGTCATCTCCAAGCTCGGCCGTTTCCCCAAGCCATCGGAAGCGATAACTCGAACGACACGTCGGTTTTTGAGTCGTCTGAGGACGGTGCACGGAAGGCGGTGCTGCCGCTGCAGCTGCCACCACCAGCCGGAATATTGGGTGGGGGTTCACCGGAGTAGTTTTTGGAATAATGATAATAGTAATAATTATAATGTGGAAGTTGAATTTGAAGATGAAGATGAGGAATTGGGAGCCATGGAAGATCAAGCTGTGGATGAAAAGGCTGAGGAGTTTATTGCTAAGTTTCATCAAACTTTGAAGCTTGAAAGATTGCAACATTTTTGA
ATGCTTCCACCTCCAAAGAAAGTTTGGAATCGTTTTGCCTCTAAAGTCATCTCCAAGCTCGGCCGTTTCCCCAAGCCATCGGAAGCGATAACTCGAACGACACGTCGGTTTTTGAGTCGTCTGAGGACGGTGCACGGAAGGCGGTGCTGCCGCTGCAGCTGCCACCACCAGCCGGAATATTGGGTGGGGGTTCACCGGAGTAGTTTTTGGAATAATGATAATAGTAATAATTATAATGTGGAAGTTGAATTTGAAGATGAAGATGAGGAATTGGGAGCCATGGAAGATCAAGCTGTGGATGAAAAGGCTGAGGAGTTTATTGCTAAGTTTCATCAAACTTTGAAGCTTGAAAGATTGCAACATTTTTGA
MLPPPKKVWNRFASKVISKLGRFPKPSEAITRTTRRFLSRLRTVHGRRCCRCSCHHQPEYWVGVHRSSFWNNDNSNNYNVEVEFEDEDEELGAMEDQAVDEKAEEFIAKFHQTLKLERLQHF
Homology
BLAST of Lsi02G018850 vs. ExPASy TrEMBL
Match:
A0A0A0K332 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G145980 PE=4 SV=1)
HSP 1 Score: 162.5 bits (410), Expect = 1.1e-36
Identity = 95/126 (75.40%), Postives = 104/126 (82.54%), Query Frame = 0
BLAST of Lsi02G018850 vs. NCBI nr
Match:
KGN44055.1 (hypothetical protein Csa_015429 [Cucumis sativus])
HSP 1 Score: 162.5 bits (410), Expect = 2.2e-36
Identity = 95/126 (75.40%), Postives = 104/126 (82.54%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A0A0K332 1.1e-36 75.40 Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G145980 PE=4 SV=1 [more]
Match Name E-value Identity Description
KGN44055.1 2.2e-36 75.40 hypothetical protein Csa_015429 [Cucumis sativus] [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
A T G C T T C C A C C T C C A A A G A A A G T T T G G A A T C G T T T T G C C T C T A A A G T C A T C T C C A A G C T C G G C C G T T T C C C C A A G C C A T C G G A A G C G A T A A C T C G A A C G A C A C G T C G G T T T T T G A G T C G T C T G A G G A C G G T G C A C G G A A G G C G G T G C T G C C G C T G C A G C T G C C A C C A C C A G C C G G A A T A T T G G G T G G G G G T T C A C C G G A G T A G T T T T T G G A A T A A T G A T A A T A G T A A T A A T T A T A A T G T G G A A G T T G A A T T T G A A G A T G A A G A T G A G G A A T T G G G A G C C A T G G A A G A T C A A G C T G T G G A T G A A A A G G C T G A G G A G T T T A T T G C T A A G T T T C A T C A A A C T T T G A A G C T T G A A A G A T T G C A A C A T T T T T G A 50 100 150 200 250 300 350 Expect = 1.2E-9 / Score = 37.6 Sequence PF05553
IPR Term IPR Description Source Source Term Source Description Alignment
IPR008480 Protein of unknown function DUF761, plant PFAM PF05553 DUF761 coord: 97..120
Relationships
The following mRNA feature(s) are a part of this gene:
