Lsi02G017860 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G017860
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	GPI-anchored protein LLG1
Location	chr02: 23609951 .. 23612675 (-)
RNA-Seq Expression	Lsi02G017860
Synteny	Lsi02G017860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAAGATATAATTATTTATGCTAATTTCCTTTTCATTATTTATTTATTTCTTCACTTCAGACGTGGGAATTTAATAAAAAAATATATATACAAAAACAAATTCTAAGAGGAAATTCAATTCAACAGCCTGTCTCGCCTTCTCGTCGGAGAAGAAGAAGAACCTTCTCTCTCTCTTTCTCTCTTTCTCGCCGGAATTATGCTCTCCGATAGATCCTTCTGCAACTTCACAATGCTTCTTCTCTTCTTCCTCTCACTGCTTTTCACTTCTTCTTCATCCACTTCCATTTCAGGTACTTCAGATTCACAATCACCGCCACATTCCCAAATTTCCCTCTCTTTCTTCTCATTCTCCTCCTCCTCCTTCTCTATTTGTGTATTTAACTCTACTTTTTATGTTTTCCAGGCGATGTCTTTGAATCGAAGCTTTCAATCGGTCGGAACCTCCTACAGGCTAAAAAAGGTTCCGCCCTTTCTCTTCAACACCTTGATTTTGTTTTTGCTGAGTTCCTAATCTAATTTAGTTGTAGGCATGTTTCTGTTAGGTTTTGAGAGCTCTGTTTTATTTGTGCTTGTTTTGTTTGTATAAGATCTTGCCGATCTGTGTTTCTTCTCTCTCGAGGTTTTGTGGAATTTGGGGTTACTAGATATGGTTTTTATTGGTTTGAGTTTGACCATTTGATTCTCTCGTTTTCTACTCGTGTTCTTCTAGCCACGACCGTCGTGAAAAAAGGAAATTCAACCGAATTAGTAGCTTAATTTTATTGGGTCGAATGATTTATTGATTTCATAATTGTATTGGGTTGATCCATCCGTGATTTACGCTCTAATTCAATAACATTAAATGGGAGATAAAATGCGGCGTAAAGTTGAAAAAATTGTGGGTATTCAATGTTTAGGAAAATGTGTATTTCTGCCTGAAGATTAATTGATGTTCATTCTGTTTTATTACTCTTGGCTTGTTCATCAGCTCAAGATGAAAATTTCTAAATTTGGCATCTCATAAGTTTCTAATGCGAAAATAACCGAACAGTTAATTGAAAGAACTGGAACTTATGGCTTTCACATTTTCGTATCACCCCTGTGTTTACAACAATGAATTATCAGTTGAGCTAGTTTTATCTTGTAAAAGTTCTATCTGTACATTGGATTATAAAGTTCAGTTATAACTTGTATTATAAGATAATGTAAGTCCAATATAGTAATTTGTTGCATTTATTTGGTTACTTAAATTGATCCAGGAATTATCATTCCTAGTTTTTTTTCCATTAATATGTGAAGACAAAAATGTAGCCTCTTAAAAAGTCATATTCTTTGGTCTCTGTTGTCTATATCTCATGCCGGCCTTGTTTGTATAGATTTTGGCTTTTAATATAATTTTGCATTAGTGATGTGTTACAAAAATTATTTTGTCAACACATTCTTGGAGGTTTGAATAATTTTTTCTTTTCTTCCCCAGAAATCTTCAAATCATGTGGATTTAGAAAATGAAATACTTAGTATACGTGCAGTTTTTATCTGAGTGCAGATGTTTTTTTTTTCCTGAATTTTTGTCTAGTATGTTCATGCGGAAAAAGAAAAATGATGATCATTCCTCCATTTCCACCAACTTACTAAGTATTAACTTCACTTCACTAAACGCAAATTAAAGAACTAAAAATGCTTTATTTTGGCTTCTGATCAGATCTGCCAATTTTTGCCTTTATGTTTCAATATTTTGGTCCATATATTAAGCATATGACAATTAAGAAGCTTGTAGATGACACATTGTTTACTTGAGAGGAATGAGTTTTTGGTGCATACCTGTGGCTGCGAAAAAGATCTTGATGTCATTTTGAAATTGCTAGTATTTGATGACTGCGTATTTTGTGTGGAAAATCATTAGATTGCTTACCCCCACTCCTTATTAGTGGTCATAATCATATTACATTCAAGTTATAACTGAGATTTGTACTTTCTGAAGCTACGCTAAAACAAATTTGATCTAATCATGTAATGTTGCACAATTTATGCAGCTTGTCCAGTGAACTTTGAATTCTTGAACTACACCATCATCACAAGCAAGTGCAAGGGGCCACGATACCCTCCCAAGCTCTGTTGTTCAGCTTTGACAGAGTTCGCTTGCCCTTATGCAGATGATCTCAACGATTTAACAAATGATTGTGCTTCAACAATGTTCAGTTACATTAACCTGTATGGAAAATACCCTCCTGGTCTCTTCGCTAGCGAGTGCAAGGATGGGAAGCAAGGTCTAGGATGCCCTGCACTCCCACCCTCTACTTTAGCTGATATAAATTGGGGCTCGATAACACGTTTACCATCGTATTCACTGATCCTCTCGACTGGATTCATACTGCTGTTATGGCTATTATGATAAGGTCCAAGTGGCTACCATTTTTTTTCCCTTCCAATTTGTTACTGTACCTTAAACATGCTGGAAAAACTGCAATTCTTTATTACCATGTATTTACTATCATAGTTTCATAAGCTAAACTTGTGTATCTATCTACCACTTTGATAGCTGTGGAAAGGGAGTTCTTATTCATGAGATTGAACTGCAAAAGTTCTTGAGGTTTCTGTGTTCTTAATTTGTCAAGGAGACTTGGTGTATTATCATCATATATAGTTGTTTGTGATTTTTTTCATTTTATTATGTGATGTAATATAGAATGTTTGATAGATATTCATATAAATATTACTAAAAGTTATCATTTATAGTTGATTTG

mRNA sequence

CAAAAAGATATAATTATTTATGCTAATTTCCTTTTCATTATTTATTTATTTCTTCACTTCAGACGTGGGAATTTAATAAAAAAATATATATACAAAAACAAATTCTAAGAGGAAATTCAATTCAACAGCCTGTCTCGCCTTCTCGTCGGAGAAGAAGAAGAACCTTCTCTCTCTCTTTCTCTCTTTCTCGCCGGAATTATGCTCTCCGATAGATCCTTCTGCAACTTCACAATGCTTCTTCTCTTCTTCCTCTCACTGCTTTTCACTTCTTCTTCATCCACTTCCATTTCAGGCGATGTCTTTGAATCGAAGCTTTCAATCGGTCGGAACCTCCTACAGGCTAAAAAAGCTTGTCCAGTGAACTTTGAATTCTTGAACTACACCATCATCACAAGCAAGTGCAAGGGGCCACGATACCCTCCCAAGCTCTGTTGTTCAGCTTTGACAGAGTTCGCTTGCCCTTATGCAGATGATCTCAACGATTTAACAAATGATTGTGCTTCAACAATGTTCAGTTACATTAACCTGTATGGAAAATACCCTCCTGGTCTCTTCGCTAGCGAGTGCAAGGATGGGAAGCAAGGTCTAGGATGCCCTGCACTCCCACCCTCTACTTTAGCTGATATAAATTGGGGCTCGATAACACGTTTACCATCGTATTCACTGATCCTCTCGACTGGATTCATACTGCTGTTATGGCTATTATGATAAGGTCCAAGTGGCTACCATTTTTTTTCCCTTCCAATTTGTTACTGTACCTTAAACATGCTGGAAAAACTGCAATTCTTTATTACCATGTATTTACTATCATAGTTTCATAAGCTAAACTTGTGTATCTATCTACCACTTTGATAGCTGTGGAAAGGGAGTTCTTATTCATGAGATTGAACTGCAAAAGTTCTTGAGGTTTCTGTGTTCTTAATTTGTCAAGGAGACTTGGTGTATTATCATCATATATAGTTGTTTGTGATTTTTTTCATTTTATTATGTGATGTAATATAGAATGTTTGATAGATATTCATATAAATATTACTAAAAGTTATCATTTATAGTTGATTTG

Coding sequence (CDS)

ATGCTCTCCGATAGATCCTTCTGCAACTTCACAATGCTTCTTCTCTTCTTCCTCTCACTGCTTTTCACTTCTTCTTCATCCACTTCCATTTCAGGCGATGTCTTTGAATCGAAGCTTTCAATCGGTCGGAACCTCCTACAGGCTAAAAAAGCTTGTCCAGTGAACTTTGAATTCTTGAACTACACCATCATCACAAGCAAGTGCAAGGGGCCACGATACCCTCCCAAGCTCTGTTGTTCAGCTTTGACAGAGTTCGCTTGCCCTTATGCAGATGATCTCAACGATTTAACAAATGATTGTGCTTCAACAATGTTCAGTTACATTAACCTGTATGGAAAATACCCTCCTGGTCTCTTCGCTAGCGAGTGCAAGGATGGGAAGCAAGGTCTAGGATGCCCTGCACTCCCACCCTCTACTTTAGCTGATATAAATTGGGGCTCGATAACACGTTTACCATCGTATTCACTGATCCTCTCGACTGGATTCATACTGCTGTTATGGCTATTATGA

Protein sequence

MLSDRSFCNFTMLLLFFLSLLFTSSSSTSISGDVFESKLSIGRNLLQAKKACPVNFEFLNYTIITSKCKGPRYPPKLCCSALTEFACPYADDLNDLTNDCASTMFSYINLYGKYPPGLFASECKDGKQGLGCPALPPSTLADINWGSITRLPSYSLILSTGFILLLWLL

Homology

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BLAST of Lsi02G017860 vs. ExPASy Swiss-Prot
Match: Q9FKT1 (GPI-anchored protein LLG1 OS=Arabidopsis thaliana OX=3702 GN=LLG1 PE=1 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 6.7e-50
Identity = 96/137 (70.07%), Postives = 113/137 (82.48%), Query Frame = 0


Query: 14  LLFF--LSLLFTSSSSTSISGDVFESK-LSIGRNLLQAKKACPVNFEFLNYTIITSKCKG 73
           L FF  LS+L + SSS+ IS  VFES+ L +GRNLLQ KK CPVNFEF+NYTIITSKCKG
Sbjct: 8   LFFFLLLSVLSSFSSSSFISDGVFESQSLVLGRNLLQTKKTCPVNFEFMNYTIITSKCKG 67

Query: 74  PRYPPKLCCSALTEFACPYADDLNDLTNDCASTMFSYINLYGKYPPGLFASECKDGKQGL 133
           P+YPPK CC A  +FACPY D LNDL++DCA+TMFSYINLYGKYPPGLFA++CK+GK+GL
Sbjct: 68  PKYPPKECCGAFKDFACPYTDQLNDLSSDCATTMFSYINLYGKYPPGLFANQCKEGKEGL 127

Query: 134 GCPA---LPPSTLADIN 145
            CPA   LPP T A++N
Sbjct: 128 ECPAGSQLPPETSAEVN 144

[Close]

BLAST of Lsi02G017860 vs. ExPASy Swiss-Prot
Match: B3GS44 (GPI-anchored protein LORELEI OS=Arabidopsis thaliana OX=3702 GN=LRE PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 8.2e-40
Identity = 79/150 (52.67%), Postives = 107/150 (71.33%), Query Frame = 0


Query: 12  MLLLFFLSLLFTSSSSTSISGDVFESKLSI-GRNLLQAKKACPVNFEFLNYTIITSKCKG 71
           +L  F ++LL + SSS+SIS  VFES+ S+ GRNL  AKK C VNFE+++Y ++T +CKG
Sbjct: 5   LLFFFLMALLVSLSSSSSISDGVFESQTSVSGRNLRHAKKKCEVNFEYMDYKVLTKRCKG 64

Query: 72  PRYPPKLCCSALTEFACPYADDLNDLTNDCASTMFSYINLYGKYPPGLFASECKDGKQGL 131
           P +P K CCSA  EFACPY   +ND+ +DCA TMFSY+N+YG YP GLFA+EC++ K GL
Sbjct: 65  PAFPAKECCSAFKEFACPYVSQINDMNSDCAQTMFSYMNIYGNYPTGLFANECRERKDGL 124

Query: 132 GCPALPPSTLADINWGSITRLPSY-SLILS 160
            CP LPP    ++N  +    P + SL++S
Sbjct: 125 VCP-LPPLYSHNLNASTADSTPRFISLLIS 153

[Close]

BLAST of Lsi02G017860 vs. ExPASy Swiss-Prot
Match: Q9M0I0 (GPI-anchored protein LLG3 OS=Arabidopsis thaliana OX=3702 GN=LLG3 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 4.2e-36
Identity = 80/156 (51.28%), Postives = 105/156 (67.31%), Query Frame = 0


Query: 14  LLFFLSLLFTSSSSTS--ISGDVFESKLSIGRNLLQAKKACPVNFEFLNYTIITSKCKGP 73
           L+  LS+L  S  + S  IS D FES  S  R LLQAK  C  +F   NYTIITSKCKGP
Sbjct: 8   LVSLLSILLLSGFAFSHHISLDEFESHPSTSRALLQAKATCKEDFAAKNYTIITSKCKGP 67

Query: 74  RYPPKLCCSALTEFACPYADDLNDLTNDCASTMFSYINLYGKYPPGLFASECKDGKQGLG 133
            YP K+CCSA  +FACP+A+ LND   DCASTMFSYINLYG+YPPG+FA+ CK+GK+GL 
Sbjct: 68  NYPAKVCCSAFKDFACPFAEVLNDEKTDCASTMFSYINLYGRYPPGIFANMCKEGKEGLD 127

Query: 134 CPALPPSTLADINWGSITRLPSYSLILSTGFILLLW 168
           C  + P++ +     SI  + ++ L+++   +  L+
Sbjct: 128 CTDVTPTSSSH---ASIPLVSTHVLLITVSILFHLF 160

[Close]

BLAST of Lsi02G017860 vs. ExPASy Swiss-Prot
Match: Q6NLF4 (GPI-anchored protein LLG2 OS=Arabidopsis thaliana OX=3702 GN=LLG2 PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 6.7e-34
Identity = 79/165 (47.88%), Postives = 104/165 (63.03%), Query Frame = 0


Query: 7   FCNFTMLLLFFLSLLFTSSSSTSISGDVFESKLSIGRNLLQAKKACPVNFEFLNYTIITS 66
           +C  ++L +F L       S  S+S D F+   +  R LLQ +  C  +F   NYTIITS
Sbjct: 6   YCLLSLLPIFLL-------SGFSLSYDEFDGHAATSRALLQTRTTCKEDFANKNYTIITS 65

Query: 67  KCKGPRYPPKLCCSALTEFACPYADDLNDLTNDCASTMFSYINLYGKYPPGLFASECKDG 126
           +CKGP YP  +CCSA  +FACP+A+ LND  NDCASTMFSYINLYG+YPPG+FA+ CK+G
Sbjct: 66  RCKGPNYPANVCCSAFKDFACPFAEVLNDEKNDCASTMFSYINLYGRYPPGIFANMCKEG 125

Query: 127 KQGLGCPALPPSTLADINWGSITRLPSYS--LILSTGFILLLWLL 170
           K+GL C  +  S  A  +  SI R  + +   +LST  +L L  L
Sbjct: 126 KEGLDCTDVTQSASATSD--SIPRASTTASLAVLSTFLVLCLLFL 161

[Close]

BLAST of Lsi02G017860 vs. ExPASy TrEMBL
Match: A0A6J1F8E1 (GPI-anchored protein LLG1 OS=Cucurbita moschata OX=3662 GN=LOC111443044 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 2.9e-80
Identity = 149/169 (88.17%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 1   MLSDRSFCNFTMLLLFFLSLLFTSSSSTSISGDVFESKLSIGRNLLQAKKACPVNFEFLN 60
           M+SDRSFCNF+MLLLFFLSLLF++SSSTSISGDVFESK+ IGR+LLQA+KACPVNFEFLN
Sbjct: 1   MVSDRSFCNFSMLLLFFLSLLFSTSSSTSISGDVFESKVLIGRSLLQARKACPVNFEFLN 60

Query: 61  YTIITSKCKGPRYPPKLCCSALTEFACPYADDLNDLTNDCASTMFSYINLYGKYPPGLFA 120
           YTIITSKCKGPRYPP+ CC ALTEFACPYA DLNDLTNDCASTMFSYINLYGKYPPGLF+
Sbjct: 61  YTIITSKCKGPRYPPEQCCPALTEFACPYAKDLNDLTNDCASTMFSYINLYGKYPPGLFS 120

Query: 121 SECKDGKQGLGCPALPPSTLADINWGSITRLPSYSLILSTGFILLLWLL 170
           SECK GKQGL CPALPPST AD+NWGSI RLPS SLILSTGF+LLLWLL
Sbjct: 121 SECKGGKQGLECPALPPSTSADLNWGSIARLPSRSLILSTGFLLLLWLL 169

[Close]

BLAST of Lsi02G017860 vs. ExPASy TrEMBL
Match: A0A6J1IFC4 (GPI-anchored protein LLG1-like OS=Cucurbita maxima OX=3661 GN=LOC111476731 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 6.4e-80
Identity = 148/169 (87.57%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 1   MLSDRSFCNFTMLLLFFLSLLFTSSSSTSISGDVFESKLSIGRNLLQAKKACPVNFEFLN 60
           M+S+RSFCNF+MLLLFF+SLLF++SSSTSISGDVFESK+ IGR+LLQA+KACPVNFEFLN
Sbjct: 1   MVSNRSFCNFSMLLLFFISLLFSTSSSTSISGDVFESKVLIGRSLLQARKACPVNFEFLN 60

Query: 61  YTIITSKCKGPRYPPKLCCSALTEFACPYADDLNDLTNDCASTMFSYINLYGKYPPGLFA 120
           YTIITSKCKGPRYPPK CC ALTEFACPYA DLNDLTNDCASTMFSYINLYGKYPPGLF+
Sbjct: 61  YTIITSKCKGPRYPPKQCCPALTEFACPYAKDLNDLTNDCASTMFSYINLYGKYPPGLFS 120

Query: 121 SECKDGKQGLGCPALPPSTLADINWGSITRLPSYSLILSTGFILLLWLL 170
           SECK GKQGL CPALPPST AD+NWGSI RLPS SLILSTGF+LLLWLL
Sbjct: 121 SECKGGKQGLECPALPPSTSADLNWGSIARLPSRSLILSTGFLLLLWLL 169

[Close]

BLAST of Lsi02G017860 vs. ExPASy TrEMBL
Match: A0A1S3BIW0 (GPI-anchored protein LORELEI-like OS=Cucumis melo OX=3656 GN=LOC103490187 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 5.6e-76
Identity = 144/169 (85.21%), Postives = 154/169 (91.12%), Query Frame = 0


Query: 1   MLSDRSFCNFTMLLLFFLSLLFTSSSSTSISGDVFESKLSIGRNLLQAKKACPVNFEFLN 60
           MLS RSF N  MLLLFFLSLLFT SSSTSISG++FES  SIGRNLLQAKKACPVNFEFLN
Sbjct: 1   MLSHRSFFNLPMLLLFFLSLLFTFSSSTSISGNLFESNPSIGRNLLQAKKACPVNFEFLN 60

Query: 61  YTIITSKCKGPRYPPKLCCSALTEFACPYADDLNDLTNDCASTMFSYINLYGKYPPGLFA 120
           YTIITSKCKGPRYPPKLCCSAL EFACPY +D+NDLTNDCASTMFSYINLYGKYPPGLF+
Sbjct: 61  YTIITSKCKGPRYPPKLCCSALKEFACPYVEDINDLTNDCASTMFSYINLYGKYPPGLFS 120

Query: 121 SECKDGKQGLGCPALPPSTLADINWGSITRLPSYSLILSTGFILLLWLL 170
           SECK+GK+GL CPALPPST AD++W S T LPSYSLIL TGF+LLLWLL
Sbjct: 121 SECKEGKEGLECPALPPSTSADLSWCSKTSLPSYSLILLTGFVLLLWLL 169

[Close]

BLAST of Lsi02G017860 vs. ExPASy TrEMBL
Match: A0A6J1J2M4 (GPI-anchored protein LLG1-like OS=Cucurbita maxima OX=3661 GN=LOC111480694 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.0e-74
Identity = 138/168 (82.14%), Postives = 148/168 (88.10%), Query Frame = 0


Query: 2   LSDRSFCNFTMLLLFFLSLLFTSSSSTSISGDVFESKLSIGRNLLQAKKACPVNFEFLNY 61
           +SDRSFCNF+MLLLFF+SLLFT+SSSTSIS DVFESK SIGR LLQAKK CPVNFEFLNY
Sbjct: 3   VSDRSFCNFSMLLLFFISLLFTASSSTSISADVFESKASIGRGLLQAKKPCPVNFEFLNY 62

Query: 62  TIITSKCKGPRYPPKLCCSALTEFACPYADDLNDLTNDCASTMFSYINLYGKYPPGLFAS 121
           TIIT KCKGP+YPPKLCCSALTEFACPY+DDLND TNDCASTMFSY+NLYGKYPPGLF+S
Sbjct: 63  TIITGKCKGPQYPPKLCCSALTEFACPYSDDLNDPTNDCASTMFSYVNLYGKYPPGLFSS 122

Query: 122 ECKDGKQGLGCPALPPSTLADINWGSITRLPSYSLILSTGFILLLWLL 170
           ECK  K GL CP LPPS  AD +WGSI  LPS  LI S GF+LLLWLL
Sbjct: 123 ECKGDKNGLACPVLPPSASADQSWGSIANLPSRLLIFSPGFVLLLWLL 170

[Close]

BLAST of Lsi02G017860 vs. ExPASy TrEMBL
Match: A0A0A0K362 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G186190 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 6.9e-74
Identity = 142/169 (84.02%), Postives = 150/169 (88.76%), Query Frame = 0


Query: 1   MLSDRSFCNFTMLLLFFLSLLFTSSSSTSISGDVFESKLSIGRNLLQAKKACPVNFEFLN 60
           MLS RSF N TMLLLFFLSLLFT SSS  ISG  FES  SIGRNLLQAKKACPVNFEFLN
Sbjct: 1   MLSHRSFFNLTMLLLFFLSLLFTFSSSAFISGHAFESNPSIGRNLLQAKKACPVNFEFLN 60

Query: 61  YTIITSKCKGPRYPPKLCCSALTEFACPYADDLNDLTNDCASTMFSYINLYGKYPPGLFA 120
           YTIITSKCKGPRYPPK CCSAL EFACPY +DLNDLTNDCASTMFSYINLYGKYPPGLF+
Sbjct: 61  YTIITSKCKGPRYPPKFCCSALKEFACPYVEDLNDLTNDCASTMFSYINLYGKYPPGLFS 120

Query: 121 SECKDGKQGLGCPALPPSTLADINWGSITRLPSYSLILSTGFILLLWLL 170
           SECK+GK+GL CPALPPST AD++WGS T LPSYSLIL TGF+LL+ LL
Sbjct: 121 SECKEGKEGLECPALPPSTSADLSWGSKTSLPSYSLILLTGFVLLVRLL 169

[Close]

BLAST of Lsi02G017860 vs. NCBI nr
Match: XP_038896951.1 (GPI-anchored protein LLG1-like [Benincasa hispida])

HSP 1 Score: 314.3 bits (804), Expect = 6.4e-82
Identity = 152/169 (89.94%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 1   MLSDRSFCNFTMLLLFFLSLLFTSSSSTSISGDVFESKLSIGRNLLQAKKACPVNFEFLN 60
           MLSDRSFCNFTMLLL FLSLLFTSSSSTSISGDVFESK+SIGRNLLQAKKACPVNFEFLN
Sbjct: 1   MLSDRSFCNFTMLLLLFLSLLFTSSSSTSISGDVFESKVSIGRNLLQAKKACPVNFEFLN 60

Query: 61  YTIITSKCKGPRYPPKLCCSALTEFACPYADDLNDLTNDCASTMFSYINLYGKYPPGLFA 120
           YTIITSKCKGPRYPP LCCSAL EFACPY DDLNDLTNDCASTMFSYINLYGKYPPGLF+
Sbjct: 61  YTIITSKCKGPRYPPNLCCSALKEFACPYVDDLNDLTNDCASTMFSYINLYGKYPPGLFS 120

Query: 121 SECKDGKQGLGCPALPPSTLADINWGSITRLPSYSLILSTGFILLLWLL 170
           SECK+GK+GL C  L P++ AD+NWGSITRLPSYSLILSTGF+LLLWLL
Sbjct: 121 SECKEGKEGLECTVLAPASSADLNWGSITRLPSYSLILSTGFVLLLWLL 169

[Close]

BLAST of Lsi02G017860 vs. NCBI nr
Match: XP_022936417.1 (GPI-anchored protein LLG1 [Cucurbita moschata])

HSP 1 Score: 307.8 bits (787), Expect = 5.9e-80
Identity = 149/169 (88.17%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 1   MLSDRSFCNFTMLLLFFLSLLFTSSSSTSISGDVFESKLSIGRNLLQAKKACPVNFEFLN 60
           M+SDRSFCNF+MLLLFFLSLLF++SSSTSISGDVFESK+ IGR+LLQA+KACPVNFEFLN
Sbjct: 1   MVSDRSFCNFSMLLLFFLSLLFSTSSSTSISGDVFESKVLIGRSLLQARKACPVNFEFLN 60

Query: 61  YTIITSKCKGPRYPPKLCCSALTEFACPYADDLNDLTNDCASTMFSYINLYGKYPPGLFA 120
           YTIITSKCKGPRYPP+ CC ALTEFACPYA DLNDLTNDCASTMFSYINLYGKYPPGLF+
Sbjct: 61  YTIITSKCKGPRYPPEQCCPALTEFACPYAKDLNDLTNDCASTMFSYINLYGKYPPGLFS 120

Query: 121 SECKDGKQGLGCPALPPSTLADINWGSITRLPSYSLILSTGFILLLWLL 170
           SECK GKQGL CPALPPST AD+NWGSI RLPS SLILSTGF+LLLWLL
Sbjct: 121 SECKGGKQGLECPALPPSTSADLNWGSIARLPSRSLILSTGFLLLLWLL 169

[Close]

BLAST of Lsi02G017860 vs. NCBI nr
Match: XP_023536509.1 (GPI-anchored protein LLG1-like [Cucurbita pepo subsp. pepo] >XP_023536510.1 GPI-anchored protein LLG1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 307.0 bits (785), Expect = 1.0e-79
Identity = 148/168 (88.10%), Postives = 159/168 (94.64%), Query Frame = 0


Query: 1   MLSDRSFCNFTMLLLFFLSLLFTSSSSTSISGDVFESKLSIGRNLLQAKKACPVNFEFLN 60
           M+SDRSFCNF+ML+LFFLSLLF++SSSTSISGDVFESK+ IGR+LLQA+KACPVNFEFLN
Sbjct: 52  MVSDRSFCNFSMLILFFLSLLFSTSSSTSISGDVFESKVLIGRSLLQARKACPVNFEFLN 111

Query: 61  YTIITSKCKGPRYPPKLCCSALTEFACPYADDLNDLTNDCASTMFSYINLYGKYPPGLFA 120
           YTIITSKCKGPRYPP+ CC ALTEFACPYA DLNDLTNDCASTMFSYINLYGKYPPGLF+
Sbjct: 112 YTIITSKCKGPRYPPEQCCPALTEFACPYAKDLNDLTNDCASTMFSYINLYGKYPPGLFS 171

Query: 121 SECKDGKQGLGCPALPPSTLADINWGSITRLPSYSLILSTGFILLLWL 169
           SECK GKQGL CPALPPST AD+NWGSI RLPS SLILSTGFILLLWL
Sbjct: 172 SECKGGKQGLECPALPPSTSADLNWGSIARLPSRSLILSTGFILLLWL 219

[Close]

BLAST of Lsi02G017860 vs. NCBI nr
Match: XP_022976292.1 (GPI-anchored protein LLG1-like [Cucurbita maxima])

HSP 1 Score: 306.6 bits (784), Expect = 1.3e-79
Identity = 148/169 (87.57%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 1   MLSDRSFCNFTMLLLFFLSLLFTSSSSTSISGDVFESKLSIGRNLLQAKKACPVNFEFLN 60
           M+S+RSFCNF+MLLLFF+SLLF++SSSTSISGDVFESK+ IGR+LLQA+KACPVNFEFLN
Sbjct: 1   MVSNRSFCNFSMLLLFFISLLFSTSSSTSISGDVFESKVLIGRSLLQARKACPVNFEFLN 60

Query: 61  YTIITSKCKGPRYPPKLCCSALTEFACPYADDLNDLTNDCASTMFSYINLYGKYPPGLFA 120
           YTIITSKCKGPRYPPK CC ALTEFACPYA DLNDLTNDCASTMFSYINLYGKYPPGLF+
Sbjct: 61  YTIITSKCKGPRYPPKQCCPALTEFACPYAKDLNDLTNDCASTMFSYINLYGKYPPGLFS 120

Query: 121 SECKDGKQGLGCPALPPSTLADINWGSITRLPSYSLILSTGFILLLWLL 170
           SECK GKQGL CPALPPST AD+NWGSI RLPS SLILSTGF+LLLWLL
Sbjct: 121 SECKGGKQGLECPALPPSTSADLNWGSIARLPSRSLILSTGFLLLLWLL 169

[Close]

BLAST of Lsi02G017860 vs. NCBI nr
Match: KAG6592129.1 (GPI-anchored protein LLG1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 305.8 bits (782), Expect = 2.3e-79
Identity = 148/169 (87.57%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MLSDRSFCNFTMLLLFFLSLLFTSSSSTSISGDVFESKLSIGRNLLQAKKACPVNFEFLN 60
           M+SDRSFCNF+MLLLFFLSLLF++SSSTSISGDVFESK+ IGR+LLQA+KACPVNFEFLN
Sbjct: 1   MVSDRSFCNFSMLLLFFLSLLFSTSSSTSISGDVFESKVLIGRSLLQARKACPVNFEFLN 60

Query: 61  YTIITSKCKGPRYPPKLCCSALTEFACPYADDLNDLTNDCASTMFSYINLYGKYPPGLFA 120
           YTIITSKCKGPRYPP+ CC ALTEFACPYA DLNDLTNDCASTMFSYINLYGKYPPGLF+
Sbjct: 61  YTIITSKCKGPRYPPEQCCPALTEFACPYAKDLNDLTNDCASTMFSYINLYGKYPPGLFS 120

Query: 121 SECKDGKQGLGCPALPPSTLADINWGSITRLPSYSLILSTGFILLLWLL 170
           SECK GKQGL CPALPPS  AD+NWGSI RLPS SLILSTGF+LLLWLL
Sbjct: 121 SECKGGKQGLECPALPPSASADLNWGSIARLPSRSLILSTGFLLLLWLL 169

[Close]

BLAST of Lsi02G017860 vs. TAIR 10
Match: AT5G56170.1 (LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 )

HSP 1 Score: 198.4 bits (503), Expect = 4.7e-51
Identity = 96/137 (70.07%), Postives = 113/137 (82.48%), Query Frame = 0


Query: 14  LLFF--LSLLFTSSSSTSISGDVFESK-LSIGRNLLQAKKACPVNFEFLNYTIITSKCKG 73
           L FF  LS+L + SSS+ IS  VFES+ L +GRNLLQ KK CPVNFEF+NYTIITSKCKG
Sbjct: 8   LFFFLLLSVLSSFSSSSFISDGVFESQSLVLGRNLLQTKKTCPVNFEFMNYTIITSKCKG 67

Query: 74  PRYPPKLCCSALTEFACPYADDLNDLTNDCASTMFSYINLYGKYPPGLFASECKDGKQGL 133
           P+YPPK CC A  +FACPY D LNDL++DCA+TMFSYINLYGKYPPGLFA++CK+GK+GL
Sbjct: 68  PKYPPKECCGAFKDFACPYTDQLNDLSSDCATTMFSYINLYGKYPPGLFANQCKEGKEGL 127

Query: 134 GCPA---LPPSTLADIN 145
            CPA   LPP T A++N
Sbjct: 128 ECPAGSQLPPETSAEVN 144

[Close]

BLAST of Lsi02G017860 vs. TAIR 10
Match: AT4G26466.1 (lorelei )

HSP 1 Score: 164.9 bits (416), Expect = 5.8e-41
Identity = 79/150 (52.67%), Postives = 107/150 (71.33%), Query Frame = 0


Query: 12  MLLLFFLSLLFTSSSSTSISGDVFESKLSI-GRNLLQAKKACPVNFEFLNYTIITSKCKG 71
           +L  F ++LL + SSS+SIS  VFES+ S+ GRNL  AKK C VNFE+++Y ++T +CKG
Sbjct: 5   LLFFFLMALLVSLSSSSSISDGVFESQTSVSGRNLRHAKKKCEVNFEYMDYKVLTKRCKG 64

Query: 72  PRYPPKLCCSALTEFACPYADDLNDLTNDCASTMFSYINLYGKYPPGLFASECKDGKQGL 131
           P +P K CCSA  EFACPY   +ND+ +DCA TMFSY+N+YG YP GLFA+EC++ K GL
Sbjct: 65  PAFPAKECCSAFKEFACPYVSQINDMNSDCAQTMFSYMNIYGNYPTGLFANECRERKDGL 124

Query: 132 GCPALPPSTLADINWGSITRLPSY-SLILS 160
            CP LPP    ++N  +    P + SL++S
Sbjct: 125 VCP-LPPLYSHNLNASTADSTPRFISLLIS 153

[Close]

BLAST of Lsi02G017860 vs. TAIR 10
Match: AT4G28280.2 (LORELEI-LIKE-GPI ANCHORED PROTEIN 3 )

HSP 1 Score: 152.5 bits (384), Expect = 3.0e-37
Identity = 80/156 (51.28%), Postives = 105/156 (67.31%), Query Frame = 0


Query: 14  LLFFLSLLFTSSSSTS--ISGDVFESKLSIGRNLLQAKKACPVNFEFLNYTIITSKCKGP 73
           L+  LS+L  S  + S  IS D FES  S  R LLQAK  C  +F   NYTIITSKCKGP
Sbjct: 8   LVSLLSILLLSGFAFSHHISLDEFESHPSTSRALLQAKATCKEDFAAKNYTIITSKCKGP 67

Query: 74  RYPPKLCCSALTEFACPYADDLNDLTNDCASTMFSYINLYGKYPPGLFASECKDGKQGLG 133
            YP K+CCSA  +FACP+A+ LND   DCASTMFSYINLYG+YPPG+FA+ CK+GK+GL 
Sbjct: 68  NYPAKVCCSAFKDFACPFAEVLNDEKTDCASTMFSYINLYGRYPPGIFANMCKEGKEGLD 127

Query: 134 CPALPPSTLADINWGSITRLPSYSLILSTGFILLLW 168
           C  + P++ +     SI  + ++ L+++   +  L+
Sbjct: 128 CTDVTPTSSSH---ASIPLVSTHVLLITVSILFHLF 160

[Close]

BLAST of Lsi02G017860 vs. TAIR 10
Match: AT2G20700.1 (LORELEI-LIKE-GPI ANCHORED PROTEIN 2 )

HSP 1 Score: 145.2 bits (365), Expect = 4.8e-35
Identity = 79/165 (47.88%), Postives = 104/165 (63.03%), Query Frame = 0


Query: 7   FCNFTMLLLFFLSLLFTSSSSTSISGDVFESKLSIGRNLLQAKKACPVNFEFLNYTIITS 66
           +C  ++L +F L       S  S+S D F+   +  R LLQ +  C  +F   NYTIITS
Sbjct: 6   YCLLSLLPIFLL-------SGFSLSYDEFDGHAATSRALLQTRTTCKEDFANKNYTIITS 65

Query: 67  KCKGPRYPPKLCCSALTEFACPYADDLNDLTNDCASTMFSYINLYGKYPPGLFASECKDG 126
           +CKGP YP  +CCSA  +FACP+A+ LND  NDCASTMFSYINLYG+YPPG+FA+ CK+G
Sbjct: 66  RCKGPNYPANVCCSAFKDFACPFAEVLNDEKNDCASTMFSYINLYGRYPPGIFANMCKEG 125

Query: 127 KQGLGCPALPPSTLADINWGSITRLPSYS--LILSTGFILLLWLL 170
           K+GL C  +  S  A  +  SI R  + +   +LST  +L L  L
Sbjct: 126 KEGLDCTDVTQSASATSD--SIPRASTTASLAVLSTFLVLCLLFL 161

[Close]

BLAST of Lsi02G017860 vs. TAIR 10
Match: AT4G28280.1 (LORELEI-LIKE-GPI ANCHORED PROTEIN 3 )

HSP 1 Score: 136.3 bits (342), Expect = 2.2e-32
Identity = 62/117 (52.99%), Postives = 84/117 (71.79%), Query Frame = 0


Query: 51  ACPVNFEFLNYTIITSKCKGPRYPPKLCCSALTEFACPYADDLNDLTNDCASTMFSYINL 110
           AC  +F   NYTIITSKCKGP YP K+CCSA  +FACP+A+ LND   DCASTMFSYINL
Sbjct: 21  ACKEDFAAKNYTIITSKCKGPNYPAKVCCSAFKDFACPFAEVLNDEKTDCASTMFSYINL 80

Query: 111 YGKYPPGLFASECKDGKQGLGCPALPPSTLADINWGSITRLPSYSLILSTGFILLLW 168
           YG+YPPG+FA+ CK+GK+GL C  + P++ +     SI  + ++ L+++   +  L+
Sbjct: 81  YGRYPPGIFANMCKEGKEGLDCTDVTPTSSSH---ASIPLVSTHVLLITVSILFHLF 134

The following BLAST results are available for this feature:

BLAST of Lsi02G017860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKT1	6.7e-50	70.07	GPI-anchored protein LLG1 OS=Arabidopsis thaliana OX=3702 GN=LLG1 PE=1 SV=1	[more]
B3GS44	8.2e-40	52.67	GPI-anchored protein LORELEI OS=Arabidopsis thaliana OX=3702 GN=LRE PE=1 SV=1	[more]
Q9M0I0	4.2e-36	51.28	GPI-anchored protein LLG3 OS=Arabidopsis thaliana OX=3702 GN=LLG3 PE=2 SV=1	[more]
Q6NLF4	6.7e-34	47.88	GPI-anchored protein LLG2 OS=Arabidopsis thaliana OX=3702 GN=LLG2 PE=1 SV=1	[more]

BLAST of Lsi02G017860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F8E1	2.9e-80	88.17	GPI-anchored protein LLG1 OS=Cucurbita moschata OX=3662 GN=LOC111443044 PE=4 SV=...	[more]
A0A6J1IFC4	6.4e-80	87.57	GPI-anchored protein LLG1-like OS=Cucurbita maxima OX=3661 GN=LOC111476731 PE=4 ...	[more]
A0A1S3BIW0	5.6e-76	85.21	GPI-anchored protein LORELEI-like OS=Cucumis melo OX=3656 GN=LOC103490187 PE=4 S...	[more]
A0A6J1J2M4	4.0e-74	82.14	GPI-anchored protein LLG1-like OS=Cucurbita maxima OX=3661 GN=LOC111480694 PE=4 ...	[more]
A0A0A0K362	6.9e-74	84.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G186190 PE=4 SV=1	[more]

BLAST of Lsi02G017860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896951.1	6.4e-82	89.94	GPI-anchored protein LLG1-like [Benincasa hispida]	[more]
XP_022936417.1	5.9e-80	88.17	GPI-anchored protein LLG1 [Cucurbita moschata]	[more]
XP_023536509.1	1.0e-79	88.10	GPI-anchored protein LLG1-like [Cucurbita pepo subsp. pepo] >XP_023536510.1 GPI-...	[more]
XP_022976292.1	1.3e-79	87.57	GPI-anchored protein LLG1-like [Cucurbita maxima]	[more]
KAG6592129.1	2.3e-79	87.57	GPI-anchored protein LLG1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lsi02G017860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56170.1	4.7e-51	70.07	LORELEI-LIKE-GPI-ANCHORED PROTEIN 1	[more]
AT4G26466.1	5.8e-41	52.67	lorelei	[more]
AT4G28280.2	3.0e-37	51.28	LORELEI-LIKE-GPI ANCHORED PROTEIN 3	[more]
AT2G20700.1	4.8e-35	47.88	LORELEI-LIKE-GPI ANCHORED PROTEIN 2	[more]
AT4G28280.1	2.2e-32	52.99	LORELEI-LIKE-GPI ANCHORED PROTEIN 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31533:SF22	LORELEI-LIKE-GPI-ANCHORED PROTEIN	coord: 3..166
IPR039307	GPI-anchored protein LORELEI-like	PANTHER	PTHR31533	GPI-ANCHORED PROTEIN LLG1-RELATED-RELATED	coord: 3..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G017860.1	Lsi02G017860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane