Homology
BLAST of Lsi02G016960 vs. ExPASy Swiss-Prot
Match:
Q9FLJ4 (Pentatricopeptide repeat-containing protein At5g61400 OS=Arabidopsis thaliana OX=3702 GN=At5g61400 PE=2 SV=1)
HSP 1 Score: 536.6 bits (1381), Expect = 3.9e-151
Identity = 272/601 (45.26%), Postives = 393/601 (65.39%), Query Frame = 0
Query: 28 NAKLSFAMNGLQK---KCEHVEDSIPTQKSPERALELFNAAPEKNTQLYSAIIHVLVGSK 87
N+ SF+ + L + KC E++ ++ R+ + + Q +SA+IHVL G+
Sbjct: 34 NSASSFSSSSLAEAILKCRSAEEAFKLFETSSRS----RVSKSNDLQSFSAVIHVLTGAH 93
Query: 88 LFSHARCLLKGLVENLLRKSHKRYHVCQLAFNALSQLKSSKFTPNVYGELLIVLSKMGLV 147
++ ARCL+K L+E L R S ++ FNAL ++S KF+ V+ L++ +MGL
Sbjct: 94 KYTLARCLIKSLIERLKRHSEPS-NMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLF 153
Query: 148 EEALWMYRKVGAALAKQACNVLLDVLVKTGKFELLWRIFEEMISNGLSPDVITYGILIDG 207
EEALW+ R++ + +AC +L+ LV+ +F+ +W ++ MIS GL PDV Y +L
Sbjct: 154 EEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQC 213
Query: 208 CCRQGDLLRAHEMFDEMRAKGIEPTVVVYTILIRGLCSENKMEEAESMHRAMREVGVLPN 267
C +QG + ++ DEM + GI+P V +YTI I LC +NKMEEAE M M++ GVLPN
Sbjct: 214 CFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPN 273
Query: 268 VYTYNTLMDGYCKLANAKQALRLYQDMIGEGLVPDDVTFGILIDGLCKFGDIKAARNLSV 327
+YTY+ ++DGYCK N +QA LY++++ L+P+ V FG L+DG CK ++ AR+L V
Sbjct: 274 LYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFV 333
Query: 328 NIVKFSVTPSIAVYNSLIDGYCRAGDVSEAIAFLLELERFKVSPDVITYSILIRGLCSAG 387
++VKF V P++ VYN LI G+C++G++ EA+ L E+E +SPDV TY+ILI GLC
Sbjct: 334 HMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIED 393
Query: 388 RTEEADNIFEKMMKDGIPANSVTYNSLINGCCKEGNMKKALEICSRMTENGVEPNVITFS 447
+ EA+ +F+KM + I +S TYNSLI+G CKE NM++AL++CS MT +GVEPN+ITFS
Sbjct: 394 QVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFS 453
Query: 448 ILIDGYCKIRNLRAAMGIYSEMVIKSLSPDVVAYTAMIDGHCKYGSMKEALKLYSDMLDN 507
LIDGYC +R+++AAMG+Y EM IK + PDVV YTA+ID H K +MKEAL+LYSDML+
Sbjct: 454 TLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEA 513
Query: 508 GLTPNCYTISCLLDGLCKDGRISNALKLFTENTGFQTTRCDVNAGGSKPSFTNHVVYTAL 567
G+ PN +T +CL+DG K+GR+S A+ + EN + S NHV +T L
Sbjct: 514 GIHPNDHTFACLVDGFWKEGRLSVAIDFYQEN-------------NQQRSCWNHVGFTCL 573
Query: 568 IHGLCEDGQIFKAAKLFSDMRCYGLQPDEVIYVVMLQGYFQVKRILDVMMLHADIFFIGK 626
I GLC++G I +A++ FSDMR G+ PD YV ML+G+ Q KRI D MML D+ G
Sbjct: 574 IEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGI 616
BLAST of Lsi02G016960 vs. ExPASy Swiss-Prot
Match:
P0C894 (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana OX=3702 GN=At2g02150 PE=3 SV=1)
HSP 1 Score: 293.1 bits (749), Expect = 7.6e-78
Identity = 175/587 (29.81%), Postives = 301/587 (51.28%), Query Frame = 0
Query: 49 IPTQKSPERALELFNAAPEKN-----TQLYSAIIHVLVGSKLFSHARCLLKGLVENLLRK 108
+ ++ P+ A + F + +N + Y + H+L ++++ A +LK E +L K
Sbjct: 116 VELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLK---EMVLSK 175
Query: 109 SHKRYHVCQLAFNALSQLKSSKFTP-NVYGELLIVLSKMGLVEEALWMYRKVGAALA--- 168
+ C + F+ L ++ V+ L VL +G++EEA+ + K+
Sbjct: 176 AD-----CDV-FDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPK 235
Query: 169 KQACNVLLDVLVKTGKFELLWRIFEEMISNGLSPDVITYGILIDGCCRQGDLLRAHEMFD 228
++CN LL K GK + + R F++MI G P V TY I+ID C++GD+ A +F+
Sbjct: 236 TRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFE 295
Query: 229 EMRAKGIEPTVVVYTILIRGLCSENKMEEAESMHRAMREVGVLPNVYTYNTLMDGYCKLA 288
EM+ +G+ P V Y +I G ++++ M+++ P+V TYN L++ +CK
Sbjct: 296 EMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 355
Query: 289 NAKQALRLYQDMIGEGLVPDDVTFGILIDGLCKFGDIKAARNLSVNIVKFSVTPSIAVYN 348
L Y++M G GL P+ V++ L+D CK G ++ A V++ + + P+ Y
Sbjct: 356 KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 415
Query: 349 SLIDGYCRAGDVSEAIAFLLELERFKVSPDVITYSILIRGLCSAGRTEEADNIFEKMMKD 408
SLID C+ G++S+A E+ + V +V+TY+ LI GLC A R +EA+ +F KM
Sbjct: 416 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 475
Query: 409 GIPANSVTYNSLINGCCKEGNMKKALEICSRMTENGVEPNVITFSILIDGYCKIRNLRAA 468
G+ N +YN+LI+G K NM +ALE+ + + G++P+++ + I G C + + AA
Sbjct: 476 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 535
Query: 469 MGIYSEMVIKSLSPDVVAYTAMIDGHCKYGSMKEALKLYSDMLDNGLTPNCYTISCLLDG 528
+ +EM + + + YT ++D + K G+ E L L +M + + T L+DG
Sbjct: 536 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 595
Query: 529 LCKDGRISNALKLF---TENTGFQTTRCDVNAGGSKPSFTNHVVYTALIHGLCEDGQIFK 588
LCK+ +S A+ F + + G Q N ++TA+I GLC+D Q+
Sbjct: 596 LCKNKLVSKAVDYFNRISNDFGLQ---------------ANAAIFTAMIDGLCKDNQVEA 655
Query: 589 AAKLFSDMRCYGLQPDEVIYVVMLQGYFQVKRILDVMMLHADIFFIG 624
A LF M GL PD Y ++ G F+ +L+ + L + IG
Sbjct: 656 ATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 678
BLAST of Lsi02G016960 vs. ExPASy Swiss-Prot
Match:
Q9LFC5 (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX=3702 GN=At5g01110 PE=2 SV=1)
HSP 1 Score: 275.8 bits (704), Expect = 1.3e-72
Identity = 154/538 (28.62%), Postives = 277/538 (51.49%), Query Frame = 0
Query: 68 KNTQL-YSAIIHVLVGSKLFSHAR-CLLKGLVENLLRKSHKRYHVCQLAFNALSQLKSSK 127
K+T L SA+IH+LV S S A+ CLL+ + R R + + S S+
Sbjct: 110 KHTSLSLSAMIHILVRSGRLSDAQSCLLR----MIRRSGVSRLEIVNSLDSTFSNCGSND 169
Query: 128 FTPNVYGELLIVLSKMGLVEEALWMYRKVGAALAKQACNVLLDVLVKTGKFELLWRIFEE 187
++ + K+ EA + R G ++ ACN L+ LV+ G EL W +++E
Sbjct: 170 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 229
Query: 188 MISNGLSPDVITYGILIDGCCRQGDLLRAHEMFDEMRAKGIEPTVVVYTILIRGLCSENK 247
+ +G+ +V T I+++ C+ G + + +++ KG+ P +V Y LI S+
Sbjct: 230 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 289
Query: 248 MEEAESMHRAMREVGVLPNVYTYNTLMDGYCKLANAKQALRLYQDMIGEGLVPDDVTFGI 307
MEEA + AM G P VYTYNT+++G CK ++A ++ +M+ GL PD T+
Sbjct: 290 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 349
Query: 308 LIDGLCKFGDIKAARNLSVNIVKFSVTPSIAVYNSLIDGYCRAGDVSEAIAFLLELERFK 367
L+ CK GD+ + ++ V P + ++S++ + R+G++ +A+ + ++
Sbjct: 350 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 409
Query: 368 VSPDVITYSILIRGLCSAGRTEEADNIFEKMMKDGIPANSVTYNSLINGCCKEGNMKKAL 427
+ PD + Y+ILI+G C G A N+ +M++ G + VTYN++++G CK + +A
Sbjct: 410 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 469
Query: 428 EICSRMTENGVEPNVITFSILIDGYCKIRNLRAAMGIYSEMVIKSLSPDVVAYTAMIDGH 487
++ + MTE + P+ T +ILIDG+CK+ NL+ AM ++ +M K + DVV Y ++DG
Sbjct: 470 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 529
Query: 488 CKYGSMKEALKLYSDMLDNGLTPNCYTISCLLDGLCKDGRISNALKLFTENTGFQTTRCD 547
K G + A ++++DM+ + P + S L++ LC G ++ A +++ E
Sbjct: 530 GKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE---------- 589
Query: 548 VNAGGSKPSFTNHVVYTALIHGLCEDGQIFKAAKLFSDMRCYGLQPDEVIYVVMLQGY 604
+ + KP+ ++ ++I G C G M G PD + Y ++ G+
Sbjct: 590 MISKNIKPTV---MICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGF 630
BLAST of Lsi02G016960 vs. ExPASy Swiss-Prot
Match:
Q9LSL9 (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX=3702 GN=At5g65560 PE=2 SV=1)
HSP 1 Score: 275.8 bits (704), Expect = 1.3e-72
Identity = 159/487 (32.65%), Postives = 252/487 (51.75%), Query Frame = 0
Query: 131 YGELLIVLSKMGLVEEALWMYRKVGAALAKQAC------NVLLDVLVKTGKFELLWRIFE 190
Y LL L++ GLV+E +Y ++ L + C N +++ K G E +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEM---LEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 245
Query: 191 EMISNGLSPDVITYGILIDGCCRQGDLLRAHEMFDEMRAKGIEPTVVVYTILIRGLCSEN 250
+++ GL PD TY LI G C++ DL A ++F+EM KG V YT LI GLC
Sbjct: 246 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 305
Query: 251 KMEEAESMHRAMREVGVLPNVYTYNTLMDGYCKLANAKQALRLYQDMIGEGLVPDDVTFG 310
+++EA + M++ P V TY L+ C +AL L ++M G+ P+ T+
Sbjct: 306 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 365
Query: 311 ILIDGLCKFGDIKAARNLSVNIVKFSVTPSIAVYNSLIDGYCRAGDVSEAIAFLLELERF 370
+LID LC + AR L +++ + P++ YN+LI+GYC+ G + +A+ + +E
Sbjct: 366 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 425
Query: 371 KVSPDVITYSILIRGLCSAGRTEEADNIFEKMMKDGIPANSVTYNSLINGCCKEGNMKKA 430
K+SP+ TY+ LI+G C + +A + KM++ + + VTYNSLI+G C+ GN A
Sbjct: 426 KLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 485
Query: 431 LEICSRMTENGVEPNVITFSILIDGYCKIRNLRAAMGIYSEMVIKSLSPDVVAYTAMIDG 490
+ S M + G+ P+ T++ +ID CK + + A ++ + K ++P+VV YTA+IDG
Sbjct: 486 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 545
Query: 491 HCKYGSMKEALKLYSDMLDNGLTPNCYTISCLLDGLCKDGRISNALKLFTENTGFQTTRC 550
+CK G + EA + ML PN T + L+ GLC DG++ A L +
Sbjct: 546 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI----- 605
Query: 551 DVNAGGSKPSFTNHVVYTALIHGLCEDGQIFKAAKLFSDMRCYGLQPDEVIYVVMLQGYF 610
G +P+ + T LIH L +DG A F M G +PD Y +Q Y
Sbjct: 606 -----GLQPTVSTD---TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 655
Query: 611 QVKRILD 612
+ R+LD
Sbjct: 666 REGRLLD 655
BLAST of Lsi02G016960 vs. ExPASy Swiss-Prot
Match:
Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)
HSP 1 Score: 275.8 bits (704), Expect = 1.3e-72
Identity = 159/560 (28.39%), Postives = 276/560 (49.29%), Query Frame = 0
Query: 67 EKNTQLYSAIIHVLVGSKLFSHARCLLKGLVENLLRKSHKRYHVCQLAFNALSQLKSSKF 126
+ N + +IH+ V SK A+ L+ E K + Q + K
Sbjct: 116 DSNLESLCIVIHLAVASKDLKVAQSLISSFWER--PKLNVTDSFVQFFDLLVYTYKDWGS 175
Query: 127 TPNVYGELLIVLSKMGLVEEALWMYRKV---GAALAKQACNVLLDVL----VKTGKFELL 186
P V+ VL GL+ EA ++ K+ G L+ +CNV L L KT ++
Sbjct: 176 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 235
Query: 187 WRIFEEMISNGLSPDVITYGILIDGCCRQGDLLRAHEMFDEMRAKGIEPTVVVYTILIRG 246
+R F E+ G+ +V +Y I+I C+ G + AH + M KG P V+ Y+ ++ G
Sbjct: 236 FREFPEV---GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNG 295
Query: 247 LCSENKMEEAESMHRAMREVGVLPNVYTYNTLMDGYCKLANAKQALRLYQDMIGEGLVPD 306
C ++++ + M+ G+ PN Y Y +++ C++ +A + +MI +G++PD
Sbjct: 296 YCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 355
Query: 307 DVTFGILIDGLCKFGDIKAARNLSVNIVKFSVTPSIAVYNSLIDGYCRAGDVSEAIAFLL 366
V + LIDG CK GDI+AA + +TP + Y ++I G+C+ GD+ EA
Sbjct: 356 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 415
Query: 367 ELERFKVSPDVITYSILIRGLCSAGRTEEADNIFEKMMKDGIPANSVTYNSLINGCCKEG 426
E+ + PD +T++ LI G C AG ++A + M++ G N VTY +LI+G CKEG
Sbjct: 416 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 475
Query: 427 NMKKALEICSRMTENGVEPNVITFSILIDGYCKIRNLRAAMGIYSEMVIKSLSPDVVAYT 486
++ A E+ M + G++PN+ T++ +++G CK N+ A+ + E L+ D V YT
Sbjct: 476 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 535
Query: 487 AMIDGHCKYGSMKEALKLYSDMLDNGLTPNCYTISCLLDGLCKDGRISNALKLFTENTGF 546
++D +CK G M +A ++ +ML GL P T + L++G C G + + KL
Sbjct: 536 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL------- 595
Query: 547 QTTRCDVNAGGSKPSFTNHVVYTALIHGLCEDGQIFKAAKLFSDMRCYGLQPDEVIYVVM 606
+N +K N + +L+ C + A ++ DM G+ PD Y +
Sbjct: 596 ------LNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 655
Query: 607 LQGYFQVKRILDVMMLHADI 620
++G+ + + + + L ++
Sbjct: 656 VKGHCKARNMKEAWFLFQEM 657
BLAST of Lsi02G016960 vs. ExPASy TrEMBL
Match:
A0A6J1JTD6 (pentatricopeptide repeat-containing protein At5g61400 OS=Cucurbita maxima OX=3661 GN=LOC111487325 PE=4 SV=1)
HSP 1 Score: 996.5 bits (2575), Expect = 5.1e-287
Identity = 485/571 (84.94%), Postives = 532/571 (93.17%), Query Frame = 0
Query: 53 KSPERALELFNAAPEKNTQLYSAIIHVLVGSKLFSHARCLLKGLVENLLRKSHKRYHVCQ 112
KSP++ALELFNAAPEKNT+LYSAIIHVLVGSKLFSHARCLLK L+++LL KS + YHVCQ
Sbjct: 43 KSPKKALELFNAAPEKNTRLYSAIIHVLVGSKLFSHARCLLKDLIQDLLVKSRRPYHVCQ 102
Query: 113 LAFNALSQLKSSKFTPNVYGELLIVLSKMGLVEEALWMYRKVGAALAKQACNVLLDVLVK 172
LAFNALS LK+SKF+PNVY EL+IVLSKMGLV+EALWMYRKVG A+A+QACNVLLDVLVK
Sbjct: 103 LAFNALSSLKTSKFSPNVYSELIIVLSKMGLVDEALWMYRKVGVAVARQACNVLLDVLVK 162
Query: 173 TGKFELLWRIFEEMISNGLSPDVITYGILIDGCCRQGDLLRAHEMFDEMRAKGIEPTVVV 232
TG+FELLW I+EEM+SNGLSPDVITYGILIDG CRQGDLLRAHE+FDEMR KGIEPTVVV
Sbjct: 163 TGRFELLWGIYEEMVSNGLSPDVITYGILIDGRCRQGDLLRAHEIFDEMRVKGIEPTVVV 222
Query: 233 YTILIRGLCSENKMEEAESMHRAMREVGVLPNVYTYNTLMDGYCKLANAKQALRLYQDMI 292
YTI IRGLCS+NKMEEAE +HR MRE+GVLPNVYTYNTLM+G+CK+AN KQALRLY DM+
Sbjct: 223 YTIFIRGLCSDNKMEEAEGIHRLMRELGVLPNVYTYNTLMNGHCKVANVKQALRLYHDML 282
Query: 293 GEGLVPDDVTFGILIDGLCKFGDIKAARNLSVNIVKFSVTPSIAVYNSLIDGYCRAGDVS 352
GE LVPD+VTFGILIDGLCKFGDIKAARNL VN+VKFSVTPSIAVYNSLIDGYC+AGD+S
Sbjct: 283 GEDLVPDNVTFGILIDGLCKFGDIKAARNLLVNMVKFSVTPSIAVYNSLIDGYCKAGDIS 342
Query: 353 EAIAFLLELERFKVSPDVITYSILIRGLCSAGRTEEADNIFEKMMKDGIPANSVTYNSLI 412
EA+AFL ELERFKVSPDV+TYSILIRGLCSAGR EEADN+ EKMMK+GIPANSVTYNSLI
Sbjct: 343 EAMAFLSELERFKVSPDVVTYSILIRGLCSAGRIEEADNMLEKMMKEGIPANSVTYNSLI 402
Query: 413 NGCCKEGNMKKALEICSRMTENGVEPNVITFSILIDGYCKIRNLRAAMGIYSEMVIKSLS 472
+GCCKEGNM KALEICSRM ENGVEPNVITFS+LIDGYCKIRN+ AAMGIYSEM IKSLS
Sbjct: 403 DGCCKEGNMNKALEICSRMIENGVEPNVITFSMLIDGYCKIRNIEAAMGIYSEMGIKSLS 462
Query: 473 PDVVAYTAMIDGHCKYGSMKEALKLYSDMLDNGLTPNCYTISCLLDGLCKDGRISNALKL 532
PDVVAYTAMIDGHCK+G+MKEALKLY+DMLDNGLTPN YT+SCLLDGLCKDGR+ +AL+L
Sbjct: 463 PDVVAYTAMIDGHCKHGNMKEALKLYNDMLDNGLTPNSYTLSCLLDGLCKDGRVLDALEL 522
Query: 533 FTENTGFQTTRCDVNAGGSKPSFTNHVVYTALIHGLCEDGQIFKAAKLFSDMRCYGLQPD 592
FTE F TT+C V+A SK SFTNHVVYTALIHGLCEDGQIFKAAKLFSDMR YGLQPD
Sbjct: 523 FTEKAEFGTTKCKVDAAESKLSFTNHVVYTALIHGLCEDGQIFKAAKLFSDMRSYGLQPD 582
Query: 593 EVIYVVMLQGYFQVKRILDVMMLHADIFFIG 624
EVIYVVML+GYFQVKRILD+ MLHAD+ G
Sbjct: 583 EVIYVVMLKGYFQVKRILDMTMLHADMLKFG 613
BLAST of Lsi02G016960 vs. ExPASy TrEMBL
Match:
A0A6J1H5I4 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g61400 OS=Cucurbita moschata OX=3662 GN=LOC111460748 PE=4 SV=1)
HSP 1 Score: 987.6 bits (2552), Expect = 2.4e-284
Identity = 484/571 (84.76%), Postives = 528/571 (92.47%), Query Frame = 0
Query: 53 KSPERALELFNAAPEKNTQLYSAIIHVLVGSKLFSHARCLLKGLVENLLRKSHKRYHVCQ 112
KSP++ALELFNAAPEKNT+LYSAIIHVLVGSKLFSHARCLLK L+++LL KS + YHVCQ
Sbjct: 75 KSPQKALELFNAAPEKNTRLYSAIIHVLVGSKLFSHARCLLKELIQDLLVKSRRPYHVCQ 134
Query: 113 LAFNALSQLKSSKFTPNVYGELLIVLSKMGLVEEALWMYRKVGAALAKQACNVLLDVLVK 172
LAFN LS LK+SKF+PNVY EL+IVLSKMGLV+EALWMYRKVG A+A+QACNVLLDVLVK
Sbjct: 135 LAFNVLSSLKTSKFSPNVYSELIIVLSKMGLVDEALWMYRKVGVAVARQACNVLLDVLVK 194
Query: 173 TGKFELLWRIFEEMISNGLSPDVITYGILIDGCCRQGDLLRAHEMFDEMRAKGIEPTVVV 232
TG+FELLW I+EEM+SNGLSPDVITYGILIDG CRQGDLLRAHE+FDEMR KGIEPTVVV
Sbjct: 195 TGRFELLWGIYEEMVSNGLSPDVITYGILIDGRCRQGDLLRAHEIFDEMRVKGIEPTVVV 254
Query: 233 YTILIRGLCSENKMEEAESMHRAMREVGVLPNVYTYNTLMDGYCKLANAKQALRLYQDMI 292
YTILIRGLCSENKMEEAES+HR MRE+GVLPNVYTYNTLM+G+CK+AN KQALRLY DM+
Sbjct: 255 YTILIRGLCSENKMEEAESIHRLMRELGVLPNVYTYNTLMNGHCKVANVKQALRLYHDML 314
Query: 293 GEGLVPDDVTFGILIDGLCKFGDIKAARNLSVNIVKFSVTPSIAVYNSLIDGYCRAGDVS 352
GE LVPD+VTFGILIDGLCKFGDIKAARNL VN+VKFSVTPSIAVYNSLIDGYC+AGD+S
Sbjct: 315 GEDLVPDNVTFGILIDGLCKFGDIKAARNLLVNMVKFSVTPSIAVYNSLIDGYCKAGDIS 374
Query: 353 EAIAFLLELERFKVSPDVITYSILIRGLCSAGRTEEADNIFEKMMKDGIPANSVTYNSLI 412
EA+AFL ELERFKVSPDV+TYSILIRG CSAGR EEADN+ EKMMK+GIPANSVTYNSLI
Sbjct: 375 EAMAFLSELERFKVSPDVVTYSILIRGFCSAGRIEEADNMLEKMMKEGIPANSVTYNSLI 434
Query: 413 NGCCKEGNMKKALEICSRMTENGVEPNVITFSILIDGYCKIRNLRAAMGIYSEMVIKSLS 472
+GCCKEGNM KALEICSRM ENGVEPNVITFS+LIDGYCKIRN+ AAMGIYSEM IKSLS
Sbjct: 435 DGCCKEGNMNKALEICSRMIENGVEPNVITFSMLIDGYCKIRNIEAAMGIYSEMGIKSLS 494
Query: 473 PDVVAYTAMIDGHCKYGSMKEALKLYSDMLDNGLTPNCYTISCLLDGLCKDGRISNALKL 532
PDVVAYTAMIDGHCK+GSMKEALKLY+DML NGLTPN YT+SCLLDGLCKDGR+S+AL+L
Sbjct: 495 PDVVAYTAMIDGHCKHGSMKEALKLYNDMLQNGLTPNSYTLSCLLDGLCKDGRVSDALEL 554
Query: 533 FTENTGFQTTRCDVNAGGSKPSFTNHVVYTALIHGLCEDGQIFKAAKLFSDMRCYGLQPD 592
FTE F TT+C K SFTNHVVYTALIHGLCEDGQIFKAAKLFSDMR YGLQPD
Sbjct: 555 FTEKAEFGTTKC-------KLSFTNHVVYTALIHGLCEDGQIFKAAKLFSDMRSYGLQPD 614
Query: 593 EVIYVVMLQGYFQVKRILDVMMLHADIFFIG 624
EVIYVVML+GYFQVKRILD+ MLHAD+ G
Sbjct: 615 EVIYVVMLKGYFQVKRILDMTMLHADMLKFG 638
BLAST of Lsi02G016960 vs. ExPASy TrEMBL
Match:
A0A0A0KS30 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G496480 PE=4 SV=1)
HSP 1 Score: 959.1 bits (2478), Expect = 9.1e-276
Identity = 479/571 (83.89%), Postives = 514/571 (90.02%), Query Frame = 0
Query: 53 KSPERALELFNAAPEKNTQLYSAIIHVLVGSKLFSHARCLLKGLVENLLRKSHKRYHVCQ 112
+SP +ALE FNAAPEKN QLYSAIIHVLVGSKL SHAR LL LV+NL+ KSHK YH CQ
Sbjct: 54 RSPWKALEFFNAAPEKNIQLYSAIIHVLVGSKLLSHARYLLNDLVQNLV-KSHKPYHACQ 113
Query: 113 LAFNALSQLKSSKFTPNVYGELLIVLSKMGLVEEALWMYRKVGAALAKQACNVLLDVLVK 172
LAF+ LS+LKSSKFTPNVYGEL+IVL KM LVEEAL MY KVGAAL QACNVLL VLVK
Sbjct: 114 LAFSELSRLKSSKFTPNVYGELIIVLCKMELVEEALSMYHKVGAALTIQACNVLLYVLVK 173
Query: 173 TGKFELLWRIFEEMISNGLSPDVITYGILIDGCCRQGDLLRAHEMFDEMRAKGIEPTVVV 232
TG+FELLWRI+EEMISNGLSP VIT+G LIDGCCRQGDLLRA EMFDEMR KGI PTV+V
Sbjct: 174 TGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIV 233
Query: 233 YTILIRGLCSENKMEEAESMHRAMREVGVLPNVYTYNTLMDGYCKLANAKQALRLYQDMI 292
YTILIRGLCS+NK+EEAESMHRAMREVGV PNVYTYNTLMDGYCKLANAKQALRLYQDM+
Sbjct: 234 YTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDML 293
Query: 293 GEGLVPDDVTFGILIDGLCKFGDIKAARNLSVNIVKFSVTPSIAVYNSLIDGYCRAGDVS 352
GEGLVPD VTFGILIDGLCKFG++KAARNL VN++KFSVTP+IAVYNSLID YC+ GDVS
Sbjct: 294 GEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVS 353
Query: 353 EAIAFLLELERFKVSPDVITYSILIRGLCSAGRTEEADNIFEKMMKDGIPANSVTYNSLI 412
EA+A LELERF+VSPDV TYSILIRGLCS RTEEA NIFEKM K+GI ANSVTYNSLI
Sbjct: 354 EAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLI 413
Query: 413 NGCCKEGNMKKALEICSRMTENGVEPNVITFSILIDGYCKIRNLRAAMGIYSEMVIKSLS 472
+GCCKEG M KALEICS+MTENGVEPNVITFS LIDGYCKIRNL+AAMGIYSEMVIKSLS
Sbjct: 414 DGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLS 473
Query: 473 PDVVAYTAMIDGHCKYGSMKEALKLYSDMLDNGLTPNCYTISCLLDGLCKDGRISNALKL 532
PDVV YTAMIDGHCKYGSMKEALKLYSDMLDNG+TPNCYTISCLLDGLCKDG+IS+AL+L
Sbjct: 474 PDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALEL 533
Query: 533 FTENTGFQTTRCDVNAGGSKPSFTNHVVYTALIHGLCEDGQIFKAAKLFSDMRCYGLQPD 592
FTE FQT RC+V+AGGSKPS TNHV YTALIHGLC+DGQ KA KLFSDMR YGLQPD
Sbjct: 534 FTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPD 593
Query: 593 EVIYVVMLQGYFQVKRILDVMMLHADIFFIG 624
EVIYVVML+G FQVK IL MMLHAD+ G
Sbjct: 594 EVIYVVMLRGLFQVKYIL--MMLHADMLKFG 621
BLAST of Lsi02G016960 vs. ExPASy TrEMBL
Match:
A0A5D3C3E1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002130 PE=4 SV=1)
HSP 1 Score: 953.0 bits (2462), Expect = 6.5e-274
Identity = 475/571 (83.19%), Postives = 512/571 (89.67%), Query Frame = 0
Query: 53 KSPERALELFNAAPEKNTQLYSAIIHVLVGSKLFSHARCLLKGLVENLLRKSHKRYHVCQ 112
+SP +ALE FNAAPEK QLYSAIIHVLVGS+L SHAR LLK LV+NL+ KSHK YH CQ
Sbjct: 43 RSPRKALEFFNAAPEKTIQLYSAIIHVLVGSELLSHARYLLKDLVQNLV-KSHKPYHACQ 102
Query: 113 LAFNALSQLKSSKFTPNVYGELLIVLSKMGLVEEALWMYRKVGAALAKQACNVLLDVLVK 172
L F+ LS+LKSSKF+PNVYGEL+IVL KM LVEEAL MY KVGA L QACNVLL+VLVK
Sbjct: 103 LVFSELSRLKSSKFSPNVYGELIIVLCKMELVEEALSMYHKVGATLTIQACNVLLNVLVK 162
Query: 173 TGKFELLWRIFEEMISNGLSPDVITYGILIDGCCRQGDLLRAHEMFDEMRAKGIEPTVVV 232
TG+FELLWRI+EEMISNGLSP VIT+G LIDGCCRQGDLLRA EMFDEMR KGI PTVVV
Sbjct: 163 TGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVVV 222
Query: 233 YTILIRGLCSENKMEEAESMHRAMREVGVLPNVYTYNTLMDGYCKLANAKQALRLYQDMI 292
YTILIRGLCS++KMEEAESMHRAMREVGV PN+YTYNTLMDGYCKLANAKQALRLYQDM+
Sbjct: 223 YTILIRGLCSDSKMEEAESMHRAMREVGVYPNLYTYNTLMDGYCKLANAKQALRLYQDML 282
Query: 293 GEGLVPDDVTFGILIDGLCKFGDIKAARNLSVNIVKFSVTPSIAVYNSLIDGYCRAGDVS 352
GEGLVPD VTFGILIDGLCKFG++KAARNL VN++KF VTP+I VYNSLID YC+ GDVS
Sbjct: 283 GEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFCVTPNINVYNSLIDAYCKVGDVS 342
Query: 353 EAIAFLLELERFKVSPDVITYSILIRGLCSAGRTEEADNIFEKMMKDGIPANSVTYNSLI 412
EA+AF LELER+KVSPDV TYSILIRGLCS RTEEA NIFEKM K+GI ANSVTYNSLI
Sbjct: 343 EAMAFFLELERYKVSPDVFTYSILIRGLCSVTRTEEAGNIFEKMTKEGILANSVTYNSLI 402
Query: 413 NGCCKEGNMKKALEICSRMTENGVEPNVITFSILIDGYCKIRNLRAAMGIYSEMVIKSLS 472
+G CKEG M+KALEICS+MTENGVEPNVITFS LIDGYCKIRNL+AAMGIYSEMVIKSLS
Sbjct: 403 DGYCKEGKMEKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLS 462
Query: 473 PDVVAYTAMIDGHCKYGSMKEALKLYSDMLDNGLTPNCYTISCLLDGLCKDGRISNALKL 532
PDVV YTAMIDGHCKYGSMKEALKLYSDMLDNG+TPNCYTISCLLDGLCKDGRIS+AL+L
Sbjct: 463 PDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGRISDALRL 522
Query: 533 FTENTGFQTTRCDVNAGGSKPSFTNHVVYTALIHGLCEDGQIFKAAKLFSDMRCYGLQPD 592
FTE FQT RC+V+AGGSKPS TNHV YTALIHGLC+DGQ FKA KLFSDMR YGLQPD
Sbjct: 523 FTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFFKAVKLFSDMRRYGLQPD 582
Query: 593 EVIYVVMLQGYFQVKRILDVMMLHADIFFIG 624
EVIYVVMLQG QVK IL MMLHAD+ G
Sbjct: 583 EVIYVVMLQGLLQVKHIL--MMLHADMLKFG 610
BLAST of Lsi02G016960 vs. ExPASy TrEMBL
Match:
A0A1S4E4Z4 (pentatricopeptide repeat-containing protein At5g61400 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501683 PE=4 SV=1)
HSP 1 Score: 953.0 bits (2462), Expect = 6.5e-274
Identity = 475/571 (83.19%), Postives = 512/571 (89.67%), Query Frame = 0
Query: 53 KSPERALELFNAAPEKNTQLYSAIIHVLVGSKLFSHARCLLKGLVENLLRKSHKRYHVCQ 112
+SP +ALE FNAAPEK QLYSAIIHVLVGS+L SHAR LLK LV+NL+ KSHK YH CQ
Sbjct: 43 RSPRKALEFFNAAPEKTIQLYSAIIHVLVGSELLSHARYLLKDLVQNLV-KSHKPYHACQ 102
Query: 113 LAFNALSQLKSSKFTPNVYGELLIVLSKMGLVEEALWMYRKVGAALAKQACNVLLDVLVK 172
L F+ LS+LKSSKF+PNVYGEL+IVL KM LVEEAL MY KVGA L QACNVLL+VLVK
Sbjct: 103 LVFSELSRLKSSKFSPNVYGELIIVLCKMELVEEALSMYHKVGATLTIQACNVLLNVLVK 162
Query: 173 TGKFELLWRIFEEMISNGLSPDVITYGILIDGCCRQGDLLRAHEMFDEMRAKGIEPTVVV 232
TG+FELLWRI+EEMISNGLSP VIT+G LIDGCCRQGDLLRA EMFDEMR KGI PTVVV
Sbjct: 163 TGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVVV 222
Query: 233 YTILIRGLCSENKMEEAESMHRAMREVGVLPNVYTYNTLMDGYCKLANAKQALRLYQDMI 292
YTILIRGLCS++KMEEAESMHRAMREVGV PN+YTYNTLMDGYCKLANAKQALRLYQDM+
Sbjct: 223 YTILIRGLCSDSKMEEAESMHRAMREVGVYPNLYTYNTLMDGYCKLANAKQALRLYQDML 282
Query: 293 GEGLVPDDVTFGILIDGLCKFGDIKAARNLSVNIVKFSVTPSIAVYNSLIDGYCRAGDVS 352
GEGLVPD VTFGILIDGLCKFG++KAARNL VN++KF VTP+I VYNSLID YC+ GDVS
Sbjct: 283 GEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFCVTPNINVYNSLIDAYCKVGDVS 342
Query: 353 EAIAFLLELERFKVSPDVITYSILIRGLCSAGRTEEADNIFEKMMKDGIPANSVTYNSLI 412
EA+AF LELER+KVSPDV TYSILIRGLCS RTEEA NIFEKM K+GI ANSVTYNSLI
Sbjct: 343 EAMAFFLELERYKVSPDVFTYSILIRGLCSVTRTEEAGNIFEKMTKEGILANSVTYNSLI 402
Query: 413 NGCCKEGNMKKALEICSRMTENGVEPNVITFSILIDGYCKIRNLRAAMGIYSEMVIKSLS 472
+G CKEG M+KALEICS+MTENGVEPNVITFS LIDGYCKIRNL+AAMGIYSEMVIKSLS
Sbjct: 403 DGYCKEGKMEKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLS 462
Query: 473 PDVVAYTAMIDGHCKYGSMKEALKLYSDMLDNGLTPNCYTISCLLDGLCKDGRISNALKL 532
PDVV YTAMIDGHCKYGSMKEALKLYSDMLDNG+TPNCYTISCLLDGLCKDGRIS+AL+L
Sbjct: 463 PDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGRISDALRL 522
Query: 533 FTENTGFQTTRCDVNAGGSKPSFTNHVVYTALIHGLCEDGQIFKAAKLFSDMRCYGLQPD 592
FTE FQT RC+V+AGGSKPS TNHV YTALIHGLC+DGQ FKA KLFSDMR YGLQPD
Sbjct: 523 FTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFFKAVKLFSDMRRYGLQPD 582
Query: 593 EVIYVVMLQGYFQVKRILDVMMLHADIFFIG 624
EVIYVVMLQG QVK IL MMLHAD+ G
Sbjct: 583 EVIYVVMLQGLLQVKHIL--MMLHADMLKFG 610
BLAST of Lsi02G016960 vs. NCBI nr
Match:
XP_038890299.1 (pentatricopeptide repeat-containing protein At5g61400, partial [Benincasa hispida])
HSP 1 Score: 1036.6 bits (2679), Expect = 9.2e-299
Identity = 508/571 (88.97%), Postives = 544/571 (95.27%), Query Frame = 0
Query: 53 KSPERALELFNAAPEKNTQLYSAIIHVLVGSKLFSHARCLLKGLVENLLRKSHKRYHVCQ 112
+SP +ALE FNAAPEKNTQLYSAIIHVLVG+KLFS+AR LLK LVE+L+ KSHK Y+VCQ
Sbjct: 59 RSPRKALEFFNAAPEKNTQLYSAIIHVLVGAKLFSNARYLLKDLVEDLVAKSHKPYYVCQ 118
Query: 113 LAFNALSQLKSSKFTPNVYGELLIVLSKMGLVEEALWMYRKVGAALAKQACNVLLDVLVK 172
LAFNALS+LKSSKFTPNVYGEL+IVLSKM LVEEALWMYRKVG L KQACNVLLDVLVK
Sbjct: 119 LAFNALSRLKSSKFTPNVYGELIIVLSKMRLVEEALWMYRKVGTTLTKQACNVLLDVLVK 178
Query: 173 TGKFELLWRIFEEMISNGLSPDVITYGILIDGCCRQGDLLRAHEMFDEMRAKGIEPTVVV 232
TG+FELLWRI+EEMISNGLS DVITYGILIDGCCRQGDLLRAHEMFDEMR KGIEPTVVV
Sbjct: 179 TGRFELLWRIYEEMISNGLSHDVITYGILIDGCCRQGDLLRAHEMFDEMRVKGIEPTVVV 238
Query: 233 YTILIRGLCSENKMEEAESMHRAMREVGVLPNVYTYNTLMDGYCKLANAKQALRLYQDMI 292
YTILIRGLCSENKMEEAES+HR MREVGVLPNVY+YNTLMDGYCKLANAKQALRLYQDM+
Sbjct: 239 YTILIRGLCSENKMEEAESLHRVMREVGVLPNVYSYNTLMDGYCKLANAKQALRLYQDML 298
Query: 293 GEGLVPDDVTFGILIDGLCKFGDIKAARNLSVNIVKFSVTPSIAVYNSLIDGYCRAGDVS 352
GEGLVPDDVTFGILIDGLCKFGD KAARNLSVN+VKFSVTPSIAVYNSLIDGYC+AGDVS
Sbjct: 299 GEGLVPDDVTFGILIDGLCKFGDSKAARNLSVNMVKFSVTPSIAVYNSLIDGYCKAGDVS 358
Query: 353 EAIAFLLELERFKVSPDVITYSILIRGLCSAGRTEEADNIFEKMMKDGIPANSVTYNSLI 412
EA+AF LEL RFKVSPDVITYSILIRGLCSAGR EEADNIFEKM KDGIPANSVTYNSLI
Sbjct: 359 EAMAFFLELGRFKVSPDVITYSILIRGLCSAGRIEEADNIFEKMTKDGIPANSVTYNSLI 418
Query: 413 NGCCKEGNMKKALEICSRMTENGVEPNVITFSILIDGYCKIRNLRAAMGIYSEMVIKSLS 472
+G CKEGN+KKALEICSRMTENGVEPNVITFS+LIDGYCKIR+LRAAMGIYSEMVIKSLS
Sbjct: 419 DGYCKEGNIKKALEICSRMTENGVEPNVITFSMLIDGYCKIRDLRAAMGIYSEMVIKSLS 478
Query: 473 PDVVAYTAMIDGHCKYGSMKEALKLYSDMLDNGLTPNCYTISCLLDGLCKDGRISNALKL 532
PDVV YT MIDGHCKYGS+KEALKLY+DML+NGLTPNC+TISCLLDGLCKDGRIS+AL+L
Sbjct: 479 PDVVVYTTMIDGHCKYGSIKEALKLYNDMLENGLTPNCFTISCLLDGLCKDGRISDALEL 538
Query: 533 FTENTGFQTTRCDVNAGGSKPSFTNHVVYTALIHGLCEDGQIFKAAKLFSDMRCYGLQPD 592
FT+ GF TTRCDV+AGG++PSFTN+VVYTALIHGLCEDGQIFKAAKLFSDMRCYGLQPD
Sbjct: 539 FTKKIGFGTTRCDVDAGGTEPSFTNNVVYTALIHGLCEDGQIFKAAKLFSDMRCYGLQPD 598
Query: 593 EVIYVVMLQGYFQVKRILDVMMLHADIFFIG 624
EVIYVVMLQGYFQVKR+L++MMLHAD+ G
Sbjct: 599 EVIYVVMLQGYFQVKRVLNMMMLHADMLKFG 629
BLAST of Lsi02G016960 vs. NCBI nr
Match:
XP_022990473.1 (pentatricopeptide repeat-containing protein At5g61400 [Cucurbita maxima])
HSP 1 Score: 996.5 bits (2575), Expect = 1.1e-286
Identity = 485/571 (84.94%), Postives = 532/571 (93.17%), Query Frame = 0
Query: 53 KSPERALELFNAAPEKNTQLYSAIIHVLVGSKLFSHARCLLKGLVENLLRKSHKRYHVCQ 112
KSP++ALELFNAAPEKNT+LYSAIIHVLVGSKLFSHARCLLK L+++LL KS + YHVCQ
Sbjct: 43 KSPKKALELFNAAPEKNTRLYSAIIHVLVGSKLFSHARCLLKDLIQDLLVKSRRPYHVCQ 102
Query: 113 LAFNALSQLKSSKFTPNVYGELLIVLSKMGLVEEALWMYRKVGAALAKQACNVLLDVLVK 172
LAFNALS LK+SKF+PNVY EL+IVLSKMGLV+EALWMYRKVG A+A+QACNVLLDVLVK
Sbjct: 103 LAFNALSSLKTSKFSPNVYSELIIVLSKMGLVDEALWMYRKVGVAVARQACNVLLDVLVK 162
Query: 173 TGKFELLWRIFEEMISNGLSPDVITYGILIDGCCRQGDLLRAHEMFDEMRAKGIEPTVVV 232
TG+FELLW I+EEM+SNGLSPDVITYGILIDG CRQGDLLRAHE+FDEMR KGIEPTVVV
Sbjct: 163 TGRFELLWGIYEEMVSNGLSPDVITYGILIDGRCRQGDLLRAHEIFDEMRVKGIEPTVVV 222
Query: 233 YTILIRGLCSENKMEEAESMHRAMREVGVLPNVYTYNTLMDGYCKLANAKQALRLYQDMI 292
YTI IRGLCS+NKMEEAE +HR MRE+GVLPNVYTYNTLM+G+CK+AN KQALRLY DM+
Sbjct: 223 YTIFIRGLCSDNKMEEAEGIHRLMRELGVLPNVYTYNTLMNGHCKVANVKQALRLYHDML 282
Query: 293 GEGLVPDDVTFGILIDGLCKFGDIKAARNLSVNIVKFSVTPSIAVYNSLIDGYCRAGDVS 352
GE LVPD+VTFGILIDGLCKFGDIKAARNL VN+VKFSVTPSIAVYNSLIDGYC+AGD+S
Sbjct: 283 GEDLVPDNVTFGILIDGLCKFGDIKAARNLLVNMVKFSVTPSIAVYNSLIDGYCKAGDIS 342
Query: 353 EAIAFLLELERFKVSPDVITYSILIRGLCSAGRTEEADNIFEKMMKDGIPANSVTYNSLI 412
EA+AFL ELERFKVSPDV+TYSILIRGLCSAGR EEADN+ EKMMK+GIPANSVTYNSLI
Sbjct: 343 EAMAFLSELERFKVSPDVVTYSILIRGLCSAGRIEEADNMLEKMMKEGIPANSVTYNSLI 402
Query: 413 NGCCKEGNMKKALEICSRMTENGVEPNVITFSILIDGYCKIRNLRAAMGIYSEMVIKSLS 472
+GCCKEGNM KALEICSRM ENGVEPNVITFS+LIDGYCKIRN+ AAMGIYSEM IKSLS
Sbjct: 403 DGCCKEGNMNKALEICSRMIENGVEPNVITFSMLIDGYCKIRNIEAAMGIYSEMGIKSLS 462
Query: 473 PDVVAYTAMIDGHCKYGSMKEALKLYSDMLDNGLTPNCYTISCLLDGLCKDGRISNALKL 532
PDVVAYTAMIDGHCK+G+MKEALKLY+DMLDNGLTPN YT+SCLLDGLCKDGR+ +AL+L
Sbjct: 463 PDVVAYTAMIDGHCKHGNMKEALKLYNDMLDNGLTPNSYTLSCLLDGLCKDGRVLDALEL 522
Query: 533 FTENTGFQTTRCDVNAGGSKPSFTNHVVYTALIHGLCEDGQIFKAAKLFSDMRCYGLQPD 592
FTE F TT+C V+A SK SFTNHVVYTALIHGLCEDGQIFKAAKLFSDMR YGLQPD
Sbjct: 523 FTEKAEFGTTKCKVDAAESKLSFTNHVVYTALIHGLCEDGQIFKAAKLFSDMRSYGLQPD 582
Query: 593 EVIYVVMLQGYFQVKRILDVMMLHADIFFIG 624
EVIYVVML+GYFQVKRILD+ MLHAD+ G
Sbjct: 583 EVIYVVMLKGYFQVKRILDMTMLHADMLKFG 613
BLAST of Lsi02G016960 vs. NCBI nr
Match:
XP_023517041.1 (pentatricopeptide repeat-containing protein At5g61400 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 992.6 bits (2565), Expect = 1.5e-285
Identity = 487/571 (85.29%), Postives = 532/571 (93.17%), Query Frame = 0
Query: 53 KSPERALELFNAAPEKNTQLYSAIIHVLVGSKLFSHARCLLKGLVENLLRKSHKRYHVCQ 112
KSP++ALELFNAAPEKNT+LYSAIIHVLVGSKLFSHARCLLK L+++LL KS + YHVCQ
Sbjct: 43 KSPKKALELFNAAPEKNTRLYSAIIHVLVGSKLFSHARCLLKELIQDLLVKSRRPYHVCQ 102
Query: 113 LAFNALSQLKSSKFTPNVYGELLIVLSKMGLVEEALWMYRKVGAALAKQACNVLLDVLVK 172
LAFNALS LK+SKF+PNVY EL+IVLSKMGLV+EALWMYRKVG A+A+QACNVLLDVLVK
Sbjct: 103 LAFNALSSLKTSKFSPNVYSELIIVLSKMGLVDEALWMYRKVGVAVARQACNVLLDVLVK 162
Query: 173 TGKFELLWRIFEEMISNGLSPDVITYGILIDGCCRQGDLLRAHEMFDEMRAKGIEPTVVV 232
TG+FELLW I+EEM+SNGLSPDVITYGILIDG CRQGDLLRAHE+FDEMR KGIEPTVVV
Sbjct: 163 TGRFELLWGIYEEMVSNGLSPDVITYGILIDGRCRQGDLLRAHEIFDEMRVKGIEPTVVV 222
Query: 233 YTILIRGLCSENKMEEAESMHRAMREVGVLPNVYTYNTLMDGYCKLANAKQALRLYQDMI 292
YTILIRGLCSENKMEEAES+HR MRE+GVLPNVYTYNTLM+G+CK+AN KQALRLY +M+
Sbjct: 223 YTILIRGLCSENKMEEAESIHRLMRELGVLPNVYTYNTLMNGHCKVANVKQALRLYHNML 282
Query: 293 GEGLVPDDVTFGILIDGLCKFGDIKAARNLSVNIVKFSVTPSIAVYNSLIDGYCRAGDVS 352
GE LVPD+VTFGILIDGLCKFGDIKAARNLSVN+VKFSVTPSIAVYNSLIDGYC+AGD+S
Sbjct: 283 GEDLVPDNVTFGILIDGLCKFGDIKAARNLSVNMVKFSVTPSIAVYNSLIDGYCKAGDIS 342
Query: 353 EAIAFLLELERFKVSPDVITYSILIRGLCSAGRTEEADNIFEKMMKDGIPANSVTYNSLI 412
EA+AFL ELERFKVSPDV+TYSILIRGLCSAGR EEADN+ EKMMK+GIPANSVTYNSLI
Sbjct: 343 EAMAFLSELERFKVSPDVVTYSILIRGLCSAGRIEEADNMLEKMMKEGIPANSVTYNSLI 402
Query: 413 NGCCKEGNMKKALEICSRMTENGVEPNVITFSILIDGYCKIRNLRAAMGIYSEMVIKSLS 472
+GCCKEGNM KALEICSRM ENGVEPNVITFS+LIDGYCKIRN+ AAMGIYSEM IKSLS
Sbjct: 403 DGCCKEGNMNKALEICSRMIENGVEPNVITFSMLIDGYCKIRNVEAAMGIYSEMGIKSLS 462
Query: 473 PDVVAYTAMIDGHCKYGSMKEALKLYSDMLDNGLTPNCYTISCLLDGLCKDGRISNALKL 532
PDVVAYTAMIDGHCK+GSMKEALKLY+DMLDNGLTPN YT+SCLLDGLCKDGR+S+AL+L
Sbjct: 463 PDVVAYTAMIDGHCKHGSMKEALKLYNDMLDNGLTPNSYTLSCLLDGLCKDGRVSDALEL 522
Query: 533 FTENTGFQTTRCDVNAGGSKPSFTNHVVYTALIHGLCEDGQIFKAAKLFSDMRCYGLQPD 592
FTE F TT+C K SFTNHVVYTALIHGLCEDGQIFKAAKLFSDMR YGLQPD
Sbjct: 523 FTEKAEFGTTKC-------KLSFTNHVVYTALIHGLCEDGQIFKAAKLFSDMRSYGLQPD 582
Query: 593 EVIYVVMLQGYFQVKRILDVMMLHADIFFIG 624
EVIYVVML+GYFQVKRILD+ MLHAD+ G
Sbjct: 583 EVIYVVMLKGYFQVKRILDMTMLHADMLKFG 606
BLAST of Lsi02G016960 vs. NCBI nr
Match:
KAG7033017.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 988.8 bits (2555), Expect = 2.2e-284
Identity = 485/571 (84.94%), Postives = 529/571 (92.64%), Query Frame = 0
Query: 53 KSPERALELFNAAPEKNTQLYSAIIHVLVGSKLFSHARCLLKGLVENLLRKSHKRYHVCQ 112
KSP++ALELFNAAPEKNT+LYSAIIHVLVGSKLFSHARCLLK L+++LL KS + YHVCQ
Sbjct: 43 KSPKKALELFNAAPEKNTRLYSAIIHVLVGSKLFSHARCLLKELIQDLLVKSRRPYHVCQ 102
Query: 113 LAFNALSQLKSSKFTPNVYGELLIVLSKMGLVEEALWMYRKVGAALAKQACNVLLDVLVK 172
LAFN LS LK+SKF+PNVY EL+IVLSKMGLV+EALWMYRKVG A+A+QACNVLLDVLVK
Sbjct: 103 LAFNVLSSLKTSKFSPNVYSELIIVLSKMGLVDEALWMYRKVGVAVARQACNVLLDVLVK 162
Query: 173 TGKFELLWRIFEEMISNGLSPDVITYGILIDGCCRQGDLLRAHEMFDEMRAKGIEPTVVV 232
TG+FELLW I+EEM+SNGLSPDVITYGILIDG CRQGDLLRAHE+FDEMR KGIEPTVVV
Sbjct: 163 TGRFELLWGIYEEMVSNGLSPDVITYGILIDGRCRQGDLLRAHEIFDEMRVKGIEPTVVV 222
Query: 233 YTILIRGLCSENKMEEAESMHRAMREVGVLPNVYTYNTLMDGYCKLANAKQALRLYQDMI 292
YTILIRGLCSENKMEEAES+HR MRE+GVLPNVYTYNTLM+G+CK+AN KQALRLY DM+
Sbjct: 223 YTILIRGLCSENKMEEAESIHRLMRELGVLPNVYTYNTLMNGHCKVANVKQALRLYHDML 282
Query: 293 GEGLVPDDVTFGILIDGLCKFGDIKAARNLSVNIVKFSVTPSIAVYNSLIDGYCRAGDVS 352
GE LVPD+VTFGILIDGLCKFGDIKAARNL VN+VKFSVTPSIAVYNSLIDGYC+AGD+S
Sbjct: 283 GEDLVPDNVTFGILIDGLCKFGDIKAARNLLVNMVKFSVTPSIAVYNSLIDGYCKAGDIS 342
Query: 353 EAIAFLLELERFKVSPDVITYSILIRGLCSAGRTEEADNIFEKMMKDGIPANSVTYNSLI 412
EA+AFL ELERFKVSPDV+TYSILIRGLCSAGR EEADN+ EKMMK+GIPANSVTYNSLI
Sbjct: 343 EAMAFLSELERFKVSPDVVTYSILIRGLCSAGRIEEADNMLEKMMKEGIPANSVTYNSLI 402
Query: 413 NGCCKEGNMKKALEICSRMTENGVEPNVITFSILIDGYCKIRNLRAAMGIYSEMVIKSLS 472
+GCCKEGNM KALEICSRM ENGVEPNVITFS+LIDGYCKIRN+ AAMGIYSEM IKSLS
Sbjct: 403 DGCCKEGNMNKALEICSRMIENGVEPNVITFSMLIDGYCKIRNIEAAMGIYSEMGIKSLS 462
Query: 473 PDVVAYTAMIDGHCKYGSMKEALKLYSDMLDNGLTPNCYTISCLLDGLCKDGRISNALKL 532
PDVVAYTAMIDGHCK+GSMKEALKLY+DML NGLTPN YT+SCLLDGLCKDGR+S+AL+L
Sbjct: 463 PDVVAYTAMIDGHCKHGSMKEALKLYNDMLQNGLTPNSYTLSCLLDGLCKDGRVSDALEL 522
Query: 533 FTENTGFQTTRCDVNAGGSKPSFTNHVVYTALIHGLCEDGQIFKAAKLFSDMRCYGLQPD 592
FTE F TT+C K SFTNHVVYTALIHGLCEDGQIFKAAKLFSDMR YGLQPD
Sbjct: 523 FTEKAEFGTTKC-------KLSFTNHVVYTALIHGLCEDGQIFKAAKLFSDMRSYGLQPD 582
Query: 593 EVIYVVMLQGYFQVKRILDVMMLHADIFFIG 624
EVIYVVML+GYFQVKRILD+ MLHAD+ G
Sbjct: 583 EVIYVVMLKGYFQVKRILDMTMLHADMLKFG 606
BLAST of Lsi02G016960 vs. NCBI nr
Match:
XP_022959787.1 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g61400 [Cucurbita moschata])
HSP 1 Score: 987.6 bits (2552), Expect = 4.9e-284
Identity = 484/571 (84.76%), Postives = 528/571 (92.47%), Query Frame = 0
Query: 53 KSPERALELFNAAPEKNTQLYSAIIHVLVGSKLFSHARCLLKGLVENLLRKSHKRYHVCQ 112
KSP++ALELFNAAPEKNT+LYSAIIHVLVGSKLFSHARCLLK L+++LL KS + YHVCQ
Sbjct: 75 KSPQKALELFNAAPEKNTRLYSAIIHVLVGSKLFSHARCLLKELIQDLLVKSRRPYHVCQ 134
Query: 113 LAFNALSQLKSSKFTPNVYGELLIVLSKMGLVEEALWMYRKVGAALAKQACNVLLDVLVK 172
LAFN LS LK+SKF+PNVY EL+IVLSKMGLV+EALWMYRKVG A+A+QACNVLLDVLVK
Sbjct: 135 LAFNVLSSLKTSKFSPNVYSELIIVLSKMGLVDEALWMYRKVGVAVARQACNVLLDVLVK 194
Query: 173 TGKFELLWRIFEEMISNGLSPDVITYGILIDGCCRQGDLLRAHEMFDEMRAKGIEPTVVV 232
TG+FELLW I+EEM+SNGLSPDVITYGILIDG CRQGDLLRAHE+FDEMR KGIEPTVVV
Sbjct: 195 TGRFELLWGIYEEMVSNGLSPDVITYGILIDGRCRQGDLLRAHEIFDEMRVKGIEPTVVV 254
Query: 233 YTILIRGLCSENKMEEAESMHRAMREVGVLPNVYTYNTLMDGYCKLANAKQALRLYQDMI 292
YTILIRGLCSENKMEEAES+HR MRE+GVLPNVYTYNTLM+G+CK+AN KQALRLY DM+
Sbjct: 255 YTILIRGLCSENKMEEAESIHRLMRELGVLPNVYTYNTLMNGHCKVANVKQALRLYHDML 314
Query: 293 GEGLVPDDVTFGILIDGLCKFGDIKAARNLSVNIVKFSVTPSIAVYNSLIDGYCRAGDVS 352
GE LVPD+VTFGILIDGLCKFGDIKAARNL VN+VKFSVTPSIAVYNSLIDGYC+AGD+S
Sbjct: 315 GEDLVPDNVTFGILIDGLCKFGDIKAARNLLVNMVKFSVTPSIAVYNSLIDGYCKAGDIS 374
Query: 353 EAIAFLLELERFKVSPDVITYSILIRGLCSAGRTEEADNIFEKMMKDGIPANSVTYNSLI 412
EA+AFL ELERFKVSPDV+TYSILIRG CSAGR EEADN+ EKMMK+GIPANSVTYNSLI
Sbjct: 375 EAMAFLSELERFKVSPDVVTYSILIRGFCSAGRIEEADNMLEKMMKEGIPANSVTYNSLI 434
Query: 413 NGCCKEGNMKKALEICSRMTENGVEPNVITFSILIDGYCKIRNLRAAMGIYSEMVIKSLS 472
+GCCKEGNM KALEICSRM ENGVEPNVITFS+LIDGYCKIRN+ AAMGIYSEM IKSLS
Sbjct: 435 DGCCKEGNMNKALEICSRMIENGVEPNVITFSMLIDGYCKIRNIEAAMGIYSEMGIKSLS 494
Query: 473 PDVVAYTAMIDGHCKYGSMKEALKLYSDMLDNGLTPNCYTISCLLDGLCKDGRISNALKL 532
PDVVAYTAMIDGHCK+GSMKEALKLY+DML NGLTPN YT+SCLLDGLCKDGR+S+AL+L
Sbjct: 495 PDVVAYTAMIDGHCKHGSMKEALKLYNDMLQNGLTPNSYTLSCLLDGLCKDGRVSDALEL 554
Query: 533 FTENTGFQTTRCDVNAGGSKPSFTNHVVYTALIHGLCEDGQIFKAAKLFSDMRCYGLQPD 592
FTE F TT+C K SFTNHVVYTALIHGLCEDGQIFKAAKLFSDMR YGLQPD
Sbjct: 555 FTEKAEFGTTKC-------KLSFTNHVVYTALIHGLCEDGQIFKAAKLFSDMRSYGLQPD 614
Query: 593 EVIYVVMLQGYFQVKRILDVMMLHADIFFIG 624
EVIYVVML+GYFQVKRILD+ MLHAD+ G
Sbjct: 615 EVIYVVMLKGYFQVKRILDMTMLHADMLKFG 638
BLAST of Lsi02G016960 vs. TAIR 10
Match:
AT5G61400.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 536.6 bits (1381), Expect = 2.8e-152
Identity = 272/601 (45.26%), Postives = 393/601 (65.39%), Query Frame = 0
Query: 28 NAKLSFAMNGLQK---KCEHVEDSIPTQKSPERALELFNAAPEKNTQLYSAIIHVLVGSK 87
N+ SF+ + L + KC E++ ++ R+ + + Q +SA+IHVL G+
Sbjct: 34 NSASSFSSSSLAEAILKCRSAEEAFKLFETSSRS----RVSKSNDLQSFSAVIHVLTGAH 93
Query: 88 LFSHARCLLKGLVENLLRKSHKRYHVCQLAFNALSQLKSSKFTPNVYGELLIVLSKMGLV 147
++ ARCL+K L+E L R S ++ FNAL ++S KF+ V+ L++ +MGL
Sbjct: 94 KYTLARCLIKSLIERLKRHSEPS-NMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLF 153
Query: 148 EEALWMYRKVGAALAKQACNVLLDVLVKTGKFELLWRIFEEMISNGLSPDVITYGILIDG 207
EEALW+ R++ + +AC +L+ LV+ +F+ +W ++ MIS GL PDV Y +L
Sbjct: 154 EEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQC 213
Query: 208 CCRQGDLLRAHEMFDEMRAKGIEPTVVVYTILIRGLCSENKMEEAESMHRAMREVGVLPN 267
C +QG + ++ DEM + GI+P V +YTI I LC +NKMEEAE M M++ GVLPN
Sbjct: 214 CFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPN 273
Query: 268 VYTYNTLMDGYCKLANAKQALRLYQDMIGEGLVPDDVTFGILIDGLCKFGDIKAARNLSV 327
+YTY+ ++DGYCK N +QA LY++++ L+P+ V FG L+DG CK ++ AR+L V
Sbjct: 274 LYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFV 333
Query: 328 NIVKFSVTPSIAVYNSLIDGYCRAGDVSEAIAFLLELERFKVSPDVITYSILIRGLCSAG 387
++VKF V P++ VYN LI G+C++G++ EA+ L E+E +SPDV TY+ILI GLC
Sbjct: 334 HMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIED 393
Query: 388 RTEEADNIFEKMMKDGIPANSVTYNSLINGCCKEGNMKKALEICSRMTENGVEPNVITFS 447
+ EA+ +F+KM + I +S TYNSLI+G CKE NM++AL++CS MT +GVEPN+ITFS
Sbjct: 394 QVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFS 453
Query: 448 ILIDGYCKIRNLRAAMGIYSEMVIKSLSPDVVAYTAMIDGHCKYGSMKEALKLYSDMLDN 507
LIDGYC +R+++AAMG+Y EM IK + PDVV YTA+ID H K +MKEAL+LYSDML+
Sbjct: 454 TLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEA 513
Query: 508 GLTPNCYTISCLLDGLCKDGRISNALKLFTENTGFQTTRCDVNAGGSKPSFTNHVVYTAL 567
G+ PN +T +CL+DG K+GR+S A+ + EN + S NHV +T L
Sbjct: 514 GIHPNDHTFACLVDGFWKEGRLSVAIDFYQEN-------------NQQRSCWNHVGFTCL 573
Query: 568 IHGLCEDGQIFKAAKLFSDMRCYGLQPDEVIYVVMLQGYFQVKRILDVMMLHADIFFIGK 626
I GLC++G I +A++ FSDMR G+ PD YV ML+G+ Q KRI D MML D+ G
Sbjct: 574 IEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGI 616
BLAST of Lsi02G016960 vs. TAIR 10
Match:
AT2G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 293.1 bits (749), Expect = 5.4e-79
Identity = 175/587 (29.81%), Postives = 301/587 (51.28%), Query Frame = 0
Query: 49 IPTQKSPERALELFNAAPEKN-----TQLYSAIIHVLVGSKLFSHARCLLKGLVENLLRK 108
+ ++ P+ A + F + +N + Y + H+L ++++ A +LK E +L K
Sbjct: 116 VELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLK---EMVLSK 175
Query: 109 SHKRYHVCQLAFNALSQLKSSKFTP-NVYGELLIVLSKMGLVEEALWMYRKVGAALA--- 168
+ C + F+ L ++ V+ L VL +G++EEA+ + K+
Sbjct: 176 AD-----CDV-FDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPK 235
Query: 169 KQACNVLLDVLVKTGKFELLWRIFEEMISNGLSPDVITYGILIDGCCRQGDLLRAHEMFD 228
++CN LL K GK + + R F++MI G P V TY I+ID C++GD+ A +F+
Sbjct: 236 TRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFE 295
Query: 229 EMRAKGIEPTVVVYTILIRGLCSENKMEEAESMHRAMREVGVLPNVYTYNTLMDGYCKLA 288
EM+ +G+ P V Y +I G ++++ M+++ P+V TYN L++ +CK
Sbjct: 296 EMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 355
Query: 289 NAKQALRLYQDMIGEGLVPDDVTFGILIDGLCKFGDIKAARNLSVNIVKFSVTPSIAVYN 348
L Y++M G GL P+ V++ L+D CK G ++ A V++ + + P+ Y
Sbjct: 356 KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 415
Query: 349 SLIDGYCRAGDVSEAIAFLLELERFKVSPDVITYSILIRGLCSAGRTEEADNIFEKMMKD 408
SLID C+ G++S+A E+ + V +V+TY+ LI GLC A R +EA+ +F KM
Sbjct: 416 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 475
Query: 409 GIPANSVTYNSLINGCCKEGNMKKALEICSRMTENGVEPNVITFSILIDGYCKIRNLRAA 468
G+ N +YN+LI+G K NM +ALE+ + + G++P+++ + I G C + + AA
Sbjct: 476 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 535
Query: 469 MGIYSEMVIKSLSPDVVAYTAMIDGHCKYGSMKEALKLYSDMLDNGLTPNCYTISCLLDG 528
+ +EM + + + YT ++D + K G+ E L L +M + + T L+DG
Sbjct: 536 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 595
Query: 529 LCKDGRISNALKLF---TENTGFQTTRCDVNAGGSKPSFTNHVVYTALIHGLCEDGQIFK 588
LCK+ +S A+ F + + G Q N ++TA+I GLC+D Q+
Sbjct: 596 LCKNKLVSKAVDYFNRISNDFGLQ---------------ANAAIFTAMIDGLCKDNQVEA 655
Query: 589 AAKLFSDMRCYGLQPDEVIYVVMLQGYFQVKRILDVMMLHADIFFIG 624
A LF M GL PD Y ++ G F+ +L+ + L + IG
Sbjct: 656 ATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 678
BLAST of Lsi02G016960 vs. TAIR 10
Match:
AT1G12700.1 (ATP binding;nucleic acid binding;helicases )
HSP 1 Score: 276.2 bits (705), Expect = 6.8e-74
Identity = 146/475 (30.74%), Postives = 241/475 (50.74%), Query Frame = 0
Query: 118 LSQLKSSKFTPNVYGELLIVLSKMGLVEEALWMYRKVGAALAKQACNVLLDVLVKTGKFE 177
L+ + + +T N+ K L K+G N L+ L GK
Sbjct: 116 LNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVS 175
Query: 178 LLWRIFEEMISNGLSPDVITYGILIDGCCRQGDLLRAHEMFDEMRAKGIEPTVVVYTILI 237
+ + M+ NG PDV+TY +++G CR GD A ++ +M + ++ V Y+ +I
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTII 235
Query: 238 RGLCSENKMEEAESMHRAMREVGVLPNVYTYNTLMDGYCKLANAKQALRLYQDMIGEGLV 297
LC + ++ A S+ + M G+ +V TYN+L+ G CK L +DM+ +V
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295
Query: 298 PDDVTFGILIDGLCKFGDIKAARNLSVNIVKFSVTPSIAVYNSLIDGYCRAGDVSEAIAF 357
P+ +TF +L+D K G ++ A L ++ ++P+I YN+L+DGYC +SEA
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 358 LLELERFKVSPDVITYSILIRGLCSAGRTEEADNIFEKMMKDGIPANSVTYNSLINGCCK 417
L + R K SPD++T++ LI+G C R ++ +F + K G+ AN+VTY+ L+ G C+
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 418 EGNMKKALEICSRMTENGVEPNVITFSILIDGYCKIRNLRAAMGIYSEMVIKSLSPDVVA 477
G +K A E+ M +GV P+V+T+ IL+DG C L A+ I+ ++ + +V
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475
Query: 478 YTAMIDGHCKYGSMKEALKLYSDMLDNGLTPNCYTISCLLDGLCKDGRISNALKLFTENT 537
YT +I+G CK G +++A L+ + G+ PN T + ++ GLCK G +S A L +
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK-- 535
Query: 538 GFQTTRCDVNAGGSKPSFTNHVVYTALIHGLCEDGQIFKAAKLFSDMRCYGLQPD 593
+ G+ P N Y LI DG + +AKL +M+ G D
Sbjct: 536 --------MEEDGNAP---NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577
BLAST of Lsi02G016960 vs. TAIR 10
Match:
AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 275.8 bits (704), Expect = 8.9e-74
Identity = 159/560 (28.39%), Postives = 276/560 (49.29%), Query Frame = 0
Query: 67 EKNTQLYSAIIHVLVGSKLFSHARCLLKGLVENLLRKSHKRYHVCQLAFNALSQLKSSKF 126
+ N + +IH+ V SK A+ L+ E K + Q + K
Sbjct: 116 DSNLESLCIVIHLAVASKDLKVAQSLISSFWER--PKLNVTDSFVQFFDLLVYTYKDWGS 175
Query: 127 TPNVYGELLIVLSKMGLVEEALWMYRKV---GAALAKQACNVLLDVL----VKTGKFELL 186
P V+ VL GL+ EA ++ K+ G L+ +CNV L L KT ++
Sbjct: 176 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 235
Query: 187 WRIFEEMISNGLSPDVITYGILIDGCCRQGDLLRAHEMFDEMRAKGIEPTVVVYTILIRG 246
+R F E+ G+ +V +Y I+I C+ G + AH + M KG P V+ Y+ ++ G
Sbjct: 236 FREFPEV---GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNG 295
Query: 247 LCSENKMEEAESMHRAMREVGVLPNVYTYNTLMDGYCKLANAKQALRLYQDMIGEGLVPD 306
C ++++ + M+ G+ PN Y Y +++ C++ +A + +MI +G++PD
Sbjct: 296 YCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 355
Query: 307 DVTFGILIDGLCKFGDIKAARNLSVNIVKFSVTPSIAVYNSLIDGYCRAGDVSEAIAFLL 366
V + LIDG CK GDI+AA + +TP + Y ++I G+C+ GD+ EA
Sbjct: 356 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 415
Query: 367 ELERFKVSPDVITYSILIRGLCSAGRTEEADNIFEKMMKDGIPANSVTYNSLINGCCKEG 426
E+ + PD +T++ LI G C AG ++A + M++ G N VTY +LI+G CKEG
Sbjct: 416 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 475
Query: 427 NMKKALEICSRMTENGVEPNVITFSILIDGYCKIRNLRAAMGIYSEMVIKSLSPDVVAYT 486
++ A E+ M + G++PN+ T++ +++G CK N+ A+ + E L+ D V YT
Sbjct: 476 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 535
Query: 487 AMIDGHCKYGSMKEALKLYSDMLDNGLTPNCYTISCLLDGLCKDGRISNALKLFTENTGF 546
++D +CK G M +A ++ +ML GL P T + L++G C G + + KL
Sbjct: 536 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL------- 595
Query: 547 QTTRCDVNAGGSKPSFTNHVVYTALIHGLCEDGQIFKAAKLFSDMRCYGLQPDEVIYVVM 606
+N +K N + +L+ C + A ++ DM G+ PD Y +
Sbjct: 596 ------LNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 655
Query: 607 LQGYFQVKRILDVMMLHADI 620
++G+ + + + + L ++
Sbjct: 656 VKGHCKARNMKEAWFLFQEM 657
BLAST of Lsi02G016960 vs. TAIR 10
Match:
AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 275.8 bits (704), Expect = 8.9e-74
Identity = 159/560 (28.39%), Postives = 276/560 (49.29%), Query Frame = 0
Query: 67 EKNTQLYSAIIHVLVGSKLFSHARCLLKGLVENLLRKSHKRYHVCQLAFNALSQLKSSKF 126
+ N + +IH+ V SK A+ L+ E K + Q + K
Sbjct: 116 DSNLESLCIVIHLAVASKDLKVAQSLISSFWER--PKLNVTDSFVQFFDLLVYTYKDWGS 175
Query: 127 TPNVYGELLIVLSKMGLVEEALWMYRKV---GAALAKQACNVLLDVL----VKTGKFELL 186
P V+ VL GL+ EA ++ K+ G L+ +CNV L L KT ++
Sbjct: 176 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 235
Query: 187 WRIFEEMISNGLSPDVITYGILIDGCCRQGDLLRAHEMFDEMRAKGIEPTVVVYTILIRG 246
+R F E+ G+ +V +Y I+I C+ G + AH + M KG P V+ Y+ ++ G
Sbjct: 236 FREFPEV---GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNG 295
Query: 247 LCSENKMEEAESMHRAMREVGVLPNVYTYNTLMDGYCKLANAKQALRLYQDMIGEGLVPD 306
C ++++ + M+ G+ PN Y Y +++ C++ +A + +MI +G++PD
Sbjct: 296 YCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 355
Query: 307 DVTFGILIDGLCKFGDIKAARNLSVNIVKFSVTPSIAVYNSLIDGYCRAGDVSEAIAFLL 366
V + LIDG CK GDI+AA + +TP + Y ++I G+C+ GD+ EA
Sbjct: 356 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 415
Query: 367 ELERFKVSPDVITYSILIRGLCSAGRTEEADNIFEKMMKDGIPANSVTYNSLINGCCKEG 426
E+ + PD +T++ LI G C AG ++A + M++ G N VTY +LI+G CKEG
Sbjct: 416 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 475
Query: 427 NMKKALEICSRMTENGVEPNVITFSILIDGYCKIRNLRAAMGIYSEMVIKSLSPDVVAYT 486
++ A E+ M + G++PN+ T++ +++G CK N+ A+ + E L+ D V YT
Sbjct: 476 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 535
Query: 487 AMIDGHCKYGSMKEALKLYSDMLDNGLTPNCYTISCLLDGLCKDGRISNALKLFTENTGF 546
++D +CK G M +A ++ +ML GL P T + L++G C G + + KL
Sbjct: 536 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL------- 595
Query: 547 QTTRCDVNAGGSKPSFTNHVVYTALIHGLCEDGQIFKAAKLFSDMRCYGLQPDEVIYVVM 606
+N +K N + +L+ C + A ++ DM G+ PD Y +
Sbjct: 596 ------LNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 655
Query: 607 LQGYFQVKRILDVMMLHADI 620
++G+ + + + + L ++
Sbjct: 656 VKGHCKARNMKEAWFLFQEM 657
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9FLJ4 | 3.9e-151 | 45.26 | Pentatricopeptide repeat-containing protein At5g61400 OS=Arabidopsis thaliana OX... | [more] |
P0C894 | 7.6e-78 | 29.81 | Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis th... | [more] |
Q9LFC5 | 1.3e-72 | 28.62 | Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX... | [more] |
Q9LSL9 | 1.3e-72 | 32.65 | Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX... | [more] |
Q0WVK7 | 1.3e-72 | 28.39 | Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1JTD6 | 5.1e-287 | 84.94 | pentatricopeptide repeat-containing protein At5g61400 OS=Cucurbita maxima OX=366... | [more] |
A0A6J1H5I4 | 2.4e-284 | 84.76 | LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g61400 OS=Cu... | [more] |
A0A0A0KS30 | 9.1e-276 | 83.89 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G496480 PE=4 SV=1 | [more] |
A0A5D3C3E1 | 6.5e-274 | 83.19 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S4E4Z4 | 6.5e-274 | 83.19 | pentatricopeptide repeat-containing protein At5g61400 isoform X2 OS=Cucumis melo... | [more] |
Match Name | E-value | Identity | Description | |
XP_038890299.1 | 9.2e-299 | 88.97 | pentatricopeptide repeat-containing protein At5g61400, partial [Benincasa hispid... | [more] |
XP_022990473.1 | 1.1e-286 | 84.94 | pentatricopeptide repeat-containing protein At5g61400 [Cucurbita maxima] | [more] |
XP_023517041.1 | 1.5e-285 | 85.29 | pentatricopeptide repeat-containing protein At5g61400 [Cucurbita pepo subsp. pep... | [more] |
KAG7033017.1 | 2.2e-284 | 84.94 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022959787.1 | 4.9e-284 | 84.76 | LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g61400 [Cucu... | [more] |
Match Name | E-value | Identity | Description | |
AT5G61400.1 | 2.8e-152 | 45.26 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G02150.1 | 5.4e-79 | 29.81 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G12700.1 | 6.8e-74 | 30.74 | ATP binding;nucleic acid binding;helicases | [more] |
AT1G05670.1 | 8.9e-74 | 28.39 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT1G05670.2 | 8.9e-74 | 28.39 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |