Lsi02G017200 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G017200
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	rhomboid-like protein 19
Location	chr02: 22911110 .. 22915876 (-)
RNA-Seq Expression	Lsi02G017200
Synteny	Lsi02G017200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGTGGATTATCTACATGGTGTGCAGCATAATACGCTACACCTCATCGCACCCAATCACTCACATTTACGTTTCGATCTCCGAAGTTCCACTTCATCGAAGACCCACTCCCTCCCTTAACCCAAAAGTCTCCGGTGAAGCAAAACAGTCCATTTTTAGCTCGCAACTCCGATCACCGTCTCCACCGTTCACCGTGTCCGCCCATGAGTACTCCAGCAGTTCCGGGGGTACGCTCTGTTACAATTGTTTGTTTTAATCTCTTCTTAATTGCTGGTGTATCAGTCGCATTCAGATCTCGTAGTTCGTCTCTTCTATCTTCGAACGTGTATGCCAGATCTTGACATTTTCTCGAAATTCAGTAACGTTTCGATTGATGTTTTTGTTTTGTTTTTTTTCTTGTTTTGTGTTGTATTTGGACAGGGCTCTGGTTTGTTTACTGGATTCACCAAGCTATGCAAGGGCTTAGCGGTCGTGCTAATTGGCGGGCATATCTTGGTTCAGGTTTTTCCTGCGGTTGTTAACTATCTTGCCCTTATTCCAGCCAGGTATCTTGTTTGGAGAATTTAGTTTTTGGATTAGTGAGAGTGAAAACTGTGCGAAGCTGATGTAGTTTCATGGCTGAATCTAAGCGATGCGTACGTTCTTGAAGTAATGCCAGTAGGTTTCCGATTAGAAGTGTAATTGTCTTATCGAGTTGGAATTTAGTTAGGAAAGAATTTAGAATCTTGTGATCACTGATGAATGAATTACTGTGTAAGATAGGATTTCAGGCAGGGGGAAGGTATTTGTTACAAGTTTTGAATGTTACATTCTTGTGATCCAGAGGCTTGTTTTGTGGGATTGATGGTTAGTCAATAGTTTAGTTTCCATGCTTGGAAATGTGGTCATAATTGTAAATTGCAATGATTTTGTCAATTCCACTATTTAATTTATTGGCCAAACCATCCAAATACCGTTCTGCCCTTCTTCAGAACAAAACGTTTATGTTGATAGGAAGTAGCAACAGACCTTTTGAGAGGCTACACAATCTACTGCTTTAGGATGCCAATAGTTGCGTTGCAGAGGCATGAGTGTACTATTTTGATTTATAGAACTCTTTTTATTTTATTTTATTTCTTTTTTTGTAGTGAAGAATCCAAATATGTTATTATCTCCATGTAACCAGATGTTTTCACTACTAACATAACCCATCTGAATTATTGACTCTATGGAATAATTAGTGGAAGCACCCCCTACTTGAGTGTGAAATGTGAACCCCTTATCATTCTGAATTGGCTTAATTTCCTGATAGAAAAAAGGATACTTAGAAATATAGAAAAAGATGTCCTCAATAGAAAAAGGAAATTACAGAAAAAATCAAGCCATCTAGAGTAAAAATATGCAAAAATGAGCCCAAAATCTGAATTTCACACTTGTGGACCAACAATAGCAAGAGGTAGAATATTAATATCTGTTCTCCAAAACCTTCTCCATATGAATATTTTTGTTGGAAAATAAGTCTTCCTTTCCAACCAACCTACTCAACGAAGAGTTGAAATTGCATATACCCAATATGGCCTTGATCTTTTACTGGTCATCTTTTGAAGTCATTCTAATTATTAGAGCATGCACATCTCTTAGGGAAACCTAAAAAATATTTAATTTAGAAGTAAAATAACTCTGAATTCGCTGCAAAAATCAAAATGGAGAAAAATTTCACTTACCAAAGAAGCAAAGACCCATCAATTTAGTCAAGACATGATGACTGATGTGATCATATAGGTAATGAAACCTCAATCAACTGCAAGTCATGAGTTCTTGTCTACAGTGGACATACATTTAAACACTTAGTAGATTAGTTGAGATACTTGCCTATTCAGTTACAATGCAGTAAATACTAAATATGAAAGTCACGTAGGTAACTTTCCTCATGAGGAGACTTAATTTGGGCATGAAAAATTTGTATTTCTTTCTAATTGACTGTTCATCAAAATACCAAAATTGTCATTATCATTCAGTATTTATCAACACTTTCCACCTCTCACTTTCTTGTATATAGATTTATCAAGCCAAGTTCATATTGAATCTCCGACTCTTAAGTTGTTAAATTTTAATGGGAACTGTGTAAACTATAAAAGATGGTTGGGTCATTCGTTCCTTTGAACTTCTGTTTTGTAGGACAATTCCTTTTGCCTGGAATCTCTTAACTGCTGGTTATCTTGAACAGTCAATATATGGGGTATGCACCCACATTGTCGCACACTATTTTTTGTTCCATTTACAGAATAACAATTTGAATTTATCTCACCATTTCTTAGTCAGTCTCCACTTGAAGTTAGACTCATTGAGAGCAATATATTGCAGGTTGTTGTCAGCACAGTTGGCCTTCTTTTTGTTGGAAAGCTGCTTGAACCCATATGGGGCTCTAGAGAATTTTTGAAATTCATCTTTGTAGTCAATTTTCTAACTTCTTTATGCGTCTTTATCACAGCAATTGCCCTGTACTATATTACACAGGAGGAAAGTTATCTGTAAGTGCTACTTTGTCCTCGTGCATCAGGGGCACCTTTTAGGCATACTTGTGTACATGTCTTTAGCTGATTGAGCATTCTGCTGATTTCATCACTCAAAACTGTTTTAATCCATTTAGATTTCCATTCAAGTAAATTTTGTCTGATTCATTTCCATCTCAGTATTTTACAGTTTATCAGCTCCTCTCCTCTTTAAACATCTTATTTACATCTTTTCATGGTCTCAGTTATTTGCCTGTATCTGGTTTCTATGGGATTCTAGCTGGGTTCTTGGTTGGGATCAAGCAAATGATACCTGATCAAGAGTTGCCAGTATTGAAACTAAGAGCTAAGGTATGAAAAATGTAGATAGATATATCCTAATTTCGAATAATTTTTATCAGAGTTTTATTTGAACCCTCTTGTGGCCTTTGCTTGCAATTTCATGCAGTGGTTGCCATCTCTTGCTGTATTGGTATCCATTGCCGTAAGCTTTTGGACAACAGGAGCAGCAACATATCTTCCAACAATAATATTTGGGACATACATCAGCTGGATTTATCTGAGATACTGGCAGAGGAAACCTGAAGCAAAACTGAAAGGCGACCCAAGTGATGATTTTGCATTCTCTACATTCTTCCCTGAACTTTTACGGTATACTGTTTTTTTTAAGCCTTTTCTATTTTTAAGCATCTCTTTCCCATTTTTCAGGAATATTCTTTCTCTCTCTCCATAGTCCGTAATGTACTATGAGTCTTGATGGTTCTGTGCAGGCCAGTCATTGATCCAGTTGCATCAATATTTCATCGTCTGCTTTGTGGAAGATCTGAATCTCCTAACAGTGCTGAGGACTATACTGCTGGAGGCGCCCCGCTGCCCGGTTCAGATCCCATTGAGGCATCTAGAAGGAGGTAATATTTGTCATTGCTTCTCTCCTGACTCATAAGCTTGATCATAGTGTTTTCCACTATTAGCATGTTCTATAGTTTGTAGAAGGAACTGATTTAAGTAGCTATTTTTGTCTTAAATGGTTTGAGGTAGACAGGACAGAGCAAGAAATTACAACTAGTTGGAAAGAGTTTTAAATTTAAAATTTAAACATATCATTTTAAATTTTCTTTTGGGGCCAAATTAGGAGTTCTAAATTTGTTTTATTGTCTAGAAATTAGATGCTAAATTTAAAATTTTAAAAAAATTATGTATAAATTGCAAATTCAAATATTGTGTATCCTTCACCTCACTATATGCATCAACTACCTTCGTAGTGATGCTTCTCTCTTTATTTGCATCTTTTCATCGTCTCTATGCTTTTGACTGCACAAGATGTCCCCTATTAACCACCCACCTTGATGAACATTGTTGTCAGCACTTTTTCGAAAAGAAAACCATACAAAGGGTGGTGACAGGGTGTCAACCCACAGGGAAACCTTGAGGATTTTAAAATCAAAATCAAAAGAGAGGGTAATTTTGAATGGGCCCACTATTAAGTCCAAAAGGAAAGGATGGTAATTGCTGAACACTGGTCATTACAATTGTTTGTGAACAAATCATAACTTATAAAGGGCATTTAGATTGGAAGCTACAAAACCAAAAACAAAAGTAGTTTCTATCGGTGTTTCGTTTGTTGGTAGTGGAACTAGTTAACAACCTGCTCGTCACTGGCTATAGCAATAGTAAAGAATGATATAAACATAAAGGAAATGTGTGTATCAAAAAGTATAAAGGACTTAATGGAGAGAAGAGAATACTTATAAAATTTGAACATTCTACTCGTTTCAGAGAAAGGGGAGCTAGAGCTTTGGAAGAAAGACTGGCAGCTGAGAGATTGGCTGCAGCCAGAAGTGCTCAAGAGTCGGGAAGGGATGCAACAGAGAATGTCTGATTGATTATATAAGGTCATCTGATAGGGTCTATGTTTGTTGATTAACTTCATGATCAGATCCTCTTTTCTTTATTCTGAGATGCAATTTTGTTTTGCACATTCCTTGTGGTCCTTGAGTTACAAAAAAATGTTGCTTTGTTTGTGCTTTTTTGCAGCATTGGGGATTTATCTGTATACAGCCCGAGATATATGAGTAGAATTTCGACGGAAGTTTCTCTCGATTGATTTTGAAATAGTTAAAATCATATTTGTCACTTACAAATAACTTTGAAACATGTTTATAAATTTATTGTATGAAAATTACGTTTAAAAGTGTAAAATTGAACATTTAATTGATTTTGAATGTGGATTATGACATGCATGATTTGAAGTGATTTTAACTATTTTAAAACAA

mRNA sequence

ATGATGTGGATTATCTACATGGTGTGCAGCATAATACGCTACACCTCATCGCACCCAATCACTCACATTTACGTTTCGATCTCCGAAGTTCCACTTCATCGAAGACCCACTCCCTCCCTTAACCCAAAAGTCTCCGGTGAAGCAAAACAGTCCATTTTTAGCTCGCAACTCCGATCACCGTCTCCACCGTTCACCGTGTCCGCCCATGAGTACTCCAGCAGTTCCGGGGGGCTCTGGTTTGTTTACTGGATTCACCAAGCTATGCAAGGGCTTAGCGGTCGTGCTAATTGGCGGGCATATCTTGGTTCAGCTGATGTAGTTTCATGGCTGAATCTAAGCGATGCGTACGTTCTTGAAGTAATGCCAGTAGGATTTCAGGCAGGGGGAAGGACAATTCCTTTTGCCTGGAATCTCTTAACTGCTGGTTATCTTGAACAGTCAATATATGGGTCTCCACTTGAAGTTAGACTCATTGAGAGCAATATATTGCAGGTTGTTGTCAGCACAGTTGGCCTTCTTTTTGTTGGAAAGCTGCTTGAACCCATATGGGGCTCTAGAGAATTTTTGAAATTCATCTTTGTAGTCAATTTTCTAACTTCTTTATGCGTCTTTATCACAGCAATTGCCCTGTACTATATTACACAGGAGGAAAGTTATCTTTATTTGCCTGTATCTGGTTTCTATGGGATTCTAGCTGGGTTCTTGGTTGGGATCAAGCAAATGATACCTGATCAAGAGTTGCCAGTATTGAAACTAAGAGCTAAGTGGTTGCCATCTCTTGCTGTATTGGTATCCATTGCCGTAAGCTTTTGGACAACAGGAGCAGCAACATATCTTCCAACAATAATATTTGGGACATACATCAGCTGGATTTATCTGAGATACTGGCAGAGGAAACCTGAAGCAAAACTGAAAGGCGACCCAAGTGATGATTTTGCATTCTCTACATTCTTCCCTGAACTTTTACGGCCAGTCATTGATCCAGTTGCATCAATATTTCATCGTCTGCTTTGTGGAAGATCTGAATCTCCTAACAGTGCTGAGGACTATACTGCTGGAGGCGCCCCGCTGCCCGGTTCAGATCCCATTGAGGCATCTAGAAGGAGAGAAAGGGGAGCTAGAGCTTTGGAAGAAAGACTGGCAGCTGAGAGATTGGCTGCAGCCAGAAGTGCTCAAGAGTCGGGAAGGGATGCAACAGAGAATGTCTGATTGATTATATAAGCATTGGGGATTTATCTGTATACAGCCCGAGATATATGAGTAGAATTTCGACGGAAGTTTCTCTCGATTGATTTTGAAATAGTTAAAATCATATTTGTCACTTACAAATAACTTTGAAACATGTTTATAAATTTATTGTATGAAAATTACGTTTAAAAGTGTAAAATTGAACATTTAATTGATTTTGAATGTGGATTATGACATGCATGATTTGAAGTGATTTTAACTATTTTAAAACAA

Coding sequence (CDS)

ATGATGTGGATTATCTACATGGTGTGCAGCATAATACGCTACACCTCATCGCACCCAATCACTCACATTTACGTTTCGATCTCCGAAGTTCCACTTCATCGAAGACCCACTCCCTCCCTTAACCCAAAAGTCTCCGGTGAAGCAAAACAGTCCATTTTTAGCTCGCAACTCCGATCACCGTCTCCACCGTTCACCGTGTCCGCCCATGAGTACTCCAGCAGTTCCGGGGGGCTCTGGTTTGTTTACTGGATTCACCAAGCTATGCAAGGGCTTAGCGGTCGTGCTAATTGGCGGGCATATCTTGGTTCAGCTGATGTAGTTTCATGGCTGAATCTAAGCGATGCGTACGTTCTTGAAGTAATGCCAGTAGGATTTCAGGCAGGGGGAAGGACAATTCCTTTTGCCTGGAATCTCTTAACTGCTGGTTATCTTGAACAGTCAATATATGGGTCTCCACTTGAAGTTAGACTCATTGAGAGCAATATATTGCAGGTTGTTGTCAGCACAGTTGGCCTTCTTTTTGTTGGAAAGCTGCTTGAACCCATATGGGGCTCTAGAGAATTTTTGAAATTCATCTTTGTAGTCAATTTTCTAACTTCTTTATGCGTCTTTATCACAGCAATTGCCCTGTACTATATTACACAGGAGGAAAGTTATCTTTATTTGCCTGTATCTGGTTTCTATGGGATTCTAGCTGGGTTCTTGGTTGGGATCAAGCAAATGATACCTGATCAAGAGTTGCCAGTATTGAAACTAAGAGCTAAGTGGTTGCCATCTCTTGCTGTATTGGTATCCATTGCCGTAAGCTTTTGGACAACAGGAGCAGCAACATATCTTCCAACAATAATATTTGGGACATACATCAGCTGGATTTATCTGAGATACTGGCAGAGGAAACCTGAAGCAAAACTGAAAGGCGACCCAAGTGATGATTTTGCATTCTCTACATTCTTCCCTGAACTTTTACGGCCAGTCATTGATCCAGTTGCATCAATATTTCATCGTCTGCTTTGTGGAAGATCTGAATCTCCTAACAGTGCTGAGGACTATACTGCTGGAGGCGCCCCGCTGCCCGGTTCAGATCCCATTGAGGCATCTAGAAGGAGAGAAAGGGGAGCTAGAGCTTTGGAAGAAAGACTGGCAGCTGAGAGATTGGCTGCAGCCAGAAGTGCTCAAGAGTCGGGAAGGGATGCAACAGAGAATGTCTGA

Protein sequence

MMWIIYMVCSIIRYTSSHPITHIYVSISEVPLHRRPTPSLNPKVSGEAKQSIFSSQLRSPSPPFTVSAHEYSSSSGGLWFVYWIHQAMQGLSGRANWRAYLGSADVVSWLNLSDAYVLEVMPVGFQAGGRTIPFAWNLLTAGYLEQSIYGSPLEVRLIESNILQVVVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPVLKLRAKWLPSLAVLVSIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASIFHRLLCGRSESPNSAEDYTAGGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQESGRDATENV

Homology

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BLAST of Lsi02G017200 vs. ExPASy Swiss-Prot
Match: Q8LF05 (Rhomboid-like protein 19 OS=Arabidopsis thaliana OX=3702 GN=RBL19 PE=2 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 3.4e-100
Identity = 184/273 (67.40%), Postives = 218/273 (79.85%), Query Frame = 0


Query: 130 RTIPFAWNLLTAGYLEQSIYGSPLEVRLIESNILQVVVSTVGLLFVGKLLEPIWGSREFL 189
           RTIPFAWNL+T+GY E S+YG              VV STV LLF+GK LEP+WGS EFL
Sbjct: 46  RTIPFAWNLITSGYFELSVYG--------------VVFSTVSLLFMGKFLEPVWGSTEFL 105

Query: 190 KFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPV 249
           KFIFVVNFLT LCVF+TAIALYYIT+ E YLY+P +GF+G+LAG LVGIKQ+IPDQE+ +
Sbjct: 106 KFIFVVNFLTYLCVFVTAIALYYITRLEVYLYMPFAGFHGVLAGLLVGIKQIIPDQEILL 165

Query: 250 LKLRAKWLPSLAVLVSIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS 309
           LK++AKWLPS+ +++SIA SF+T  +A YLPT+IFGTY+ W+YLRY QR+PE KL+GDPS
Sbjct: 166 LKIKAKWLPSIMLILSIASSFFTLDSAAYLPTLIFGTYMGWLYLRYLQRRPETKLRGDPS 225

Query: 310 DDFAFSTFFPELLRPVIDPVASIFHRLLCGRSESPNSAEDYTAGGAPLPGSDPIEASRRR 369
           DDFAFSTFFPELLRPVIDP+A IFHR+LCGRS + +   DY+  GAPLPGSD  EASRRR
Sbjct: 226 DDFAFSTFFPELLRPVIDPIALIFHRMLCGRSNATSEDHDYSTSGAPLPGSDSAEASRRR 285

Query: 370 ERGARALEERLAAERLAAARSAQESGRDATENV 403
           ERGARALEERL  ERL  AR+  E   D  +NV
Sbjct: 286 ERGARALEERLGTERLVPARNKDELQSDGLDNV 304

[Close]

BLAST of Lsi02G017200 vs. ExPASy Swiss-Prot
Match: Q9WUH1 (Transmembrane protein 115 OS=Mus musculus OX=10090 GN=Tmem115 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 3.2e-26
Identity = 84/252 (33.33%), Postives = 130/252 (51.59%), Query Frame = 0


Query: 136 WNLLTAGYLEQSIYGSPLEVRLIESNILQVVVSTVGLLFVGKLLEPIWGSREFLKFIFVV 195
           W L T G +EQ ++               V +S   ++  G+LLEP+WG+ E L F  VV
Sbjct: 60  WTLATHGLMEQHVW--------------DVAISLATVVVAGRLLEPLWGALELLIFFSVV 119

Query: 196 NFLTSLCVFITAIALYYITQEESYLY-LPVSGFYGILAGFLVGIKQMIPD-QELPVLKLR 255
           N    L   +  +  Y  +    YL+ + + G  G L G LV +KQ + D   L V ++R
Sbjct: 120 NVSVGLLGALAYLLTYMASFNLVYLFTIRIHGALGFLGGVLVALKQTMGDCVVLRVPQVR 179

Query: 256 AKWLPSLAVLVSIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFA 315
              +P L + + + +   T   +  L +  FG   SW+YLR++QR   ++ +GD +D FA
Sbjct: 180 VSVVPMLLLALLLLLRLATLLQSPALASYGFGLLSSWVYLRFYQR--HSRGRGDMADHFA 239

Query: 316 FSTFFPELLRPVIDPVASIFHRLLCGRSESPNSAEDYTAGG-----APLPGSDPIEASRR 375
           F+TFFPE+L+PV+  +A++ H LL        + + Y  G        LPG+DP +A RR
Sbjct: 240 FATFFPEILQPVVGLLANLVHGLLVKVKICQKTVKRYDVGAPSSITISLPGTDPQDAERR 295

Query: 376 RERGARALEERL 381
           R+   +AL ERL
Sbjct: 300 RQLALKALNERL 295

[Close]

BLAST of Lsi02G017200 vs. ExPASy Swiss-Prot
Match: Q12893 (Transmembrane protein 115 OS=Homo sapiens OX=9606 GN=TMEM115 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 4.2e-26
Identity = 84/252 (33.33%), Postives = 129/252 (51.19%), Query Frame = 0


Query: 136 WNLLTAGYLEQSIYGSPLEVRLIESNILQVVVSTVGLLFVGKLLEPIWGSREFLKFIFVV 195
           W L T G +EQ ++               V +S   ++  G+LLEP+WG+ E L F  VV
Sbjct: 60  WTLATHGLMEQHVW--------------DVAISLTTVVVAGRLLEPLWGALELLIFFSVV 119

Query: 196 NFLTSLCVFITAIALYYITQEESYLY-LPVSGFYGILAGFLVGIKQMIPD-QELPVLKLR 255
           N    L      +  Y  +    YL+ + + G  G L G LV +KQ + D   L V ++R
Sbjct: 120 NVSVGLLGAFAYLLTYMASFNLVYLFTVRIHGALGFLGGVLVALKQTMGDCVVLRVPQVR 179

Query: 256 AKWLPSLAVLVSIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFA 315
              +P L + + + +   T   +  L +  FG   SW+YLR++QR   ++ +GD +D FA
Sbjct: 180 VSVMPMLLLALLLLLRLATLLQSPALASYGFGLLSSWVYLRFYQR--HSRGRGDMADHFA 239

Query: 316 FSTFFPELLRPVIDPVASIFHRLLCGRSESPNSAEDYTAGG-----APLPGSDPIEASRR 375
           F+TFFPE+L+PV+  +A++ H LL        + + Y  G        LPG+DP +A RR
Sbjct: 240 FATFFPEILQPVVGLLANLVHSLLVKVKICQKTVKRYDVGAPSSITISLPGTDPQDAERR 295

Query: 376 RERGARALEERL 381
           R+   +AL ERL
Sbjct: 300 RQLALKALNERL 295

[Close]

BLAST of Lsi02G017200 vs. ExPASy Swiss-Prot
Match: A4FUB8 (Transmembrane protein 115 OS=Bos taurus OX=9913 GN=TMEM115 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.6e-25
Identity = 84/252 (33.33%), Postives = 129/252 (51.19%), Query Frame = 0


Query: 136 WNLLTAGYLEQSIYGSPLEVRLIESNILQVVVSTVGLLFVGKLLEPIWGSREFLKFIFVV 195
           W L T G +EQ ++               V +S   ++  G+LLEP+WG+ E L F  VV
Sbjct: 60  WTLATHGLMEQHVW--------------DVAISLATVVVAGRLLEPLWGALELLIFFSVV 119

Query: 196 NFLTSLCVFITAIALYYITQEESYLY-LPVSGFYGILAGFLVGIKQMIPD-QELPVLKLR 255
           N    L      +  Y  +    YL+ + + G  G L G LV +KQ + D   L V ++R
Sbjct: 120 NVSVGLLGAFAYLLTYMASFNLVYLFTVRIHGALGFLGGVLVALKQTMGDCVVLRVPQVR 179

Query: 256 AKWLPSLAVLVSIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFA 315
              +P L + + + +   T   +  L +  FG   SW+YLR++QR   ++ +GD +D FA
Sbjct: 180 VSVVPMLLLGLLLLLRLATLLQSPALASYGFGLISSWVYLRFYQR--HSRGRGDMADHFA 239

Query: 316 FSTFFPELLRPVIDPVASIFHRLLCGRSESPNSAEDYTAGG-----APLPGSDPIEASRR 375
           F+TFFPE+L+PV+  +A++ H LL        + + Y  G        LPG+DP +A RR
Sbjct: 240 FATFFPEILQPVVGLLANLVHGLLVKVKICQKTVKRYDVGAPSSITISLPGTDPQDAERR 295

Query: 376 RERGARALEERL 381
           R+   +AL ERL
Sbjct: 300 RQLALKALNERL 295

[Close]

BLAST of Lsi02G017200 vs. ExPASy Swiss-Prot
Match: Q12239 (Transmembrane protein 115 homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YOL107W PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 6.5e-11
Identity = 72/281 (25.62%), Postives = 127/281 (45.20%), Query Frame = 0


Query: 136 WNLLTAGYLE---QSIYGSPLEVRL---IESNILQVVVSTVGLLFVGKLLEPIW-GSREF 195
           +NL+T+  L+     I+  P  + L   I++   +VVV+ + L+  G  +E  W  S+E 
Sbjct: 60  YNLITSPLLQMVPSQIWRYPTSLVLSNFIDTKAWKVVVNLLNLIIGGSFIERNWNSSKEM 119

Query: 196 LKFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELP 255
            KFI V+  LT++ + +  + + + + +   L +P+ G Y IL GF +  +Q++P+  + 
Sbjct: 120 FKFIIVLGSLTNVLIIMLTLLVSFFSNKVR-LDIPLDGNYTILIGFPIIYRQLLPETTII 179

Query: 256 VLK--------LRAKWLPSLAVLVSIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKP 315
            LK         R K LP   +                L +I    + SW YLR++Q+  
Sbjct: 180 HLKTPQFLAKNFRFKLLPIFVMFTMTVTQIIWFHHFAQLFSIWVTFFASWSYLRFFQKLA 239

Query: 316 ---------------EAKLKGDPSDDFAFSTFFPELLRPVIDPVASIFHRLLCGRSE--S 375
                          +  L GD SD F    FFP+L++P++ P+ +  + ++  + +   
Sbjct: 240 PLNCPSLPTTNSQGGQEILVGDASDTFQLIYFFPDLIKPILRPIFNFIYNVVVVKFKVIK 299

Query: 376 PNSAEDYTAGG--APLPGSDPIEA--SRRRERGARALEERL 381
           P    D   G   A   G+  I     RRR+   + LEER+
Sbjct: 300 PFHDIDIDIGNTIAESRGAKKIMTVEERRRQLALQVLEERM 339

[Close]

BLAST of Lsi02G017200 vs. ExPASy TrEMBL
Match: A0A0A0KQN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G491820 PE=4 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 5.3e-133
Identity = 249/273 (91.21%), Postives = 258/273 (94.51%), Query Frame = 0


Query: 130 RTIPFAWNLLTAGYLEQSIYGSPLEVRLIESNILQVVVSTVGLLFVGKLLEPIWGSREFL 189
           RTIPFAWNLLTAGY+EQSIYG              VVVSTVGLLFVGKLLEPIWGSREFL
Sbjct: 50  RTIPFAWNLLTAGYIEQSIYG--------------VVVSTVGLLFVGKLLEPIWGSREFL 109

Query: 190 KFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPV 249
           KFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPV
Sbjct: 110 KFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPV 169

Query: 250 LKLRAKWLPSLAVLVSIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS 309
           LKL+AKWLPSLAVL+SIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS
Sbjct: 170 LKLKAKWLPSLAVLLSIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS 229

Query: 310 DDFAFSTFFPELLRPVIDPVASIFHRLLCGRSESPNSAEDYTAGGAPLPGSDPIEASRRR 369
           DDFAFSTFFPELLRPVIDP+ASIFHR+LCGRSESP++AEDYTA GAPLPGSDP+EASRRR
Sbjct: 230 DDFAFSTFFPELLRPVIDPIASIFHRMLCGRSESPDNAEDYTAAGAPLPGSDPVEASRRR 289

Query: 370 ERGARALEERLAAERLAAARSAQESGRDATENV 403
           ERGARALEERLAAERLAAARSAQESG+DATENV
Sbjct: 290 ERGARALEERLAAERLAAARSAQESGKDATENV 308

[Close]

BLAST of Lsi02G017200 vs. ExPASy TrEMBL
Match: A0A5D3C5G3 (Rhomboid-like protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00860 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 5.9e-132
Identity = 248/273 (90.84%), Postives = 257/273 (94.14%), Query Frame = 0


Query: 130 RTIPFAWNLLTAGYLEQSIYGSPLEVRLIESNILQVVVSTVGLLFVGKLLEPIWGSREFL 189
           RTIPFAWNLLTAGY+EQSIYG              VVVSTVGLLFVGKLLEPIWGSREFL
Sbjct: 50  RTIPFAWNLLTAGYIEQSIYG--------------VVVSTVGLLFVGKLLEPIWGSREFL 109

Query: 190 KFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPV 249
           KFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPV
Sbjct: 110 KFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPV 169

Query: 250 LKLRAKWLPSLAVLVSIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS 309
           LKL+AKWLPS+AVLVSIA+SFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS
Sbjct: 170 LKLKAKWLPSVAVLVSIAISFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS 229

Query: 310 DDFAFSTFFPELLRPVIDPVASIFHRLLCGRSESPNSAEDYTAGGAPLPGSDPIEASRRR 369
           DDFAFSTFFPELLRPVIDP+ASIFHR+LCGRSES ++AEDYTA GAPLPGSDPIEASRRR
Sbjct: 230 DDFAFSTFFPELLRPVIDPIASIFHRMLCGRSESRDNAEDYTAAGAPLPGSDPIEASRRR 289

Query: 370 ERGARALEERLAAERLAAARSAQESGRDATENV 403
           ERGARALEERLAAERLAAARSAQESG+DATENV
Sbjct: 290 ERGARALEERLAAERLAAARSAQESGKDATENV 308

[Close]

BLAST of Lsi02G017200 vs. ExPASy TrEMBL
Match: A0A1S3CPF3 (rhomboid-like protein 19 OS=Cucumis melo OX=3656 GN=LOC103503313 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 5.9e-132
Identity = 248/273 (90.84%), Postives = 257/273 (94.14%), Query Frame = 0


Query: 130 RTIPFAWNLLTAGYLEQSIYGSPLEVRLIESNILQVVVSTVGLLFVGKLLEPIWGSREFL 189
           RTIPFAWNLLTAGY+EQSIYG              VVVSTVGLLFVGKLLEPIWGSREFL
Sbjct: 50  RTIPFAWNLLTAGYIEQSIYG--------------VVVSTVGLLFVGKLLEPIWGSREFL 109

Query: 190 KFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPV 249
           KFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPV
Sbjct: 110 KFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPV 169

Query: 250 LKLRAKWLPSLAVLVSIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS 309
           LKL+AKWLPS+AVLVSIA+SFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS
Sbjct: 170 LKLKAKWLPSVAVLVSIAISFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS 229

Query: 310 DDFAFSTFFPELLRPVIDPVASIFHRLLCGRSESPNSAEDYTAGGAPLPGSDPIEASRRR 369
           DDFAFSTFFPELLRPVIDP+ASIFHR+LCGRSES ++AEDYTA GAPLPGSDPIEASRRR
Sbjct: 230 DDFAFSTFFPELLRPVIDPIASIFHRMLCGRSESRDNAEDYTAAGAPLPGSDPIEASRRR 289

Query: 370 ERGARALEERLAAERLAAARSAQESGRDATENV 403
           ERGARALEERLAAERLAAARSAQESG+DATENV
Sbjct: 290 ERGARALEERLAAERLAAARSAQESGKDATENV 308

[Close]

BLAST of Lsi02G017200 vs. ExPASy TrEMBL
Match: A0A6J1C1K7 (rhomboid-like protein 19 OS=Momordica charantia OX=3673 GN=LOC111006580 PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 8.5e-131
Identity = 244/273 (89.38%), Postives = 255/273 (93.41%), Query Frame = 0


Query: 130 RTIPFAWNLLTAGYLEQSIYGSPLEVRLIESNILQVVVSTVGLLFVGKLLEPIWGSREFL 189
           RTIPFAWNLLTAGY+EQS+YG              VV ST+GLLFVGKLLEPIWGSREFL
Sbjct: 50  RTIPFAWNLLTAGYVEQSVYG--------------VVASTIGLLFVGKLLEPIWGSREFL 109

Query: 190 KFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPV 249
           KFIFVVNFLTSLCVFITAIALYYITQEESYLY+P+SGFYGILAGFLVGIKQ+IPDQELP+
Sbjct: 110 KFIFVVNFLTSLCVFITAIALYYITQEESYLYMPISGFYGILAGFLVGIKQIIPDQELPL 169

Query: 250 LKLRAKWLPSLAVLVSIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS 309
           LKLRAKWLPSLA+LVSIAVSFWT GAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS
Sbjct: 170 LKLRAKWLPSLALLVSIAVSFWTVGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS 229

Query: 310 DDFAFSTFFPELLRPVIDPVASIFHRLLCGRSESPNSAEDYTAGGAPLPGSDPIEASRRR 369
           DDFAFSTFFPELLRPVIDPVASIFHRLLCGRSES N+A+DYT GGAPLPGSDPIEASRRR
Sbjct: 230 DDFAFSTFFPELLRPVIDPVASIFHRLLCGRSESSNNADDYTVGGAPLPGSDPIEASRRR 289

Query: 370 ERGARALEERLAAERLAAARSAQESGRDATENV 403
           ERGARALEERLAAERLAAARSAQESGRDAT+NV
Sbjct: 290 ERGARALEERLAAERLAAARSAQESGRDATDNV 308

[Close]

BLAST of Lsi02G017200 vs. ExPASy TrEMBL
Match: A0A6J1JXD8 (rhomboid-like protein 19 OS=Cucurbita maxima OX=3661 GN=LOC111489172 PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 4.2e-130
Identity = 244/273 (89.38%), Postives = 253/273 (92.67%), Query Frame = 0


Query: 130 RTIPFAWNLLTAGYLEQSIYGSPLEVRLIESNILQVVVSTVGLLFVGKLLEPIWGSREFL 189
           RTIPFAWNLLTAGY+EQS+YG              VVVSTVGLLFVGKLLEPIWGSREFL
Sbjct: 50  RTIPFAWNLLTAGYVEQSVYG--------------VVVSTVGLLFVGKLLEPIWGSREFL 109

Query: 190 KFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPV 249
           KFIF+VNFLTSLCVFITAIALYYI QEE YLY PVSGFYGILAGFLVGIKQ+IPDQELPV
Sbjct: 110 KFIFIVNFLTSLCVFITAIALYYIMQEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPV 169

Query: 250 LKLRAKWLPSLAVLVSIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS 309
           LKLRAKWLPSLAV VSIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS
Sbjct: 170 LKLRAKWLPSLAVFVSIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS 229

Query: 310 DDFAFSTFFPELLRPVIDPVASIFHRLLCGRSESPNSAEDYTAGGAPLPGSDPIEASRRR 369
           DDFAFSTFFPELLRPVIDPVAS+FHRLLCGRSESPN+AEDYTAGG PLPGSDPIEASRRR
Sbjct: 230 DDFAFSTFFPELLRPVIDPVASVFHRLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRR 289

Query: 370 ERGARALEERLAAERLAAARSAQESGRDATENV 403
           ERGARALEERLAAE+LAAAR AQESGRDAT++V
Sbjct: 290 ERGARALEERLAAEKLAAARIAQESGRDATDSV 308

[Close]

BLAST of Lsi02G017200 vs. NCBI nr
Match: XP_038890538.1 (rhomboid-like protein 19 isoform X1 [Benincasa hispida])

HSP 1 Score: 486.5 bits (1251), Expect = 2.2e-133
Identity = 251/273 (91.94%), Postives = 258/273 (94.51%), Query Frame = 0


Query: 130 RTIPFAWNLLTAGYLEQSIYGSPLEVRLIESNILQVVVSTVGLLFVGKLLEPIWGSREFL 189
           RTIPFAWNLLTAGY+EQS+YG              VVVSTVGLLFVGKLLEPIWGSREFL
Sbjct: 50  RTIPFAWNLLTAGYIEQSVYG--------------VVVSTVGLLFVGKLLEPIWGSREFL 109

Query: 190 KFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPV 249
           KFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPV
Sbjct: 110 KFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPV 169

Query: 250 LKLRAKWLPSLAVLVSIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS 309
           LKLRAKWLPSLAVLVS+AVSFWTTGAATYLPTIIFGTY+SWIYLRYWQRKPEAKLKGDPS
Sbjct: 170 LKLRAKWLPSLAVLVSVAVSFWTTGAATYLPTIIFGTYVSWIYLRYWQRKPEAKLKGDPS 229

Query: 310 DDFAFSTFFPELLRPVIDPVASIFHRLLCGRSESPNSAEDYTAGGAPLPGSDPIEASRRR 369
           DDFAFSTFFPELLRPVIDPVASIF+RLLCGRSESPN+AEDYTAG APLPGSDPIEASRRR
Sbjct: 230 DDFAFSTFFPELLRPVIDPVASIFYRLLCGRSESPNNAEDYTAGSAPLPGSDPIEASRRR 289

Query: 370 ERGARALEERLAAERLAAARSAQESGRDATENV 403
           ERGARALEERLAAERLAA+RSAQESGRDATENV
Sbjct: 290 ERGARALEERLAAERLAASRSAQESGRDATENV 308

[Close]

BLAST of Lsi02G017200 vs. NCBI nr
Match: XP_038890539.1 (rhomboid-like protein 19 isoform X2 [Benincasa hispida])

HSP 1 Score: 486.5 bits (1251), Expect = 2.2e-133
Identity = 251/273 (91.94%), Postives = 258/273 (94.51%), Query Frame = 0


Query: 130 RTIPFAWNLLTAGYLEQSIYGSPLEVRLIESNILQVVVSTVGLLFVGKLLEPIWGSREFL 189
           RTIPFAWNLLTAGY+EQS+YG              VVVSTVGLLFVGKLLEPIWGSREFL
Sbjct: 40  RTIPFAWNLLTAGYIEQSVYG--------------VVVSTVGLLFVGKLLEPIWGSREFL 99

Query: 190 KFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPV 249
           KFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPV
Sbjct: 100 KFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPV 159

Query: 250 LKLRAKWLPSLAVLVSIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS 309
           LKLRAKWLPSLAVLVS+AVSFWTTGAATYLPTIIFGTY+SWIYLRYWQRKPEAKLKGDPS
Sbjct: 160 LKLRAKWLPSLAVLVSVAVSFWTTGAATYLPTIIFGTYVSWIYLRYWQRKPEAKLKGDPS 219

Query: 310 DDFAFSTFFPELLRPVIDPVASIFHRLLCGRSESPNSAEDYTAGGAPLPGSDPIEASRRR 369
           DDFAFSTFFPELLRPVIDPVASIF+RLLCGRSESPN+AEDYTAG APLPGSDPIEASRRR
Sbjct: 220 DDFAFSTFFPELLRPVIDPVASIFYRLLCGRSESPNNAEDYTAGSAPLPGSDPIEASRRR 279

Query: 370 ERGARALEERLAAERLAAARSAQESGRDATENV 403
           ERGARALEERLAAERLAA+RSAQESGRDATENV
Sbjct: 280 ERGARALEERLAAERLAASRSAQESGRDATENV 298

[Close]

BLAST of Lsi02G017200 vs. NCBI nr
Match: XP_004143801.1 (rhomboid-like protein 19 [Cucumis sativus] >KGN51209.1 hypothetical protein Csa_009262 [Cucumis sativus])

HSP 1 Score: 484.2 bits (1245), Expect = 1.1e-132
Identity = 249/273 (91.21%), Postives = 258/273 (94.51%), Query Frame = 0


Query: 130 RTIPFAWNLLTAGYLEQSIYGSPLEVRLIESNILQVVVSTVGLLFVGKLLEPIWGSREFL 189
           RTIPFAWNLLTAGY+EQSIYG              VVVSTVGLLFVGKLLEPIWGSREFL
Sbjct: 50  RTIPFAWNLLTAGYIEQSIYG--------------VVVSTVGLLFVGKLLEPIWGSREFL 109

Query: 190 KFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPV 249
           KFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPV
Sbjct: 110 KFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPV 169

Query: 250 LKLRAKWLPSLAVLVSIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS 309
           LKL+AKWLPSLAVL+SIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS
Sbjct: 170 LKLKAKWLPSLAVLLSIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS 229

Query: 310 DDFAFSTFFPELLRPVIDPVASIFHRLLCGRSESPNSAEDYTAGGAPLPGSDPIEASRRR 369
           DDFAFSTFFPELLRPVIDP+ASIFHR+LCGRSESP++AEDYTA GAPLPGSDP+EASRRR
Sbjct: 230 DDFAFSTFFPELLRPVIDPIASIFHRMLCGRSESPDNAEDYTAAGAPLPGSDPVEASRRR 289

Query: 370 ERGARALEERLAAERLAAARSAQESGRDATENV 403
           ERGARALEERLAAERLAAARSAQESG+DATENV
Sbjct: 290 ERGARALEERLAAERLAAARSAQESGKDATENV 308

[Close]

BLAST of Lsi02G017200 vs. NCBI nr
Match: XP_008465676.1 (PREDICTED: rhomboid-like protein 19 [Cucumis melo] >KAA0040585.1 rhomboid-like protein 19 [Cucumis melo var. makuwa] >TYK05626.1 rhomboid-like protein 19 [Cucumis melo var. makuwa])

HSP 1 Score: 480.7 bits (1236), Expect = 1.2e-131
Identity = 248/273 (90.84%), Postives = 257/273 (94.14%), Query Frame = 0


Query: 130 RTIPFAWNLLTAGYLEQSIYGSPLEVRLIESNILQVVVSTVGLLFVGKLLEPIWGSREFL 189
           RTIPFAWNLLTAGY+EQSIYG              VVVSTVGLLFVGKLLEPIWGSREFL
Sbjct: 50  RTIPFAWNLLTAGYIEQSIYG--------------VVVSTVGLLFVGKLLEPIWGSREFL 109

Query: 190 KFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPV 249
           KFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPV
Sbjct: 110 KFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPV 169

Query: 250 LKLRAKWLPSLAVLVSIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS 309
           LKL+AKWLPS+AVLVSIA+SFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS
Sbjct: 170 LKLKAKWLPSVAVLVSIAISFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS 229

Query: 310 DDFAFSTFFPELLRPVIDPVASIFHRLLCGRSESPNSAEDYTAGGAPLPGSDPIEASRRR 369
           DDFAFSTFFPELLRPVIDP+ASIFHR+LCGRSES ++AEDYTA GAPLPGSDPIEASRRR
Sbjct: 230 DDFAFSTFFPELLRPVIDPIASIFHRMLCGRSESRDNAEDYTAAGAPLPGSDPIEASRRR 289

Query: 370 ERGARALEERLAAERLAAARSAQESGRDATENV 403
           ERGARALEERLAAERLAAARSAQESG+DATENV
Sbjct: 290 ERGARALEERLAAERLAAARSAQESGKDATENV 308

[Close]

BLAST of Lsi02G017200 vs. NCBI nr
Match: XP_023551332.1 (rhomboid-like protein 19 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 480.3 bits (1235), Expect = 1.6e-131
Identity = 247/273 (90.48%), Postives = 255/273 (93.41%), Query Frame = 0


Query: 130 RTIPFAWNLLTAGYLEQSIYGSPLEVRLIESNILQVVVSTVGLLFVGKLLEPIWGSREFL 189
           RTIPFAWNLLTAGY+EQS+YG              VVVSTVGLLFVGKLLEPIWGSREFL
Sbjct: 50  RTIPFAWNLLTAGYVEQSVYG--------------VVVSTVGLLFVGKLLEPIWGSREFL 109

Query: 190 KFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPV 249
           KFIF+VNFLTSLCVFITAIALYYITQEE YLY PVSGFYGILAGFLVGIKQ+IPDQELPV
Sbjct: 110 KFIFIVNFLTSLCVFITAIALYYITQEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPV 169

Query: 250 LKLRAKWLPSLAVLVSIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS 309
           LKLRAKWLPSLAV VSIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS
Sbjct: 170 LKLRAKWLPSLAVFVSIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS 229

Query: 310 DDFAFSTFFPELLRPVIDPVASIFHRLLCGRSESPNSAEDYTAGGAPLPGSDPIEASRRR 369
           DDFAFSTFFPELLRPVIDPVAS+FHRLLCGRSESPN+AEDYTAGG PLPGSDPIEASRRR
Sbjct: 230 DDFAFSTFFPELLRPVIDPVASVFHRLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRR 289

Query: 370 ERGARALEERLAAERLAAARSAQESGRDATENV 403
           ERGARALEERLAAERLAAARSAQESGRDAT++V
Sbjct: 290 ERGARALEERLAAERLAAARSAQESGRDATDSV 308

[Close]

BLAST of Lsi02G017200 vs. TAIR 10
Match: AT3G07950.1 (rhomboid protein-related )

HSP 1 Score: 366.7 bits (940), Expect = 2.4e-101
Identity = 184/273 (67.40%), Postives = 218/273 (79.85%), Query Frame = 0


Query: 130 RTIPFAWNLLTAGYLEQSIYGSPLEVRLIESNILQVVVSTVGLLFVGKLLEPIWGSREFL 189
           RTIPFAWNL+T+GY E S+YG              VV STV LLF+GK LEP+WGS EFL
Sbjct: 46  RTIPFAWNLITSGYFELSVYG--------------VVFSTVSLLFMGKFLEPVWGSTEFL 105

Query: 190 KFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPV 249
           KFIFVVNFLT LCVF+TAIALYYIT+ E YLY+P +GF+G+LAG LVGIKQ+IPDQE+ +
Sbjct: 106 KFIFVVNFLTYLCVFVTAIALYYITRLEVYLYMPFAGFHGVLAGLLVGIKQIIPDQEILL 165

Query: 250 LKLRAKWLPSLAVLVSIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPS 309
           LK++AKWLPS+ +++SIA SF+T  +A YLPT+IFGTY+ W+YLRY QR+PE KL+GDPS
Sbjct: 166 LKIKAKWLPSIMLILSIASSFFTLDSAAYLPTLIFGTYMGWLYLRYLQRRPETKLRGDPS 225

Query: 310 DDFAFSTFFPELLRPVIDPVASIFHRLLCGRSESPNSAEDYTAGGAPLPGSDPIEASRRR 369
           DDFAFSTFFPELLRPVIDP+A IFHR+LCGRS + +   DY+  GAPLPGSD  EASRRR
Sbjct: 226 DDFAFSTFFPELLRPVIDPIALIFHRMLCGRSNATSEDHDYSTSGAPLPGSDSAEASRRR 285

Query: 370 ERGARALEERLAAERLAAARSAQESGRDATENV 403
           ERGARALEERL  ERL  AR+  E   D  +NV
Sbjct: 286 ERGARALEERLGTERLVPARNKDELQSDGLDNV 304

The following BLAST results are available for this feature:

BLAST of Lsi02G017200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LF05	3.4e-100	67.40	Rhomboid-like protein 19 OS=Arabidopsis thaliana OX=3702 GN=RBL19 PE=2 SV=1	[more]
Q9WUH1	3.2e-26	33.33	Transmembrane protein 115 OS=Mus musculus OX=10090 GN=Tmem115 PE=1 SV=1	[more]
Q12893	4.2e-26	33.33	Transmembrane protein 115 OS=Homo sapiens OX=9606 GN=TMEM115 PE=1 SV=1	[more]
A4FUB8	1.6e-25	33.33	Transmembrane protein 115 OS=Bos taurus OX=9913 GN=TMEM115 PE=2 SV=1	[more]
Q12239	6.5e-11	25.62	Transmembrane protein 115 homolog OS=Saccharomyces cerevisiae (strain ATCC 20450...	[more]

BLAST of Lsi02G017200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQN7	5.3e-133	91.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G491820 PE=4 SV=1	[more]
A0A5D3C5G3	5.9e-132	90.84	Rhomboid-like protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CPF3	5.9e-132	90.84	rhomboid-like protein 19 OS=Cucumis melo OX=3656 GN=LOC103503313 PE=4 SV=1	[more]
A0A6J1C1K7	8.5e-131	89.38	rhomboid-like protein 19 OS=Momordica charantia OX=3673 GN=LOC111006580 PE=4 SV=...	[more]
A0A6J1JXD8	4.2e-130	89.38	rhomboid-like protein 19 OS=Cucurbita maxima OX=3661 GN=LOC111489172 PE=4 SV=1	[more]

BLAST of Lsi02G017200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890538.1	2.2e-133	91.94	rhomboid-like protein 19 isoform X1 [Benincasa hispida]	[more]
XP_038890539.1	2.2e-133	91.94	rhomboid-like protein 19 isoform X2 [Benincasa hispida]	[more]
XP_004143801.1	1.1e-132	91.21	rhomboid-like protein 19 [Cucumis sativus] >KGN51209.1 hypothetical protein Csa_...	[more]
XP_008465676.1	1.2e-131	90.84	PREDICTED: rhomboid-like protein 19 [Cucumis melo] >KAA0040585.1 rhomboid-like p...	[more]
XP_023551332.1	1.6e-131	90.48	rhomboid-like protein 19 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi02G017200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07950.1	2.4e-101	67.40	rhomboid protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM01160	DUF1751_2	coord: 128..240 e-value: 2.3E-36 score: 136.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 347..371
None	No IPR available	PANTHER	PTHR13377:SF9	RHOMBOID-LIKE PROTEIN 19	coord: 129..402
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 75..304 e-value: 9.7E-6 score: 27.3
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 157..300
IPR013861	TMEM115/Pdh1/Rbl19	PFAM	PF08551	DUF1751	coord: 156..240 e-value: 1.7E-26 score: 92.7
IPR013861	TMEM115/Pdh1/Rbl19	PANTHER	PTHR13377	PLACENTAL PROTEIN 6	coord: 129..402

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G017200.1	Lsi02G017200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane