Lsi02G018350 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G018350
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Nuclear transcription factor Y subunit B-3
Location	chr02: 24144405 .. 24145055 (-)
RNA-Seq Expression	Lsi02G018350
Synteny	Lsi02G018350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAGTTCACTGACCACTGCTCTTCACTCTGTTCATCATCATCATTATCATCCTCTTTCACACAATCACGCCTCAATGTCGCCATTGTTTCAACTCTTCTAGCTTCAATTTGCTTCCTCAGTCTCCGATTCTCACCTTCTTTCCTCACGCTCCTCCTCCTTTTAATCCCTTCCACTCTCTTCCTCGCAAAGAAAAAATCAGATTCGCTTCAAATCTCCGCCGCCGACCACCTGTTCGACCAAAAGCCTCAAACAAAAGCGGAAGAAGAATCCGCCGCGCAAATCGGAGAAGAGCATTCTTCCGATGATGAAACTAGTAGTAGTAGCAGCCAGAGTAACAACAATGGCGGATTAAGTAGTGGAGATTTCAACTCCGATCTCTGGATGTATTTAGACGAACTGTCTCGGAATCTTCCGTCTTCTGAGGATTCGAGTTCCGAAGACGACGATAGCTTGATCGAAATTCCTCTTCTTCCAAATTTGAATGCGATTCGAAATCTTGAAACGTGTTTGCCTGATTTGTTACCGGATTCTGTTTTGAGACAACACGGATTTGTGGAGCTTTTGGAAGAGATCAATGAGGAAGATAACTTGATTGAGATCGATATTTCCAAAGGTTTCAATCGATTTTCCGCTGTTTGCAATTGA

mRNA sequence

ATGGAAAAGTTCACTGACCACTGCTCTTCACTCTGTTCATCATCATCATTATCATCCTCTTTCACACAATCACGCCTCAATGTCGCCATTGTTTCAACTCTTCTAGCTTCAATTTGCTTCCTCAGTCTCCGATTCTCACCTTCTTTCCTCACGCTCCTCCTCCTTTTAATCCCTTCCACTCTCTTCCTCGCAAAGAAAAAATCAGATTCGCTTCAAATCTCCGCCGCCGACCACCTGTTCGACCAAAAGCCTCAAACAAAAGCGGAAGAAGAATCCGCCGCGCAAATCGGAGAAGAGCATTCTTCCGATGATGAAACTAGTAGTAGTAGCAGCCAGAGTAACAACAATGGCGGATTAAGTAGTGGAGATTTCAACTCCGATCTCTGGATGTATTTAGACGAACTGTCTCGGAATCTTCCGTCTTCTGAGGATTCGAGTTCCGAAGACGACGATAGCTTGATCGAAATTCCTCTTCTTCCAAATTTGAATGCGATTCGAAATCTTGAAACGTGTTTGCCTGATTTGTTACCGGATTCTGTTTTGAGACAACACGGATTTGTGGAGCTTTTGGAAGAGATCAATGAGGAAGATAACTTGATTGAGATCGATATTTCCAAAGGTTTCAATCGATTTTCCGCTGTTTGCAATTGA

Coding sequence (CDS)

ATGGAAAAGTTCACTGACCACTGCTCTTCACTCTGTTCATCATCATCATTATCATCCTCTTTCACACAATCACGCCTCAATGTCGCCATTGTTTCAACTCTTCTAGCTTCAATTTGCTTCCTCAGTCTCCGATTCTCACCTTCTTTCCTCACGCTCCTCCTCCTTTTAATCCCTTCCACTCTCTTCCTCGCAAAGAAAAAATCAGATTCGCTTCAAATCTCCGCCGCCGACCACCTGTTCGACCAAAAGCCTCAAACAAAAGCGGAAGAAGAATCCGCCGCGCAAATCGGAGAAGAGCATTCTTCCGATGATGAAACTAGTAGTAGTAGCAGCCAGAGTAACAACAATGGCGGATTAAGTAGTGGAGATTTCAACTCCGATCTCTGGATGTATTTAGACGAACTGTCTCGGAATCTTCCGTCTTCTGAGGATTCGAGTTCCGAAGACGACGATAGCTTGATCGAAATTCCTCTTCTTCCAAATTTGAATGCGATTCGAAATCTTGAAACGTGTTTGCCTGATTTGTTACCGGATTCTGTTTTGAGACAACACGGATTTGTGGAGCTTTTGGAAGAGATCAATGAGGAAGATAACTTGATTGAGATCGATATTTCCAAAGGTTTCAATCGATTTTCCGCTGTTTGCAATTGA

Protein sequence

MEKFTDHCSSLCSSSSLSSSFTQSRLNVAIVSTLLASICFLSLRFSPSFLTLLLLLIPSTLFLAKKKSDSLQISAADHLFDQKPQTKAEEESAAQIGEEHSSDDETSSSSSQSNNNGGLSSGDFNSDLWMYLDELSRNLPSSEDSSSEDDDSLIEIPLLPNLNAIRNLETCLPDLLPDSVLRQHGFVELLEEINEEDNLIEIDISKGFNRFSAVCN

Homology

[Close]

BLAST of Lsi02G018350 vs. ExPASy TrEMBL
Match: A0A6J1J2I9 (uncharacterized protein LOC111480668 OS=Cucurbita maxima OX=3661 GN=LOC111480668 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 6.3e-72
Identity = 172/237 (72.57%), Postives = 184/237 (77.64%), Query Frame = 0


Query: 1   MEKFTDHCSSLCSS----SSLSSSFTQSRLNVAIVSTLLASICFLSLRFSPSFLTLLLLL 60
           MEKFTDHC+SLCSS    SS SSS  QSRLNV +VSTLLASICFLSLRFSPSFL+LLLLL
Sbjct: 1   MEKFTDHCASLCSSSSPPSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLSLLLLL 60

Query: 61  IPSTLFLAKKKSDSLQ--------ISAADHLFDQKPQTKAEEESAAQIGEEHSSDDETSS 120
           IPS  FLA KKSDS Q        IS A HLFD+KPQ   EE SAAQIGEE SSDD++SS
Sbjct: 61  IPSFFFLANKKSDSSQISDRNPLLISTAGHLFDEKPQRTVEELSAAQIGEELSSDDDSSS 120

Query: 121 SSSQSNNNGGLSSGDFNSDLWMYLDELSRNLPSSEDSSSEDDDSLIEIPLLPNLNAI--- 180
                 N G  S GDF SDLWM LDEL+RNLP S+DSSSEDDDSLIEIPLLP  +AI   
Sbjct: 121 ------NGGFESGGDFESDLWMCLDELARNLPFSDDSSSEDDDSLIEIPLLPYSDAIRTD 180

Query: 181 ------RNLETCLPDLLPDSVLRQHGFVELLEEINEEDNLIEIDISKGFNRFSAVCN 217
                 RNLETCLPDLLPDSVL+Q+GFVELLEEINEEDNLIEIDIS+GFNR S VCN
Sbjct: 181 SNRALVRNLETCLPDLLPDSVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN 231

[Close]

BLAST of Lsi02G018350 vs. ExPASy TrEMBL
Match: A0A6J1FNF5 (uncharacterized protein LOC111446758 OS=Cucurbita moschata OX=3662 GN=LOC111446758 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 7.7e-70
Identity = 171/242 (70.66%), Postives = 182/242 (75.21%), Query Frame = 0


Query: 1   MEKFTDHCSSLC--------SSSSLSSSFTQSRLNVAIVSTLLASICFLSLRFSPSFLTL 60
           MEKFTDHC+SLC        SSSS SSS  QSRLNV +VSTLLASICFLSLRFSPSFL+L
Sbjct: 1   MEKFTDHCASLCSSSSPPPSSSSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLSL 60

Query: 61  L-LLLIPSTLFLAKKKSDSLQ--------ISAADHLFDQKPQTKAEEESAAQIGEEHSSD 120
           L LLLIPS  FLA KKSDS Q        IS A HLFD+KPQ   EE SAAQIGEE SSD
Sbjct: 61  LILLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLFDEKPQRTVEELSAAQIGEELSSD 120

Query: 121 DETSSSSSQSNNNGGLSSGDFNSDLWMYLDELSRNLPSSEDSSSEDDDSLIEIPLLP--- 180
           D++SS      N G  S GDF SDLWM LDEL RNLP S+DSSSEDDDSLIEIPLLP   
Sbjct: 121 DDSSS------NGGFESGGDFESDLWMCLDELYRNLPFSDDSSSEDDDSLIEIPLLPYSD 180

Query: 181 ------NLNAIRNLETCLPDLLPDSVLRQHGFVELLEEINEEDNLIEIDISKGFNRFSAV 217
                 N   +RNLETCLPDLLPDSVL+Q+GFVELLEEINEEDNLIEIDIS+GFNR S V
Sbjct: 181 AIRTDSNRELVRNLETCLPDLLPDSVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTV 236

[Close]

BLAST of Lsi02G018350 vs. ExPASy TrEMBL
Match: A0A5D3C7W2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00700 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.9e-69
Identity = 167/222 (75.23%), Postives = 180/222 (81.08%), Query Frame = 0


Query: 1   MEKFTDHCSSLCSSSSLSSSFTQSRLNVAIVSTLLASICFL-SLRFSPSFLT-LLLLLIP 60
           MEKFT HCSSL SSSS    FTQSR N+ I STLLASI FL +LRFSPSF T LLLLL+P
Sbjct: 1   MEKFTPHCSSLTSSSSF---FTQSRFNLPIFSTLLASIFFLITLRFSPSFFTLLLLLLVP 60

Query: 61  STLFLAKKKSDSLQISAADHLFDQKPQTKAEEESAAQIGEEHSSDDETS-SSSSQSNNNG 120
           +TLFLA +KS SL      HLFD+K  T   +ESA  IGE  SSDDETS SSSS S+N+G
Sbjct: 61  ATLFLANRKSYSLD----HHLFDEKSHTTPIQESATHIGEHSSSDDETSCSSSSNSSNDG 120

Query: 121 GLSSGDFNSDLWMYLDELSRNLPSSEDSSS---EDDDSLIEIPLLPNLNAIRNLETCLPD 180
           GL SGDF SDLWM+LDEL+RNLP SED SS   +DDDSLIEIPLLPN N IRNLETCLP+
Sbjct: 121 GLGSGDFKSDLWMHLDELTRNLPLSEDYSSSEDDDDDSLIEIPLLPNSNGIRNLETCLPN 180

Query: 181 LLPDSVLRQHGFVELLEEINEEDNLIEIDISKGFNRFSAVCN 217
           LLPDSVLRQHGFVELLEEINEEDNLIEIDISKGFNRFS VCN
Sbjct: 181 LLPDSVLRQHGFVELLEEINEEDNLIEIDISKGFNRFSTVCN 215

[Close]

BLAST of Lsi02G018350 vs. ExPASy TrEMBL
Match: A0A0A0K6W9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G101780 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 8.5e-69
Identity = 163/220 (74.09%), Postives = 177/220 (80.45%), Query Frame = 0


Query: 1   MEKFTDHCSSLCSSSSLSSSFTQSRLNVAIVSTLLASICFLSLRFSPSFLT-LLLLLIPS 60
           MEKFT HCSSL SSSS    FTQSR N+ I STLLASI FL+LRFSPSF T LLLLLIP+
Sbjct: 1   MEKFTTHCSSLTSSSSF---FTQSRFNLPIFSTLLASIFFLTLRFSPSFFTLLLLLLIPA 60

Query: 61  TLFLAKKKSDSLQISAADHLFDQKPQTKAEEESAAQIGEEHSSDDETSSSSSQSNNNGGL 120
            LF+A KKS+ L      HLFD+ PQT   +ES  QIG+  SSDDETS SS  S+N+GGL
Sbjct: 61  ILFIANKKSNPLY----HHLFDENPQTTPIQESTTQIGQHISSDDETSCSS--SSNDGGL 120

Query: 121 SSGDFNSDLWMYLDELSRNLPSSEDSSS---EDDDSLIEIPLLPNLNAIRNLETCLPDLL 180
            SGDF SDLWM+LDEL+RNLP SED SS   +DDDSLIEIPLLPN N IRNLETCLP+LL
Sbjct: 121 GSGDFKSDLWMHLDELTRNLPLSEDYSSSEDDDDDSLIEIPLLPNSNGIRNLETCLPNLL 180

Query: 181 PDSVLRQHGFVELLEEINEEDNLIEIDISKGFNRFSAVCN 217
           PDSVLRQHGFVELLEEINEEDNLIEIDISKGFNRF  VCN
Sbjct: 181 PDSVLRQHGFVELLEEINEEDNLIEIDISKGFNRFPTVCN 211

[Close]

BLAST of Lsi02G018350 vs. ExPASy TrEMBL
Match: A0A2N9IRF2 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55294 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.4e-07
Identity = 79/229 (34.50%), Postives = 112/229 (48.91%), Query Frame = 0


Query: 24  SRLNVAIVSTLLASICFLSLRFSPSFLTLLLLLIPSTLF---LAKKK--SDSLQISAADH 83
           S L VA++   L    F+S  FSP+ L  + +L+ STLF   L+KKK   D   +     
Sbjct: 7   SLLCVAVLVPSLVFAYFVSFGFSPTSLVTIPILVLSTLFVVTLSKKKVILDENPVQDEGL 66

Query: 84  LFDQK--------------PQTKAEEESAAQIGEEH----------SSDDETSSSSSQSN 143
           + DQK              PQ   E     ++ +E+           S  +T   S   +
Sbjct: 67  ICDQKDLLGNKVGQTQTQTPQPLLETAIQPEVAQENEVGVMHEYKVESPPDTPFPSDSES 126

Query: 144 NNGGLSSGDFNSDLWMYLDELSRNLPSSEDS-SSEDDDSLIEIPLLPNLNA------IRN 203
           +N  L    F  +L M  + + +NL  S+ S S EDDDSLIEI L  + +        + 
Sbjct: 127 SNDSLIGESFEVNL-MCSNHMEQNLAFSDGSVSDEDDDSLIEICLPGSKSGGLDEEPKQK 186

Query: 204 LETCLPDLLPDSVLRQHGFVELLEEI---NEEDNLIEIDISKGFNRFSA 214
            ++ LPDLLP+S+ +Q G +ELL EI   NEE+NLIEID+S G N F A
Sbjct: 187 AQSNLPDLLPESIFQQQGLMELLAEINEMNEEENLIEIDLSMGSNLFKA 234

[Close]

BLAST of Lsi02G018350 vs. NCBI nr
Match: XP_022981598.1 (uncharacterized protein LOC111480668 [Cucurbita maxima] >XP_022981599.1 uncharacterized protein LOC111480668 [Cucurbita maxima])

HSP 1 Score: 280.4 bits (716), Expect = 1.3e-71
Identity = 172/237 (72.57%), Postives = 184/237 (77.64%), Query Frame = 0


Query: 1   MEKFTDHCSSLCSS----SSLSSSFTQSRLNVAIVSTLLASICFLSLRFSPSFLTLLLLL 60
           MEKFTDHC+SLCSS    SS SSS  QSRLNV +VSTLLASICFLSLRFSPSFL+LLLLL
Sbjct: 1   MEKFTDHCASLCSSSSPPSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLSLLLLL 60

Query: 61  IPSTLFLAKKKSDSLQ--------ISAADHLFDQKPQTKAEEESAAQIGEEHSSDDETSS 120
           IPS  FLA KKSDS Q        IS A HLFD+KPQ   EE SAAQIGEE SSDD++SS
Sbjct: 61  IPSFFFLANKKSDSSQISDRNPLLISTAGHLFDEKPQRTVEELSAAQIGEELSSDDDSSS 120

Query: 121 SSSQSNNNGGLSSGDFNSDLWMYLDELSRNLPSSEDSSSEDDDSLIEIPLLPNLNAI--- 180
                 N G  S GDF SDLWM LDEL+RNLP S+DSSSEDDDSLIEIPLLP  +AI   
Sbjct: 121 ------NGGFESGGDFESDLWMCLDELARNLPFSDDSSSEDDDSLIEIPLLPYSDAIRTD 180

Query: 181 ------RNLETCLPDLLPDSVLRQHGFVELLEEINEEDNLIEIDISKGFNRFSAVCN 217
                 RNLETCLPDLLPDSVL+Q+GFVELLEEINEEDNLIEIDIS+GFNR S VCN
Sbjct: 181 SNRALVRNLETCLPDLLPDSVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN 231

[Close]

BLAST of Lsi02G018350 vs. NCBI nr
Match: KAG6607751.1 (hypothetical protein SDJN03_01093, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 273.9 bits (699), Expect = 1.2e-69
Identity = 171/244 (70.08%), Postives = 183/244 (75.00%), Query Frame = 0


Query: 1   MEKFTDHCSSLC----------SSSSLSSSFTQSRLNVAIVSTLLASICFLSLRFSPSFL 60
           MEKFTDHC+SLC          SSSS SSS  QSRLNV +VSTLLASICFLSLRFSPSFL
Sbjct: 1   MEKFTDHCASLCSSSSPPPPSSSSSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFL 60

Query: 61  TLL-LLLIPSTLFLAKKKSDSLQ--------ISAADHLFDQKPQTKAEEESAAQIGEEHS 120
           +LL LLLIPS  FLA KKSDS Q        IS A HLFD+KPQ   EE SAAQIGEE S
Sbjct: 61  SLLILLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLFDEKPQRTVEELSAAQIGEELS 120

Query: 121 SDDETSSSSSQSNNNGGLSSGDFNSDLWMYLDELSRNLPSSEDSSSEDDDSLIEIPLLP- 180
           SDD++SS      N G  S GDF SDLWM LDEL+RNLP S+DSSSEDDDSLIEIPLLP 
Sbjct: 121 SDDDSSS------NGGFESGGDFESDLWMCLDELARNLPFSDDSSSEDDDSLIEIPLLPY 180

Query: 181 --------NLNAIRNLETCLPDLLPDSVLRQHGFVELLEEINEEDNLIEIDISKGFNRFS 217
                   N   +RNLETCLPDLLPDSVL+Q+GFVELLEEINEEDNLIEIDIS+GFNR S
Sbjct: 181 SDAIRTDSNRELVRNLETCLPDLLPDSVLKQNGFVELLEEINEEDNLIEIDISRGFNRVS 238

[Close]

BLAST of Lsi02G018350 vs. NCBI nr
Match: XP_023524760.1 (uncharacterized protein LOC111788599 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 273.5 bits (698), Expect = 1.6e-69
Identity = 171/242 (70.66%), Postives = 182/242 (75.21%), Query Frame = 0


Query: 1   MEKFTDHCSSLCS--------SSSLSSSFTQSRLNVAIVSTLLASICFLSLRFSPSFLT- 60
           MEKFTDHC+SLCS        SSS SSS  QSRLNV +VSTLLASICFLSLRFSPSFLT 
Sbjct: 1   MEKFTDHCASLCSSSSPPPPPSSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLTL 60

Query: 61  LLLLLIPSTLFLAKKKSDSLQ--------ISAADHLFDQKPQTKAEEESAAQIGEEHSSD 120
           LLLLLIPS  FLA KKSDS Q        IS A HLFD+KPQ   EE SAAQIGEE SSD
Sbjct: 61  LLLLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLFDEKPQRTVEELSAAQIGEELSSD 120

Query: 121 DETSSSSSQSNNNGGLSSGDFNSDLWMYLDELSRNLPSSEDSSSEDDDSLIEIPLLP--- 180
           D++SS      N G  S GDF SDLWM LDEL+ NLP S+DSSSEDDDSLIEIPLLP   
Sbjct: 121 DDSSS------NGGFESGGDFESDLWMCLDELALNLPFSDDSSSEDDDSLIEIPLLPYSD 180

Query: 181 ------NLNAIRNLETCLPDLLPDSVLRQHGFVELLEEINEEDNLIEIDISKGFNRFSAV 217
                 N   +RNLETCLPDLLPDSVL+Q+GFVELLEEINEEDNLIEIDIS+GFNR S V
Sbjct: 181 AIRTDSNRELVRNLETCLPDLLPDSVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTV 236

[Close]

BLAST of Lsi02G018350 vs. NCBI nr
Match: XP_022941469.1 (uncharacterized protein LOC111446758 [Cucurbita moschata] >XP_022941470.1 uncharacterized protein LOC111446758 [Cucurbita moschata])

HSP 1 Score: 273.5 bits (698), Expect = 1.6e-69
Identity = 171/242 (70.66%), Postives = 182/242 (75.21%), Query Frame = 0


Query: 1   MEKFTDHCSSLC--------SSSSLSSSFTQSRLNVAIVSTLLASICFLSLRFSPSFLTL 60
           MEKFTDHC+SLC        SSSS SSS  QSRLNV +VSTLLASICFLSLRFSPSFL+L
Sbjct: 1   MEKFTDHCASLCSSSSPPPSSSSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLSL 60

Query: 61  L-LLLIPSTLFLAKKKSDSLQ--------ISAADHLFDQKPQTKAEEESAAQIGEEHSSD 120
           L LLLIPS  FLA KKSDS Q        IS A HLFD+KPQ   EE SAAQIGEE SSD
Sbjct: 61  LILLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLFDEKPQRTVEELSAAQIGEELSSD 120

Query: 121 DETSSSSSQSNNNGGLSSGDFNSDLWMYLDELSRNLPSSEDSSSEDDDSLIEIPLLP--- 180
           D++SS      N G  S GDF SDLWM LDEL RNLP S+DSSSEDDDSLIEIPLLP   
Sbjct: 121 DDSSS------NGGFESGGDFESDLWMCLDELYRNLPFSDDSSSEDDDSLIEIPLLPYSD 180

Query: 181 ------NLNAIRNLETCLPDLLPDSVLRQHGFVELLEEINEEDNLIEIDISKGFNRFSAV 217
                 N   +RNLETCLPDLLPDSVL+Q+GFVELLEEINEEDNLIEIDIS+GFNR S V
Sbjct: 181 AIRTDSNRELVRNLETCLPDLLPDSVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTV 236

[Close]

BLAST of Lsi02G018350 vs. NCBI nr
Match: TYK07951.1 (hypothetical protein E5676_scaffold265G00700 [Cucumis melo var. makuwa])

HSP 1 Score: 271.6 bits (693), Expect = 6.0e-69
Identity = 167/222 (75.23%), Postives = 180/222 (81.08%), Query Frame = 0


Query: 1   MEKFTDHCSSLCSSSSLSSSFTQSRLNVAIVSTLLASICFL-SLRFSPSFLT-LLLLLIP 60
           MEKFT HCSSL SSSS    FTQSR N+ I STLLASI FL +LRFSPSF T LLLLL+P
Sbjct: 1   MEKFTPHCSSLTSSSSF---FTQSRFNLPIFSTLLASIFFLITLRFSPSFFTLLLLLLVP 60

Query: 61  STLFLAKKKSDSLQISAADHLFDQKPQTKAEEESAAQIGEEHSSDDETS-SSSSQSNNNG 120
           +TLFLA +KS SL      HLFD+K  T   +ESA  IGE  SSDDETS SSSS S+N+G
Sbjct: 61  ATLFLANRKSYSLD----HHLFDEKSHTTPIQESATHIGEHSSSDDETSCSSSSNSSNDG 120

Query: 121 GLSSGDFNSDLWMYLDELSRNLPSSEDSSS---EDDDSLIEIPLLPNLNAIRNLETCLPD 180
           GL SGDF SDLWM+LDEL+RNLP SED SS   +DDDSLIEIPLLPN N IRNLETCLP+
Sbjct: 121 GLGSGDFKSDLWMHLDELTRNLPLSEDYSSSEDDDDDSLIEIPLLPNSNGIRNLETCLPN 180

Query: 181 LLPDSVLRQHGFVELLEEINEEDNLIEIDISKGFNRFSAVCN 217
           LLPDSVLRQHGFVELLEEINEEDNLIEIDISKGFNRFS VCN
Sbjct: 181 LLPDSVLRQHGFVELLEEINEEDNLIEIDISKGFNRFSTVCN 215

The following BLAST results are available for this feature:

BLAST of Lsi02G018350 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi02G018350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J2I9	6.3e-72	72.57	uncharacterized protein LOC111480668 OS=Cucurbita maxima OX=3661 GN=LOC111480668...	[more]
A0A6J1FNF5	7.7e-70	70.66	uncharacterized protein LOC111446758 OS=Cucurbita moschata OX=3662 GN=LOC1114467...	[more]
A0A5D3C7W2	2.9e-69	75.23	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0K6W9	8.5e-69	74.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G101780 PE=4 SV=1	[more]
A0A2N9IRF2	2.4e-07	34.50	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55294 PE=4 SV=1	[more]

BLAST of Lsi02G018350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022981598.1	1.3e-71	72.57	uncharacterized protein LOC111480668 [Cucurbita maxima] >XP_022981599.1 uncharac...	[more]
KAG6607751.1	1.2e-69	70.08	hypothetical protein SDJN03_01093, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023524760.1	1.6e-69	70.66	uncharacterized protein LOC111788599 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022941469.1	1.6e-69	70.66	uncharacterized protein LOC111446758 [Cucurbita moschata] >XP_022941470.1 unchar...	[more]
TYK07951.1	6.0e-69	75.23	hypothetical protein E5676_scaffold265G00700 [Cucumis melo var. makuwa]	[more]

BLAST of Lsi02G018350 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..105
None	No IPR available	PANTHER	PTHR35708	GB\|AAD25831.1	coord: 12..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G018350.1	Lsi02G018350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane