Homology
BLAST of Lsi02G018290 vs. ExPASy TrEMBL
Match:
A0A5D3CC60 (Cleavage and polyadenylation specificity factor subunit 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00770 PE=4 SV=1)
HSP 1 Score: 1241.5 bits (3211), Expect = 0.0e+00
Identity = 661/710 (93.10%), Postives = 678/710 (95.49%), Query Frame = 0
Query: 4 GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKSE 63
GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKND LGFK E
Sbjct: 9 GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDGLGFKRE 68
Query: 64 EEPKMEPPAPVPPSSGAPIPGVGGGATEVARLRD-GGHSVSERVTEVYNQIPDLKTNEMA 123
EEPKMEPPAPVPP+SGA IPG+GGGATEV L D GGH+VSERVTE YNQIPDL+TNEMA
Sbjct: 69 EEPKMEPPAPVPPTSGASIPGIGGGATEVTGLGDAGGHTVSERVTEGYNQIPDLRTNEMA 128
Query: 124 IRGVVGSGPPVAGGGGIRVELGQGSKTNELEERSSNNVAAHQAQHQQQPQPQPQPQPQQQ 183
IRG GSGPPV GG GIRVELGQGSK ELEERSSNNVA HQA QQPQ QPQPQP Q
Sbjct: 129 IRGGAGSGPPVGGGVGIRVELGQGSKPIELEERSSNNVAGHQA--PQQPQLQPQPQP-QH 188
Query: 184 HHQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGTILFVGDLHW 243
HHQPPQSGVLGNP SVENEGLLRQGGGVNVNGVGGNGFGN+GSAGGG GGT+LFVGDLHW
Sbjct: 189 HHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNVGSAGGGSGGTVLFVGDLHW 248
Query: 244 WTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGR 303
WTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGR
Sbjct: 249 WTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGR 308
Query: 304 PCVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGPNDAVGKIGGSSIATGGNYQGGD 363
PCVVAYASPFSVKKMGEAQVNRNQQ+AQATNPQARR PNDAVGKIGGSSIATGGNYQGGD
Sbjct: 309 PCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGD 368
Query: 364 NNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGATPPLLHP 423
NNRGSGRGNWGRGNAHGMGGRGPAGPMR RGGG+GGRGIMGNGGNGFGQGIGATPPLLHP
Sbjct: 369 NNRGSGRGNWGRGNAHGMGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHP 428
Query: 424 QSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFF 483
QSMMGQGFDPSFGAP+GRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFF
Sbjct: 429 QSMMGQGFDPSFGAPIGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFF 488
Query: 484 GRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGGEEHGGGRAGESSYGEEAASDQQYGE 543
GRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWG EE GGGRAGESSYGEEA SDQ YGE
Sbjct: 489 GRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEQGGGRAGESSYGEEAGSDQHYGE 548
Query: 544 GSHERGAWANSAKEKDRGSERDWSQSSDRRYRDERDVGYDRERSKEKDPGPDHDWPDRRP 603
GSHERG WANSAKEKDRGSERDWSQSSDRRYRD+RDVGYDRERSKEKDPGPDHDWPDRRP
Sbjct: 549 GSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDPGPDHDWPDRRP 608
Query: 604 RDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYR 663
RDDRDIGRERDKDRDRDRDRERSRDYERGHH+RDRER+RDRDRDRYK+DR+RYSDHHRYR
Sbjct: 609 RDDRDIGRERDKDRDRDRDRERSRDYERGHHERDRERERDRDRDRYKDDRERYSDHHRYR 668
Query: 664 DREPEHEEDWERGRSSRT--HNKSRLSQEEENRSRSRDADYGKRRRLTSE 711
DREPEH+EDWERGRSSRT H+KSRLSQEEE+RSRSRDADYGKRRRLTSE
Sbjct: 669 DREPEHDEDWERGRSSRTHSHSKSRLSQEEESRSRSRDADYGKRRRLTSE 715
BLAST of Lsi02G018290 vs. ExPASy TrEMBL
Match:
A0A6J1F726 (cleavage and polyadenylation specificity factor subunit CG7185-like OS=Cucurbita moschata OX=3662 GN=LOC111442737 PE=4 SV=1)
HSP 1 Score: 1238.4 bits (3203), Expect = 0.0e+00
Identity = 664/730 (90.96%), Postives = 682/730 (93.42%), Query Frame = 0
Query: 1 MDEGE-----GVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
MDEGE G DQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1 MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
Query: 61 DDLGFKSEEEPKMEPPAPVPPSSGAPIPGVGGGATEVARLRDGGHSVSERVTEVYNQIPD 120
DDLGFKSEEEPKMEPPA VPP+SGA IPG GGG T+V L DGGHSV+ERVTE YNQIPD
Sbjct: 61 DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTEGYNQIPD 120
Query: 121 LKTNEMAIRGVVGSGPPVAGGGGIRVELGQGSKTNELEERSSNNVAAHQAQHQQQPQP-- 180
L+TNEMAIR GSGPP+ GGGGIRVELGQGSKTNELEERSSNNVAAHQA QQQPQP
Sbjct: 121 LRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQPQPLQ 180
Query: 181 ------QPQPQPQQQ---HHQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNMG 240
QPQPQPQQQ HHQ Q GVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGN+G
Sbjct: 181 QLQPPAQPQPQPQQQTQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG 240
Query: 241 SA----GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVE 300
+A GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKF+DEKASGKSKGYCQVE
Sbjct: 241 NAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE 300
Query: 301 FYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGP 360
FYDPSAATACKEGMNGH+FNGRPCVVAYASPFSVK+MGEAQVNRNQQMAQATNPQARRGP
Sbjct: 301 FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP 360
Query: 361 NDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRG 420
ND VGK+GGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMR+RGGGMGGRG
Sbjct: 361 NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG 420
Query: 421 IMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS 480
IMGNGGNGFGQG+GATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS
Sbjct: 421 IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS 480
Query: 481 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGGEEH 540
SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWG EEH
Sbjct: 481 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH 540
Query: 541 GGGRAGESSYGEEAASDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDERDVG 600
GGGRAGESSYGEEA SDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRD
Sbjct: 541 GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRD----- 600
Query: 601 YDRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERD 660
DRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRD+ERSRDYERGHHDRDR+RD
Sbjct: 601 -DRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRD 660
Query: 661 RDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHNKSRLSQEEENRSRSRDAD 711
RDRDRDRYKEDRDRYSDHHRYRDREPEH+EDWERGRSSRTH+KSRL QEEENRSR+RDAD
Sbjct: 661 RDRDRDRYKEDRDRYSDHHRYRDREPEHDEDWERGRSSRTHSKSRLPQEEENRSRTRDAD 720
BLAST of Lsi02G018290 vs. ExPASy TrEMBL
Match:
A0A0A0K3G6 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G104800 PE=4 SV=1)
HSP 1 Score: 1236.1 bits (3197), Expect = 0.0e+00
Identity = 656/708 (92.66%), Postives = 674/708 (95.20%), Query Frame = 0
Query: 4 GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKSE 63
GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRK+DDLGFK E
Sbjct: 9 GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKSDDLGFKRE 68
Query: 64 EEPKMEPPAPVPPSSGAPIPGVGGGATEVARLRD-GGHSVSERVTEVYNQIPDLKTNEMA 123
EEPKMEPPAPVPPSS A IPG+GGGATEV L D GG +VSERVTE YNQIPDL+TNEMA
Sbjct: 69 EEPKMEPPAPVPPSSAASIPGIGGGATEVTGLGDAGGRTVSERVTEGYNQIPDLRTNEMA 128
Query: 124 IRGVVGSGPPVAGGGGIRVELGQGSKTNELEERSSNNVAAHQAQHQQQPQPQPQPQPQQQ 183
IRG VGSGPPV G GIRVELGQGSK ELEERSSNNVA HQA Q QPQPQPQP Q
Sbjct: 129 IRGGVGSGPPVGTGVGIRVELGQGSKAIELEERSSNNVAGHQAPPQPQPQPQPQP---QH 188
Query: 184 HHQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGTILFVGDLHW 243
HHQPPQSGVLGNP SVENEGLLRQGGGVNVNGVGGNGFGN+GSAGGGGGGTILFVGDLHW
Sbjct: 189 HHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNIGSAGGGGGGTILFVGDLHW 248
Query: 244 WTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGR 303
WTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYD SAATACKEGMNGHIFNGR
Sbjct: 249 WTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDSSAATACKEGMNGHIFNGR 308
Query: 304 PCVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGPNDAVGKIGGSSIATGGNYQGGD 363
PCVVAYASPFSVKKMGEAQV+RNQQ+AQATNPQARR PN+AVGKIGG+SIATGGNYQGGD
Sbjct: 309 PCVVAYASPFSVKKMGEAQVSRNQQIAQATNPQARRAPNEAVGKIGGNSIATGGNYQGGD 368
Query: 364 NNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGATPPLLHP 423
NNRGSGRGNWGR NAHGMGGRGPAG MR RGGGMGGRGIMGNGGNGFGQGIGATPPLLHP
Sbjct: 369 NNRGSGRGNWGRSNAHGMGGRGPAGQMRGRGGGMGGRGIMGNGGNGFGQGIGATPPLLHP 428
Query: 424 QSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFF 483
QSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFF
Sbjct: 429 QSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFF 488
Query: 484 GRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGGEEHGGGRAGESSYGEEAASDQQYGE 543
GRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWG EE GGGRAGESSYGEEA SDQ YGE
Sbjct: 489 GRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEQGGGRAGESSYGEEAGSDQHYGE 548
Query: 544 GSHERGAWANSAKEKDRGSERDWSQSSDRRYRDERDVGYDRERSKEKDPGPDHDWPDRRP 603
GSHERG WANSAKEKDRGSERDWSQSSDRRYRD+RDVGYDRERSKEKDPGPDHDWPDRRP
Sbjct: 549 GSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDPGPDHDWPDRRP 608
Query: 604 RDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYR 663
R+DRDIGRERDKDRDR+RDRERSRDYERGHH+RDRER+RDRDRDRYK+DRD+YSDHHRYR
Sbjct: 609 REDRDIGRERDKDRDRERDRERSRDYERGHHERDRERERDRDRDRYKDDRDKYSDHHRYR 668
Query: 664 DREPEHEEDWERGRSSRTHNKSRLSQEEENRSRSRDADYGKRRRLTSE 711
DREPEH+EDWERGRSSRTH+KSRLSQEEENRSRSRDADYGKRRRLTSE
Sbjct: 669 DREPEHDEDWERGRSSRTHSKSRLSQEEENRSRSRDADYGKRRRLTSE 713
BLAST of Lsi02G018290 vs. ExPASy TrEMBL
Match:
A0A6J1ILS2 (cleavage and polyadenylation specificity factor subunit 6-like OS=Cucurbita maxima OX=3661 GN=LOC111476425 PE=4 SV=1)
HSP 1 Score: 1233.0 bits (3189), Expect = 0.0e+00
Identity = 662/728 (90.93%), Postives = 679/728 (93.27%), Query Frame = 0
Query: 1 MDEGE-----GVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
MDEGE G DQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1 MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
Query: 61 DDLGFKSEEEPKMEPPAPVPPSSGAPIPGVGGGATEVARLRDGGHSVSERVTEVYNQIPD 120
DDLGFKSEEEPKMEPPA VPP+SGA IPG GGG T+V L DGGHSV+ERVTE YNQIPD
Sbjct: 61 DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTEGYNQIPD 120
Query: 121 LKTNEMAIRGVVGSGPPVAGGGGIRVELGQGSKTNELEERSSNNVAAHQAQHQQQPQPQ- 180
L+ NEMAIR GSGPP+ GGGGIRVELGQGSKTNELEERSSNNVAAHQA QQQPQPQ
Sbjct: 121 LRANEMAIRVGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPQQQQPQPQQ 180
Query: 181 -----PQPQPQQQ---HHQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNMGSA 240
QPQPQQQ HHQ Q GVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGN+GSA
Sbjct: 181 QLQPPAQPQPQQQTQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVGSA 240
Query: 241 ----GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFY 300
GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKF+DEKASGKSKGYCQVEFY
Sbjct: 241 GGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFY 300
Query: 301 DPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGPND 360
DPSAATACKEGMNGH+FNGRPCVVAYASPFSVK+MGEAQVNRNQQMAQATNPQARRGPND
Sbjct: 301 DPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGPND 360
Query: 361 AVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIM 420
VGK+GGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMR+RGGGMGGRGIM
Sbjct: 361 TVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIM 420
Query: 421 GNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSF 480
GNGGNGFGQG+GATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSF
Sbjct: 421 GNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSF 480
Query: 481 PPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGGEEHGG 540
PPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWG EEHGG
Sbjct: 481 PPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGG 540
Query: 541 GRAGESSYGEEAASDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDERDVGYD 600
GRAGESSYGEEA SDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRD D
Sbjct: 541 GRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRD------D 600
Query: 601 RERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRD 660
RERSKEKD GPDHDWPDRRPRDDRDIGRERDKDRDRDRD+ERSRDYERGHHDRDR+RDRD
Sbjct: 601 RERSKEKDLGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRD 660
Query: 661 RDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHNKSRLSQEEENRSRSRDADYG 711
RDRDRYKEDRDRYSDHHRYRDREPEH+EDWERGRSSRTH+KSRL QEEENRSR+RDADYG
Sbjct: 661 RDRDRYKEDRDRYSDHHRYRDREPEHDEDWERGRSSRTHSKSRLPQEEENRSRTRDADYG 720
BLAST of Lsi02G018290 vs. ExPASy TrEMBL
Match:
A0A6J1CCR1 (cleavage and polyadenylation specificity factor subunit 6 OS=Momordica charantia OX=3673 GN=LOC111010455 PE=4 SV=1)
HSP 1 Score: 1191.8 bits (3082), Expect = 0.0e+00
Identity = 640/711 (90.01%), Postives = 665/711 (93.53%), Query Frame = 0
Query: 4 GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKSE 63
GEGVDQIDQFHRNEAISAVAD+GFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGF++E
Sbjct: 9 GEGVDQIDQFHRNEAISAVADEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFRNE 68
Query: 64 EE-PKMEPPAPVPPSSGAPIPGVGGGATEVARLRDGGHSVSERVTEVYNQIPDLKTNEMA 123
EE PK+EPPA + PSSGA IPGVGGGATEVA L DGGHSV ERVTE YNQIPDL+TNEMA
Sbjct: 69 EEPPKIEPPATLAPSSGASIPGVGGGATEVASLGDGGHSVPERVTEGYNQIPDLRTNEMA 128
Query: 124 IRGVVGSGPPVAGGGGIRVELGQGSKTNELEERSSNNVAAHQAQHQQQPQP---QPQPQP 183
+RG GSGPP+ GGGGIRVELGQGSKTNELEERSSNNVA HQA Q QPQP Q Q QP
Sbjct: 129 MRGGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAVHQAPQQPQPQPQQQQQQQQP 188
Query: 184 QQQHHQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGTILFVGD 243
QQ HHQP SGVLGNP SVEN+GLLRQ GGVNVNGVGGNG+GNMGSAGGGGGGTILFVGD
Sbjct: 189 QQHHHQPLHSGVLGNPGSVENDGLLRQ-GGVNVNGVGGNGYGNMGSAGGGGGGTILFVGD 248
Query: 244 LHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIF 303
LHWWTTDAELEVELCKYGPLKEVKF+DEKASGKSKGYCQVEFYDPSAATACKEGMNGH+F
Sbjct: 249 LHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMNGHVF 308
Query: 304 NGRPCVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGPNDAVGKIGGSSIATGGNYQ 363
NGRPCVVA+ASPFSVKKMGEAQVNRNQQ+AQA NPQARRGPNDAVGKIGGS+I TGGNYQ
Sbjct: 309 NGRPCVVAFASPFSVKKMGEAQVNRNQQIAQAANPQARRGPNDAVGKIGGSNIQTGGNYQ 368
Query: 364 GGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGATPPL 423
GGDNNRGSGRGNWGRGNAHGMGGRGPAGPMR+RGGGMGGRGIMGNGGNGFGQGIGATPPL
Sbjct: 369 GGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQGIGATPPL 428
Query: 424 LHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNP 483
LHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNP
Sbjct: 429 LHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNP 488
Query: 484 AFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGGEEHGGGRAGESSYGEEAASDQQ 543
AFFGRGMPMNGMGMM SGVDGPNMGMWSDPSMGGWG EEHGGGRAGESSYGEEA SDQQ
Sbjct: 489 AFFGRGMPMNGMGMMAPSGVDGPNMGMWSDPSMGGWGSEEHGGGRAGESSYGEEAGSDQQ 548
Query: 544 YGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDERDVGYDRERSKEKDPGPDHDWPD 603
YGEGSH+RG WANSAKEKDRGSERDWSQSSDRRYRD DRERSKEKDPGPDHDW D
Sbjct: 549 YGEGSHDRGGWANSAKEKDRGSERDWSQSSDRRYRD------DRERSKEKDPGPDHDWQD 608
Query: 604 RRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHH 663
RRPRDDRD+GRERDK DRDRDRE SRDYERGH DR+RDRDRDRDR+KEDRDRYSDHH
Sbjct: 609 RRPRDDRDVGRERDK--DRDRDRELSRDYERGH---DRDRDRDRDRDRHKEDRDRYSDHH 668
Query: 664 RYRDREPEHEEDWERGRSSRTHNKSRLSQEEENRSRSRDADYGKRRRLTSE 711
RYRDREPEHE++WERGRSSRTH+KSRL QEEE+RSRSRDADYGKRRRLTS+
Sbjct: 669 RYRDREPEHEDEWERGRSSRTHSKSRLPQEEESRSRSRDADYGKRRRLTSD 707
BLAST of Lsi02G018290 vs. NCBI nr
Match:
XP_038897335.1 (cleavage and polyadenylation specificity factor subunit 6-like [Benincasa hispida] >XP_038897338.1 cleavage and polyadenylation specificity factor subunit 6-like [Benincasa hispida])
HSP 1 Score: 1270.8 bits (3287), Expect = 0.0e+00
Identity = 670/707 (94.77%), Postives = 682/707 (96.46%), Query Frame = 0
Query: 4 GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKSE 63
GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFK+
Sbjct: 9 GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKT- 68
Query: 64 EEPKMEPPAPVPPSSGAPIPGVGGGATEVARLRDGGHSVSERVTEVYNQIPDLKTNEMAI 123
EEPKMEPPAP PPSSGA IPGVGGGATEVA L DGGHSVSERVTE YNQIPD++ NEMAI
Sbjct: 69 EEPKMEPPAPAPPSSGASIPGVGGGATEVAGLGDGGHSVSERVTEGYNQIPDIRANEMAI 128
Query: 124 RGVVGSGPPVAGGGGIRVELGQGSKTNELEERSSNNVAAHQAQHQQQPQPQPQPQPQQQH 183
RG G GPPV GGGGIRVELGQGSKTNELEERS+NN+AAHQA QQQPQ Q QPQP Q H
Sbjct: 129 RGGAGPGPPVGGGGGIRVELGQGSKTNELEERSNNNIAAHQAPQQQQPQLQAQPQP-QHH 188
Query: 184 HQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGTILFVGDLHWW 243
HQPPQSGVLGNP SVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGTILFVGDLHWW
Sbjct: 189 HQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGTILFVGDLHWW 248
Query: 244 TTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRP 303
TTDAELE ELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRP
Sbjct: 249 TTDAELEAELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRP 308
Query: 304 CVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGPNDAVGKIGGSSIATGGNYQGGDN 363
CVVAYASPFSVK+MGEAQVNRNQQM+QATNPQARRGPNDAVGKIGGS+IATGGNYQGGDN
Sbjct: 309 CVVAYASPFSVKRMGEAQVNRNQQMSQATNPQARRGPNDAVGKIGGSNIATGGNYQGGDN 368
Query: 364 NRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGATPPLLHPQ 423
NRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGA PPLLHPQ
Sbjct: 369 NRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGAAPPLLHPQ 428
Query: 424 SMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFG 483
SMM QGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFG
Sbjct: 429 SMMAQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFG 488
Query: 484 RGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGGEEHGGGRAGESSYGEEAASDQQYGEG 543
RGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWG EEHGGGRA ESSYGEEA SDQQYGEG
Sbjct: 489 RGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRADESSYGEEAGSDQQYGEG 548
Query: 544 SHERGAWANSAKEKDRGSERDWSQSSDRRYRDERDVGYDRERSKEKDPGPDHDWPDRRPR 603
SH+RGAWANS KEKDRGSERDWSQSSDRRYRD+RDVGYDRERSKEKDPGPDHDWPDRRPR
Sbjct: 549 SHDRGAWANSTKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDPGPDHDWPDRRPR 608
Query: 604 DDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRD 663
DDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRD
Sbjct: 609 DDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRD 668
Query: 664 REPEHEEDWERGRSSRTHNKSRLSQEEENRSRSRDADYGKRRRLTSE 711
REPEHEEDWERGRSSRTH+KSRLSQEEENRSR+RDADYGKRRRLTSE
Sbjct: 669 REPEHEEDWERGRSSRTHSKSRLSQEEENRSRTRDADYGKRRRLTSE 713
BLAST of Lsi02G018290 vs. NCBI nr
Match:
XP_038897113.1 (uncharacterized PE-PGRS family protein PE_PGRS46-like [Benincasa hispida])
HSP 1 Score: 1268.1 bits (3280), Expect = 0.0e+00
Identity = 673/707 (95.19%), Postives = 682/707 (96.46%), Query Frame = 0
Query: 4 GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKSE 63
GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFK+
Sbjct: 9 GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKT- 68
Query: 64 EEPKMEPPAPVPPSSGAPIPGVGGGATEVARLRDGGHSVSERVTEVYNQIPDLKTNEMAI 123
EEPKMEPPAPVPPSSGA IPGVGGGATEVA L DGGHSVSERVTE YNQIPDL+TNEMA+
Sbjct: 69 EEPKMEPPAPVPPSSGASIPGVGGGATEVAGLGDGGHSVSERVTEGYNQIPDLRTNEMAV 128
Query: 124 RGVVGSGPPVAGGGGIRVELGQGSKTNELEERSSNNVAAHQAQHQQQPQPQPQPQPQQQH 183
RG VGSGPPV GGGGIRVELGQGSKT+ELEERSSNNV AHQAQHQ Q QPQPQPQP Q H
Sbjct: 129 RGGVGSGPPVGGGGGIRVELGQGSKTSELEERSSNNVVAHQAQHQHQQQPQPQPQP-QHH 188
Query: 184 HQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGTILFVGDLHWW 243
HQPPQSGVLGNP SVENEGLLRQGG +NVNGVGGN FGNMGSAGGGGGGTILFVGDLHWW
Sbjct: 189 HQPPQSGVLGNPGSVENEGLLRQGGVINVNGVGGNAFGNMGSAGGGGGGTILFVGDLHWW 248
Query: 244 TTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRP 303
TTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRP
Sbjct: 249 TTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRP 308
Query: 304 CVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGPNDAVGKIGGSSIATGGNYQGGDN 363
CVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGPNDAVGKIGGSSIATGGNYQGGDN
Sbjct: 309 CVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGPNDAVGKIGGSSIATGGNYQGGDN 368
Query: 364 NRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGATPPLLHPQ 423
NRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGATPPLLHPQ
Sbjct: 369 NRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGATPPLLHPQ 428
Query: 424 SMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFG 483
SMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFG
Sbjct: 429 SMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFG 488
Query: 484 RGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGGEEHGGGRAGESSYGEEAASDQQYGEG 543
RGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWG EEHGGGRAGESSYGEEA SDQQYGEG
Sbjct: 489 RGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRAGESSYGEEAGSDQQYGEG 548
Query: 544 SHERGAWANSAKEKDRGSERDWSQSSDRRYRDERDVGYDRERSKEKDPGPDHDWPDRRPR 603
SHERGAWANSAKEKDRGSERDWSQSSDRRYRD DRERSKEKDPGPDHDWPDRRPR
Sbjct: 549 SHERGAWANSAKEKDRGSERDWSQSSDRRYRD------DRERSKEKDPGPDHDWPDRRPR 608
Query: 604 DDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRD 663
DDRDIGRERDKDRDRDRDRERSRDYERGHHDR+R+RDRDRDRDRYKEDRDRY DHHRYRD
Sbjct: 609 DDRDIGRERDKDRDRDRDRERSRDYERGHHDRERDRDRDRDRDRYKEDRDRYFDHHRYRD 668
Query: 664 REPEHEEDWERGRSSRTHNKSRLSQEEENRSRSRDADYGKRRRLTSE 711
REPEHEEDWERGRSSRTH+KSRLSQ+EENRSRSRD DYGKRRRLTSE
Sbjct: 669 REPEHEEDWERGRSSRTHSKSRLSQDEENRSRSRDVDYGKRRRLTSE 707
BLAST of Lsi02G018290 vs. NCBI nr
Match:
XP_031744545.1 (cleavage and polyadenylation specificity factor subunit CG7185-like [Cucumis sativus] >XP_031744546.1 cleavage and polyadenylation specificity factor subunit CG7185-like [Cucumis sativus] >KAE8645915.1 hypothetical protein Csa_011894 [Cucumis sativus])
HSP 1 Score: 1244.2 bits (3218), Expect = 0.0e+00
Identity = 662/713 (92.85%), Postives = 680/713 (95.37%), Query Frame = 0
Query: 4 GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKSE 63
GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRK+DDLGFK E
Sbjct: 9 GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKSDDLGFKRE 68
Query: 64 EEPKMEPPAPVPPSSGAPIPGVGGGATEVARLRD-GGHSVSERVTEVYNQIPDLKTNEMA 123
EEPKMEPPAPVPPSS A IPG+GGGATEV L D GG +VSERVTE YNQIPDL+TNEMA
Sbjct: 69 EEPKMEPPAPVPPSSAASIPGIGGGATEVTGLGDAGGRTVSERVTEGYNQIPDLRTNEMA 128
Query: 124 IRGVVGSGPPVAGGGGIRVELGQGSKTNELEERSSNNVAAHQA--QHQQQPQPQPQPQPQ 183
IRG VGSGPPV G GIRVELGQGSK ELEERSSNNVA HQA Q QQQPQPQPQPQPQ
Sbjct: 129 IRGGVGSGPPVGTGVGIRVELGQGSKAIELEERSSNNVAGHQAPQQQQQQPQPQPQPQPQ 188
Query: 184 ---QQHHQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGTILFV 243
Q HHQPPQSGVLGNP SVENEGLLRQGGGVNVNGVGGNGFGN+GSAGGGGGGTILFV
Sbjct: 189 PQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNIGSAGGGGGGTILFV 248
Query: 244 GDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGH 303
GDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGH
Sbjct: 249 GDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGH 308
Query: 304 IFNGRPCVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGPNDAVGKIGGSSIATGGN 363
IFNGRPCVVAYASPFSVKKMGEAQV+RNQQ+AQATNPQARR PN+AVGKIGG+SIATGGN
Sbjct: 309 IFNGRPCVVAYASPFSVKKMGEAQVSRNQQIAQATNPQARRAPNEAVGKIGGNSIATGGN 368
Query: 364 YQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGATP 423
YQGGDNNRGSGRGNWGR NAHGMGGRGPAG MR RGGGMGGRGIMGNGGNGFGQGIGATP
Sbjct: 369 YQGGDNNRGSGRGNWGRSNAHGMGGRGPAGQMRGRGGGMGGRGIMGNGGNGFGQGIGATP 428
Query: 424 PLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHV 483
PLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHV
Sbjct: 429 PLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHV 488
Query: 484 NPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGGEEHGGGRAGESSYGEEAASD 543
NPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWG EE GGGRAGESSYGEEA SD
Sbjct: 489 NPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEQGGGRAGESSYGEEAGSD 548
Query: 544 QQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDERDVGYDRERSKEKDPGPDHDW 603
Q YGEGSHERG WANSAKEKDRGSERDWSQSSDRRYRD+RDVGYDRERSKEKDPGPDHDW
Sbjct: 549 QHYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDPGPDHDW 608
Query: 604 PDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSD 663
PDRRPR+DRDIGRERDKDRDR+RDRERSRDYERGHH+RDRER+RDRDRDRYK+DRD+YSD
Sbjct: 609 PDRRPREDRDIGRERDKDRDRERDRERSRDYERGHHERDRERERDRDRDRYKDDRDKYSD 668
Query: 664 HHRYRDREPEHEEDWERGRSSRTHNKSRLSQEEENRSRSRDADYGKRRRLTSE 711
HHRYRDREPEH+EDWERGRSSRTH+KSRLSQEEENRSRSRDADYGKRRRLTSE
Sbjct: 669 HHRYRDREPEHDEDWERGRSSRTHSKSRLSQEEENRSRSRDADYGKRRRLTSE 721
BLAST of Lsi02G018290 vs. NCBI nr
Match:
TYK07956.1 (cleavage and polyadenylation specificity factor subunit 6 [Cucumis melo var. makuwa])
HSP 1 Score: 1241.5 bits (3211), Expect = 0.0e+00
Identity = 661/710 (93.10%), Postives = 678/710 (95.49%), Query Frame = 0
Query: 4 GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKSE 63
GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKND LGFK E
Sbjct: 9 GEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDGLGFKRE 68
Query: 64 EEPKMEPPAPVPPSSGAPIPGVGGGATEVARLRD-GGHSVSERVTEVYNQIPDLKTNEMA 123
EEPKMEPPAPVPP+SGA IPG+GGGATEV L D GGH+VSERVTE YNQIPDL+TNEMA
Sbjct: 69 EEPKMEPPAPVPPTSGASIPGIGGGATEVTGLGDAGGHTVSERVTEGYNQIPDLRTNEMA 128
Query: 124 IRGVVGSGPPVAGGGGIRVELGQGSKTNELEERSSNNVAAHQAQHQQQPQPQPQPQPQQQ 183
IRG GSGPPV GG GIRVELGQGSK ELEERSSNNVA HQA QQPQ QPQPQP Q
Sbjct: 129 IRGGAGSGPPVGGGVGIRVELGQGSKPIELEERSSNNVAGHQA--PQQPQLQPQPQP-QH 188
Query: 184 HHQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGTILFVGDLHW 243
HHQPPQSGVLGNP SVENEGLLRQGGGVNVNGVGGNGFGN+GSAGGG GGT+LFVGDLHW
Sbjct: 189 HHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNVGSAGGGSGGTVLFVGDLHW 248
Query: 244 WTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGR 303
WTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGR
Sbjct: 249 WTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGR 308
Query: 304 PCVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGPNDAVGKIGGSSIATGGNYQGGD 363
PCVVAYASPFSVKKMGEAQVNRNQQ+AQATNPQARR PNDAVGKIGGSSIATGGNYQGGD
Sbjct: 309 PCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGD 368
Query: 364 NNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGATPPLLHP 423
NNRGSGRGNWGRGNAHGMGGRGPAGPMR RGGG+GGRGIMGNGGNGFGQGIGATPPLLHP
Sbjct: 369 NNRGSGRGNWGRGNAHGMGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHP 428
Query: 424 QSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFF 483
QSMMGQGFDPSFGAP+GRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFF
Sbjct: 429 QSMMGQGFDPSFGAPIGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFF 488
Query: 484 GRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGGEEHGGGRAGESSYGEEAASDQQYGE 543
GRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWG EE GGGRAGESSYGEEA SDQ YGE
Sbjct: 489 GRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEQGGGRAGESSYGEEAGSDQHYGE 548
Query: 544 GSHERGAWANSAKEKDRGSERDWSQSSDRRYRDERDVGYDRERSKEKDPGPDHDWPDRRP 603
GSHERG WANSAKEKDRGSERDWSQSSDRRYRD+RDVGYDRERSKEKDPGPDHDWPDRRP
Sbjct: 549 GSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDPGPDHDWPDRRP 608
Query: 604 RDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYR 663
RDDRDIGRERDKDRDRDRDRERSRDYERGHH+RDRER+RDRDRDRYK+DR+RYSDHHRYR
Sbjct: 609 RDDRDIGRERDKDRDRDRDRERSRDYERGHHERDRERERDRDRDRYKDDRERYSDHHRYR 668
Query: 664 DREPEHEEDWERGRSSRT--HNKSRLSQEEENRSRSRDADYGKRRRLTSE 711
DREPEH+EDWERGRSSRT H+KSRLSQEEE+RSRSRDADYGKRRRLTSE
Sbjct: 669 DREPEHDEDWERGRSSRTHSHSKSRLSQEEESRSRSRDADYGKRRRLTSE 715
BLAST of Lsi02G018290 vs. NCBI nr
Match:
XP_022936014.1 (cleavage and polyadenylation specificity factor subunit CG7185-like [Cucurbita moschata] >XP_022936015.1 cleavage and polyadenylation specificity factor subunit CG7185-like [Cucurbita moschata])
HSP 1 Score: 1238.4 bits (3203), Expect = 0.0e+00
Identity = 664/730 (90.96%), Postives = 682/730 (93.42%), Query Frame = 0
Query: 1 MDEGE-----GVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
MDEGE G DQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1 MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
Query: 61 DDLGFKSEEEPKMEPPAPVPPSSGAPIPGVGGGATEVARLRDGGHSVSERVTEVYNQIPD 120
DDLGFKSEEEPKMEPPA VPP+SGA IPG GGG T+V L DGGHSV+ERVTE YNQIPD
Sbjct: 61 DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTEGYNQIPD 120
Query: 121 LKTNEMAIRGVVGSGPPVAGGGGIRVELGQGSKTNELEERSSNNVAAHQAQHQQQPQP-- 180
L+TNEMAIR GSGPP+ GGGGIRVELGQGSKTNELEERSSNNVAAHQA QQQPQP
Sbjct: 121 LRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQPQPLQ 180
Query: 181 ------QPQPQPQQQ---HHQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNMG 240
QPQPQPQQQ HHQ Q GVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGN+G
Sbjct: 181 QLQPPAQPQPQPQQQTQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG 240
Query: 241 SA----GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVE 300
+A GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKF+DEKASGKSKGYCQVE
Sbjct: 241 NAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE 300
Query: 301 FYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGP 360
FYDPSAATACKEGMNGH+FNGRPCVVAYASPFSVK+MGEAQVNRNQQMAQATNPQARRGP
Sbjct: 301 FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP 360
Query: 361 NDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRG 420
ND VGK+GGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMR+RGGGMGGRG
Sbjct: 361 NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG 420
Query: 421 IMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS 480
IMGNGGNGFGQG+GATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS
Sbjct: 421 IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS 480
Query: 481 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGGEEH 540
SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWG EEH
Sbjct: 481 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH 540
Query: 541 GGGRAGESSYGEEAASDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDERDVG 600
GGGRAGESSYGEEA SDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRD
Sbjct: 541 GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRD----- 600
Query: 601 YDRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERD 660
DRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRD+ERSRDYERGHHDRDR+RD
Sbjct: 601 -DRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRD 660
Query: 661 RDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHNKSRLSQEEENRSRSRDAD 711
RDRDRDRYKEDRDRYSDHHRYRDREPEH+EDWERGRSSRTH+KSRL QEEENRSR+RDAD
Sbjct: 661 RDRDRDRYKEDRDRYSDHHRYRDREPEHDEDWERGRSSRTHSKSRLPQEEENRSRTRDAD 720
BLAST of Lsi02G018290 vs. TAIR 10
Match:
AT5G55670.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 677.9 bits (1748), Expect = 8.6e-195
Identity = 438/738 (59.35%), Postives = 523/738 (70.87%), Query Frame = 0
Query: 1 MDEGEGVDQIDQFHRNEAISAVADDGFLGEDE-DEYEDLYNDVNVGEGFLQSLRKNDDLG 60
MDEG+G DQ+DQFH+NEAISAVADDGF+ E+E D+YEDLYNDVNVGEGFLQS++KND+ G
Sbjct: 1 MDEGDGRDQMDQFHQNEAISAVADDGFMAEEEDDDYEDLYNDVNVGEGFLQSMKKNDEAG 60
Query: 61 FKSEEEPK--MEPPAPVPPSSG-----APIPGVGGGATEVARLRDGGHSVSERVTEVYNQ 120
++EE+ K ME V P G IPG+ G + E + G S T+V
Sbjct: 61 SRNEEKEKVNMEEEDRVEPVLGEAEVSISIPGLVGESVEKEAEAESGGGGSGSGTDVVVA 120
Query: 121 IPDLKTNEMAIRGV---VGSGPPVAGGGGIRVELGQGS-KTNELEERSSNNVAAHQAQHQ 180
E+ + V + G GGG+RVELGQ S + N+LE NN++
Sbjct: 121 SSGYGAQEVKVSDVSQEIPGGIGTGTGGGLRVELGQASNRANDLEAPRGNNIS------- 180
Query: 181 QQPQPQPQPQPQQQHHQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGN----GFGNMG 240
Q P P +++ V+GN G + G G N+ G G N G G
Sbjct: 181 ---QGLLPPPPVLGNNENLMRPVMGNV-----NGGIPPGPGSNMVGNGANIAMPGVVGGG 240
Query: 241 SAGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDP 300
+ GGGGGG LFVGDLHWWTTDAELE ELCKYG +KEVKF+DEKASGKSKGYCQVEFYDP
Sbjct: 241 TGGGGGGGAFLFVGDLHWWTTDAELEAELCKYGAVKEVKFFDEKASGKSKGYCQVEFYDP 300
Query: 301 SAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRG----- 360
AA+ACK+ +NG+ FNGRPCVV YASP+SVK+MGEAQVNR QQ AQ+ QA+RG
Sbjct: 301 VAASACKDALNGYPFNGRPCVVEYASPYSVKRMGEAQVNRTQQ-AQSVIAQAKRGGPADP 360
Query: 361 ---PNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGM 420
P A ++ A GGN+QGG+ NRG GRGNWGRGNA GMGGRGP GPMR+R GM
Sbjct: 361 PSKPLVANNNNNNNNNAIGGNFQGGE-NRGFGRGNWGRGNAQGMGGRGPGGPMRNRPNGM 420
Query: 421 GGRGIMGNGGNGFGQGIGATPPL-LHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPF 480
GGRG+MGNG GFGQG+G PP+ + Q MMGQGF+ +FG PM RMG YGGFPGAP P F
Sbjct: 421 GGRGLMGNG--GFGQGMGTGPPMNMMHQPMMGQGFEQAFGGPMARMGGYGGFPGAPGPQF 480
Query: 481 SGILSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVD-GPNMGMWSDPSMGG 540
G+LSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMP +GVD G NMGMW DP+ GG
Sbjct: 481 PGLLSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPNAGVDGGHNMGMW-DPNSGG 540
Query: 541 WG-GEEHGGGRAGESSYGEEAASDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRY 600
WG GE+ G GRA ESSYGEEAASD QYGE +HERGA N KEK+R SER+WS SSDRR
Sbjct: 541 WGAGEDLGSGRAAESSYGEEAASDHQYGEVNHERGARPNPVKEKERASEREWSGSSDRRN 600
Query: 601 RDERDVGYDRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHH 660
R+++D GY+R+ +EKD G +D P+RR RDDRD GRER+++ +DRERSR+ H
Sbjct: 601 REDKDAGYERDIPREKDVGHGYDMPERRHRDDRDTGREREREH-HHKDRERSRE-----H 660
Query: 661 DRDRERDRDRDRDRYKEDRDRYSDHHRYRDR-EPEHEEDWERGRSSRTHNKSRLSQEEEN 711
RDRE R+R+RDR++E+R+RY HR R R EPEH+E+W RGRSSR HNKSRLS+E+ +
Sbjct: 661 VRDRE--RERERDRHREERERYGGDHRTRHRDEPEHDEEWNRGRSSRGHNKSRLSREDNH 710
BLAST of Lsi02G018290 vs. TAIR 10
Match:
AT5G55670.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 455.3 bits (1170), Expect = 9.0e-128
Identity = 343/735 (46.67%), Postives = 418/735 (56.87%), Query Frame = 0
Query: 1 MDEGEGVDQIDQFHRNEAISAVADDGFLGEDE-DEYEDLYNDVNVGEGFLQSLRKNDDLG 60
MDEG+G DQ+DQFH+NEAISAVADDGF+ E+E D+YEDLYNDVNVGEGFLQS++KND+ G
Sbjct: 1 MDEGDGRDQMDQFHQNEAISAVADDGFMAEEEDDDYEDLYNDVNVGEGFLQSMKKNDEAG 60
Query: 61 FKSEEEPK--MEPPAPVPPSSG-----APIPGVGGGATEVARLRDGGHSVSERVTEVYNQ 120
++EE+ K ME V P G IPG+ G + E + G S T+V
Sbjct: 61 SRNEEKEKVNMEEEDRVEPVLGEAEVSISIPGLVGESVEKEAEAESGGGGSGSGTDVVVA 120
Query: 121 IPDLKTNEMAIRGV---VGSGPPVAGGGGIRVELGQGS-KTNELEERSSNNVAAHQAQHQ 180
E+ + V + G GGG+RVELGQ S + N+LE NN++
Sbjct: 121 SSGYGAQEVKVSDVSQEIPGGIGTGTGGGLRVELGQASNRANDLEAPRGNNIS------- 180
Query: 181 QQPQPQPQPQPQQQHHQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGN----GFGNMG 240
Q P P +++ V+GN G + G G N+ G G N G G
Sbjct: 181 ---QGLLPPPPVLGNNENLMRPVMGNV-----NGGIPPGPGSNMVGNGANIAMPGVVGGG 240
Query: 241 SAGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDP 300
+ GGGGGG LFVGDLHWWTTDAELE ELCKYG +KEVKF+DEKASGKSKGYCQVEFYDP
Sbjct: 241 TGGGGGGGAFLFVGDLHWWTTDAELEAELCKYGAVKEVKFFDEKASGKSKGYCQVEFYDP 300
Query: 301 SAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRG----- 360
AA+ACK+ +NG+ FNGRPCVV YASP+SVK+MGEAQVNR QQ AQ+ QA+RG
Sbjct: 301 VAASACKDALNGYPFNGRPCVVEYASPYSVKRMGEAQVNRTQQ-AQSVIAQAKRGGPADP 360
Query: 361 ---PNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGM 420
P A ++ A GGN+QGG+ NRG GRGNWGRGNA GMGGRGP GPMR+R GM
Sbjct: 361 PSKPLVANNNNNNNNNAIGGNFQGGE-NRGFGRGNWGRGNAQGMGGRGPGGPMRNRPNGM 420
Query: 421 GGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFS 480
Sbjct: 421 ------------------------------------------------------------ 480
Query: 481 GILSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWG 540
Sbjct: 481 ------------------------------------------------------------ 540
Query: 541 GEEHGGGRAGESSYGEEAASDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDE 600
GGRA ESSYGEEAASD QYGE +HERGA N KEK+R SER+WS SSDRR R++
Sbjct: 541 -----GGRAAESSYGEEAASDHQYGEVNHERGARPNPVKEKERASEREWSGSSDRRNRED 585
Query: 601 RDVGYDRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHDRD 660
+D GY+R+ +EKD G +D P+RR RDDRD GRER+++ +DRERSR+ H RD
Sbjct: 601 KDAGYERDIPREKDVGHGYDMPERRHRDDRDTGREREREH-HHKDRERSRE-----HVRD 585
Query: 661 RERDRDRDRDRYKEDRDRYSDHHRYRDR-EPEHEEDWERGRSSRTHNKSRLSQEEENRSR 711
RE R+R+RDR++E+R+RY HR R R EPEH+E+W RGRSSR HNKSRLS+E+ +RS+
Sbjct: 661 RE--RERERDRHREERERYGGDHRTRHRDEPEHDEEWNRGRSSRGHNKSRLSREDNHRSK 585
BLAST of Lsi02G018290 vs. TAIR 10
Match:
AT1G13190.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 239.2 bits (609), Expect = 1.0e-62
Identity = 260/726 (35.81%), Postives = 353/726 (48.62%), Query Frame = 0
Query: 19 ISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKSEEEPKMEPPAPVPPSS 78
I A+AD+ +G D+DEY+DLY+DVNVGE F F++ +P +PPA V S+
Sbjct: 21 IPALADEELMG-DDDEYDDLYSDVNVGESF-----------FQAHNQP--QPPAQVNTSN 80
Query: 79 GA-----------PIPG-VGGGATEVARLRDGGH---SVSERVTEVYNQIP--------- 138
+ P G V GG E DGGH S + ++VY Q
Sbjct: 81 ASLQAQNSHVAAEPRMGIVSGGTVEGKYRNDGGHNGISGPDTRSDVYPQASSFGAKGLNI 140
Query: 139 DLKTNEMAIRGVVGSGPPVAGGGGIRVELGQGSKTNELEERSSNNVAAHQAQHQQQPQPQ 198
D+++N++A + GS V G G+ N E N+ A QQ P Q
Sbjct: 141 DIQSNKIAQQ---GSTTVVLNNHGF-----SGNAVNVPEMPVHNSYGAPPQGAQQIPVSQ 200
Query: 199 PQPQPQ-QQHHQPPQSGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGT 258
P + P QS V+ N G T
Sbjct: 201 MSVNPNVMMNKSPTQSFVVDN------------------------------------GNT 260
Query: 259 ILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEG 318
+LFVG+LHWWTTDAE+E L +YG +KE+KF+DE+ SGKSKGYCQVEFYD +AA ACKEG
Sbjct: 261 MLFVGELHWWTTDAEIESVLSQYGRVKEIKFFDERVSGKSKGYCQVEFYDSAAAAACKEG 320
Query: 319 MNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGPNDAVGKIGGSSIA 378
MNG IFNG+ CVVA+ASP ++K+MG RNQ Q N RR N+ +G+ G++
Sbjct: 321 MNGFIFNGKACVVAFASPETLKQMGANFTGRNQGQNQIQN---RRPLNEGMGR--GNNNN 380
Query: 379 TGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGI----MGNGGNGF 438
N Q GD R GRG + RG GMG RG A GG M GRG+ G+G +
Sbjct: 381 NNMNTQNGDGGRNYGRGGFARG-GQGMGNRGGAW-----GGAMRGRGVNNMASGSGAGPY 440
Query: 439 GQGIG--ATPPLLHPQSMMGQ-GFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVG 498
G G+ A ++HPQ MMG GFDP+F MGR YGG+ G P G+ S+P V
Sbjct: 441 GPGLAGPAFGGMMHPQGMMGAGGFDPTF---MGRGAGYGGYSGIAYP---GMPHSYPGVN 500
Query: 499 GVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPN-MGMWSDPSMGGW--GGEEHGGG 558
+G+ G+APHVNPAFFG GMG M +SG++G + MWS+ + GG GG E+GG
Sbjct: 501 AMGMVGIAPHVNPAFFG-----TGMGTMGSSGMNGVHAAAMWSEANGGGGEEGGSEYGG- 560
Query: 559 RAGESSYGEEAASDQQYGEGSHERGAWANSAKEKDRG-SERDWSQSS-DRRYRDERDVGY 618
Y +E ++ +++K+R +ERDWS++S DRR++ R+
Sbjct: 561 ------YEDETQEKEE------------KPSRDKERATTERDWSENSGDRRHKSHRE--- 571
Query: 619 DRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDR 678
E+D R+
Sbjct: 621 -----------------------------EKDSHRE------------------------ 571
Query: 679 DRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSS-RTHNKSRLSQEEENRSRSRDAD 707
YK+ RDR SD +++RG+SS ++ ++SR+S E+++RSRSRDAD
Sbjct: 681 ------YKQQRDRDSD-------------EFDRGQSSLKSRSRSRMS-EDDHRSRSRDAD 571
BLAST of Lsi02G018290 vs. TAIR 10
Match:
AT5G53440.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 43.5 bits (101), Expect = 8.2e-04
Identity = 61/158 (38.61%), Postives = 88/158 (55.70%), Query Frame = 0
Query: 552 NSAKEKDRGSERDWSQSSDRRYRDERDVGYDRERSKEKDPGPDHDWPDRRPRDDRDIGRE 611
+ +K+K + + D D E D ++RER+++ D D + DR DRD E
Sbjct: 276 DESKKKSKFQDNDHGHEPD----SELDGYHERERNRDYDRESDRNERDRERTRDRDRDYE 335
Query: 612 RDKDRDRDRDRERS---RDYERG-HHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDREPE 671
RD+DRDRDRDRER RDYE +HDRD +RDR RDRDR D +R H R +DR +
Sbjct: 336 RDRDRDRDRDRERDRDRRDYEHDRYHDRDWDRDRSRDRDR---DHERDRTHDREKDRSRD 395
Query: 672 HEEDWERGRSSRTHNKSR-LSQEEENRSRSRDADYGKR 705
+ D +R +S R + R +S+ ++ R +D G+R
Sbjct: 396 YYHDGKRSKSDRERDNDRDVSRLDDQSGRYKDRRDGRR 426
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3CC60 | 0.0e+00 | 93.10 | Cleavage and polyadenylation specificity factor subunit 6 OS=Cucumis melo var. m... | [more] |
A0A6J1F726 | 0.0e+00 | 90.96 | cleavage and polyadenylation specificity factor subunit CG7185-like OS=Cucurbita... | [more] |
A0A0A0K3G6 | 0.0e+00 | 92.66 | RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G104800 PE=4 SV... | [more] |
A0A6J1ILS2 | 0.0e+00 | 90.93 | cleavage and polyadenylation specificity factor subunit 6-like OS=Cucurbita maxi... | [more] |
A0A6J1CCR1 | 0.0e+00 | 90.01 | cleavage and polyadenylation specificity factor subunit 6 OS=Momordica charantia... | [more] |
Match Name | E-value | Identity | Description | |
XP_038897335.1 | 0.0e+00 | 94.77 | cleavage and polyadenylation specificity factor subunit 6-like [Benincasa hispid... | [more] |
XP_038897113.1 | 0.0e+00 | 95.19 | uncharacterized PE-PGRS family protein PE_PGRS46-like [Benincasa hispida] | [more] |
XP_031744545.1 | 0.0e+00 | 92.85 | cleavage and polyadenylation specificity factor subunit CG7185-like [Cucumis sat... | [more] |
TYK07956.1 | 0.0e+00 | 93.10 | cleavage and polyadenylation specificity factor subunit 6 [Cucumis melo var. mak... | [more] |
XP_022936014.1 | 0.0e+00 | 90.96 | cleavage and polyadenylation specificity factor subunit CG7185-like [Cucurbita m... | [more] |
Match Name | E-value | Identity | Description | |
AT5G55670.1 | 8.6e-195 | 59.35 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT5G55670.2 | 9.0e-128 | 46.67 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT1G13190.1 | 1.0e-62 | 35.81 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT5G53440.1 | 8.2e-04 | 38.61 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |