Lsi02G016890 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G016890
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	LisH domain-containing protein
Location	chr02: 22662453 .. 22665119 (-)
RNA-Seq Expression	Lsi02G016890
Synteny	Lsi02G016890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTTTTTTGGTGGAAGGAAGTTTGGAAATCCAATGGATTTGATTTGGGGGGGGAGTGTGTTGGGGAACTACGATAGTGTATAAATTATTAGGTCTATTGACTACCCTATTTTGCATGTCCTTGGGTGCAGCGTTTTAATTATTTTCACTTAGGTTGGAAAATCTTGAATTAAAGTATATTTGTATGTTTATTTTATACCTTCTTCGTCTATAATAATAAATGGTTTTATTTTATTTTATTTTTAGGAACTAAAACTATTGAAAAATATGAAAGATTATACGTGTTATATATTTAACTAATTTGATATTACATGCATGTTTTAATTTATGCATAAGAGAATTTAAATTAAATTGATTGAATAGAATAACTTTATATTAAATTTTAATTTATACTAATTAATTATCATTGTACATTAACTCTTAATAGCTAAAATACATCATGCTATTAAAATAATATAAATAAAACATTATAAAAAGGACAAATTTAAACCTTCAAATTATTAATTTTTATTTTGATTACCTACTTAATTTCAAACTTTTATTTTATTTATATCACTGTATCATTTGATTACTTACTCAGTTTCAAGTTTCAATTTAAACCAAACTAATACTTTTAAATTTGTTTGAATTAACTATTTAATATATTCCTGTTTCAACTAATAGTAGGAGTATTATGGTCCCATTGTTTTAGTTAAAAATCTTTGATTTTTTCATTTAGCCATTTTTACAAATTGAAATGGCTACTTCTAAGTTGATGTTTAAAATTAACTATTTCCATTATTATAGCCCTAACAAGTAAAGATTAAGGGGGCGTTTTGGAGCACATAGTTGAGTTAAGTTGGTAATTATTATAGGTAGAGCGTAATTGGAGGAGTTGACACGAATAACGAAGTGAGAAATGTGACTTAATGCTAATAACGAGGTAATAAACCTCTTATTATTCTTAGAAATCCTTCGAATGACTATAGGTCAAATGCTAAATTATATAATATAATATAATTAGAATGCATTTGTAAATTTAGTTACACAGTAACTTTTATTAAAAATCCATCAATCAAGGTAGTAGAGAATGCAGGAAGCATATGAGGACTCCGACGCGTCACAAATTAAATCTAGTGTGAACACTTAGCCTCTCCAAGTCTTATTATAACAACCCCATATTGCCTTTTTATGAAATTTATGACATTGCATGGACGACATAGGAAGGAGAGAGATTAAGAATAATGAAATAACTAATGGACACTTAATTGAAAGTTGACTATGATCGTTCGAAGTCTAATTCGATGAAATATTAAATTTTAAAATTCAAATCAAAATTTGAAGATGTATGAATTTGGAGAATTCTCAAACTAAAAACTGATATTAATGCTAAAATATCCACATGGCAAACGTGAAGGAAGGTCAATTTTACAAGTATTGGGCCTGAGGCCCAAATCCAAATGATGAAAGAGGAACAGCCCAGTTAGGTAAACGTGAAGGAAGGTCAATTTTACAAGTATTGGGCCTAAGGCTCACATCCAAATGATGAAAAGAGGAACAGCTCAATTAGGTAAACGTGAAAGAAGGTCAATTTTAGAAGTATTGGGCCTGAGGCCCACATCCCAAAGGAGGAAAGAAGAACGGCCCAGGTTAGGCAAACGTGAAGGAAACTGCAGCCTTGAATGGAGCCCACACCCACAAGCTCCGATAACAGTGACGATCACGATTTCACGATTCATTTTTTGACGCTCTTTTGCTTTGCTATGCTTTGCTTTCATCCTCCATTTTTGCTCCCTTTGATGCCCACATCTCCGTAGTTGATGTTATTACGCGCCTTCACGCAGAGCTCCGGAAAATCGTCACAGCAAAGCCAAGGCCGAAGGATTGCTCAAACATGGACGATTATACCAGAGAAATGATGGACTTGAAGACCCTTGTCACTCGGACTCTCGAGAAGAAGGGCGTCCTCGCTAAGATCCGTGTAATTTTTTTTTTTTACTTTTTCATCTCATTCTTGTATTTTATGCTGTTGTTTCCTTCAAATTTCTTCTATTCTGGCCTATACGGATCTTTCATTGTTATTCTTTGTACTGAATTTCTTGGATTTTTTGGGGTTCTTGTGTTGCTGGTTGGTGAGACTGAATGTGGTAGGTTAAGGCTAGGGTTTTGTTTCTACTTTTAGATTTAGAAGGACGTAGGACGGAGGAGACTGAATCTTTCTCTGTCTCTCTATTTTCTTTAGTGTTAAGCTGGTTGTAATTATAATGCAATTATTTGGATAAACTGAATCATCATCCCCTTGGATCTTGGACTGGTTGAGAAGCATCTACTTCTTGTGTTATGTTGTGTCTCCATTATTTATTCTTAAGATATCTTTGGCATCGATCTGATGTTAGGGGTCTTTAGTATTTACTACTTTTGAAGGAATATTTAATTATGTTCATAAAAAATCGTTCACCCTTCCTTCCTTTCTTTTTTCCCCTCACCTTTTCTTTTCTTTTTCTTTTGGTTATATGCCAGGCTGAACTTAGAGCTAGTGTATTCGAGGCAATTGAAGAAGAGGATCGTGTTATTGAGAAAGATGATGGATTGCCGCCTGCTTTACTTGGTAGTTGCAATGATCGAGCAAAGCAGCTTCATGCTTCACCATCAGGTTCGATTACAAAAATTTTTCTCCCCTCTTGA

mRNA sequence

ATGAAGCTCCGGAAAATCGTCACAGCAAAGCCAAGGCCGAAGGATTGCTCAAACATGGACGATTATACCAGAGAAATGATGGACTTGAAGACCCTTGTCACTCGGACTCTCGAGAAGAAGGGCGTCCTCGCTAAGATCCGTGCTGAACTTAGAGCTAGTGTATTCGAGGCAATTGAAGAAGAGGATCGTGTTATTGAGAAAGATGATGGATTGCCGCCTGCTTTACTTGGTAGTTGCAATGATCGAGCAAAGCAGCTTCATGCTTCACCATCAGGTTCGATTACAAAAATTTTTCTCCCCTCTTGA

Coding sequence (CDS)

ATGAAGCTCCGGAAAATCGTCACAGCAAAGCCAAGGCCGAAGGATTGCTCAAACATGGACGATTATACCAGAGAAATGATGGACTTGAAGACCCTTGTCACTCGGACTCTCGAGAAGAAGGGCGTCCTCGCTAAGATCCGTGCTGAACTTAGAGCTAGTGTATTCGAGGCAATTGAAGAAGAGGATCGTGTTATTGAGAAAGATGATGGATTGCCGCCTGCTTTACTTGGTAGTTGCAATGATCGAGCAAAGCAGCTTCATGCTTCACCATCAGGTTCGATTACAAAAATTTTTCTCCCCTCTTGA

Protein sequence

MKLRKIVTAKPRPKDCSNMDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGSCNDRAKQLHASPSGSITKIFLPS

Homology

[Close]

BLAST of Lsi02G016890 vs. ExPASy Swiss-Prot
Match: Q9FQ24 (Protein TONNEAU 1b OS=Arabidopsis thaliana OX=3702 GN=TON1B PE=1 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.3e-32
Identity = 70/76 (92.11%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 19 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 78
          MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIE ++GLPPALLGS
Sbjct: 1  MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIENNEGLPPALLGS 60

Query: 79 CNDRAKQLHASPSGSI 95
          CNDRA+QLHASPSG +
Sbjct: 61 CNDRARQLHASPSGRL 76

[Close]

BLAST of Lsi02G016890 vs. ExPASy Swiss-Prot
Match: Q9FQ25 (Protein TONNEAU 1a OS=Arabidopsis thaliana OX=3702 GN=TON1A PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.4e-31
Identity = 68/76 (89.47%), Postives = 73/76 (96.05%), Query Frame = 0


Query: 19 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 78
          MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIE ++G PPALLGS
Sbjct: 1  MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIENNEGPPPALLGS 60

Query: 79 CNDRAKQLHASPSGSI 95
          CNDRA++LHASPSG +
Sbjct: 61 CNDRARKLHASPSGRL 76

[Close]

BLAST of Lsi02G016890 vs. ExPASy Swiss-Prot
Match: O95684 (Centrosomal protein 43 OS=Homo sapiens OX=9606 GN=CEP43 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 1.9e-04
Identity = 28/74 (37.84%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 25 EMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGSCNDRAK 84
          E  +L+ L+ +TLE  GVL +I+AELRA+VF A+EE+++V  K   +  +L    N +  
Sbjct: 12 EDTELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKVENKTPLVNESLKKFLNTKDG 71

Query: 85 QLHASPSGSITKIF 99
          +L AS      + F
Sbjct: 72 RLVASLVAEFLQFF 85

[Close]

BLAST of Lsi02G016890 vs. ExPASy Swiss-Prot
Match: Q4R7V3 (Centrosomal protein 43 OS=Macaca fascicularis OX=9541 GN=CEP43 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 1.9e-04
Identity = 28/74 (37.84%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 25 EMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGSCNDRAK 84
          E  +L+ L+ +TLE  GVL +I+AELRA+VF A+EE+++V  K   +  +L    N +  
Sbjct: 12 EDTELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKVENKTPLVNESLKKFLNTKDG 71

Query: 85 QLHASPSGSITKIF 99
          +L AS      + F
Sbjct: 72 RLVASLVAEFLQFF 85

[Close]

BLAST of Lsi02G016890 vs. ExPASy Swiss-Prot
Match: Q4V7C1 (Centrosomal protein 43 OS=Rattus norvegicus OX=10116 GN=Cep43 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 1.9e-04
Identity = 28/74 (37.84%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 25 EMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGSCNDRAK 84
          E  +L+ L+ +TLE  GVL +I+AELRA+VF A+EE+++V  K   +  +L    N +  
Sbjct: 12 EDTELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKVENKTPLVNESLKKFLNTKDG 71

Query: 85 QLHASPSGSITKIF 99
          +L AS      + F
Sbjct: 72 RLVASLVAEFLQFF 85

[Close]

BLAST of Lsi02G016890 vs. ExPASy TrEMBL
Match: A0A5D3C1P8 (Protein TONNEAU 1a-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002350 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.9e-39
Identity = 84/89 (94.38%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 6   IVTAKPRPKDCSNMDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVI 65
           ++TAKPRPKDC+NMDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVI
Sbjct: 34  LLTAKPRPKDCTNMDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVI 93

Query: 66  EKDDGLPPALLGSCNDRAKQLHASPSGSI 95
           EKDDGLPPALLGSCNDRAKQLHASPSG +
Sbjct: 94  EKDDGLPPALLGSCNDRAKQLHASPSGRL 122

[Close]

BLAST of Lsi02G016890 vs. ExPASy TrEMBL
Match: A0A6A4L7S0 (Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_16732 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.0e-32
Identity = 76/83 (91.57%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 19  MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 78
           MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDR IEK++GLPPALLGS
Sbjct: 1   MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRAIEKEEGLPPALLGS 60

Query: 79  CNDRAKQLHASPSGSITKIFLPS 102
           CNDRAKQLHASPSGS++ I LPS
Sbjct: 61  CNDRAKQLHASPSGSLSNI-LPS 82

[Close]

BLAST of Lsi02G016890 vs. ExPASy TrEMBL
Match: A0A0A0KS40 (LisH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G503600 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 5.1e-32
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 19 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 78
          MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS
Sbjct: 1  MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 60

Query: 79 CNDRAKQLHASPSGSI 95
          CNDRAKQLHASPSG +
Sbjct: 61 CNDRAKQLHASPSGRL 76

[Close]

BLAST of Lsi02G016890 vs. ExPASy TrEMBL
Match: A0A1S3CJH5 (protein TONNEAU 1a-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501672 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 5.1e-32
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 19 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 78
          MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS
Sbjct: 1  MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 60

Query: 79 CNDRAKQLHASPSGSI 95
          CNDRAKQLHASPSG +
Sbjct: 61 CNDRAKQLHASPSGRL 76

[Close]

BLAST of Lsi02G016890 vs. ExPASy TrEMBL
Match: A0A1S3CL40 (protein TONNEAU 1b-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501672 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 5.1e-32
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 19 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 78
          MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS
Sbjct: 1  MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 60

Query: 79 CNDRAKQLHASPSGSI 95
          CNDRAKQLHASPSG +
Sbjct: 61 CNDRAKQLHASPSGRL 76

[Close]

BLAST of Lsi02G016890 vs. NCBI nr
Match: TYK05747.1 (protein TONNEAU 1a-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 171.4 bits (433), Expect = 4.0e-39
Identity = 84/89 (94.38%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 6   IVTAKPRPKDCSNMDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVI 65
           ++TAKPRPKDC+NMDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVI
Sbjct: 34  LLTAKPRPKDCTNMDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVI 93

Query: 66  EKDDGLPPALLGSCNDRAKQLHASPSGSI 95
           EKDDGLPPALLGSCNDRAKQLHASPSG +
Sbjct: 94  EKDDGLPPALLGSCNDRAKQLHASPSGRL 122

[Close]

BLAST of Lsi02G016890 vs. NCBI nr
Match: KAE9451329.1 (hypothetical protein C3L33_16732, partial [Rhododendron williamsianum])

HSP 1 Score: 147.5 bits (371), Expect = 6.1e-32
Identity = 76/83 (91.57%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 19  MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 78
           MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDR IEK++GLPPALLGS
Sbjct: 1   MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRAIEKEEGLPPALLGS 60

Query: 79  CNDRAKQLHASPSGSITKIFLPS 102
           CNDRAKQLHASPSGS++ I LPS
Sbjct: 61  CNDRAKQLHASPSGSLSNI-LPS 82

[Close]

BLAST of Lsi02G016890 vs. NCBI nr
Match: XP_038889100.1 (protein TONNEAU 1b-like isoform X2 [Benincasa hispida])

HSP 1 Score: 146.7 bits (369), Expect = 1.0e-31
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 19 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 78
          MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS
Sbjct: 1  MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 60

Query: 79 CNDRAKQLHASPSGSI 95
          CNDRAKQLHASPSG +
Sbjct: 61 CNDRAKQLHASPSGRL 76

[Close]

BLAST of Lsi02G016890 vs. NCBI nr
Match: XP_038889099.1 (protein TONNEAU 1a-like isoform X1 [Benincasa hispida])

HSP 1 Score: 146.7 bits (369), Expect = 1.0e-31
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 19 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 78
          MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS
Sbjct: 1  MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 60

Query: 79 CNDRAKQLHASPSGSI 95
          CNDRAKQLHASPSG +
Sbjct: 61 CNDRAKQLHASPSGRL 76

[Close]

BLAST of Lsi02G016890 vs. NCBI nr
Match: XP_008463551.1 (PREDICTED: protein TONNEAU 1b-like isoform X2 [Cucumis melo])

HSP 1 Score: 146.7 bits (369), Expect = 1.0e-31
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 19 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 78
          MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS
Sbjct: 1  MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 60

Query: 79 CNDRAKQLHASPSGSI 95
          CNDRAKQLHASPSG +
Sbjct: 61 CNDRAKQLHASPSGRL 76

[Close]

BLAST of Lsi02G016890 vs. TAIR 10
Match: AT3G55005.1 (tonneau 1b (TON1b) )

HSP 1 Score: 140.2 bits (352), Expect = 9.1e-34
Identity = 70/76 (92.11%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 19 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 78
          MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIE ++GLPPALLGS
Sbjct: 1  MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIENNEGLPPALLGS 60

Query: 79 CNDRAKQLHASPSGSI 95
          CNDRA+QLHASPSG +
Sbjct: 61 CNDRARQLHASPSGRL 76

[Close]

BLAST of Lsi02G016890 vs. TAIR 10
Match: AT3G55000.1 (tonneau family protein )

HSP 1 Score: 136.0 bits (341), Expect = 1.7e-32
Identity = 68/76 (89.47%), Postives = 73/76 (96.05%), Query Frame = 0


Query: 19 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 78
          MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIE ++G PPALLGS
Sbjct: 1  MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIENNEGPPPALLGS 60

Query: 79 CNDRAKQLHASPSGSI 95
          CNDRA++LHASPSG +
Sbjct: 61 CNDRARKLHASPSGRL 76

The following BLAST results are available for this feature:

BLAST of Lsi02G016890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FQ24	1.3e-32	92.11	Protein TONNEAU 1b OS=Arabidopsis thaliana OX=3702 GN=TON1B PE=1 SV=1	[more]
Q9FQ25	2.4e-31	89.47	Protein TONNEAU 1a OS=Arabidopsis thaliana OX=3702 GN=TON1A PE=1 SV=1	[more]
O95684	1.9e-04	37.84	Centrosomal protein 43 OS=Homo sapiens OX=9606 GN=CEP43 PE=1 SV=1	[more]
Q4R7V3	1.9e-04	37.84	Centrosomal protein 43 OS=Macaca fascicularis OX=9541 GN=CEP43 PE=2 SV=1	[more]
Q4V7C1	1.9e-04	37.84	Centrosomal protein 43 OS=Rattus norvegicus OX=10116 GN=Cep43 PE=1 SV=1	[more]

BLAST of Lsi02G016890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C1P8	1.9e-39	94.38	Protein TONNEAU 1a-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6A4L7S0	3.0e-32	91.57	Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3...	[more]
A0A0A0KS40	5.1e-32	97.37	LisH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G503600 PE=4 S...	[more]
A0A1S3CJH5	5.1e-32	97.37	protein TONNEAU 1a-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501672 PE=4 ...	[more]
A0A1S3CL40	5.1e-32	97.37	protein TONNEAU 1b-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501672 PE=4 ...	[more]

BLAST of Lsi02G016890 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK05747.1	4.0e-39	94.38	protein TONNEAU 1a-like isoform X1 [Cucumis melo var. makuwa]	[more]
KAE9451329.1	6.1e-32	91.57	hypothetical protein C3L33_16732, partial [Rhododendron williamsianum]	[more]
XP_038889100.1	1.0e-31	97.37	protein TONNEAU 1b-like isoform X2 [Benincasa hispida]	[more]
XP_038889099.1	1.0e-31	97.37	protein TONNEAU 1a-like isoform X1 [Benincasa hispida]	[more]
XP_008463551.1	1.0e-31	97.37	PREDICTED: protein TONNEAU 1b-like isoform X2 [Cucumis melo]	[more]

BLAST of Lsi02G016890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55005.1	9.1e-34	92.11	tonneau 1b (TON1b)	[more]
AT3G55000.1	1.7e-32	89.47	tonneau family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15431:SF16	PROTEIN TONNEAU 1B	coord: 19..94
None	No IPR available	PANTHER	PTHR15431	FGFR1 ONCOGENE PARTNER/LISH DOMAIN-CONTAINING PROTEIN	coord: 19..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G016890.1	Lsi02G016890.1	mRNA