Lsi02G016810 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi02G016810
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionChalcone--flavanone isomerase
Locationchr02: 22611107 .. 22611593 (+)
RNA-Seq ExpressionLsi02G016810
SyntenyLsi02G016810
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCCGGTGGCTGATCTCGGCGGTCTTCAGGTCGAGAACGTGAAATTTCCGGCGGAAATCAAACCTCCGGCCTCCGCTAAGGCTCTATTCCTCGGCGGCGCAGGTACGATTTTTCTCCGCCGCGATCCGATAGACTGTGATCGTTTTTAACCGCTTTTTCTTTATTCTTACTAAAACTGTGCAGGAGTTAGGGCGTTGCAGATCGGAGGAAACACCGTGAAATTTACTGCGATCGGTGTTTACTTGGAGGAGAAAGCTGTACCGTCGCTCGCCGGTAACTGGAGTGGAAAGAGTGCGGCGGAGTTGATGGATTCCGTTGAGTTCTTCAGAGACGTCGTAACTGGTGAGTTAACTGATTTTCTTTTTTAATCTTTTGTAAACTGTACTCGAGAAATTAGAGATGACTGCTAGATTTCCGCCGTGCCGGCCGCCGGATGTCACTGGTGTTCCGGTGACTTCACTTTTTAACTTGCTAGATCGTTGA

mRNA sequence

ATGGCGCCGGTCGAGAACGTGAAATTTCCGGCGGAAATCAAACCTCCGGCCTCCGCTAAGGCTCTATTCCTCGGCGGCGCAGGAGTTAGGGCGTTGCAGATCGGAGGAAACACCGTGAAATTTACTGCGATCGGTGTTTACTTGGAGGAGAAAGCTGTACCGTCGCTCGCCGGTAACTGGAGTGGAAAGAGTGCGGCGGAGTTGATGGATTCCGTTGAGTTCTTCAGAGACGTCGTAACTGAGATGACTGCTAGATTTCCGCCGTGCCGGCCGCCGGATGTCACTGGTGTTCCGGTGACTTCACTTTTTAACTTGCTAGATCGTTGA

Coding sequence (CDS)

ATGGCGCCGGTCGAGAACGTGAAATTTCCGGCGGAAATCAAACCTCCGGCCTCCGCTAAGGCTCTATTCCTCGGCGGCGCAGGAGTTAGGGCGTTGCAGATCGGAGGAAACACCGTGAAATTTACTGCGATCGGTGTTTACTTGGAGGAGAAAGCTGTACCGTCGCTCGCCGGTAACTGGAGTGGAAAGAGTGCGGCGGAGTTGATGGATTCCGTTGAGTTCTTCAGAGACGTCGTAACTGAGATGACTGCTAGATTTCCGCCGTGCCGGCCGCCGGATGTCACTGGTGTTCCGGTGACTTCACTTTTTAACTTGCTAGATCGTTGA

Protein sequence

MAPVENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGKSAAELMDSVEFFRDVVTEMTARFPPCRPPDVTGVPVTSLFNLLDR
Homology
[Close]
BLAST of Lsi02G016810 vs. ExPASy Swiss-Prot
Match: O65333 (Chalcone--flavanone isomerase OS=Elaeagnus umbellata OX=43233 GN=CHI PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-24
Identity = 55/83 (66.27%), Postives = 65/83 (78.31%), Query Frame = 0 

Query: 4  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGK 63
          VE+V FP E+KPP S+K LFLGGAGVR ++I G  +KFTAIGVYLE+ AVPSLA  W GK
Sbjct: 13 VESVIFPPEVKPPGSSKTLFLGGAGVRGIEIQGKFIKFTAIGVYLEDNAVPSLAVKWKGK 72

Query: 64 SAAELMDSVEFFRDVVTEMTARF 87
          SA EL +SVEFFRD+VT    +F
Sbjct: 73 SAQELTESVEFFRDIVTGPMEKF 95

[Close]
BLAST of Lsi02G016810 vs. ExPASy Swiss-Prot
Match: A1E260 (Chalcone--flavanone isomerase 1 OS=Chrysanthemum morifolium OX=41568 GN=CHI1 PE=2 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 1.4e-24
Identity = 52/83 (62.65%), Postives = 64/83 (77.11%), Query Frame = 0 

Query: 4  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGK 63
          VEN+ FP+ +KPP     LFLGGAGVR ++I GN VKFT IGVYLE+KA+P LAG W GK
Sbjct: 12 VENIVFPSSVKPPGDTNTLFLGGAGVRGMEIQGNFVKFTGIGVYLEDKAIPLLAGKWKGK 71

Query: 64 SAAELMDSVEFFRDVVTEMTARF 87
          +A EL++SVEFFRD+VT    +F
Sbjct: 72 TAEELVNSVEFFRDIVTGPFKKF 94

[Close]
BLAST of Lsi02G016810 vs. ExPASy Swiss-Prot
Match: A1E261 (Chalcone--flavanone isomerase 2 OS=Chrysanthemum morifolium OX=41568 GN=CHI2 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.4e-24
Identity = 52/83 (62.65%), Postives = 64/83 (77.11%), Query Frame = 0 

Query: 4  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGK 63
          VEN+ FP+ +KPP     LFLGGAGVR ++I GN VKFT IGVYLE+KA+P LAG W GK
Sbjct: 12 VENIVFPSSVKPPGDTNTLFLGGAGVRGMEIQGNFVKFTGIGVYLEDKAIPLLAGKWKGK 71

Query: 64 SAAELMDSVEFFRDVVTEMTARF 87
          +A EL++SVEFFRD+VT    +F
Sbjct: 72 TAEELVNSVEFFRDIVTGPFKKF 94

[Close]
BLAST of Lsi02G016810 vs. ExPASy Swiss-Prot
Match: Q8LKP9 (Chalcone--flavanone isomerase OS=Saussurea medusa OX=137893 GN=CHI PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-23
Identity = 51/83 (61.45%), Postives = 64/83 (77.11%), Query Frame = 0 

Query: 4  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGK 63
          VE++ FP  +KPP +   LFLGGAGVR ++I GN VKFT IGVYLE+KA+PSLA  W GK
Sbjct: 12 VESIVFPPSVKPPGATTTLFLGGAGVRGMEIQGNFVKFTGIGVYLEDKAIPSLAVKWKGK 71

Query: 64 SAAELMDSVEFFRDVVTEMTARF 87
          +AAEL DSV+F+RD+VT    +F
Sbjct: 72 TAAELTDSVQFYRDIVTGPFEKF 94

[Close]
BLAST of Lsi02G016810 vs. ExPASy Swiss-Prot
Match: Q42663 (Chalcone--flavanone isomerase (Fragment) OS=Callistephus chinensis OX=13379 GN=CHI PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 4.4e-23
Identity = 51/83 (61.45%), Postives = 64/83 (77.11%), Query Frame = 0 

Query: 4  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGK 63
          VE++ FP+ +KPP S  +LFLGGAGVR ++I GN VKFT IGVYLE+KA+P LA    GK
Sbjct: 12 VESIVFPSSVKPPGSTNSLFLGGAGVRGMEIQGNFVKFTGIGVYLEDKAIPLLAAKRKGK 71

Query: 64 SAAELMDSVEFFRDVVTEMTARF 87
          + AEL+DSVEFFRD+VT    +F
Sbjct: 72 TVAELLDSVEFFRDIVTGPFEKF 94

[Close]
BLAST of Lsi02G016810 vs. ExPASy TrEMBL
Match: A0A5D3C1D7 (Chalcone-flavonone isomerase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002420 PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.3e-30
Identity = 69/77 (89.61%), Postives = 74/77 (96.10%), Query Frame = 0 

Query: 4  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGK 63
          VEN++FP EIKPPAS+K LFLGGAGVRAL+IGGNTVKFTAIGVYLE+KAVPSLAG WSGK
Sbjct: 12 VENLQFPPEIKPPASSKTLFLGGAGVRALEIGGNTVKFTAIGVYLEDKAVPSLAGKWSGK 71

Query: 64 SAAELMDSVEFFRDVVT 81
          SAAELMDSVEFFRDVVT
Sbjct: 72 SAAELMDSVEFFRDVVT 88

[Close]
BLAST of Lsi02G016810 vs. ExPASy TrEMBL
Match: A0A1S3CJH4 (Chalcone-flavonone isomerase family protein OS=Cucumis melo OX=3656 GN=LOC103501663 PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.3e-30
Identity = 69/77 (89.61%), Postives = 74/77 (96.10%), Query Frame = 0 

Query: 4  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGK 63
          VEN++FP EIKPPAS+K LFLGGAGVRAL+IGGNTVKFTAIGVYLE+KAVPSLAG WSGK
Sbjct: 12 VENLQFPPEIKPPASSKTLFLGGAGVRALEIGGNTVKFTAIGVYLEDKAVPSLAGKWSGK 71

Query: 64 SAAELMDSVEFFRDVVT 81
          SAAELMDSVEFFRDVVT
Sbjct: 72 SAAELMDSVEFFRDVVT 88

[Close]
BLAST of Lsi02G016810 vs. ExPASy TrEMBL
Match: A0A0A0KU44 (Chalcone-flavonone isomerase family protein OS=Cucumis sativus OX=3659 GN=Csa_5G505170 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.9e-30
Identity = 69/77 (89.61%), Postives = 72/77 (93.51%), Query Frame = 0 

Query: 4  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGK 63
          VE V FPAEIKPPASA  LFLGGAGVRAL+IGGNTVKFTAIG+YLE+KAVPSLAG WSGK
Sbjct: 9  VETVNFPAEIKPPASANTLFLGGAGVRALEIGGNTVKFTAIGIYLEDKAVPSLAGKWSGK 68

Query: 64 SAAELMDSVEFFRDVVT 81
          SAAELMDSVEFFRDVVT
Sbjct: 69 SAAELMDSVEFFRDVVT 85

[Close]
BLAST of Lsi02G016810 vs. ExPASy TrEMBL
Match: A0A6J1BX19 (Chalcone-flavonone isomerase family protein OS=Momordica charantia OX=3673 GN=LOC111006117 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.1e-27
Identity = 67/83 (80.72%), Postives = 71/83 (85.54%), Query Frame = 0 

Query: 4  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGK 63
          VENV FP +IKPPASAK LFLGGAGVRAL+IGGN+VKFTAIGVYLEE AV  LAG WSGK
Sbjct: 12 VENVPFPPQIKPPASAKTLFLGGAGVRALEIGGNSVKFTAIGVYLEEDAVAPLAGKWSGK 71

Query: 64 SAAELMDSVEFFRDVVTEMTARF 87
          SA ELMDSVEFFRDVVT    +F
Sbjct: 72 SAEELMDSVEFFRDVVTGPFEKF 94

[Close]
BLAST of Lsi02G016810 vs. ExPASy TrEMBL
Match: A0A6J1K162 (Chalcone-flavonone isomerase family protein OS=Cucurbita maxima OX=3661 GN=LOC111489212 PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.0e-26
Identity = 63/83 (75.90%), Postives = 71/83 (85.54%), Query Frame = 0 

Query: 4  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGK 63
          VENVKFP +IKPPASAK LFLGGAGVR L+I GN+VKFTAIGVYLE+ A+P LAG W GK
Sbjct: 12 VENVKFPEQIKPPASAKTLFLGGAGVRELEIEGNSVKFTAIGVYLEKDALPLLAGKWKGK 71

Query: 64 SAAELMDSVEFFRDVVTEMTARF 87
          SAAELMDS EFFRD+VT  + +F
Sbjct: 72 SAAELMDSDEFFRDIVTGPSEKF 94

[Close]
BLAST of Lsi02G016810 vs. NCBI nr
Match: XP_038890831.1 (chalcone--flavonone isomerase [Benincasa hispida])

HSP 1 Score: 143.7 bits (361), Expect = 9.5e-31
Identity = 72/77 (93.51%), Postives = 73/77 (94.81%), Query Frame = 0 

Query: 4  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGK 63
          VENVKFPAEIKPPASAK LFLGGAGVRAL+IGGNTVKFTAIGVYLEEKAVP LA  WSGK
Sbjct: 12 VENVKFPAEIKPPASAKTLFLGGAGVRALEIGGNTVKFTAIGVYLEEKAVPLLASKWSGK 71

Query: 64 SAAELMDSVEFFRDVVT 81
          SAAELMDSVEFFRDVVT
Sbjct: 72 SAAELMDSVEFFRDVVT 88

[Close]
BLAST of Lsi02G016810 vs. NCBI nr
Match: XP_008463530.1 (PREDICTED: chalcone--flavonone isomerase [Cucumis melo] >TYK05753.1 chalcone--flavonone isomerase [Cucumis melo var. makuwa])

HSP 1 Score: 141.4 bits (355), Expect = 4.7e-30
Identity = 69/77 (89.61%), Postives = 74/77 (96.10%), Query Frame = 0 

Query: 4  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGK 63
          VEN++FP EIKPPAS+K LFLGGAGVRAL+IGGNTVKFTAIGVYLE+KAVPSLAG WSGK
Sbjct: 12 VENLQFPPEIKPPASSKTLFLGGAGVRALEIGGNTVKFTAIGVYLEDKAVPSLAGKWSGK 71

Query: 64 SAAELMDSVEFFRDVVT 81
          SAAELMDSVEFFRDVVT
Sbjct: 72 SAAELMDSVEFFRDVVT 88

[Close]
BLAST of Lsi02G016810 vs. NCBI nr
Match: XP_004149817.1 (chalcone--flavonone isomerase [Cucumis sativus] >KGN51256.1 hypothetical protein Csa_007806 [Cucumis sativus])

HSP 1 Score: 140.6 bits (353), Expect = 8.0e-30
Identity = 69/77 (89.61%), Postives = 72/77 (93.51%), Query Frame = 0 

Query: 4  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGK 63
          VE V FPAEIKPPASA  LFLGGAGVRAL+IGGNTVKFTAIG+YLE+KAVPSLAG WSGK
Sbjct: 9  VETVNFPAEIKPPASANTLFLGGAGVRALEIGGNTVKFTAIGIYLEDKAVPSLAGKWSGK 68

Query: 64 SAAELMDSVEFFRDVVT 81
          SAAELMDSVEFFRDVVT
Sbjct: 69 SAAELMDSVEFFRDVVT 85

[Close]
BLAST of Lsi02G016810 vs. NCBI nr
Match: XP_022133567.1 (chalcone--flavonone isomerase [Momordica charantia])

HSP 1 Score: 132.5 bits (332), Expect = 2.2e-27
Identity = 67/83 (80.72%), Postives = 71/83 (85.54%), Query Frame = 0 

Query: 4  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGK 63
          VENV FP +IKPPASAK LFLGGAGVRAL+IGGN+VKFTAIGVYLEE AV  LAG WSGK
Sbjct: 12 VENVPFPPQIKPPASAKTLFLGGAGVRALEIGGNSVKFTAIGVYLEEDAVAPLAGKWSGK 71

Query: 64 SAAELMDSVEFFRDVVTEMTARF 87
          SA ELMDSVEFFRDVVT    +F
Sbjct: 72 SAEELMDSVEFFRDVVTGPFEKF 94

[Close]
BLAST of Lsi02G016810 vs. NCBI nr
Match: XP_023549701.1 (chalcone--flavonone isomerase [Cucurbita pepo subsp. pepo] >XP_023549702.1 chalcone--flavonone isomerase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 129.8 bits (325), Expect = 1.4e-26
Identity = 63/83 (75.90%), Postives = 71/83 (85.54%), Query Frame = 0 

Query: 4  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGK 63
          VENVKFP +IKPPASAK LFLGGAGVR L++GGN+VKFTAIGVYLE+ A+P LAG W GK
Sbjct: 12 VENVKFPEQIKPPASAKTLFLGGAGVRELEVGGNSVKFTAIGVYLEKDALPLLAGKWKGK 71

Query: 64 SAAELMDSVEFFRDVVTEMTARF 87
          SAAELMDS EFFRD+VT    +F
Sbjct: 72 SAAELMDSDEFFRDIVTGPFEKF 94

[Close]
BLAST of Lsi02G016810 vs. TAIR 10
Match: AT3G55120.1 (Chalcone-flavanone isomerase family protein )

HSP 1 Score: 90.5 bits (223), Expect = 8.9e-19
Identity = 45/83 (54.22%), Postives = 56/83 (67.47%), Query Frame = 0 

Query: 4   VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGK 63
           V++V F   +K PAS+  LFLGGAGVR L I G  V FT IGVYLE  AVPSL+  W GK
Sbjct: 21  VDSVTFVPSVKSPASSNPLFLGGAGVRGLDIQGKFVIFTVIGVYLEGNAVPSLSVKWKGK 80

Query: 64  SAAELMDSVEFFRDVVTEMTARF 87
           +  EL +S+ FFR++VT    +F
Sbjct: 81  TTEELTESIPFFREIVTGAFEKF 103

[Close]
BLAST of Lsi02G016810 vs. TAIR 10
Match: AT5G66230.2 (Chalcone-flavanone isomerase family protein )

HSP 1 Score: 70.5 bits (171), Expect = 9.5e-13
Identity = 38/77 (49.35%), Postives = 47/77 (61.04%), Query Frame = 0 

Query: 4  VENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNWSGK 63
          V+   FP  ++ PAS K LFLGGA        G  V  T IGVYLE  A+PS++  W GK
Sbjct: 11 VDAFTFPPAVESPASHKRLFLGGA--------GKFVIVTVIGVYLEAMALPSISAKWKGK 70

Query: 64 SAAELMDSVEFFRDVVT 81
          +A EL +SV FFR +VT
Sbjct: 71 NAKELTESVPFFRQLVT 79

[Close]
BLAST of Lsi02G016810 vs. TAIR 10
Match: AT5G05270.1 (Chalcone-flavanone isomerase family protein )

HSP 1 Score: 52.4 bits (124), Expect = 2.7e-07
Identity = 31/75 (41.33%), Postives = 41/75 (54.67%), Query Frame = 0 

Query: 1  MAPVENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNW 60
          M  V  V FP +I    ++K L L G G+  ++I    VKFTAIGVYL+   V +   NW
Sbjct: 5  MVMVHEVPFPPQI---ITSKPLSLLGQGITDIEIHFLQVKFTAIGVYLDPSDVKTHLDNW 64

Query: 61 SGKSAAELMDSVEFF 76
           GK+  EL    +FF
Sbjct: 65 KGKTGKELAGDDDFF 76

[Close]
BLAST of Lsi02G016810 vs. TAIR 10
Match: AT5G05270.2 (Chalcone-flavanone isomerase family protein )

HSP 1 Score: 52.4 bits (124), Expect = 2.7e-07
Identity = 31/75 (41.33%), Postives = 41/75 (54.67%), Query Frame = 0 

Query: 1  MAPVENVKFPAEIKPPASAKALFLGGAGVRALQIGGNTVKFTAIGVYLEEKAVPSLAGNW 60
          M  V  V FP +I    ++K L L G G+  ++I    VKFTAIGVYL+   V +   NW
Sbjct: 5  MVMVHEVPFPPQI---ITSKPLSLLGQGITDIEIHFLQVKFTAIGVYLDPSDVKTHLDNW 64

Query: 61 SGKSAAELMDSVEFF 76
           GK+  EL    +FF
Sbjct: 65 KGKTGKELAGDDDFF 76

The following BLAST results are available for this feature:
BLAST of Lsi02G016810 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O653331.1e-2466.27Chalcone--flavanone isomerase OS=Elaeagnus umbellata OX=43233 GN=CHI PE=2 SV=1[more]
A1E2601.4e-2462.65Chalcone--flavanone isomerase 1 OS=Chrysanthemum morifolium OX=41568 GN=CHI1 PE=... [more]
A1E2611.4e-2462.65Chalcone--flavanone isomerase 2 OS=Chrysanthemum morifolium OX=41568 GN=CHI2 PE=... [more]
Q8LKP91.2e-2361.45Chalcone--flavanone isomerase OS=Saussurea medusa OX=137893 GN=CHI PE=2 SV=1[more]
Q426634.4e-2361.45Chalcone--flavanone isomerase (Fragment) OS=Callistephus chinensis OX=13379 GN=C... [more]
BLAST of Lsi02G016810 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3C1D72.3e-3089.61Chalcone-flavonone isomerase family protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3CJH42.3e-3089.61Chalcone-flavonone isomerase family protein OS=Cucumis melo OX=3656 GN=LOC103501... [more]
A0A0A0KU443.9e-3089.61Chalcone-flavonone isomerase family protein OS=Cucumis sativus OX=3659 GN=Csa_5G... [more]
A0A6J1BX191.1e-2780.72Chalcone-flavonone isomerase family protein OS=Momordica charantia OX=3673 GN=LO... [more]
A0A6J1K1622.0e-2675.90Chalcone-flavonone isomerase family protein OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
BLAST of Lsi02G016810 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038890831.19.5e-3193.51chalcone--flavonone isomerase [Benincasa hispida][more]
XP_008463530.14.7e-3089.61PREDICTED: chalcone--flavonone isomerase [Cucumis melo] >TYK05753.1 chalcone--fl... [more]
XP_004149817.18.0e-3089.61chalcone--flavonone isomerase [Cucumis sativus] >KGN51256.1 hypothetical protein... [more]
XP_022133567.12.2e-2780.72chalcone--flavonone isomerase [Momordica charantia][more]
XP_023549701.11.4e-2675.90chalcone--flavonone isomerase [Cucurbita pepo subsp. pepo] >XP_023549702.1 chalc... [more]
BLAST of Lsi02G016810 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G55120.18.9e-1954.22Chalcone-flavanone isomerase family protein [more]
AT5G66230.29.5e-1349.35Chalcone-flavanone isomerase family protein [more]
AT5G05270.12.7e-0741.33Chalcone-flavanone isomerase family protein [more]
AT5G05270.22.7e-0741.33Chalcone-flavanone isomerase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016089Chalcone isomerase, orthogonal bundle domain superfamilyGENE3D1.10.890.20coord: 55..85
e-value: 5.6E-12
score: 47.2
IPR016088Chalcone isomerase, 3-layer sandwichGENE3D3.50.70.10coord: 1..54
e-value: 1.1E-17
score: 66.2
IPR016087Chalcone isomerasePFAMPF02431Chalconecoord: 4..82
e-value: 5.8E-33
score: 114.0
NoneNo IPR availablePANTHERPTHR28039:SF8CHALCONE--FLAVONONE ISOMERASE 1-RELATEDcoord: 4..82
IPR044164Chalcone--flavonone isomerasePANTHERPTHR28039CHALCONE--FLAVONONE ISOMERASE 1-RELATEDcoord: 4..82
IPR036298Chalcone isomerase superfamilySUPERFAMILY54626Chalcone isomerasecoord: 3..82

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G016810.1Lsi02G016810.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009813 flavonoid biosynthetic process
cellular_component GO:0016020 membrane
molecular_function GO:0045430 chalcone isomerase activity
molecular_function GO:0016872 intramolecular lyase activity