
Lsi02G017510 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGAAACTTAAGTTGGGAAAAGGAGAAAATGAGAGTTACTTATTGAGTTGTAATAACTTCGTGGGAAGACAAACGTGGGACTTTGAAGCTGATGCAGGCACTCCAACACAGCGAGCTCAAGTAGAAGAAGCACGCCAATATTATTACCAAAATCGCCTCAAACTCCCATGCAGCAGTGACTTGTTTTGGCAATTTCAGGTTCTATCTTTACTATTATACTAA ATGTGGAAACTTAAGTTGGGAAAAGGAGAAAATGAGAGTTACTTATTGAGTTGTAATAACTTCGTGGGAAGACAAACGTGGGACTTTGAAGCTGATGCAGGCACTCCAACACAGCGAGCTCAAGTAGAAGAAGCACGCCAATATTATTACCAAAATCGCCTCAAACTCCCATGCAGCAGTGACTTGTTTTGGCAATTTCAGGTTCTATCTTTACTATTATACTAA ATGTGGAAACTTAAGTTGGGAAAAGGAGAAAATGAGAGTTACTTATTGAGTTGTAATAACTTCGTGGGAAGACAAACGTGGGACTTTGAAGCTGATGCAGGCACTCCAACACAGCGAGCTCAAGTAGAAGAAGCACGCCAATATTATTACCAAAATCGCCTCAAACTCCCATGCAGCAGTGACTTGTTTTGGCAATTTCAGGTTCTATCTTTACTATTATACTAA MWKLKLGKGENESYLLSCNNFVGRQTWDFEADAGTPTQRAQVEEARQYYYQNRLKLPCSSDLFWQFQVLSLLLY Homology
BLAST of Lsi02G017510 vs. ExPASy Swiss-Prot
Match: A8C981 (Taraxerol synthase OS=Rhizophora stylosa OX=98588 GN=M2 PE=2 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 7.8e-19 Identity = 42/69 (60.87%), Postives = 51/69 (73.91%), Query Frame = 0
BLAST of Lsi02G017510 vs. ExPASy Swiss-Prot
Match: A8CDT3 (Lupeol synthase OS=Bruguiera gymnorhiza OX=39984 GN=LUS PE=1 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 1.0e-18 Identity = 40/70 (57.14%), Postives = 55/70 (78.57%), Query Frame = 0
BLAST of Lsi02G017510 vs. ExPASy Swiss-Prot
Match: Q9LRH7 (Mixed-amyrin synthase OS=Pisum sativum OX=3888 GN=OSCPSM PE=1 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.7e-18 Identity = 39/69 (56.52%), Postives = 52/69 (75.36%), Query Frame = 0
BLAST of Lsi02G017510 vs. ExPASy Swiss-Prot
Match: Q9LRH8 (Beta-amyrin synthase OS=Pisum sativum OX=3888 GN=OSCPSY PE=2 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 8.6e-18 Identity = 38/69 (55.07%), Postives = 53/69 (76.81%), Query Frame = 0
BLAST of Lsi02G017510 vs. ExPASy Swiss-Prot
Match: A8C980 (Germanicol synthase OS=Rhizophora stylosa OX=98588 GN=M1 PE=1 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.1e-17 Identity = 38/69 (55.07%), Postives = 52/69 (75.36%), Query Frame = 0
BLAST of Lsi02G017510 vs. ExPASy TrEMBL
Match: A0A6J1G4P4 (Terpene cyclase/mutase family member OS=Cucurbita moschata OX=3662 GN=LOC111450753 PE=3 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 3.2e-23 Identity = 52/73 (71.23%), Postives = 61/73 (83.56%), Query Frame = 0
BLAST of Lsi02G017510 vs. ExPASy TrEMBL
Match: A0A6J1KEZ8 (Terpene cyclase/mutase family member OS=Cucurbita maxima OX=3661 GN=LOC111493705 PE=3 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 9.2e-23 Identity = 51/69 (73.91%), Postives = 58/69 (84.06%), Query Frame = 0
BLAST of Lsi02G017510 vs. ExPASy TrEMBL
Match: A0A6J1KGL7 (Terpene cyclase/mutase family member OS=Cucurbita maxima OX=3661 GN=LOC111493705 PE=3 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 9.2e-23 Identity = 51/69 (73.91%), Postives = 58/69 (84.06%), Query Frame = 0
BLAST of Lsi02G017510 vs. ExPASy TrEMBL
Match: A0A6J1KCM3 (Terpene cyclase/mutase family member OS=Cucurbita maxima OX=3661 GN=LOC111493703 PE=3 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 2.0e-22 Identity = 50/69 (72.46%), Postives = 57/69 (82.61%), Query Frame = 0
BLAST of Lsi02G017510 vs. ExPASy TrEMBL
Match: A0A6J1G4T6 (lupeol synthase-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111450753 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.7e-22 Identity = 50/69 (72.46%), Postives = 58/69 (84.06%), Query Frame = 0
BLAST of Lsi02G017510 vs. NCBI nr
Match: XP_022946792.1 (lupeol synthase-like isoform X3 [Cucurbita moschata]) HSP 1 Score: 117.1 bits (292), Expect = 6.5e-23 Identity = 52/73 (71.23%), Postives = 61/73 (83.56%), Query Frame = 0
BLAST of Lsi02G017510 vs. NCBI nr
Match: KAG6599054.1 (hypothetical protein SDJN03_08832, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 115.9 bits (289), Expect = 1.5e-22 Identity = 50/69 (72.46%), Postives = 58/69 (84.06%), Query Frame = 0
BLAST of Lsi02G017510 vs. NCBI nr
Match: XP_022999284.1 (beta-Amyrin Synthase 2-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 115.5 bits (288), Expect = 1.9e-22 Identity = 51/69 (73.91%), Postives = 58/69 (84.06%), Query Frame = 0
BLAST of Lsi02G017510 vs. NCBI nr
Match: XP_022999285.1 (beta-amyrin synthase-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 115.5 bits (288), Expect = 1.9e-22 Identity = 51/69 (73.91%), Postives = 58/69 (84.06%), Query Frame = 0
BLAST of Lsi02G017510 vs. NCBI nr
Match: KAG6599057.1 (hypothetical protein SDJN03_08835, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 115.2 bits (287), Expect = 2.5e-22 Identity = 51/69 (73.91%), Postives = 58/69 (84.06%), Query Frame = 0
BLAST of Lsi02G017510 vs. TAIR 10
Match: AT1G78960.1 (lupeol synthase 2 ) HSP 1 Score: 85.5 bits (210), Expect = 2.0e-17 Identity = 40/70 (57.14%), Postives = 50/70 (71.43%), Query Frame = 0
BLAST of Lsi02G017510 vs. TAIR 10
Match: AT1G78955.1 (camelliol C synthase 1 ) HSP 1 Score: 83.2 bits (204), Expect = 9.7e-17 Identity = 38/70 (54.29%), Postives = 50/70 (71.43%), Query Frame = 0
BLAST of Lsi02G017510 vs. TAIR 10
Match: AT1G78970.2 (lupeol synthase 1 ) HSP 1 Score: 82.4 bits (202), Expect = 1.7e-16 Identity = 39/70 (55.71%), Postives = 49/70 (70.00%), Query Frame = 0
BLAST of Lsi02G017510 vs. TAIR 10
Match: AT1G78970.1 (lupeol synthase 1 ) HSP 1 Score: 82.4 bits (202), Expect = 1.7e-16 Identity = 39/70 (55.71%), Postives = 49/70 (70.00%), Query Frame = 0
BLAST of Lsi02G017510 vs. TAIR 10
Match: AT1G78950.1 (Terpenoid cyclases family protein ) HSP 1 Score: 81.6 bits (200), Expect = 2.8e-16 Identity = 35/70 (50.00%), Postives = 49/70 (70.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|