Lsi02G018290 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi02G018290
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCleavage and polyadenylation specificity factor subunit 6
Locationchr02: 24111816 .. 24113948 (+)
RNA-Seq ExpressionLsi02G018290
SyntenyLsi02G018290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGAAGGTGAGGGTGTGGATCAGATTGATCAGTTTCATCGGAACGAGGCTATTTCAGCCGTTGCTGATGATGGTTTCTTGGGCGAAGACGAGGATGAATACGAAGACCTGTATAACGATGTTAATGTTGGGGAGGGGTTCCTTCAGTCGTTGAGAAAGAACGATGATTTGGGATTCAAGAGCGAGGAGGAGCCCAAGATGGAGCCTCCTGCACCTGTACCACCCAGTTCCGGTGCTCCCATACCTGGTGTTGGTGGAGGTGCGACTGAAGTTGCTCGTTTAAGAGATGGTGGACACAGTGTTTCGGAGAGAGTAACCGAAGTTTACAATCAGATTCCAGATTTAAAAACGAATGAAATGGCTATCAGAGGTGTGGTGGGATCGGGGCCGCCTGTAGCCGGCGGAGGTGGGATTAGGGTTGAATTAGGGCAAGGAAGTAAAACAAATGAGTTGGAGGAACGAAGTAGTAATAACGTAGCTGCGCATCAGGCTCAACATCAGCAACAGCCACAGCCACAGCCGCAGCCGCAGCCGCAGCAGCAGCACCACCAACCACCTCAGAGCGGAGTCCTAGGAAATCCTGTGAGTGTAGAAAATGAAGGTTTGCTAAGGCAAGGTGGTGGAGTAAATGTAAATGGGGTTGGTGGAAATGGGTTCGGTAATATGGGGAGTGCAGGGGGAGGTGGCGGTGGTACGATTTTGTTTGTTGGTGATTTGCATTGGTGGACTACAGATGCGGAGCTGGAGGTGGAACTCTGTAAGTATGGCCCGTTGAAGGAGGTCAAGTTTTATGACGAGAAAGCCAGTGGAAAATCAAAAGGCTACTGCCAGGTTGAGTTTTATGATCCTTCTGCTGCGACAGCTTGCAAGGAAGGAATGAATGGGCATATTTTTAATGGACGACCATGTGTTGTTGCATATGCATCACCGTTTAGTGTTAAGAAGATGGGAGAAGCCCAAGTGAATAGGAACCAACAGATGGCCCAAGCTACTAATCCTCAAGCAAGGAGAGGTCCTAATGATGCTGTAGGTAAAATTGGTGGAAGTAGCATTGCAACGGGTGGTAACTATCAAGGTGGTGATAACAACAGAGGTTCTGGGAGAGGTAATTGGGGAAGAGGTAATGCACATGGAATGGGAGGTCGAGGACCAGCTGGCCCAATGAGGAGTAGGGGTGGTGGGATGGGTGGTAGAGGTATAATGGGAAATGGTGGAAATGGATTTGGCCAAGGAATTGGTGCCACTCCTCCTTTGTTGCATCCGCAATCAATGATGGGTCAAGGTTTTGATCCATCTTTTGGTGCACCCATGGGAAGAATGGGCACATATGGTGGTTTTCCTGGAGCTCCGGCTCCCCCTTTCTCTGGAATTTTATCGTCCTTTCCCCCAGTTGGGGGTGTTGGCCTTCCTGGTGTAGCTCCTCATGTGAACCCAGCATTTTTTGGAAGAGGTATGCCTATGAATGGAATGGGGATGATGCCAACATCGGGTGTTGATGGGCCTAATATGGGAATGTGGTCTGATCCTAGTATGGGTGGATGGGGCGGTGAAGAGCATGGTGGAGGGAGAGCTGGCGAGTCTAGTTATGGAGAAGAAGCTGCTTCTGACCAGCAATATGGTGAAGGCAGTCATGAAAGAGGGGCGTGGGCAAATTCTGCAAAGGAGAAAGATAGAGGCTCCGAGAGGGACTGGTCACAGTCTTCTGATAGAAGGTATCGAGATGAAAGAGATGTTGGATATGATAGAGAGAGGTCTAAAGAAAAAGATCCGGGGCCTGACCATGATTGGCCAGATAGAAGGCCACGTGATGATAGAGATATAGGGCGTGAAAGGGATAAAGATAGGGATCGGGATAGGGATAGAGAACGATCTCGAGATTATGAGCGTGGCCATCACGATCGTGATCGTGAACGTGATAGGGATCGTGACCGTGATAGGTACAAGGAAGATAGGGACAGATATTCTGATCATCATAGGTACAGAGATCGGGAACCAGAGCACGAGGAAGATTGGGAAAGGGGACGGTCATCAAGGACTCATAACAAGTCCCGATTATCACAAGAAGAAGAAAATCGTTCTAGATCAAGGGATGCTGATTATGGGAAGAGGCGGAGGCTTACTTCTGAATAG

mRNA sequence

ATGGACGAAGGTGAGGGTGTGGATCAGATTGATCAGTTTCATCGGAACGAGGCTATTTCAGCCGTTGCTGATGATGGTTTCTTGGGCGAAGACGAGGATGAATACGAAGACCTGTATAACGATGTTAATGTTGGGGAGGGGTTCCTTCAGTCGTTGAGAAAGAACGATGATTTGGGATTCAAGAGCGAGGAGGAGCCCAAGATGGAGCCTCCTGCACCTGTACCACCCAGTTCCGGTGCTCCCATACCTGGTGTTGGTGGAGGTGCGACTGAAGTTGCTCGTTTAAGAGATGGTGGACACAGTGTTTCGGAGAGAGTAACCGAAGTTTACAATCAGATTCCAGATTTAAAAACGAATGAAATGGCTATCAGAGGTGTGGTGGGATCGGGGCCGCCTGTAGCCGGCGGAGGTGGGATTAGGGTTGAATTAGGGCAAGGAAGTAAAACAAATGAGTTGGAGGAACGAAGTAGTAATAACGTAGCTGCGCATCAGGCTCAACATCAGCAACAGCCACAGCCACAGCCGCAGCCGCAGCCGCAGCAGCAGCACCACCAACCACCTCAGAGCGGAGTCCTAGGAAATCCTGTGAGTGTAGAAAATGAAGGTTTGCTAAGGCAAGGTGGTGGAGTAAATGTAAATGGGGTTGGTGGAAATGGGTTCGGTAATATGGGGAGTGCAGGGGGAGGTGGCGGTGGTACGATTTTGTTTGTTGGTGATTTGCATTGGTGGACTACAGATGCGGAGCTGGAGGTGGAACTCTGTAAGTATGGCCCGTTGAAGGAGGTCAAGTTTTATGACGAGAAAGCCAGTGGAAAATCAAAAGGCTACTGCCAGGTTGAGTTTTATGATCCTTCTGCTGCGACAGCTTGCAAGGAAGGAATGAATGGGCATATTTTTAATGGACGACCATGTGTTGTTGCATATGCATCACCGTTTAGTGTTAAGAAGATGGGAGAAGCCCAAGTGAATAGGAACCAACAGATGGCCCAAGCTACTAATCCTCAAGCAAGGAGAGGTCCTAATGATGCTGTAGGTAAAATTGGTGGAAGTAGCATTGCAACGGGTGGTAACTATCAAGGTGGTGATAACAACAGAGGTTCTGGGAGAGGTAATTGGGGAAGAGGTAATGCACATGGAATGGGAGGTCGAGGACCAGCTGGCCCAATGAGGAGTAGGGGTGGTGGGATGGGTGGTAGAGGTATAATGGGAAATGGTGGAAATGGATTTGGCCAAGGAATTGGTGCCACTCCTCCTTTGTTGCATCCGCAATCAATGATGGGTCAAGGTTTTGATCCATCTTTTGGTGCACCCATGGGAAGAATGGGCACATATGGTGGTTTTCCTGGAGCTCCGGCTCCCCCTTTCTCTGGAATTTTATCGTCCTTTCCCCCAGTTGGGGGTGTTGGCCTTCCTGGTGTAGCTCCTCATGTGAACCCAGCATTTTTTGGAAGAGGTATGCCTATGAATGGAATGGGGATGATGCCAACATCGGGTGTTGATGGGCCTAATATGGGAATGTGGTCTGATCCTAGTATGGGTGGATGGGGCGGTGAAGAGCATGGTGGAGGGAGAGCTGGCGAGTCTAGTTATGGAGAAGAAGCTGCTTCTGACCAGCAATATGGTGAAGGCAGTCATGAAAGAGGGGCGTGGGCAAATTCTGCAAAGGAGAAAGATAGAGGCTCCGAGAGGGACTGGTCACAGTCTTCTGATAGAAGGTATCGAGATGAAAGAGATGTTGGATATGATAGAGAGAGGTCTAAAGAAAAAGATCCGGGGCCTGACCATGATTGGCCAGATAGAAGGCCACGTGATGATAGAGATATAGGGCGTGAAAGGGATAAAGATAGGGATCGGGATAGGGATAGAGAACGATCTCGAGATTATGAGCGTGGCCATCACGATCGTGATCGTGAACGTGATAGGGATCGTGACCGTGATAGGTACAAGGAAGATAGGGACAGATATTCTGATCATCATAGGTACAGAGATCGGGAACCAGAGCACGAGGAAGATTGGGAAAGGGGACGGTCATCAAGGACTCATAACAAGTCCCGATTATCACAAGAAGAAGAAAATCGTTCTAGATCAAGGGATGCTGATTATGGGAAGAGGCGGAGGCTTACTTCTGAATAG

Coding sequence (CDS)

ATGGACGAAGGTGAGGGTGTGGATCAGATTGATCAGTTTCATCGGAACGAGGCTATTTCAGCCGTTGCTGATGATGGTTTCTTGGGCGAAGACGAGGATGAATACGAAGACCTGTATAACGATGTTAATGTTGGGGAGGGGTTCCTTCAGTCGTTGAGAAAGAACGATGATTTGGGATTCAAGAGCGAGGAGGAGCCCAAGATGGAGCCTCCTGCACCTGTACCACCCAGTTCCGGTGCTCCCATACCTGGTGTTGGTGGAGGTGCGACTGAAGTTGCTCGTTTAAGAGATGGTGGACACAGTGTTTCGGAGAGAGTAACCGAAGTTTACAATCAGATTCCAGATTTAAAAACGAATGAAATGGCTATCAGAGGTGTGGTGGGATCGGGGCCGCCTGTAGCCGGCGGAGGTGGGATTAGGGTTGAATTAGGGCAAGGAAGTAAAACAAATGAGTTGGAGGAACGAAGTAGTAATAACGTAGCTGCGCATCAGGCTCAACATCAGCAACAGCCACAGCCACAGCCGCAGCCGCAGCCGCAGCAGCAGCACCACCAACCACCTCAGAGCGGAGTCCTAGGAAATCCTGTGAGTGTAGAAAATGAAGGTTTGCTAAGGCAAGGTGGTGGAGTAAATGTAAATGGGGTTGGTGGAAATGGGTTCGGTAATATGGGGAGTGCAGGGGGAGGTGGCGGTGGTACGATTTTGTTTGTTGGTGATTTGCATTGGTGGACTACAGATGCGGAGCTGGAGGTGGAACTCTGTAAGTATGGCCCGTTGAAGGAGGTCAAGTTTTATGACGAGAAAGCCAGTGGAAAATCAAAAGGCTACTGCCAGGTTGAGTTTTATGATCCTTCTGCTGCGACAGCTTGCAAGGAAGGAATGAATGGGCATATTTTTAATGGACGACCATGTGTTGTTGCATATGCATCACCGTTTAGTGTTAAGAAGATGGGAGAAGCCCAAGTGAATAGGAACCAACAGATGGCCCAAGCTACTAATCCTCAAGCAAGGAGAGGTCCTAATGATGCTGTAGGTAAAATTGGTGGAAGTAGCATTGCAACGGGTGGTAACTATCAAGGTGGTGATAACAACAGAGGTTCTGGGAGAGGTAATTGGGGAAGAGGTAATGCACATGGAATGGGAGGTCGAGGACCAGCTGGCCCAATGAGGAGTAGGGGTGGTGGGATGGGTGGTAGAGGTATAATGGGAAATGGTGGAAATGGATTTGGCCAAGGAATTGGTGCCACTCCTCCTTTGTTGCATCCGCAATCAATGATGGGTCAAGGTTTTGATCCATCTTTTGGTGCACCCATGGGAAGAATGGGCACATATGGTGGTTTTCCTGGAGCTCCGGCTCCCCCTTTCTCTGGAATTTTATCGTCCTTTCCCCCAGTTGGGGGTGTTGGCCTTCCTGGTGTAGCTCCTCATGTGAACCCAGCATTTTTTGGAAGAGGTATGCCTATGAATGGAATGGGGATGATGCCAACATCGGGTGTTGATGGGCCTAATATGGGAATGTGGTCTGATCCTAGTATGGGTGGATGGGGCGGTGAAGAGCATGGTGGAGGGAGAGCTGGCGAGTCTAGTTATGGAGAAGAAGCTGCTTCTGACCAGCAATATGGTGAAGGCAGTCATGAAAGAGGGGCGTGGGCAAATTCTGCAAAGGAGAAAGATAGAGGCTCCGAGAGGGACTGGTCACAGTCTTCTGATAGAAGGTATCGAGATGAAAGAGATGTTGGATATGATAGAGAGAGGTCTAAAGAAAAAGATCCGGGGCCTGACCATGATTGGCCAGATAGAAGGCCACGTGATGATAGAGATATAGGGCGTGAAAGGGATAAAGATAGGGATCGGGATAGGGATAGAGAACGATCTCGAGATTATGAGCGTGGCCATCACGATCGTGATCGTGAACGTGATAGGGATCGTGACCGTGATAGGTACAAGGAAGATAGGGACAGATATTCTGATCATCATAGGTACAGAGATCGGGAACCAGAGCACGAGGAAGATTGGGAAAGGGGACGGTCATCAAGGACTCATAACAAGTCCCGATTATCACAAGAAGAAGAAAATCGTTCTAGATCAAGGGATGCTGATTATGGGAAGAGGCGGAGGCTTACTTCTGAATAG

Protein sequence

MDEGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKSEEEPKMEPPAPVPPSSGAPIPGVGGGATEVARLRDGGHSVSERVTEVYNQIPDLKTNEMAIRGVVGSGPPVAGGGGIRVELGQGSKTNELEERSSNNVAAHQAQHQQQPQPQPQPQPQQQHHQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGGEEHGGGRAGESSYGEEAASDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDERDVGYDRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHNKSRLSQEEENRSRSRDADYGKRRRLTSE
Homology
BLAST of Lsi02G018290 vs. ExPASy TrEMBL
Match: A0A5D3CC60 (Cleavage and polyadenylation specificity factor subunit 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00770 PE=4 SV=1)

HSP 1 Score: 1241.5 bits (3211), Expect = 0.0e+00
Identity = 661/710 (93.10%), Postives = 678/710 (95.49%), Query Frame = 0

Query: 4   GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKSE 63
           GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKND LGFK E
Sbjct: 9   GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDGLGFKRE 68

Query: 64  EEPKMEPPAPVPPSSGAPIPGVGGGATEVARLRD-GGHSVSERVTEVYNQIPDLKTNEMA 123
           EEPKMEPPAPVPP+SGA IPG+GGGATEV  L D GGH+VSERVTE YNQIPDL+TNEMA
Sbjct: 69  EEPKMEPPAPVPPTSGASIPGIGGGATEVTGLGDAGGHTVSERVTEGYNQIPDLRTNEMA 128

Query: 124 IRGVVGSGPPVAGGGGIRVELGQGSKTNELEERSSNNVAAHQAQHQQQPQPQPQPQPQQQ 183
           IRG  GSGPPV GG GIRVELGQGSK  ELEERSSNNVA HQA   QQPQ QPQPQP Q 
Sbjct: 129 IRGGAGSGPPVGGGVGIRVELGQGSKPIELEERSSNNVAGHQA--PQQPQLQPQPQP-QH 188

Query: 184 HHQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGTILFVGDLHW 243
           HHQPPQSGVLGNP SVENEGLLRQGGGVNVNGVGGNGFGN+GSAGGG GGT+LFVGDLHW
Sbjct: 189 HHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNVGSAGGGSGGTVLFVGDLHW 248

Query: 244 WTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGR 303
           WTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGR
Sbjct: 249 WTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGR 308

Query: 304 PCVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGPNDAVGKIGGSSIATGGNYQGGD 363
           PCVVAYASPFSVKKMGEAQVNRNQQ+AQATNPQARR PNDAVGKIGGSSIATGGNYQGGD
Sbjct: 309 PCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGD 368

Query: 364 NNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGATPPLLHP 423
           NNRGSGRGNWGRGNAHGMGGRGPAGPMR RGGG+GGRGIMGNGGNGFGQGIGATPPLLHP
Sbjct: 369 NNRGSGRGNWGRGNAHGMGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHP 428

Query: 424 QSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFF 483
           QSMMGQGFDPSFGAP+GRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFF
Sbjct: 429 QSMMGQGFDPSFGAPIGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFF 488

Query: 484 GRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGGEEHGGGRAGESSYGEEAASDQQYGE 543
           GRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWG EE GGGRAGESSYGEEA SDQ YGE
Sbjct: 489 GRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEQGGGRAGESSYGEEAGSDQHYGE 548

Query: 544 GSHERGAWANSAKEKDRGSERDWSQSSDRRYRDERDVGYDRERSKEKDPGPDHDWPDRRP 603
           GSHERG WANSAKEKDRGSERDWSQSSDRRYRD+RDVGYDRERSKEKDPGPDHDWPDRRP
Sbjct: 549 GSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDPGPDHDWPDRRP 608

Query: 604 RDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYR 663
           RDDRDIGRERDKDRDRDRDRERSRDYERGHH+RDRER+RDRDRDRYK+DR+RYSDHHRYR
Sbjct: 609 RDDRDIGRERDKDRDRDRDRERSRDYERGHHERDRERERDRDRDRYKDDRERYSDHHRYR 668

Query: 664 DREPEHEEDWERGRSSRT--HNKSRLSQEEENRSRSRDADYGKRRRLTSE 711
           DREPEH+EDWERGRSSRT  H+KSRLSQEEE+RSRSRDADYGKRRRLTSE
Sbjct: 669 DREPEHDEDWERGRSSRTHSHSKSRLSQEEESRSRSRDADYGKRRRLTSE 715

BLAST of Lsi02G018290 vs. ExPASy TrEMBL
Match: A0A6J1F726 (cleavage and polyadenylation specificity factor subunit CG7185-like OS=Cucurbita moschata OX=3662 GN=LOC111442737 PE=4 SV=1)

HSP 1 Score: 1238.4 bits (3203), Expect = 0.0e+00
Identity = 664/730 (90.96%), Postives = 682/730 (93.42%), Query Frame = 0

Query: 1   MDEGE-----GVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGE     G DQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  DDLGFKSEEEPKMEPPAPVPPSSGAPIPGVGGGATEVARLRDGGHSVSERVTEVYNQIPD 120
           DDLGFKSEEEPKMEPPA VPP+SGA IPG GGG T+V  L DGGHSV+ERVTE YNQIPD
Sbjct: 61  DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTEGYNQIPD 120

Query: 121 LKTNEMAIRGVVGSGPPVAGGGGIRVELGQGSKTNELEERSSNNVAAHQAQHQQQPQP-- 180
           L+TNEMAIR   GSGPP+ GGGGIRVELGQGSKTNELEERSSNNVAAHQA  QQQPQP  
Sbjct: 121 LRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQPQPLQ 180

Query: 181 ------QPQPQPQQQ---HHQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNMG 240
                 QPQPQPQQQ   HHQ  Q GVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGN+G
Sbjct: 181 QLQPPAQPQPQPQQQTQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG 240

Query: 241 SA----GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVE 300
           +A    GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKF+DEKASGKSKGYCQVE
Sbjct: 241 NAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE 300

Query: 301 FYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGP 360
           FYDPSAATACKEGMNGH+FNGRPCVVAYASPFSVK+MGEAQVNRNQQMAQATNPQARRGP
Sbjct: 301 FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP 360

Query: 361 NDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRG 420
           ND VGK+GGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMR+RGGGMGGRG
Sbjct: 361 NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG 420

Query: 421 IMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS 480
           IMGNGGNGFGQG+GATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS
Sbjct: 421 IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS 480

Query: 481 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGGEEH 540
           SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWG EEH
Sbjct: 481 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH 540

Query: 541 GGGRAGESSYGEEAASDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDERDVG 600
           GGGRAGESSYGEEA SDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRD     
Sbjct: 541 GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRD----- 600

Query: 601 YDRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERD 660
            DRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRD+ERSRDYERGHHDRDR+RD
Sbjct: 601 -DRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRD 660

Query: 661 RDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHNKSRLSQEEENRSRSRDAD 711
           RDRDRDRYKEDRDRYSDHHRYRDREPEH+EDWERGRSSRTH+KSRL QEEENRSR+RDAD
Sbjct: 661 RDRDRDRYKEDRDRYSDHHRYRDREPEHDEDWERGRSSRTHSKSRLPQEEENRSRTRDAD 720

BLAST of Lsi02G018290 vs. ExPASy TrEMBL
Match: A0A0A0K3G6 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G104800 PE=4 SV=1)

HSP 1 Score: 1236.1 bits (3197), Expect = 0.0e+00
Identity = 656/708 (92.66%), Postives = 674/708 (95.20%), Query Frame = 0

Query: 4   GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKSE 63
           GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRK+DDLGFK E
Sbjct: 9   GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKSDDLGFKRE 68

Query: 64  EEPKMEPPAPVPPSSGAPIPGVGGGATEVARLRD-GGHSVSERVTEVYNQIPDLKTNEMA 123
           EEPKMEPPAPVPPSS A IPG+GGGATEV  L D GG +VSERVTE YNQIPDL+TNEMA
Sbjct: 69  EEPKMEPPAPVPPSSAASIPGIGGGATEVTGLGDAGGRTVSERVTEGYNQIPDLRTNEMA 128

Query: 124 IRGVVGSGPPVAGGGGIRVELGQGSKTNELEERSSNNVAAHQAQHQQQPQPQPQPQPQQQ 183
           IRG VGSGPPV  G GIRVELGQGSK  ELEERSSNNVA HQA  Q QPQPQPQP   Q 
Sbjct: 129 IRGGVGSGPPVGTGVGIRVELGQGSKAIELEERSSNNVAGHQAPPQPQPQPQPQP---QH 188

Query: 184 HHQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGTILFVGDLHW 243
           HHQPPQSGVLGNP SVENEGLLRQGGGVNVNGVGGNGFGN+GSAGGGGGGTILFVGDLHW
Sbjct: 189 HHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNIGSAGGGGGGTILFVGDLHW 248

Query: 244 WTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGR 303
           WTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYD SAATACKEGMNGHIFNGR
Sbjct: 249 WTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDSSAATACKEGMNGHIFNGR 308

Query: 304 PCVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGPNDAVGKIGGSSIATGGNYQGGD 363
           PCVVAYASPFSVKKMGEAQV+RNQQ+AQATNPQARR PN+AVGKIGG+SIATGGNYQGGD
Sbjct: 309 PCVVAYASPFSVKKMGEAQVSRNQQIAQATNPQARRAPNEAVGKIGGNSIATGGNYQGGD 368

Query: 364 NNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGATPPLLHP 423
           NNRGSGRGNWGR NAHGMGGRGPAG MR RGGGMGGRGIMGNGGNGFGQGIGATPPLLHP
Sbjct: 369 NNRGSGRGNWGRSNAHGMGGRGPAGQMRGRGGGMGGRGIMGNGGNGFGQGIGATPPLLHP 428

Query: 424 QSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFF 483
           QSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFF
Sbjct: 429 QSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFF 488

Query: 484 GRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGGEEHGGGRAGESSYGEEAASDQQYGE 543
           GRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWG EE GGGRAGESSYGEEA SDQ YGE
Sbjct: 489 GRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEQGGGRAGESSYGEEAGSDQHYGE 548

Query: 544 GSHERGAWANSAKEKDRGSERDWSQSSDRRYRDERDVGYDRERSKEKDPGPDHDWPDRRP 603
           GSHERG WANSAKEKDRGSERDWSQSSDRRYRD+RDVGYDRERSKEKDPGPDHDWPDRRP
Sbjct: 549 GSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDPGPDHDWPDRRP 608

Query: 604 RDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYR 663
           R+DRDIGRERDKDRDR+RDRERSRDYERGHH+RDRER+RDRDRDRYK+DRD+YSDHHRYR
Sbjct: 609 REDRDIGRERDKDRDRERDRERSRDYERGHHERDRERERDRDRDRYKDDRDKYSDHHRYR 668

Query: 664 DREPEHEEDWERGRSSRTHNKSRLSQEEENRSRSRDADYGKRRRLTSE 711
           DREPEH+EDWERGRSSRTH+KSRLSQEEENRSRSRDADYGKRRRLTSE
Sbjct: 669 DREPEHDEDWERGRSSRTHSKSRLSQEEENRSRSRDADYGKRRRLTSE 713

BLAST of Lsi02G018290 vs. ExPASy TrEMBL
Match: A0A6J1ILS2 (cleavage and polyadenylation specificity factor subunit 6-like OS=Cucurbita maxima OX=3661 GN=LOC111476425 PE=4 SV=1)

HSP 1 Score: 1233.0 bits (3189), Expect = 0.0e+00
Identity = 662/728 (90.93%), Postives = 679/728 (93.27%), Query Frame = 0

Query: 1   MDEGE-----GVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGE     G DQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  DDLGFKSEEEPKMEPPAPVPPSSGAPIPGVGGGATEVARLRDGGHSVSERVTEVYNQIPD 120
           DDLGFKSEEEPKMEPPA VPP+SGA IPG GGG T+V  L DGGHSV+ERVTE YNQIPD
Sbjct: 61  DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTEGYNQIPD 120

Query: 121 LKTNEMAIRGVVGSGPPVAGGGGIRVELGQGSKTNELEERSSNNVAAHQAQHQQQPQPQ- 180
           L+ NEMAIR   GSGPP+ GGGGIRVELGQGSKTNELEERSSNNVAAHQA  QQQPQPQ 
Sbjct: 121 LRANEMAIRVGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPQQQQPQPQQ 180

Query: 181 -----PQPQPQQQ---HHQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNMGSA 240
                 QPQPQQQ   HHQ  Q GVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGN+GSA
Sbjct: 181 QLQPPAQPQPQQQTQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVGSA 240

Query: 241 ----GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFY 300
               GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKF+DEKASGKSKGYCQVEFY
Sbjct: 241 GGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFY 300

Query: 301 DPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGPND 360
           DPSAATACKEGMNGH+FNGRPCVVAYASPFSVK+MGEAQVNRNQQMAQATNPQARRGPND
Sbjct: 301 DPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGPND 360

Query: 361 AVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIM 420
            VGK+GGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMR+RGGGMGGRGIM
Sbjct: 361 TVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIM 420

Query: 421 GNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSF 480
           GNGGNGFGQG+GATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSF
Sbjct: 421 GNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSF 480

Query: 481 PPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGGEEHGG 540
           PPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWG EEHGG
Sbjct: 481 PPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGG 540

Query: 541 GRAGESSYGEEAASDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDERDVGYD 600
           GRAGESSYGEEA SDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRD      D
Sbjct: 541 GRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRD------D 600

Query: 601 RERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRD 660
           RERSKEKD GPDHDWPDRRPRDDRDIGRERDKDRDRDRD+ERSRDYERGHHDRDR+RDRD
Sbjct: 601 RERSKEKDLGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRD 660

Query: 661 RDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHNKSRLSQEEENRSRSRDADYG 711
           RDRDRYKEDRDRYSDHHRYRDREPEH+EDWERGRSSRTH+KSRL QEEENRSR+RDADYG
Sbjct: 661 RDRDRYKEDRDRYSDHHRYRDREPEHDEDWERGRSSRTHSKSRLPQEEENRSRTRDADYG 720

BLAST of Lsi02G018290 vs. ExPASy TrEMBL
Match: A0A6J1CCR1 (cleavage and polyadenylation specificity factor subunit 6 OS=Momordica charantia OX=3673 GN=LOC111010455 PE=4 SV=1)

HSP 1 Score: 1191.8 bits (3082), Expect = 0.0e+00
Identity = 640/711 (90.01%), Postives = 665/711 (93.53%), Query Frame = 0

Query: 4   GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKSE 63
           GEGVDQIDQFHRNEAISAVAD+GFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGF++E
Sbjct: 9   GEGVDQIDQFHRNEAISAVADEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFRNE 68

Query: 64  EE-PKMEPPAPVPPSSGAPIPGVGGGATEVARLRDGGHSVSERVTEVYNQIPDLKTNEMA 123
           EE PK+EPPA + PSSGA IPGVGGGATEVA L DGGHSV ERVTE YNQIPDL+TNEMA
Sbjct: 69  EEPPKIEPPATLAPSSGASIPGVGGGATEVASLGDGGHSVPERVTEGYNQIPDLRTNEMA 128

Query: 124 IRGVVGSGPPVAGGGGIRVELGQGSKTNELEERSSNNVAAHQAQHQQQPQP---QPQPQP 183
           +RG  GSGPP+ GGGGIRVELGQGSKTNELEERSSNNVA HQA  Q QPQP   Q Q QP
Sbjct: 129 MRGGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAVHQAPQQPQPQPQQQQQQQQP 188

Query: 184 QQQHHQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGTILFVGD 243
           QQ HHQP  SGVLGNP SVEN+GLLRQ GGVNVNGVGGNG+GNMGSAGGGGGGTILFVGD
Sbjct: 189 QQHHHQPLHSGVLGNPGSVENDGLLRQ-GGVNVNGVGGNGYGNMGSAGGGGGGTILFVGD 248

Query: 244 LHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIF 303
           LHWWTTDAELEVELCKYGPLKEVKF+DEKASGKSKGYCQVEFYDPSAATACKEGMNGH+F
Sbjct: 249 LHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMNGHVF 308

Query: 304 NGRPCVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGPNDAVGKIGGSSIATGGNYQ 363
           NGRPCVVA+ASPFSVKKMGEAQVNRNQQ+AQA NPQARRGPNDAVGKIGGS+I TGGNYQ
Sbjct: 309 NGRPCVVAFASPFSVKKMGEAQVNRNQQIAQAANPQARRGPNDAVGKIGGSNIQTGGNYQ 368

Query: 364 GGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGATPPL 423
           GGDNNRGSGRGNWGRGNAHGMGGRGPAGPMR+RGGGMGGRGIMGNGGNGFGQGIGATPPL
Sbjct: 369 GGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQGIGATPPL 428

Query: 424 LHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNP 483
           LHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNP
Sbjct: 429 LHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNP 488

Query: 484 AFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGGEEHGGGRAGESSYGEEAASDQQ 543
           AFFGRGMPMNGMGMM  SGVDGPNMGMWSDPSMGGWG EEHGGGRAGESSYGEEA SDQQ
Sbjct: 489 AFFGRGMPMNGMGMMAPSGVDGPNMGMWSDPSMGGWGSEEHGGGRAGESSYGEEAGSDQQ 548

Query: 544 YGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDERDVGYDRERSKEKDPGPDHDWPD 603
           YGEGSH+RG WANSAKEKDRGSERDWSQSSDRRYRD      DRERSKEKDPGPDHDW D
Sbjct: 549 YGEGSHDRGGWANSAKEKDRGSERDWSQSSDRRYRD------DRERSKEKDPGPDHDWQD 608

Query: 604 RRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHH 663
           RRPRDDRD+GRERDK  DRDRDRE SRDYERGH   DR+RDRDRDRDR+KEDRDRYSDHH
Sbjct: 609 RRPRDDRDVGRERDK--DRDRDRELSRDYERGH---DRDRDRDRDRDRHKEDRDRYSDHH 668

Query: 664 RYRDREPEHEEDWERGRSSRTHNKSRLSQEEENRSRSRDADYGKRRRLTSE 711
           RYRDREPEHE++WERGRSSRTH+KSRL QEEE+RSRSRDADYGKRRRLTS+
Sbjct: 669 RYRDREPEHEDEWERGRSSRTHSKSRLPQEEESRSRSRDADYGKRRRLTSD 707

BLAST of Lsi02G018290 vs. NCBI nr
Match: XP_038897335.1 (cleavage and polyadenylation specificity factor subunit 6-like [Benincasa hispida] >XP_038897338.1 cleavage and polyadenylation specificity factor subunit 6-like [Benincasa hispida])

HSP 1 Score: 1270.8 bits (3287), Expect = 0.0e+00
Identity = 670/707 (94.77%), Postives = 682/707 (96.46%), Query Frame = 0

Query: 4   GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKSE 63
           GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFK+ 
Sbjct: 9   GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKT- 68

Query: 64  EEPKMEPPAPVPPSSGAPIPGVGGGATEVARLRDGGHSVSERVTEVYNQIPDLKTNEMAI 123
           EEPKMEPPAP PPSSGA IPGVGGGATEVA L DGGHSVSERVTE YNQIPD++ NEMAI
Sbjct: 69  EEPKMEPPAPAPPSSGASIPGVGGGATEVAGLGDGGHSVSERVTEGYNQIPDIRANEMAI 128

Query: 124 RGVVGSGPPVAGGGGIRVELGQGSKTNELEERSSNNVAAHQAQHQQQPQPQPQPQPQQQH 183
           RG  G GPPV GGGGIRVELGQGSKTNELEERS+NN+AAHQA  QQQPQ Q QPQP Q H
Sbjct: 129 RGGAGPGPPVGGGGGIRVELGQGSKTNELEERSNNNIAAHQAPQQQQPQLQAQPQP-QHH 188

Query: 184 HQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGTILFVGDLHWW 243
           HQPPQSGVLGNP SVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGTILFVGDLHWW
Sbjct: 189 HQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGTILFVGDLHWW 248

Query: 244 TTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRP 303
           TTDAELE ELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRP
Sbjct: 249 TTDAELEAELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRP 308

Query: 304 CVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGPNDAVGKIGGSSIATGGNYQGGDN 363
           CVVAYASPFSVK+MGEAQVNRNQQM+QATNPQARRGPNDAVGKIGGS+IATGGNYQGGDN
Sbjct: 309 CVVAYASPFSVKRMGEAQVNRNQQMSQATNPQARRGPNDAVGKIGGSNIATGGNYQGGDN 368

Query: 364 NRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGATPPLLHPQ 423
           NRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGA PPLLHPQ
Sbjct: 369 NRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGAAPPLLHPQ 428

Query: 424 SMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFG 483
           SMM QGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFG
Sbjct: 429 SMMAQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFG 488

Query: 484 RGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGGEEHGGGRAGESSYGEEAASDQQYGEG 543
           RGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWG EEHGGGRA ESSYGEEA SDQQYGEG
Sbjct: 489 RGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRADESSYGEEAGSDQQYGEG 548

Query: 544 SHERGAWANSAKEKDRGSERDWSQSSDRRYRDERDVGYDRERSKEKDPGPDHDWPDRRPR 603
           SH+RGAWANS KEKDRGSERDWSQSSDRRYRD+RDVGYDRERSKEKDPGPDHDWPDRRPR
Sbjct: 549 SHDRGAWANSTKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDPGPDHDWPDRRPR 608

Query: 604 DDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRD 663
           DDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRD
Sbjct: 609 DDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRD 668

Query: 664 REPEHEEDWERGRSSRTHNKSRLSQEEENRSRSRDADYGKRRRLTSE 711
           REPEHEEDWERGRSSRTH+KSRLSQEEENRSR+RDADYGKRRRLTSE
Sbjct: 669 REPEHEEDWERGRSSRTHSKSRLSQEEENRSRTRDADYGKRRRLTSE 713

BLAST of Lsi02G018290 vs. NCBI nr
Match: XP_038897113.1 (uncharacterized PE-PGRS family protein PE_PGRS46-like [Benincasa hispida])

HSP 1 Score: 1268.1 bits (3280), Expect = 0.0e+00
Identity = 673/707 (95.19%), Postives = 682/707 (96.46%), Query Frame = 0

Query: 4   GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKSE 63
           GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFK+ 
Sbjct: 9   GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKT- 68

Query: 64  EEPKMEPPAPVPPSSGAPIPGVGGGATEVARLRDGGHSVSERVTEVYNQIPDLKTNEMAI 123
           EEPKMEPPAPVPPSSGA IPGVGGGATEVA L DGGHSVSERVTE YNQIPDL+TNEMA+
Sbjct: 69  EEPKMEPPAPVPPSSGASIPGVGGGATEVAGLGDGGHSVSERVTEGYNQIPDLRTNEMAV 128

Query: 124 RGVVGSGPPVAGGGGIRVELGQGSKTNELEERSSNNVAAHQAQHQQQPQPQPQPQPQQQH 183
           RG VGSGPPV GGGGIRVELGQGSKT+ELEERSSNNV AHQAQHQ Q QPQPQPQP Q H
Sbjct: 129 RGGVGSGPPVGGGGGIRVELGQGSKTSELEERSSNNVVAHQAQHQHQQQPQPQPQP-QHH 188

Query: 184 HQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGTILFVGDLHWW 243
           HQPPQSGVLGNP SVENEGLLRQGG +NVNGVGGN FGNMGSAGGGGGGTILFVGDLHWW
Sbjct: 189 HQPPQSGVLGNPGSVENEGLLRQGGVINVNGVGGNAFGNMGSAGGGGGGTILFVGDLHWW 248

Query: 244 TTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRP 303
           TTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRP
Sbjct: 249 TTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRP 308

Query: 304 CVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGPNDAVGKIGGSSIATGGNYQGGDN 363
           CVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGPNDAVGKIGGSSIATGGNYQGGDN
Sbjct: 309 CVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGPNDAVGKIGGSSIATGGNYQGGDN 368

Query: 364 NRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGATPPLLHPQ 423
           NRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGATPPLLHPQ
Sbjct: 369 NRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGATPPLLHPQ 428

Query: 424 SMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFG 483
           SMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFG
Sbjct: 429 SMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFG 488

Query: 484 RGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGGEEHGGGRAGESSYGEEAASDQQYGEG 543
           RGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWG EEHGGGRAGESSYGEEA SDQQYGEG
Sbjct: 489 RGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRAGESSYGEEAGSDQQYGEG 548

Query: 544 SHERGAWANSAKEKDRGSERDWSQSSDRRYRDERDVGYDRERSKEKDPGPDHDWPDRRPR 603
           SHERGAWANSAKEKDRGSERDWSQSSDRRYRD      DRERSKEKDPGPDHDWPDRRPR
Sbjct: 549 SHERGAWANSAKEKDRGSERDWSQSSDRRYRD------DRERSKEKDPGPDHDWPDRRPR 608

Query: 604 DDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRD 663
           DDRDIGRERDKDRDRDRDRERSRDYERGHHDR+R+RDRDRDRDRYKEDRDRY DHHRYRD
Sbjct: 609 DDRDIGRERDKDRDRDRDRERSRDYERGHHDRERDRDRDRDRDRYKEDRDRYFDHHRYRD 668

Query: 664 REPEHEEDWERGRSSRTHNKSRLSQEEENRSRSRDADYGKRRRLTSE 711
           REPEHEEDWERGRSSRTH+KSRLSQ+EENRSRSRD DYGKRRRLTSE
Sbjct: 669 REPEHEEDWERGRSSRTHSKSRLSQDEENRSRSRDVDYGKRRRLTSE 707

BLAST of Lsi02G018290 vs. NCBI nr
Match: XP_031744545.1 (cleavage and polyadenylation specificity factor subunit CG7185-like [Cucumis sativus] >XP_031744546.1 cleavage and polyadenylation specificity factor subunit CG7185-like [Cucumis sativus] >KAE8645915.1 hypothetical protein Csa_011894 [Cucumis sativus])

HSP 1 Score: 1244.2 bits (3218), Expect = 0.0e+00
Identity = 662/713 (92.85%), Postives = 680/713 (95.37%), Query Frame = 0

Query: 4   GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKSE 63
           GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRK+DDLGFK E
Sbjct: 9   GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKSDDLGFKRE 68

Query: 64  EEPKMEPPAPVPPSSGAPIPGVGGGATEVARLRD-GGHSVSERVTEVYNQIPDLKTNEMA 123
           EEPKMEPPAPVPPSS A IPG+GGGATEV  L D GG +VSERVTE YNQIPDL+TNEMA
Sbjct: 69  EEPKMEPPAPVPPSSAASIPGIGGGATEVTGLGDAGGRTVSERVTEGYNQIPDLRTNEMA 128

Query: 124 IRGVVGSGPPVAGGGGIRVELGQGSKTNELEERSSNNVAAHQA--QHQQQPQPQPQPQPQ 183
           IRG VGSGPPV  G GIRVELGQGSK  ELEERSSNNVA HQA  Q QQQPQPQPQPQPQ
Sbjct: 129 IRGGVGSGPPVGTGVGIRVELGQGSKAIELEERSSNNVAGHQAPQQQQQQPQPQPQPQPQ 188

Query: 184 ---QQHHQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGTILFV 243
              Q HHQPPQSGVLGNP SVENEGLLRQGGGVNVNGVGGNGFGN+GSAGGGGGGTILFV
Sbjct: 189 PQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNIGSAGGGGGGTILFV 248

Query: 244 GDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGH 303
           GDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGH
Sbjct: 249 GDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGH 308

Query: 304 IFNGRPCVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGPNDAVGKIGGSSIATGGN 363
           IFNGRPCVVAYASPFSVKKMGEAQV+RNQQ+AQATNPQARR PN+AVGKIGG+SIATGGN
Sbjct: 309 IFNGRPCVVAYASPFSVKKMGEAQVSRNQQIAQATNPQARRAPNEAVGKIGGNSIATGGN 368

Query: 364 YQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGATP 423
           YQGGDNNRGSGRGNWGR NAHGMGGRGPAG MR RGGGMGGRGIMGNGGNGFGQGIGATP
Sbjct: 369 YQGGDNNRGSGRGNWGRSNAHGMGGRGPAGQMRGRGGGMGGRGIMGNGGNGFGQGIGATP 428

Query: 424 PLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHV 483
           PLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHV
Sbjct: 429 PLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHV 488

Query: 484 NPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGGEEHGGGRAGESSYGEEAASD 543
           NPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWG EE GGGRAGESSYGEEA SD
Sbjct: 489 NPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEQGGGRAGESSYGEEAGSD 548

Query: 544 QQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDERDVGYDRERSKEKDPGPDHDW 603
           Q YGEGSHERG WANSAKEKDRGSERDWSQSSDRRYRD+RDVGYDRERSKEKDPGPDHDW
Sbjct: 549 QHYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDPGPDHDW 608

Query: 604 PDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSD 663
           PDRRPR+DRDIGRERDKDRDR+RDRERSRDYERGHH+RDRER+RDRDRDRYK+DRD+YSD
Sbjct: 609 PDRRPREDRDIGRERDKDRDRERDRERSRDYERGHHERDRERERDRDRDRYKDDRDKYSD 668

Query: 664 HHRYRDREPEHEEDWERGRSSRTHNKSRLSQEEENRSRSRDADYGKRRRLTSE 711
           HHRYRDREPEH+EDWERGRSSRTH+KSRLSQEEENRSRSRDADYGKRRRLTSE
Sbjct: 669 HHRYRDREPEHDEDWERGRSSRTHSKSRLSQEEENRSRSRDADYGKRRRLTSE 721

BLAST of Lsi02G018290 vs. NCBI nr
Match: TYK07956.1 (cleavage and polyadenylation specificity factor subunit 6 [Cucumis melo var. makuwa])

HSP 1 Score: 1241.5 bits (3211), Expect = 0.0e+00
Identity = 661/710 (93.10%), Postives = 678/710 (95.49%), Query Frame = 0

Query: 4   GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKSE 63
           GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKND LGFK E
Sbjct: 9   GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDGLGFKRE 68

Query: 64  EEPKMEPPAPVPPSSGAPIPGVGGGATEVARLRD-GGHSVSERVTEVYNQIPDLKTNEMA 123
           EEPKMEPPAPVPP+SGA IPG+GGGATEV  L D GGH+VSERVTE YNQIPDL+TNEMA
Sbjct: 69  EEPKMEPPAPVPPTSGASIPGIGGGATEVTGLGDAGGHTVSERVTEGYNQIPDLRTNEMA 128

Query: 124 IRGVVGSGPPVAGGGGIRVELGQGSKTNELEERSSNNVAAHQAQHQQQPQPQPQPQPQQQ 183
           IRG  GSGPPV GG GIRVELGQGSK  ELEERSSNNVA HQA   QQPQ QPQPQP Q 
Sbjct: 129 IRGGAGSGPPVGGGVGIRVELGQGSKPIELEERSSNNVAGHQA--PQQPQLQPQPQP-QH 188

Query: 184 HHQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGTILFVGDLHW 243
           HHQPPQSGVLGNP SVENEGLLRQGGGVNVNGVGGNGFGN+GSAGGG GGT+LFVGDLHW
Sbjct: 189 HHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNVGSAGGGSGGTVLFVGDLHW 248

Query: 244 WTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGR 303
           WTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGR
Sbjct: 249 WTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGR 308

Query: 304 PCVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGPNDAVGKIGGSSIATGGNYQGGD 363
           PCVVAYASPFSVKKMGEAQVNRNQQ+AQATNPQARR PNDAVGKIGGSSIATGGNYQGGD
Sbjct: 309 PCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGD 368

Query: 364 NNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGATPPLLHP 423
           NNRGSGRGNWGRGNAHGMGGRGPAGPMR RGGG+GGRGIMGNGGNGFGQGIGATPPLLHP
Sbjct: 369 NNRGSGRGNWGRGNAHGMGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHP 428

Query: 424 QSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFF 483
           QSMMGQGFDPSFGAP+GRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFF
Sbjct: 429 QSMMGQGFDPSFGAPIGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFF 488

Query: 484 GRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGGEEHGGGRAGESSYGEEAASDQQYGE 543
           GRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWG EE GGGRAGESSYGEEA SDQ YGE
Sbjct: 489 GRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEQGGGRAGESSYGEEAGSDQHYGE 548

Query: 544 GSHERGAWANSAKEKDRGSERDWSQSSDRRYRDERDVGYDRERSKEKDPGPDHDWPDRRP 603
           GSHERG WANSAKEKDRGSERDWSQSSDRRYRD+RDVGYDRERSKEKDPGPDHDWPDRRP
Sbjct: 549 GSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDPGPDHDWPDRRP 608

Query: 604 RDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYR 663
           RDDRDIGRERDKDRDRDRDRERSRDYERGHH+RDRER+RDRDRDRYK+DR+RYSDHHRYR
Sbjct: 609 RDDRDIGRERDKDRDRDRDRERSRDYERGHHERDRERERDRDRDRYKDDRERYSDHHRYR 668

Query: 664 DREPEHEEDWERGRSSRT--HNKSRLSQEEENRSRSRDADYGKRRRLTSE 711
           DREPEH+EDWERGRSSRT  H+KSRLSQEEE+RSRSRDADYGKRRRLTSE
Sbjct: 669 DREPEHDEDWERGRSSRTHSHSKSRLSQEEESRSRSRDADYGKRRRLTSE 715

BLAST of Lsi02G018290 vs. NCBI nr
Match: XP_022936014.1 (cleavage and polyadenylation specificity factor subunit CG7185-like [Cucurbita moschata] >XP_022936015.1 cleavage and polyadenylation specificity factor subunit CG7185-like [Cucurbita moschata])

HSP 1 Score: 1238.4 bits (3203), Expect = 0.0e+00
Identity = 664/730 (90.96%), Postives = 682/730 (93.42%), Query Frame = 0

Query: 1   MDEGE-----GVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGE     G DQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  DDLGFKSEEEPKMEPPAPVPPSSGAPIPGVGGGATEVARLRDGGHSVSERVTEVYNQIPD 120
           DDLGFKSEEEPKMEPPA VPP+SGA IPG GGG T+V  L DGGHSV+ERVTE YNQIPD
Sbjct: 61  DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTEGYNQIPD 120

Query: 121 LKTNEMAIRGVVGSGPPVAGGGGIRVELGQGSKTNELEERSSNNVAAHQAQHQQQPQP-- 180
           L+TNEMAIR   GSGPP+ GGGGIRVELGQGSKTNELEERSSNNVAAHQA  QQQPQP  
Sbjct: 121 LRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQPQPLQ 180

Query: 181 ------QPQPQPQQQ---HHQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNMG 240
                 QPQPQPQQQ   HHQ  Q GVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGN+G
Sbjct: 181 QLQPPAQPQPQPQQQTQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG 240

Query: 241 SA----GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVE 300
           +A    GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKF+DEKASGKSKGYCQVE
Sbjct: 241 NAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE 300

Query: 301 FYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGP 360
           FYDPSAATACKEGMNGH+FNGRPCVVAYASPFSVK+MGEAQVNRNQQMAQATNPQARRGP
Sbjct: 301 FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP 360

Query: 361 NDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRG 420
           ND VGK+GGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMR+RGGGMGGRG
Sbjct: 361 NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG 420

Query: 421 IMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS 480
           IMGNGGNGFGQG+GATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS
Sbjct: 421 IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS 480

Query: 481 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGGEEH 540
           SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWG EEH
Sbjct: 481 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH 540

Query: 541 GGGRAGESSYGEEAASDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDERDVG 600
           GGGRAGESSYGEEA SDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRD     
Sbjct: 541 GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRD----- 600

Query: 601 YDRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERD 660
            DRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRD+ERSRDYERGHHDRDR+RD
Sbjct: 601 -DRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRD 660

Query: 661 RDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHNKSRLSQEEENRSRSRDAD 711
           RDRDRDRYKEDRDRYSDHHRYRDREPEH+EDWERGRSSRTH+KSRL QEEENRSR+RDAD
Sbjct: 661 RDRDRDRYKEDRDRYSDHHRYRDREPEHDEDWERGRSSRTHSKSRLPQEEENRSRTRDAD 720

BLAST of Lsi02G018290 vs. TAIR 10
Match: AT5G55670.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 677.9 bits (1748), Expect = 8.6e-195
Identity = 438/738 (59.35%), Postives = 523/738 (70.87%), Query Frame = 0

Query: 1   MDEGEGVDQIDQFHRNEAISAVADDGFLGEDE-DEYEDLYNDVNVGEGFLQSLRKNDDLG 60
           MDEG+G DQ+DQFH+NEAISAVADDGF+ E+E D+YEDLYNDVNVGEGFLQS++KND+ G
Sbjct: 1   MDEGDGRDQMDQFHQNEAISAVADDGFMAEEEDDDYEDLYNDVNVGEGFLQSMKKNDEAG 60

Query: 61  FKSEEEPK--MEPPAPVPPSSG-----APIPGVGGGATEVARLRDGGHSVSERVTEVYNQ 120
            ++EE+ K  ME    V P  G       IPG+ G + E     + G   S   T+V   
Sbjct: 61  SRNEEKEKVNMEEEDRVEPVLGEAEVSISIPGLVGESVEKEAEAESGGGGSGSGTDVVVA 120

Query: 121 IPDLKTNEMAIRGV---VGSGPPVAGGGGIRVELGQGS-KTNELEERSSNNVAAHQAQHQ 180
                  E+ +  V   +  G     GGG+RVELGQ S + N+LE    NN++       
Sbjct: 121 SSGYGAQEVKVSDVSQEIPGGIGTGTGGGLRVELGQASNRANDLEAPRGNNIS------- 180

Query: 181 QQPQPQPQPQPQQQHHQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGN----GFGNMG 240
              Q    P P   +++     V+GN       G +  G G N+ G G N    G    G
Sbjct: 181 ---QGLLPPPPVLGNNENLMRPVMGNV-----NGGIPPGPGSNMVGNGANIAMPGVVGGG 240

Query: 241 SAGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDP 300
           + GGGGGG  LFVGDLHWWTTDAELE ELCKYG +KEVKF+DEKASGKSKGYCQVEFYDP
Sbjct: 241 TGGGGGGGAFLFVGDLHWWTTDAELEAELCKYGAVKEVKFFDEKASGKSKGYCQVEFYDP 300

Query: 301 SAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRG----- 360
            AA+ACK+ +NG+ FNGRPCVV YASP+SVK+MGEAQVNR QQ AQ+   QA+RG     
Sbjct: 301 VAASACKDALNGYPFNGRPCVVEYASPYSVKRMGEAQVNRTQQ-AQSVIAQAKRGGPADP 360

Query: 361 ---PNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGM 420
              P  A      ++ A GGN+QGG+ NRG GRGNWGRGNA GMGGRGP GPMR+R  GM
Sbjct: 361 PSKPLVANNNNNNNNNAIGGNFQGGE-NRGFGRGNWGRGNAQGMGGRGPGGPMRNRPNGM 420

Query: 421 GGRGIMGNGGNGFGQGIGATPPL-LHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPF 480
           GGRG+MGNG  GFGQG+G  PP+ +  Q MMGQGF+ +FG PM RMG YGGFPGAP P F
Sbjct: 421 GGRGLMGNG--GFGQGMGTGPPMNMMHQPMMGQGFEQAFGGPMARMGGYGGFPGAPGPQF 480

Query: 481 SGILSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVD-GPNMGMWSDPSMGG 540
            G+LSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMP +GVD G NMGMW DP+ GG
Sbjct: 481 PGLLSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPNAGVDGGHNMGMW-DPNSGG 540

Query: 541 WG-GEEHGGGRAGESSYGEEAASDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRY 600
           WG GE+ G GRA ESSYGEEAASD QYGE +HERGA  N  KEK+R SER+WS SSDRR 
Sbjct: 541 WGAGEDLGSGRAAESSYGEEAASDHQYGEVNHERGARPNPVKEKERASEREWSGSSDRRN 600

Query: 601 RDERDVGYDRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHH 660
           R+++D GY+R+  +EKD G  +D P+RR RDDRD GRER+++    +DRERSR+     H
Sbjct: 601 REDKDAGYERDIPREKDVGHGYDMPERRHRDDRDTGREREREH-HHKDRERSRE-----H 660

Query: 661 DRDRERDRDRDRDRYKEDRDRYSDHHRYRDR-EPEHEEDWERGRSSRTHNKSRLSQEEEN 711
            RDRE  R+R+RDR++E+R+RY   HR R R EPEH+E+W RGRSSR HNKSRLS+E+ +
Sbjct: 661 VRDRE--RERERDRHREERERYGGDHRTRHRDEPEHDEEWNRGRSSRGHNKSRLSREDNH 710

BLAST of Lsi02G018290 vs. TAIR 10
Match: AT5G55670.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 455.3 bits (1170), Expect = 9.0e-128
Identity = 343/735 (46.67%), Postives = 418/735 (56.87%), Query Frame = 0

Query: 1   MDEGEGVDQIDQFHRNEAISAVADDGFLGEDE-DEYEDLYNDVNVGEGFLQSLRKNDDLG 60
           MDEG+G DQ+DQFH+NEAISAVADDGF+ E+E D+YEDLYNDVNVGEGFLQS++KND+ G
Sbjct: 1   MDEGDGRDQMDQFHQNEAISAVADDGFMAEEEDDDYEDLYNDVNVGEGFLQSMKKNDEAG 60

Query: 61  FKSEEEPK--MEPPAPVPPSSG-----APIPGVGGGATEVARLRDGGHSVSERVTEVYNQ 120
            ++EE+ K  ME    V P  G       IPG+ G + E     + G   S   T+V   
Sbjct: 61  SRNEEKEKVNMEEEDRVEPVLGEAEVSISIPGLVGESVEKEAEAESGGGGSGSGTDVVVA 120

Query: 121 IPDLKTNEMAIRGV---VGSGPPVAGGGGIRVELGQGS-KTNELEERSSNNVAAHQAQHQ 180
                  E+ +  V   +  G     GGG+RVELGQ S + N+LE    NN++       
Sbjct: 121 SSGYGAQEVKVSDVSQEIPGGIGTGTGGGLRVELGQASNRANDLEAPRGNNIS------- 180

Query: 181 QQPQPQPQPQPQQQHHQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGN----GFGNMG 240
              Q    P P   +++     V+GN       G +  G G N+ G G N    G    G
Sbjct: 181 ---QGLLPPPPVLGNNENLMRPVMGNV-----NGGIPPGPGSNMVGNGANIAMPGVVGGG 240

Query: 241 SAGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDP 300
           + GGGGGG  LFVGDLHWWTTDAELE ELCKYG +KEVKF+DEKASGKSKGYCQVEFYDP
Sbjct: 241 TGGGGGGGAFLFVGDLHWWTTDAELEAELCKYGAVKEVKFFDEKASGKSKGYCQVEFYDP 300

Query: 301 SAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRG----- 360
            AA+ACK+ +NG+ FNGRPCVV YASP+SVK+MGEAQVNR QQ AQ+   QA+RG     
Sbjct: 301 VAASACKDALNGYPFNGRPCVVEYASPYSVKRMGEAQVNRTQQ-AQSVIAQAKRGGPADP 360

Query: 361 ---PNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGM 420
              P  A      ++ A GGN+QGG+ NRG GRGNWGRGNA GMGGRGP GPMR+R  GM
Sbjct: 361 PSKPLVANNNNNNNNNAIGGNFQGGE-NRGFGRGNWGRGNAQGMGGRGPGGPMRNRPNGM 420

Query: 421 GGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFS 480
                                                                       
Sbjct: 421 ------------------------------------------------------------ 480

Query: 481 GILSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWG 540
                                                                       
Sbjct: 481 ------------------------------------------------------------ 540

Query: 541 GEEHGGGRAGESSYGEEAASDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDE 600
                GGRA ESSYGEEAASD QYGE +HERGA  N  KEK+R SER+WS SSDRR R++
Sbjct: 541 -----GGRAAESSYGEEAASDHQYGEVNHERGARPNPVKEKERASEREWSGSSDRRNRED 585

Query: 601 RDVGYDRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHDRD 660
           +D GY+R+  +EKD G  +D P+RR RDDRD GRER+++    +DRERSR+     H RD
Sbjct: 601 KDAGYERDIPREKDVGHGYDMPERRHRDDRDTGREREREH-HHKDRERSRE-----HVRD 585

Query: 661 RERDRDRDRDRYKEDRDRYSDHHRYRDR-EPEHEEDWERGRSSRTHNKSRLSQEEENRSR 711
           RE  R+R+RDR++E+R+RY   HR R R EPEH+E+W RGRSSR HNKSRLS+E+ +RS+
Sbjct: 661 RE--RERERDRHREERERYGGDHRTRHRDEPEHDEEWNRGRSSRGHNKSRLSREDNHRSK 585

BLAST of Lsi02G018290 vs. TAIR 10
Match: AT1G13190.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 239.2 bits (609), Expect = 1.0e-62
Identity = 260/726 (35.81%), Postives = 353/726 (48.62%), Query Frame = 0

Query: 19  ISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKSEEEPKMEPPAPVPPSS 78
           I A+AD+  +G D+DEY+DLY+DVNVGE F           F++  +P  +PPA V  S+
Sbjct: 21  IPALADEELMG-DDDEYDDLYSDVNVGESF-----------FQAHNQP--QPPAQVNTSN 80

Query: 79  GA-----------PIPG-VGGGATEVARLRDGGH---SVSERVTEVYNQIP--------- 138
            +           P  G V GG  E     DGGH   S  +  ++VY Q           
Sbjct: 81  ASLQAQNSHVAAEPRMGIVSGGTVEGKYRNDGGHNGISGPDTRSDVYPQASSFGAKGLNI 140

Query: 139 DLKTNEMAIRGVVGSGPPVAGGGGIRVELGQGSKTNELEERSSNNVAAHQAQHQQQPQPQ 198
           D+++N++A +   GS   V    G       G+  N  E    N+  A     QQ P  Q
Sbjct: 141 DIQSNKIAQQ---GSTTVVLNNHGF-----SGNAVNVPEMPVHNSYGAPPQGAQQIPVSQ 200

Query: 199 PQPQPQ-QQHHQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGT 258
               P    +  P QS V+ N                                    G T
Sbjct: 201 MSVNPNVMMNKSPTQSFVVDN------------------------------------GNT 260

Query: 259 ILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEG 318
           +LFVG+LHWWTTDAE+E  L +YG +KE+KF+DE+ SGKSKGYCQVEFYD +AA ACKEG
Sbjct: 261 MLFVGELHWWTTDAEIESVLSQYGRVKEIKFFDERVSGKSKGYCQVEFYDSAAAAACKEG 320

Query: 319 MNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGPNDAVGKIGGSSIA 378
           MNG IFNG+ CVVA+ASP ++K+MG     RNQ   Q  N   RR  N+ +G+  G++  
Sbjct: 321 MNGFIFNGKACVVAFASPETLKQMGANFTGRNQGQNQIQN---RRPLNEGMGR--GNNNN 380

Query: 379 TGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGI----MGNGGNGF 438
              N Q GD  R  GRG + RG   GMG RG A      GG M GRG+     G+G   +
Sbjct: 381 NNMNTQNGDGGRNYGRGGFARG-GQGMGNRGGAW-----GGAMRGRGVNNMASGSGAGPY 440

Query: 439 GQGIG--ATPPLLHPQSMMGQ-GFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVG 498
           G G+   A   ++HPQ MMG  GFDP+F   MGR   YGG+ G   P   G+  S+P V 
Sbjct: 441 GPGLAGPAFGGMMHPQGMMGAGGFDPTF---MGRGAGYGGYSGIAYP---GMPHSYPGVN 500

Query: 499 GVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPN-MGMWSDPSMGGW--GGEEHGGG 558
            +G+ G+APHVNPAFFG      GMG M +SG++G +   MWS+ + GG   GG E+GG 
Sbjct: 501 AMGMVGIAPHVNPAFFG-----TGMGTMGSSGMNGVHAAAMWSEANGGGGEEGGSEYGG- 560

Query: 559 RAGESSYGEEAASDQQYGEGSHERGAWANSAKEKDRG-SERDWSQSS-DRRYRDERDVGY 618
                 Y +E    ++              +++K+R  +ERDWS++S DRR++  R+   
Sbjct: 561 ------YEDETQEKEE------------KPSRDKERATTERDWSENSGDRRHKSHRE--- 571

Query: 619 DRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDR 678
                                        E+D  R+                        
Sbjct: 621 -----------------------------EKDSHRE------------------------ 571

Query: 679 DRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSS-RTHNKSRLSQEEENRSRSRDAD 707
                 YK+ RDR SD             +++RG+SS ++ ++SR+S E+++RSRSRDAD
Sbjct: 681 ------YKQQRDRDSD-------------EFDRGQSSLKSRSRSRMS-EDDHRSRSRDAD 571

BLAST of Lsi02G018290 vs. TAIR 10
Match: AT5G53440.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 8.2e-04
Identity = 61/158 (38.61%), Postives = 88/158 (55.70%), Query Frame = 0

Query: 552 NSAKEKDRGSERDWSQSSDRRYRDERDVGYDRERSKEKDPGPDHDWPDRRPRDDRDIGRE 611
           + +K+K +  + D     D     E D  ++RER+++ D   D +  DR    DRD   E
Sbjct: 276 DESKKKSKFQDNDHGHEPD----SELDGYHERERNRDYDRESDRNERDRERTRDRDRDYE 335

Query: 612 RDKDRDRDRDRERS---RDYERG-HHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDREPE 671
           RD+DRDRDRDRER    RDYE   +HDRD +RDR RDRDR   D +R   H R +DR  +
Sbjct: 336 RDRDRDRDRDRERDRDRRDYEHDRYHDRDWDRDRSRDRDR---DHERDRTHDREKDRSRD 395

Query: 672 HEEDWERGRSSRTHNKSR-LSQEEENRSRSRDADYGKR 705
           +  D +R +S R  +  R +S+ ++   R +D   G+R
Sbjct: 396 YYHDGKRSKSDRERDNDRDVSRLDDQSGRYKDRRDGRR 426

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CC600.0e+0093.10Cleavage and polyadenylation specificity factor subunit 6 OS=Cucumis melo var. m... [more]
A0A6J1F7260.0e+0090.96cleavage and polyadenylation specificity factor subunit CG7185-like OS=Cucurbita... [more]
A0A0A0K3G60.0e+0092.66RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G104800 PE=4 SV... [more]
A0A6J1ILS20.0e+0090.93cleavage and polyadenylation specificity factor subunit 6-like OS=Cucurbita maxi... [more]
A0A6J1CCR10.0e+0090.01cleavage and polyadenylation specificity factor subunit 6 OS=Momordica charantia... [more]
Match NameE-valueIdentityDescription
XP_038897335.10.0e+0094.77cleavage and polyadenylation specificity factor subunit 6-like [Benincasa hispid... [more]
XP_038897113.10.0e+0095.19uncharacterized PE-PGRS family protein PE_PGRS46-like [Benincasa hispida][more]
XP_031744545.10.0e+0092.85cleavage and polyadenylation specificity factor subunit CG7185-like [Cucumis sat... [more]
TYK07956.10.0e+0093.10cleavage and polyadenylation specificity factor subunit 6 [Cucumis melo var. mak... [more]
XP_022936014.10.0e+0090.96cleavage and polyadenylation specificity factor subunit CG7185-like [Cucurbita m... [more]
Match NameE-valueIdentityDescription
AT5G55670.18.6e-19559.35RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G55670.29.0e-12846.67RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT1G13190.11.0e-6235.81RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G53440.18.2e-0438.61unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 234..307
e-value: 3.7E-19
score: 79.7
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 235..304
e-value: 7.0E-13
score: 48.2
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 233..311
score: 13.361938
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 154..327
e-value: 2.7E-25
score: 90.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..196
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 500..710
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 352..370
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 328..434
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 549..710
NoneNo IPR availablePANTHERPTHR23204:SF9CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6-LIKEcoord: 1..709
NoneNo IPR availableCDDcd12372RRM_CFIm68_CFIm59coord: 235..308
e-value: 3.07873E-33
score: 120.093
IPR034772CPSF6/7 familyPANTHERPTHR23204CLEAVAGE AND POLYADENYLATION SPECIFIC FACTORcoord: 1..709
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 231..319

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G018290.1Lsi02G018290.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding