Lsi02G015720 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G015720
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	universal stress protein A-like protein
Location	chr02: 21590249 .. 21594733 (+)
RNA-Seq Expression	Lsi02G015720
Synteny	Lsi02G015720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAGAATCGACTGTTTTTTAACCAATATAAAAGCGTTGCAAAAATAAAAGTAAAAAGAAATTATTGTGGGGCTTTCTTTGATGGAAGACAAGAAATTGTGACAGCAGAATCCAGGCGCACCATTAAGCATCGAGAACCGAGAGAGCGCGAGAGAGATCGTTAGAGGAGAGAGAGCTTGTTGCGAAGAAGAAGAGCGACTACAGAGACAACGATGGAGGGAGAACCGACTCGAATAATGCTTGCAGTGAATCAGTCAACCATCAAGGGTTATCCACACCCTTCCATAAGCAGCAAAAGAGCCTTCGAATGGACTCTCCAGAAGATCATCCGCTCCAACACCTCTGGTTTCAAGTTCCTCTTCCTCCATGTCCTAGTGCCTGATGAAGATGGTACCTTCTCCTTTTACTCTCTTCTTCTTTTCTTTATCGTCTCTTTTCCTGATGCTGATCGATCACTATGTGAAATGCGATGTTATTCTGTTAGTTGTTTCCTGTTTTGTGGAATCTGAGCTTCCTTAGATGAACTCCGACCTTTAATTTTATCAATTTTTAGTTATTTTGGAGCAGATAAGCGAGTTCTTGTTTTATAAGTGTTTATAAGGGCATTCACAGTCACGTATTAAGTCTAGAAGGTGTTAAAGTACGGTTTATAAGTCTTTCATGTAATCTATGCCCTAAATTCTTTTCTGCTACCATGCAGTCGTTTTGGCTGATCTGAAATTGTGTAAATTAGTTGATAAGATATCCAGCGACTGCACTGATGGCTGATTTAGATGATTTGCATGTGCACGATGGATTCTCTGTTTTAAAAGTTCTTGAAGTTCCGAATCTACGAATAGGAAAAGCTTCCTCTGTCCTTTTCTTGATGTATTTTTCCTGTTAGATGATTGAGTTTTTATATATTCATTTTCTGGTGGTAATTGATTAAACTACTTTTTCCATCAACATTTTTGGGAGAAATACATGCTTTTTTGTCGTAATATTTGTATTAGGGCATTTGAAAATTTCGAAAAATGTTTTAGGTTAGATAAGAGTAGCTTTTTAAAAAAGCAAAAGTTCTTTAAATTAATAAAAAGACATAACTTATTGTTTTCTTGCAGTATTGCAGCACATGCTTCCTGCTTATATTTCTATTACTGTTGATTATAACTTTATCTACTTCAGATATGGATGTGAGATACAAACGCTTCACACAAGCCATTTTAGATAAGTTTAGAACATGGCCTATCCTATTGGCAATTGGCAGGCTCTTTTGACTTTTGATTTTGTTGGGGAGGGGGGTTCTCTCTACTCCGGCTCTTAGTCTGTTTTTTCCTTTTCTGAATGAAGTTCCTGATATTTCTTATTATTAAAAAAAAAAAAAAATGAGAACATGGCCTTAGCAGAGACGGATTGAATCAATTTTTTTTTTTCAGAAGGAAGGAAGATCAAGTGATTGTTCGATAAACTTGATTTAATAACTAGTCTTTTAGTTTTTTTAAAACAAAGAAACTTAGAAAACTTGTTTTTCTTAGTTTGTTTTCACTGACGATTTGTATTGTAGAGCAATCCTAGTTGTTTTAGTTCTTTAGAAAATATCAGACTTGAACAGTGATTCCAACTGTAGACTAATGCTAATTTTACAATTCACTCAATCACAACTCTATGACATATCTTCTTTAGAATTATACACAAAATTCTGTACAACCACTATATATAATACATGTGAACCGTTGCTATATTTAATTTTAAGTGGACTTGATTCATCTAAGGATGCATCTCTCTCCTACTGTAAAATATGATCAAATGTCCTACAAACAAATAACAGTCACCACGAACAAAAAACTTCTATGTTTAATGTAATCTTCATGTCTTCTCACATAACTTCATTGGATTTATCAAGTAAACTTATCCCTGTCTTATTCTAATCTTTTGCCGTCTGTTTAGTTTCTACAAGGTGTTTATTTATTTCTTAATACTATAAGTTCAAATGTCCTACAAGGCATGTTTAGTCTCTCCTGAGCATGTTTTCTAAGTGCCTAAACATGCTCTGAGTTCTATTGAACTTAAGGACACAACCTGTTACCCTGTTCTAGTAATAAGGTCTCATGGTATTCTCCCATGTTCCAAACATGCCCAAAATTTAAATAATAAAATAATTCACTTTGCTCGATTTAATGTTTGTGCTTCCCTGAGCTTCTTTTGGTTTCTGAATTTGAATTTTCTGCTGTAATTGGATGTTTTTCTTAGAATGAGTTCAGGATGTCTTTTGAGATGGTGAAAAGTGCGTTTAATCCATCATAAGTACTTTTCAAAATTAGTTTTTCGTTTTGATTCTGATTTCCAGTACGAATTCAAAAAAGAACAAAATAAAATATTAGCTTTTCTTGTGTTTATAAAAGCAATTTTAAAAACTCTAAAAGCACAAAAGGAAAAAGAAAAAAAAAACTTTCAATGTTCCTGGTAGGAGGAACACTTGATTAGTATTTATTGTACCCTTTTGGGAGTGTGCTTTAACCTAAAAACATTTTTTTTTCTTCTCCAAAGTCATCCCAAATTCCATGTTATGATAGATAATCAGACACCACACTCACGCTAATTTGATGCATGGGCTTCCTTGAGCTTTGCATTTGGTTTGTGAATGTTTTGGTCATATTTGGATGTTTTGCAGTTAACACTACTACTATACCATAATTATCATAGACCCGCAATTTGAACAAGATGAATTGCCAATTGATAATTTTCTTATATGGTCATATATTGGTCATATATTGGTCATATATATATATATATATATATATATATATATTTATTACTTTTACCCTCTTTGTGAAACTTTTAGTTCATTGACCATTTTTGAGGACGACCATCTCCCACACTGTTCTGCAATAGTTCTCAACATAATGTTTACTGGTTTCTTTAGTAGGTACTATACGATGACTTGAGGAAGTGGATCAATTTTTTTGCAGTATTGATATAATGCTGCTGCACCTCTTGGAACACGTTTAGCTGTTGACCTTCTAGACAACTTTTCCCATCTCTCTGATAATTCTCTTCTTTTTCTTATATAATTACGTTGAGAACTGATGTAGGATGACAGTGTACGATATTTCAAAATGATACTGATTCATATATCATATGTTAGAAAATAACTACTAACCACAACAGTACTCTGCTCATTTGATTTTTTGTAGGTTTTGATGACGTGGATAGTATCTTTGCATCACCTGATGATTTTAAAGAGTTGAAGCAAAGGGACAATGCAAGAGGGCTTCACTTACTGGAGTACTTTGTCACTAGATGTCACGAAATTGGGGTAATGTTATCCATGTTTATACGCTTTTCATGCTAGAGTGATCTGTCAATCTAAATATGTAAATTATACAGTCACCCTTTACATGCTGTTCATATTCCTGAAAAATCAAACAATATTACCGTGTCTGTTTAAACACACAAAAAAGAAGGCAATGTTGGATAAATTGTTTTTCCTTCTTTTTCGATATTTAAACACAGTTGCCATTGTCTTACTTACATGGTTCTTTTGCAAGTTGGTCGTGGTCATTTGTGTTGCAATAATCGTTTGGCAATTTTATAGGTTGCTTGTGAAGCTTGGCTTAAGAAAGGCGGTCCAACTGAAGTAATTTGCCTAGAGGCGAAACGCGTGCAACCTGATTTTCTAGTTGTGGGAAGCAGGGGGCTTGGCCCGTTCAAAAAGTATGCTTCAGTATTATTAGCTCTTCTACATTACTGATTCTCAAGTAGAAAACACATGTTTTCATTTCTTCCAATCTCCGGTCTTAGAGGTCCAGAGCATGTGTTTACTATTTTGACCTTTATGGAATTGAAAACCTAACTGCCAGGGAATTCCTCTTGCGGATGTGTGCAGGGTTTTTGTGGGCACCGTAAGTGAATTCTGTGCAAAACATGCCGAGTGCCCTGTCATTACAATTAAACGCAGGGAGGACGAGACACCCGAAGATCCCGTCGACGACTGACCTTCCAGCTGTTAAAACTAATGACATCTTTGATTTCGTTTGATCCTGTTTATAAATAAGAAACTTTTGGTGAGCGTCTTGTTTATTTAGTGTGCAAAAGTTGCCAATTCGTCAATGATTTGTATTTGTGTTGTGATTCGTTCAAACATACAGCCATTGTTTGTTTAATTGATTGATGATGACCCATTTGGGAATTGGTAAAATCCTTTTAAAACTATTCTCCTTCTCTCTATAAAACAGGTATTTTGTATGGAATTTCACAGGAAATAGACGTTGAAATACAAGTTTATGTAATTTTACAGACCCAATGAAGGAAGAAGAACAAGGCAACAATTTGTCGAATAGCAGCAGAAAACAAGCAAGATTCTAAGTGGGCATATGTCAGAACAACTTCACAGTTCACATCAAGAAAAAATATATATATATGGAAAAATCCGCAAAGACTGAGTAAGTTTCTCTAAAACAAATAAACTCTTGTTTTTCCCTCCACCATTAAACAATGGCGATTTTAG

mRNA sequence

CAAGAATCGACTGTTTTTTAACCAATATAAAAGCGTTGCAAAAATAAAAGTAAAAAGAAATTATTGTGGGGCTTTCTTTGATGGAAGACAAGAAATTGTGACAGCAGAATCCAGGCGCACCATTAAGCATCGAGAACCGAGAGAGCGCGAGAGAGATCGTTAGAGGAGAGAGAGCTTGTTGCGAAGAAGAAGAGCGACTACAGAGACAACGATGGAGGGAGAACCGACTCGAATAATGCTTGCAGTGAATCAGTCAACCATCAAGGGTTATCCACACCCTTCCATAAGCAGCAAAAGAGCCTTCGAATGGACTCTCCAGAAGATCATCCGCTCCAACACCTCTGGTTTCAAGTTCCTCTTCCTCCATGTCCTAGTGCCTGATGAAGATGTATTGCAGCACATGCTTCCTGCTTATATTTCTATTACTGTTGATTATAACTTTATCTACTTCAGATATGGATGTTTTGATGACGTGGATAGTATCTTTGCATCACCTGATGATTTTAAAGAGTTGAAGCAAAGGGACAATGCAAGAGGGCTTCACTTACTGGAGTACTTTGTCACTAGATGTCACGAAATTGGGGTTGCTTGTGAAGCTTGGCTTAAGAAAGGCGGTCCAACTGAAGTAATTTGCCTAGAGGCGAAACGCGTGCAACCTGATTTTCTAGTTGTGGGAAGCAGGGGGCTTGGCCCGTTCAAAAAGGTTTTTGTGGGCACCGTAAGTGAATTCTGTGCAAAACATGCCGAGTGCCCTGTCATTACAATTAAACGCAGGGAGGACGAGACACCCGAAGATCCCGTCGACGACTGACCTTCCAGCTGTTAAAACTAATGACATCTTTGATTTCGTTTGATCCTGTTTATAAATAAGAAACTTTTGACCCAATGAAGGAAGAAGAACAAGGCAACAATTTGTCGAATAGCAGCAGAAAACAAGCAAGATTCTAAGTGGGCATATGTCAGAACAACTTCACAGTTCACATCAAGAAAAAATATATATATATGGAAAAATCCGCAAAGACTGAGTAAGTTTCTCTAAAACAAATAAACTCTTGTTTTTCCCTCCACCATTAAACAATGGCGATTTTAG

Coding sequence (CDS)

ATGGAGGGAGAACCGACTCGAATAATGCTTGCAGTGAATCAGTCAACCATCAAGGGTTATCCACACCCTTCCATAAGCAGCAAAAGAGCCTTCGAATGGACTCTCCAGAAGATCATCCGCTCCAACACCTCTGGTTTCAAGTTCCTCTTCCTCCATGTCCTAGTGCCTGATGAAGATGTATTGCAGCACATGCTTCCTGCTTATATTTCTATTACTGTTGATTATAACTTTATCTACTTCAGATATGGATGTTTTGATGACGTGGATAGTATCTTTGCATCACCTGATGATTTTAAAGAGTTGAAGCAAAGGGACAATGCAAGAGGGCTTCACTTACTGGAGTACTTTGTCACTAGATGTCACGAAATTGGGGTTGCTTGTGAAGCTTGGCTTAAGAAAGGCGGTCCAACTGAAGTAATTTGCCTAGAGGCGAAACGCGTGCAACCTGATTTTCTAGTTGTGGGAAGCAGGGGGCTTGGCCCGTTCAAAAAGGTTTTTGTGGGCACCGTAAGTGAATTCTGTGCAAAACATGCCGAGTGCCCTGTCATTACAATTAAACGCAGGGAGGACGAGACACCCGAAGATCCCGTCGACGACTGA

Protein sequence

MEGEPTRIMLAVNQSTIKGYPHPSISSKRAFEWTLQKIIRSNTSGFKFLFLHVLVPDEDVLQHMLPAYISITVDYNFIYFRYGCFDDVDSIFASPDDFKELKQRDNARGLHLLEYFVTRCHEIGVACEAWLKKGGPTEVICLEAKRVQPDFLVVGSRGLGPFKKVFVGTVSEFCAKHAECPVITIKRREDETPEDPVDD

Homology

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BLAST of Lsi02G015720 vs. ExPASy Swiss-Prot
Match: Q8LGG8 (Universal stress protein A-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g01520 PE=1 SV=2)

HSP 1 Score: 265.0 bits (676), Expect = 6.8e-70
Identity = 127/199 (63.82%), Postives = 148/199 (74.37%), Query Frame = 0


Query: 1   MEGEPTRIMLAVNQSTIKGYPHPSISSKRAFEWTLQKIIRSNTSGFKFLFLHVLVPDEDV 60
           M  EPT++M+AVN STIK YP+PSIS KRAFEWTL+KI+RSNTS FK L LHV V DED 
Sbjct: 1   MGSEPTKVMVAVNASTIKDYPNPSISCKRAFEWTLEKIVRSNTSDFKILLLHVQVVDED- 60

Query: 61  LQHMLPAYISITVDYNFIYFRYGCFDDVDSIFASPDDFKELKQRDNARGLHLLEYFVTRC 120
                                   FDDVDSI+ASP+DF++++Q + A+GLHLLE+FV +C
Sbjct: 61  -----------------------GFDDVDSIYASPEDFRDMRQSNKAKGLHLLEFFVNKC 120

Query: 121 HEIGVACEAWLKKGGPTEVICLEAKRVQPDFLVVGSRGLGPFKKVFVGTVSEFCAKHAEC 180
           HEIGV CEAW+K G P +VIC E KRV+PDFLVVGSRGLG F+KVFVGTVS FC KHAEC
Sbjct: 121 HEIGVGCEAWIKTGDPKDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAEC 175

Query: 181 PVITIKRREDETPEDPVDD 200
           PV+TIKR  DETP DP DD
Sbjct: 181 PVMTIKRNADETPSDPADD 175

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BLAST of Lsi02G015720 vs. ExPASy Swiss-Prot
Match: P74148 (Universal stress protein Sll1388 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll1388 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.2e-07
Identity = 30/88 (34.09%), Postives = 44/88 (50.00%), Query Frame = 0


Query: 99  KELKQRDNARGLHLLEYFVTRCHEIGVACEAWLKKGGPTEVICLEAKRVQPDFLVVGSRG 158
           KE  +         L+  V +  E GVACE  +K G P   I   AK    D +V+G RG
Sbjct: 66  KEHLEEQQTEAREWLQSIVQQVQEDGVACEWDVKVGEPGRWIRDMAKNWDADLVVLGRRG 125

Query: 159 LGPFKKVFVGTVSEFCAKHAECPVITIK 187
           L    +VF+G+VS +   H +C V+ ++
Sbjct: 126 LKGLAEVFLGSVSSYVIHHVQCSVLIVQ 153

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BLAST of Lsi02G015720 vs. ExPASy Swiss-Prot
Match: P42297 (Universal stress protein YxiE OS=Bacillus subtilis (strain 168) OX=224308 GN=yxiE PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.8e-06
Identity = 29/93 (31.18%), Postives = 46/93 (49.46%), Query Frame = 0


Query: 95  PDDF-KELKQRDNARGLHLLEYFVTRCHEIGVACEAWLKKGGPTEVICLEAKRVQPDFLV 154
           P+ F  E++      GL +LE    +  E GV  E     G P   I   AK      +V
Sbjct: 56  PEHFIDEIRNEVKKEGLKILENAKEKAAEKGVQAETIYANGEPAHEILNHAKEKGVSLIV 115

Query: 155 VGSRGLGPFKKVFVGTVSEFCAKHAECPVITIK 187
           VGSRG+   K++ +G+VS   ++ + CPV+ ++
Sbjct: 116 VGSRGISGLKEMMLGSVSHKVSQLSTCPVLIVR 148

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BLAST of Lsi02G015720 vs. ExPASy Swiss-Prot
Match: Q8L4N1 (Universal stress protein PHOS34 OS=Arabidopsis thaliana OX=3702 GN=PHOS34 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.8e-04
Identity = 21/62 (33.87%), Postives = 36/62 (58.06%), Query Frame = 0


Query: 138 EVICLEAKRVQPDFLVVGSRGLGPFKKVF---VGTVSEFCAKHAECPVITIKRREDETPE 197
           E +CLE +R+    +++GSRG G  K+     +G+VS++C  H  CPV+ ++  +D    
Sbjct: 153 ERLCLETERLNLSAVIMGSRGFGAEKRGSDGKLGSVSDYCVHHCVCPVVVVRYPDDRDGP 212

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BLAST of Lsi02G015720 vs. ExPASy TrEMBL
Match: A0A1S3C9W4 (universal stress protein A-like protein OS=Cucumis melo OX=3656 GN=LOC103498079 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 5.8e-88
Identity = 165/199 (82.91%), Postives = 169/199 (84.92%), Query Frame = 0


Query: 1   MEGEPTRIMLAVNQSTIKGYPHPSISSKRAFEWTLQKIIRSNTSGFKFLFLHVLVPDEDV 60
           ME EPTRIMLAVNQSTIKGYPHPSISSKRAFEWTLQKI+RSNTSGFKFLFLHVLVPDED 
Sbjct: 1   MEEEPTRIMLAVNQSTIKGYPHPSISSKRAFEWTLQKIVRSNTSGFKFLFLHVLVPDED- 60

Query: 61  LQHMLPAYISITVDYNFIYFRYGCFDDVDSIFASPDDFKELKQRDNARGLHLLEYFVTRC 120
                                   FD+VDSIFASPDDFKELK+RDNARGLHLLEYFV RC
Sbjct: 61  -----------------------GFDEVDSIFASPDDFKELKKRDNARGLHLLEYFVNRC 120

Query: 121 HEIGVACEAWLKKGGPTEVICLEAKRVQPDFLVVGSRGLGPFKKVFVGTVSEFCAKHAEC 180
           HEIGVACEAWLKKG PTEVICLE KRV PDFLVVGSRGLGPFKKVFVGTVSEFCAKHAEC
Sbjct: 121 HEIGVACEAWLKKGDPTEVICLEVKRVLPDFLVVGSRGLGPFKKVFVGTVSEFCAKHAEC 175

Query: 181 PVITIKRREDETPEDPVDD 200
           PVITIKRREDETP+DPVDD
Sbjct: 181 PVITIKRREDETPDDPVDD 175

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BLAST of Lsi02G015720 vs. ExPASy TrEMBL
Match: A0A0A0KP43 (Usp domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G524760 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 6.4e-87
Identity = 163/199 (81.91%), Postives = 169/199 (84.92%), Query Frame = 0


Query: 1   MEGEPTRIMLAVNQSTIKGYPHPSISSKRAFEWTLQKIIRSNTSGFKFLFLHVLVPDEDV 60
           ME  PTRIMLAVNQSTIKGYPHPSISSKRAFEWTLQKI+RSNTSGF+FLFLHVLVPDED 
Sbjct: 1   MEEGPTRIMLAVNQSTIKGYPHPSISSKRAFEWTLQKIVRSNTSGFRFLFLHVLVPDED- 60

Query: 61  LQHMLPAYISITVDYNFIYFRYGCFDDVDSIFASPDDFKELKQRDNARGLHLLEYFVTRC 120
                                   FD+VDSIFASPDDFKELK+RDNARGLHLLEYFVTRC
Sbjct: 61  -----------------------GFDEVDSIFASPDDFKELKKRDNARGLHLLEYFVTRC 120

Query: 121 HEIGVACEAWLKKGGPTEVICLEAKRVQPDFLVVGSRGLGPFKKVFVGTVSEFCAKHAEC 180
           HEIGVA EAWLKKG PTEVICLE KR+QPDFLVVGSRGLGPFKKVFVGTVSEFCAKHAEC
Sbjct: 121 HEIGVASEAWLKKGDPTEVICLEVKRIQPDFLVVGSRGLGPFKKVFVGTVSEFCAKHAEC 175

Query: 181 PVITIKRREDETPEDPVDD 200
           PVITIKRREDETP+DPVDD
Sbjct: 181 PVITIKRREDETPDDPVDD 175

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BLAST of Lsi02G015720 vs. ExPASy TrEMBL
Match: A0A6J1JLH1 (universal stress protein A-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486957 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 9.5e-83
Identity = 157/199 (78.89%), Postives = 163/199 (81.91%), Query Frame = 0


Query: 1   MEGEPTRIMLAVNQSTIKGYPHPSISSKRAFEWTLQKIIRSNTSGFKFLFLHVLVPDEDV 60
           MEGEPTRIMLAVNQSTIKGYPH SISS RAFEWTLQKI+RSNTSGFKFLFLHV VPDED 
Sbjct: 1   MEGEPTRIMLAVNQSTIKGYPHASISSSRAFEWTLQKIVRSNTSGFKFLFLHVQVPDED- 60

Query: 61  LQHMLPAYISITVDYNFIYFRYGCFDDVDSIFASPDDFKELKQRDNARGLHLLEYFVTRC 120
                                   FDDVDSIFASPDDFK+LKQRDNARGL LLE+FV RC
Sbjct: 61  -----------------------GFDDVDSIFASPDDFKDLKQRDNARGLQLLEFFVNRC 120

Query: 121 HEIGVACEAWLKKGGPTEVICLEAKRVQPDFLVVGSRGLGPFKKVFVGTVSEFCAKHAEC 180
           HEIGVACEAWLKKG PTEVICLE KRVQPDFLVVGSRG+G FK+VFVGTVSEFCAKHAEC
Sbjct: 121 HEIGVACEAWLKKGDPTEVICLEVKRVQPDFLVVGSRGIGRFKRVFVGTVSEFCAKHAEC 175

Query: 181 PVITIKRREDETPEDPVDD 200
           PVIT+KR  DETPED VDD
Sbjct: 181 PVITVKRTVDETPEDHVDD 175

[Close]

BLAST of Lsi02G015720 vs. ExPASy TrEMBL
Match: A0A6J1H737 (universal stress protein A-like protein OS=Cucurbita moschata OX=3662 GN=LOC111461085 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.7e-82
Identity = 156/199 (78.39%), Postives = 162/199 (81.41%), Query Frame = 0


Query: 1   MEGEPTRIMLAVNQSTIKGYPHPSISSKRAFEWTLQKIIRSNTSGFKFLFLHVLVPDEDV 60
           MEGEPTRIMLAVNQSTIKGYPH SISS RAFEWTLQKI+RSNTSGFKFLFLHV VPDED 
Sbjct: 1   MEGEPTRIMLAVNQSTIKGYPHASISSSRAFEWTLQKIVRSNTSGFKFLFLHVQVPDED- 60

Query: 61  LQHMLPAYISITVDYNFIYFRYGCFDDVDSIFASPDDFKELKQRDNARGLHLLEYFVTRC 120
                                   FDDVDSIFASPDDFK+LKQRDNARGL LLE+FV RC
Sbjct: 61  -----------------------GFDDVDSIFASPDDFKDLKQRDNARGLQLLEFFVNRC 120

Query: 121 HEIGVACEAWLKKGGPTEVICLEAKRVQPDFLVVGSRGLGPFKKVFVGTVSEFCAKHAEC 180
           HEIGVACEAWLKKG PTEVIC E KRVQPDFLVVGSRG+G FK+VFVGTVSEFCAKHAEC
Sbjct: 121 HEIGVACEAWLKKGDPTEVICHEVKRVQPDFLVVGSRGIGRFKRVFVGTVSEFCAKHAEC 175

Query: 181 PVITIKRREDETPEDPVDD 200
           PVIT+KR  DETPED VDD
Sbjct: 181 PVITVKRTVDETPEDQVDD 175

[Close]

BLAST of Lsi02G015720 vs. ExPASy TrEMBL
Match: A0A6J1BX18 (universal stress protein A-like protein OS=Momordica charantia OX=3673 GN=LOC111006432 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.3e-81
Identity = 153/199 (76.88%), Postives = 161/199 (80.90%), Query Frame = 0


Query: 1   MEGEPTRIMLAVNQSTIKGYPHPSISSKRAFEWTLQKIIRSNTSGFKFLFLHVLVPDEDV 60
           MEGEPTRIMLAVNQSTIKGYPH SISS RAF+WTL KI+RSNTSGFK LFLHV +PDED 
Sbjct: 1   MEGEPTRIMLAVNQSTIKGYPHASISSTRAFQWTLHKIVRSNTSGFKLLFLHVQIPDED- 60

Query: 61  LQHMLPAYISITVDYNFIYFRYGCFDDVDSIFASPDDFKELKQRDNARGLHLLEYFVTRC 120
                                   FDDVDSIFASPDDFK+LK R+ ARGL LLE+FV RC
Sbjct: 61  -----------------------AFDDVDSIFASPDDFKDLKHRERARGLLLLEFFVNRC 120

Query: 121 HEIGVACEAWLKKGGPTEVICLEAKRVQPDFLVVGSRGLGPFKKVFVGTVSEFCAKHAEC 180
           HEIGV CEAWLKKG PTEVICLEAKRV+PDFLVVGSRGLGPFK+VFVGTVSEFC KHAEC
Sbjct: 121 HEIGVGCEAWLKKGDPTEVICLEAKRVRPDFLVVGSRGLGPFKRVFVGTVSEFCVKHAEC 175

Query: 181 PVITIKRREDETPEDPVDD 200
           PVITIKR EDETPEDPVDD
Sbjct: 181 PVITIKRGEDETPEDPVDD 175

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BLAST of Lsi02G015720 vs. NCBI nr
Match: XP_038890577.1 (universal stress protein A-like protein [Benincasa hispida])

HSP 1 Score: 341.7 bits (875), Expect = 4.4e-90
Identity = 169/199 (84.92%), Postives = 172/199 (86.43%), Query Frame = 0


Query: 1   MEGEPTRIMLAVNQSTIKGYPHPSISSKRAFEWTLQKIIRSNTSGFKFLFLHVLVPDEDV 60
           MEGE TRIM+AVNQSTIKGYPHPSISSKRAFEWTLQKI+RSNTSGFKFLFLHVLVPDED 
Sbjct: 1   MEGEQTRIMVAVNQSTIKGYPHPSISSKRAFEWTLQKIVRSNTSGFKFLFLHVLVPDED- 60

Query: 61  LQHMLPAYISITVDYNFIYFRYGCFDDVDSIFASPDDFKELKQRDNARGLHLLEYFVTRC 120
                                   FDDVDSIFASPDDFKELKQRDNARGLHLLEYFVTRC
Sbjct: 61  -----------------------GFDDVDSIFASPDDFKELKQRDNARGLHLLEYFVTRC 120

Query: 121 HEIGVACEAWLKKGGPTEVICLEAKRVQPDFLVVGSRGLGPFKKVFVGTVSEFCAKHAEC 180
           HEIGVACE+WLKKG PTEVICLEAKRVQPDFLVVGSRGLGPFKKVFVGTVSEFCAKHAEC
Sbjct: 121 HEIGVACESWLKKGDPTEVICLEAKRVQPDFLVVGSRGLGPFKKVFVGTVSEFCAKHAEC 175

Query: 181 PVITIKRREDETPEDPVDD 200
           PVITIKRREDETPEDPVDD
Sbjct: 181 PVITIKRREDETPEDPVDD 175

[Close]

BLAST of Lsi02G015720 vs. NCBI nr
Match: XP_008458777.1 (PREDICTED: universal stress protein A-like protein [Cucumis melo])

HSP 1 Score: 333.6 bits (854), Expect = 1.2e-87
Identity = 165/199 (82.91%), Postives = 169/199 (84.92%), Query Frame = 0


Query: 1   MEGEPTRIMLAVNQSTIKGYPHPSISSKRAFEWTLQKIIRSNTSGFKFLFLHVLVPDEDV 60
           ME EPTRIMLAVNQSTIKGYPHPSISSKRAFEWTLQKI+RSNTSGFKFLFLHVLVPDED 
Sbjct: 1   MEEEPTRIMLAVNQSTIKGYPHPSISSKRAFEWTLQKIVRSNTSGFKFLFLHVLVPDED- 60

Query: 61  LQHMLPAYISITVDYNFIYFRYGCFDDVDSIFASPDDFKELKQRDNARGLHLLEYFVTRC 120
                                   FD+VDSIFASPDDFKELK+RDNARGLHLLEYFV RC
Sbjct: 61  -----------------------GFDEVDSIFASPDDFKELKKRDNARGLHLLEYFVNRC 120

Query: 121 HEIGVACEAWLKKGGPTEVICLEAKRVQPDFLVVGSRGLGPFKKVFVGTVSEFCAKHAEC 180
           HEIGVACEAWLKKG PTEVICLE KRV PDFLVVGSRGLGPFKKVFVGTVSEFCAKHAEC
Sbjct: 121 HEIGVACEAWLKKGDPTEVICLEVKRVLPDFLVVGSRGLGPFKKVFVGTVSEFCAKHAEC 175

Query: 181 PVITIKRREDETPEDPVDD 200
           PVITIKRREDETP+DPVDD
Sbjct: 181 PVITIKRREDETPDDPVDD 175

[Close]

BLAST of Lsi02G015720 vs. NCBI nr
Match: XP_004142799.1 (universal stress protein A-like protein [Cucumis sativus] >KGN51383.1 hypothetical protein Csa_009188 [Cucumis sativus])

HSP 1 Score: 330.1 bits (845), Expect = 1.3e-86
Identity = 163/199 (81.91%), Postives = 169/199 (84.92%), Query Frame = 0


Query: 1   MEGEPTRIMLAVNQSTIKGYPHPSISSKRAFEWTLQKIIRSNTSGFKFLFLHVLVPDEDV 60
           ME  PTRIMLAVNQSTIKGYPHPSISSKRAFEWTLQKI+RSNTSGF+FLFLHVLVPDED 
Sbjct: 1   MEEGPTRIMLAVNQSTIKGYPHPSISSKRAFEWTLQKIVRSNTSGFRFLFLHVLVPDED- 60

Query: 61  LQHMLPAYISITVDYNFIYFRYGCFDDVDSIFASPDDFKELKQRDNARGLHLLEYFVTRC 120
                                   FD+VDSIFASPDDFKELK+RDNARGLHLLEYFVTRC
Sbjct: 61  -----------------------GFDEVDSIFASPDDFKELKKRDNARGLHLLEYFVTRC 120

Query: 121 HEIGVACEAWLKKGGPTEVICLEAKRVQPDFLVVGSRGLGPFKKVFVGTVSEFCAKHAEC 180
           HEIGVA EAWLKKG PTEVICLE KR+QPDFLVVGSRGLGPFKKVFVGTVSEFCAKHAEC
Sbjct: 121 HEIGVASEAWLKKGDPTEVICLEVKRIQPDFLVVGSRGLGPFKKVFVGTVSEFCAKHAEC 175

Query: 181 PVITIKRREDETPEDPVDD 200
           PVITIKRREDETP+DPVDD
Sbjct: 181 PVITIKRREDETPDDPVDD 175

[Close]

BLAST of Lsi02G015720 vs. NCBI nr
Match: XP_022989906.1 (universal stress protein A-like protein [Cucurbita maxima])

HSP 1 Score: 316.2 bits (809), Expect = 2.0e-82
Identity = 157/199 (78.89%), Postives = 163/199 (81.91%), Query Frame = 0


Query: 1   MEGEPTRIMLAVNQSTIKGYPHPSISSKRAFEWTLQKIIRSNTSGFKFLFLHVLVPDEDV 60
           MEGEPTRIMLAVNQSTIKGYPH SISS RAFEWTLQKI+RSNTSGFKFLFLHV VPDED 
Sbjct: 1   MEGEPTRIMLAVNQSTIKGYPHASISSSRAFEWTLQKIVRSNTSGFKFLFLHVQVPDED- 60

Query: 61  LQHMLPAYISITVDYNFIYFRYGCFDDVDSIFASPDDFKELKQRDNARGLHLLEYFVTRC 120
                                   FDDVDSIFASPDDFK+LKQRDNARGL LLE+FV RC
Sbjct: 61  -----------------------GFDDVDSIFASPDDFKDLKQRDNARGLQLLEFFVNRC 120

Query: 121 HEIGVACEAWLKKGGPTEVICLEAKRVQPDFLVVGSRGLGPFKKVFVGTVSEFCAKHAEC 180
           HEIGVACEAWLKKG PTEVICLE KRVQPDFLVVGSRG+G FK+VFVGTVSEFCAKHAEC
Sbjct: 121 HEIGVACEAWLKKGDPTEVICLEVKRVQPDFLVVGSRGIGRFKRVFVGTVSEFCAKHAEC 175

Query: 181 PVITIKRREDETPEDPVDD 200
           PVIT+KR  DETPED VDD
Sbjct: 181 PVITVKRTVDETPEDHVDD 175

[Close]

BLAST of Lsi02G015720 vs. NCBI nr
Match: XP_023536546.1 (universal stress protein A-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315.1 bits (806), Expect = 4.4e-82
Identity = 156/199 (78.39%), Postives = 163/199 (81.91%), Query Frame = 0


Query: 1   MEGEPTRIMLAVNQSTIKGYPHPSISSKRAFEWTLQKIIRSNTSGFKFLFLHVLVPDEDV 60
           MEGEPTRIMLAVNQSTIKGYPH SISS RAFEWTLQKI+RSNTSGFKFLFLHV VPDED 
Sbjct: 1   MEGEPTRIMLAVNQSTIKGYPHASISSSRAFEWTLQKIVRSNTSGFKFLFLHVQVPDED- 60

Query: 61  LQHMLPAYISITVDYNFIYFRYGCFDDVDSIFASPDDFKELKQRDNARGLHLLEYFVTRC 120
                                   FDDVDSIFASPDDFK+LKQRDNARGL LLE+FV RC
Sbjct: 61  -----------------------GFDDVDSIFASPDDFKDLKQRDNARGLQLLEFFVNRC 120

Query: 121 HEIGVACEAWLKKGGPTEVICLEAKRVQPDFLVVGSRGLGPFKKVFVGTVSEFCAKHAEC 180
           HEIGVACEAWLKKG PTEVICLE KRVQPDFLVVGSRG+G FK+VFVGTVSEFCAKHAEC
Sbjct: 121 HEIGVACEAWLKKGDPTEVICLEVKRVQPDFLVVGSRGIGRFKRVFVGTVSEFCAKHAEC 175

Query: 181 PVITIKRREDETPEDPVDD 200
           PVIT+KR  DETPED V+D
Sbjct: 181 PVITVKRTVDETPEDQVED 175

[Close]

BLAST of Lsi02G015720 vs. TAIR 10
Match: AT5G14680.1 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 281.2 bits (718), Expect = 6.5e-76
Identity = 130/199 (65.33%), Postives = 158/199 (79.40%), Query Frame = 0


Query: 1   MEGEPTRIMLAVNQSTIKGYPHPSISSKRAFEWTLQKIIRSNTSGFKFLFLHVLVPDEDV 60
           ME EPTR+M+AVN+ST+KGYPH SISSK+AFEWTL+KI+RSNTSGFK L LHV V DED 
Sbjct: 1   MESEPTRVMVAVNESTLKGYPHASISSKKAFEWTLKKIVRSNTSGFKLLLLHVQVQDED- 60

Query: 61  LQHMLPAYISITVDYNFIYFRYGCFDDVDSIFASPDDFKELKQRDNARGLHLLEYFVTRC 120
                                   FDD+DSI+ASPDDF+++++R+ A+GLHLLE+FV +C
Sbjct: 61  -----------------------GFDDMDSIYASPDDFRQMRERNKAKGLHLLEFFVKKC 120

Query: 121 HEIGVACEAWLKKGGPTEVICLEAKRVQPDFLVVGSRGLGPFKKVFVGTVSEFCAKHAEC 180
           H+IGV CEAW++KG PTE+IC E +RV+PDFLVVGSRGLGPF+KVFVGTVSEFC KHAEC
Sbjct: 121 HDIGVGCEAWIRKGDPTELICHEVRRVRPDFLVVGSRGLGPFQKVFVGTVSEFCVKHAEC 175

Query: 181 PVITIKRREDETPEDPVDD 200
           PVITIKR  +E+P+DP DD
Sbjct: 181 PVITIKRTAEESPQDPADD 175

[Close]

BLAST of Lsi02G015720 vs. TAIR 10
Match: AT3G01520.1 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 265.0 bits (676), Expect = 4.9e-71
Identity = 127/199 (63.82%), Postives = 148/199 (74.37%), Query Frame = 0


Query: 1   MEGEPTRIMLAVNQSTIKGYPHPSISSKRAFEWTLQKIIRSNTSGFKFLFLHVLVPDEDV 60
           M  EPT++M+AVN STIK YP+PSIS KRAFEWTL+KI+RSNTS FK L LHV V DED 
Sbjct: 1   MGSEPTKVMVAVNASTIKDYPNPSISCKRAFEWTLEKIVRSNTSDFKILLLHVQVVDED- 60

Query: 61  LQHMLPAYISITVDYNFIYFRYGCFDDVDSIFASPDDFKELKQRDNARGLHLLEYFVTRC 120
                                   FDDVDSI+ASP+DF++++Q + A+GLHLLE+FV +C
Sbjct: 61  -----------------------GFDDVDSIYASPEDFRDMRQSNKAKGLHLLEFFVNKC 120

Query: 121 HEIGVACEAWLKKGGPTEVICLEAKRVQPDFLVVGSRGLGPFKKVFVGTVSEFCAKHAEC 180
           HEIGV CEAW+K G P +VIC E KRV+PDFLVVGSRGLG F+KVFVGTVS FC KHAEC
Sbjct: 121 HEIGVGCEAWIKTGDPKDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAEC 175

Query: 181 PVITIKRREDETPEDPVDD 200
           PV+TIKR  DETP DP DD
Sbjct: 181 PVMTIKRNADETPSDPADD 175

[Close]

BLAST of Lsi02G015720 vs. TAIR 10
Match: AT1G68300.1 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 78.2 bits (191), Expect = 8.4e-15
Identity = 49/183 (26.78%), Postives = 86/183 (46.99%), Query Frame = 0


Query: 7   RIMLAVNQSTIKGYPHPSISSKRAFEWTLQKIIRSNTSGFKFLFLHVLVPDEDVLQHMLP 66
           ++M+A+++S           SKRA +WTL             ++L   + D D++     
Sbjct: 11  QVMVAIDESE---------CSKRALQWTL-------------VYLKDSLADSDIILFTAQ 70

Query: 67  AYISITVDYNFIYFRYGCFDDVDSIFASPDD-FKELKQRDNARGLHLLEYFVTRCHEIGV 126
            ++ ++  Y              S  A+P +    L++     GL+ L+     C E GV
Sbjct: 71  PHLDLSCVY------------ASSYGAAPIELINSLQESHKNAGLNRLDEGTKICAETGV 130

Query: 127 ACEAWLKKGGPTEVICLEAKRVQPDFLVVGSRGLGPFKKVFVGTVSEFCAKHAECPVITI 186
                L+ G P E IC  A+++  D LVVGS G G  ++ F+G+VS +C  +A+CPV+ +
Sbjct: 131 TPRKVLEFGNPKEAICEAAEKLGVDMLVVGSHGKGALQRTFLGSVSNYCVNNAKCPVLVV 159

Query: 187 KRR 189
           + +
Sbjct: 191 RTK 159

[Close]

BLAST of Lsi02G015720 vs. TAIR 10
Match: AT3G11930.1 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-14
Identity = 34/103 (33.01%), Postives = 58/103 (56.31%), Query Frame = 0


Query: 90  SIFASPDDFKELKQRDNARGLHLLEYFVTRCHEIGVACEAWLKKGGPTEVICLEAKRVQP 149
           +++AS    + +K+        LL   +  C    +  E  + +G   E+IC   +++  
Sbjct: 96  TVYASSSMIESVKKAQQETSAALLSRALQMCRAKQIRTETLVLEGEAKEMICEAVEKMHV 155

Query: 150 DFLVVGSRGLGPFKKVFVGTVSEFCAKHAECPVITIKRREDET 193
           D LVVGSRGLG  K+ F+G+VS++CA HA CP++ +K  ++ T
Sbjct: 156 DLLVVGSRGLGKIKRAFLGSVSDYCAHHANCPILIVKPPKEMT 198

[Close]

BLAST of Lsi02G015720 vs. TAIR 10
Match: AT3G11930.2 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-14
Identity = 34/103 (33.01%), Postives = 58/103 (56.31%), Query Frame = 0


Query: 90  SIFASPDDFKELKQRDNARGLHLLEYFVTRCHEIGVACEAWLKKGGPTEVICLEAKRVQP 149
           +++AS    + +K+        LL   +  C    +  E  + +G   E+IC   +++  
Sbjct: 97  AVYASSSMIESVKKAQQETSAALLSRALQMCRAKQIRTETLVLEGEAKEMICEAVEKMHV 156

Query: 150 DFLVVGSRGLGPFKKVFVGTVSEFCAKHAECPVITIKRREDET 193
           D LVVGSRGLG  K+ F+G+VS++CA HA CP++ +K  ++ T
Sbjct: 157 DLLVVGSRGLGKIKRAFLGSVSDYCAHHANCPILIVKPPKEMT 199

The following BLAST results are available for this feature:

BLAST of Lsi02G015720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LGG8	6.8e-70	63.82	Universal stress protein A-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g0...	[more]
P74148	2.2e-07	34.09	Universal stress protein Sll1388 OS=Synechocystis sp. (strain PCC 6803 / Kazusa)...	[more]
P42297	1.8e-06	31.18	Universal stress protein YxiE OS=Bacillus subtilis (strain 168) OX=224308 GN=yxi...	[more]
Q8L4N1	3.8e-04	33.87	Universal stress protein PHOS34 OS=Arabidopsis thaliana OX=3702 GN=PHOS34 PE=1 S...	[more]

BLAST of Lsi02G015720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C9W4	5.8e-88	82.91	universal stress protein A-like protein OS=Cucumis melo OX=3656 GN=LOC103498079 ...	[more]
A0A0A0KP43	6.4e-87	81.91	Usp domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G524760 PE=4 SV...	[more]
A0A6J1JLH1	9.5e-83	78.89	universal stress protein A-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486...	[more]
A0A6J1H737	4.7e-82	78.39	universal stress protein A-like protein OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1BX18	2.3e-81	76.88	universal stress protein A-like protein OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of Lsi02G015720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890577.1	4.4e-90	84.92	universal stress protein A-like protein [Benincasa hispida]	[more]
XP_008458777.1	1.2e-87	82.91	PREDICTED: universal stress protein A-like protein [Cucumis melo]	[more]
XP_004142799.1	1.3e-86	81.91	universal stress protein A-like protein [Cucumis sativus] >KGN51383.1 hypothetic...	[more]
XP_022989906.1	2.0e-82	78.89	universal stress protein A-like protein [Cucurbita maxima]	[more]
XP_023536546.1	4.4e-82	78.39	universal stress protein A-like protein [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi02G015720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14680.1	6.5e-76	65.33	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT3G01520.1	4.9e-71	63.82	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT1G68300.1	8.4e-15	26.78	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT3G11930.1	1.1e-14	33.01	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT3G11930.2	1.1e-14	33.01	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006015	Universal stress protein A family	PRINTS	PR01438	UNVRSLSTRESS	coord: 146..158 score: 36.31 coord: 164..186 score: 28.87
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620	HUPs	coord: 2..199 e-value: 2.7E-62 score: 212.1
IPR006016	UspA	PFAM	PF00582	Usp	coord: 116..186 e-value: 6.8E-15 score: 55.8
IPR044187	Universal stress protein A-like protein, plant	PANTHER	PTHR47710	ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN	coord: 85..199 coord: 1..70
None	No IPR available	CDD	cd00293	USP_Like	coord: 7..183 e-value: 2.94406E-19 score: 77.7954
None	No IPR available	SUPERFAMILY	52402	Adenine nucleotide alpha hydrolases-like	coord: 6..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G015720.1	Lsi02G015720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016208	AMP binding