Lsi02G014930 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G014930
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Binding partner of ACD11 1-like
Location	chr02: 20757011 .. 20760564 (+)
RNA-Seq Expression	Lsi02G014930
Synteny	Lsi02G014930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTCCCCCGGCCCCCTCTCCTCTTCTTCTCTCTGAGCTTCAAACAGGTACGCCATCACAAAATTTTCCGTTAACTATTTACCTCTTGTTTTAATTTTCATGTCTTTCATTTCAATTTCTCTGTTTCTATCTCTTCCTTTGATTGTTTTGGCTAATGGGTTTGTTTTAGGTTTCCATTTCAAGATCTGGGTTGTGGATTAACTTTGAGAATCTCTTTAAATTTTTCATCTTTTTGTGTAATGGACTTGCTCTTGCTTGTAATTTCCCCCTTTTCTACATACCCTTTTGCTTAAATGTTCTGGGAATCTCTCATTCTTTCGTTTTTCTTCACTTTTCCCCAATGTTCATATTCTTTCCCTCTAACCAGCTGCATTGCTCTTACCATAGAGACTTAGGTTTATAGTGGATATATAAGAATTCACAATTGTATATATTTATCTTAATCTAGAAGCAACACTTTTGGGATAAGCCTGCAAGTGGTAAATTATAACTTTGGACCATTAATTATTATTATGGATGTCAGAGTCATCATACACCAAGTTGGAACATTCTTGTTTGGGGGTAAAAGGTGCTAAAAAGAAAAGAGAAAAGGCTTATTTTTATGAATATGAAGTGTAGGGTTAATTGGTATTTCAGTTTTCTCTAAACCAGCTGGTGAAAGACTGTTTTGTTTTGTTTTGGTATCAAACTCCCCAGGTATTGTGCTCCAATTCAAGTTTTCAACATAGAAAAAGCTGTGCGAAACAATGTACAGTGGGGATTATACTGCTGAAGTTACAAGCTTATCACCTAAAGCCACAGAGAATGATGTTTATGATTTTTTCTCTCATTGTGGCGCGGTAGAGCACGTAGAAATCCTCAGGTGAATAAAACATAAATCCCCTGGCTTGATCGTTTGTTACAATTTCTAATCAATCATATGTGAACCTATTACCATTAGCTTGTTATGCATAAATTAAGAGCTTTGAAACAATTTATATCTGTATGCTAATGTCTGCTGCCCCCCACCCCATTGGAAAGAACCAGTTTCAGTTTCATCAACTCCGACGAGAAGGGTCTCTGTCTCATCATAGATTTACACCGAATTATGAGATCTTACATAAGAACTTACTGAAGCTTCAATAATCAATAAATAAACTTGAAAGATATGAATTTCATATTCATTATTGCTGTTGTGATTAGTAGTTAAAAGAAGAGTGAACTTTTCAGAAATGCTAAAGAGAGTAAACTGGACTGATGATGAGTCTGCCTATGAATTTAGTATGCTGCAATTTTCAATTAGCTGTAAAACCAAGCTACTTGAAAATGTTTTCTCTTTTGGGATAACAGATCAGGCGATTATGCATGTACTGCTTATGTGACCTTTCGAGATGCTTTTGCCCTGGAAACTGCTATATTGCTTAGTGTAAGTTCTTGAGGATCATTTGATTATGGTTGACTTAAGATGCTTCTGTGCTCCTTCATTTTGTAATCATAAATTTGTGTAGAGTACTTTCCTTTTGTTTCTGCTCGCTTGTATGTGTTTCGATGATGTATGTAAACACACAAATACACTCTTTAGGGTGAGTGTATGTAAACACACAAATACACTCTTTAGGGTGAGTGGATGAGGAGGAGATGACCTTTGCGGAAGGATGACGTGCATAAATCGAGAAATGGTTCAAATTCTAGGCTTGAGAAGTTACCATTTCATTTTTAGAGTCTTTCAATTTCTTGCTTTTAAAGAAAGTTGTGTAGATGCCCTCTTTGTTCCTTTCTTTTTCAACATATTTGAGACTCTTCTGTGCTCTTTCATTTTGCAATGGCTTGCTTCTCTCCTTTTTACTTTATCAATCATAGATTCGTGTAGAGTACTTTCTTTTTGTTTCTGCTAGCTTGCGTGGGGTTCGATGATGTATGTGAACACACAAATACACTCTTTAGGGTGAGTGGATGAGGACGGGATGGCTTTTGCGGAAGGATGATGTGTACAAATCGACAAAATGGTTTGAATCCTAGGTTTGAGACGTTACAATTTCATTTTTGGAGTCTATCAATCTCTTGCTTTTAAAGAAGGTTTTGTACATGCCTCTCTGTTTCTTTTTTTTTCAACATGTTTGAGTTTCTCCAACTTACTCAATATGCAATTACTTAAATTTGCCAGAGTTTGAGGGAAAATCATTTGAATCACTTTCCATTTGTACTTTCTAGCATTCCCATGAGCCATGACTAATGGATATTTGTTCTTGCAATTCTTATGATTCAGTTCATCGTTTAATAATGTCAAATAAGTCTTTCTAAGTTTGAGATGGTCCCTCCTTACATCTTAGGGGCTTGGTTTGAAACTCTGAATCCACATTTCATTTCTTTAAAAGAAAATAAAAAATTATGTGTTCTCTCGAAACAAGCGCCTACACGTAACCATCAAAATTAATTATCTTTAAACATCTCTTTTGATCTTTCATATTGGAGTTCATTTGCTGATTTTGATATTCCAGGGGGCCGAAATCCTAGATCAATGTGTGTTCATATCGCGGTGGGGAACTTACGTAGATGAATCAGACACTTGGAACAGCCATTCACAAATGACCGATGACAATACAAGCTTAATGGTAAGCGTAAATAAATAGGTACTCGTTGTTCAAAGGTATCGACATGTCATAACTCATCCCGAGCCTAGCTACTCGCTAAATCTTGCTTGGTTGGTCTTCTAGTTTGTACACAATATCTTGAATTGATCTCTTTAAGTTTCTTTATGGAAATCAGGTGACAGAAATAATGCATTCTGTTCACACACCAGGGGAGGCTGTAACTATGGCTCAACAAGTTGTGAAAACAATGTTATCAAAGGGATATGTTTTAACCAAAGATGCACTTGTAAAGGCTAAAGCTTTTGATGACTCTTGTCAAGTCTCAGCTACTGCAGCAGCAAAAGTTTATGACCTTAGCAATAGGATTGGACTCACTGAGACAATTCATGCTGGCATGGAAACCGTTAAGTACATTGACGAGAAGTTTCACGTTTCCAATATCACCAGATCCGCAGCAGCGGTAACGGGAACGGCAGCTGTGGTGGCAGTGACGGTAACTGGGAAAGCAGCGATGGCAGCAGGCAATGCTGTAATAAACAGCAGCTACTTTTCAAAGGGTGCGCTTTGGGTTTCGGATATGTTGAGTCGTGCTGCTAAGGCTGCAGCTGAAGTAGGTAAGAATAACAGTAAATGAAAGAAAGAAAAGAAAATAACTTTGAATCAAACCATAAAAAATAACTATCATTCTTTAGCCTCATCATGAAAAATATATATATATACTCAAGTTTTTTCTTGTTGTTTTCACTCAAAATCATAATCTCGATGTGCATCTTGGTATGATTATAAGTAATCATCACAATGCTGATTTGTAAACTTGTTCGGGTAAATATGATAGATACAACGTTGAACATTTGAACGATTTGTTCTACTTTAGTATCATGTTAAATTTCAGACAAGGAATTATAATCTCTATATTTGGTAAACTATATATGTATAGTTGTAAACTAAAACTACTCTAATGGTGCAATTTCAATTTCATTATAT

mRNA sequence

CCCTCCCCCGGCCCCCTCTCCTCTTCTTCTCTCTGAGCTTCAAACAGGTATTGTGCTCCAATTCAAGTTTTCAACATAGAAAAAGCTGTGCGAAACAATGTACAGTGGGGATTATACTGCTGAAGTTACAAGCTTATCACCTAAAGCCACAGAGAATGATGTTTATGATTTTTTCTCTCATTGTGGCGCGGTAGAGCACGTAGAAATCCTCAGATCAGGCGATTATGCATGTACTGCTTATGTGACCTTTCGAGATGCTTTTGCCCTGGAAACTGCTATATTGCTTAGTGGGGCCGAAATCCTAGATCAATGTGTGTTCATATCGCGGTGGGGAACTTACGTAGATGAATCAGACACTTGGAACAGCCATTCACAAATGACCGATGACAATACAAGCTTAATGGTGACAGAAATAATGCATTCTGTTCACACACCAGGGGAGGCTGTAACTATGGCTCAACAAGTTGTGAAAACAATGTTATCAAAGGGATATGTTTTAACCAAAGATGCACTTGTAAAGGCTAAAGCTTTTGATGACTCTTGTCAAGTCTCAGCTACTGCAGCAGCAAAAGTTTATGACCTTAGCAATAGGATTGGACTCACTGAGACAATTCATGCTGGCATGGAAACCGTTAAGTACATTGACGAGAAGTTTCACGTTTCCAATATCACCAGATCCGCAGCAGCGGTAACGGGAACGGCAGCTGTGGTGGCAGTGACGGTAACTGGGAAAGCAGCGATGGCAGCAGGCAATGCTGTAATAAACAGCAGCTACTTTTCAAAGGGTGCGCTTTGGGTTTCGGATATGTTGAGTCGTGCTGCTAAGGCTGCAGCTGAAGTAGGTAAGAATAACAGTAAATGAAAGAAAGAAAAGAAAATAACTTTGAATCAAACCATAAAAAATAACTATCATTCTTTAGCCTCATCATGAAAAATATATATATATACTCAAGTTTTTTCTTGTTGTTTTCACTCAAAATCATAATCTCGATGTGCATCTTGGTATGATTATAAGTAATCATCACAATGCTGATTTGTAAACTTGTTCGGGTAAATATGATAGATACAACGTTGAACATTTGAACGATTTGTTCTACTTTAGTATCATGTTAAATTTCAGACAAGGAATTATAATCTCTATATTTGGTAAACTATATATGTATAGTTGTAAACTAAAACTACTCTAATGGTGCAATTTCAATTTCATTATAT

Coding sequence (CDS)

ATGTACAGTGGGGATTATACTGCTGAAGTTACAAGCTTATCACCTAAAGCCACAGAGAATGATGTTTATGATTTTTTCTCTCATTGTGGCGCGGTAGAGCACGTAGAAATCCTCAGATCAGGCGATTATGCATGTACTGCTTATGTGACCTTTCGAGATGCTTTTGCCCTGGAAACTGCTATATTGCTTAGTGGGGCCGAAATCCTAGATCAATGTGTGTTCATATCGCGGTGGGGAACTTACGTAGATGAATCAGACACTTGGAACAGCCATTCACAAATGACCGATGACAATACAAGCTTAATGGTGACAGAAATAATGCATTCTGTTCACACACCAGGGGAGGCTGTAACTATGGCTCAACAAGTTGTGAAAACAATGTTATCAAAGGGATATGTTTTAACCAAAGATGCACTTGTAAAGGCTAAAGCTTTTGATGACTCTTGTCAAGTCTCAGCTACTGCAGCAGCAAAAGTTTATGACCTTAGCAATAGGATTGGACTCACTGAGACAATTCATGCTGGCATGGAAACCGTTAAGTACATTGACGAGAAGTTTCACGTTTCCAATATCACCAGATCCGCAGCAGCGGTAACGGGAACGGCAGCTGTGGTGGCAGTGACGGTAACTGGGAAAGCAGCGATGGCAGCAGGCAATGCTGTAATAAACAGCAGCTACTTTTCAAAGGGTGCGCTTTGGGTTTCGGATATGTTGAGTCGTGCTGCTAAGGCTGCAGCTGAAGTAGGTAAGAATAACAGTAAATGA

Protein sequence

MYSGDYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDNTSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYDLSNRIGLTETIHAGMETVKYIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEVGKNNSK

Homology

[Close]

BLAST of Lsi02G014930 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.9e-25
Identity = 86/252 (34.13%), Postives = 133/252 (52.78%), Query Frame = 0


Query: 7   TAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFALETAILLSGA 66
           + +V +LS  ATE+D+ +FFS  G VE ++I +S ++  +AYVTF++    ETA+LLSGA
Sbjct: 7   SVKVGNLSSGATEHDIKEFFSFSGEVESIDI-QSNEH--SAYVTFKETQGAETAVLLSGA 66

Query: 67  EILDQCVFISRWGTYVDESDTWNSHSQMTDDNTSLMVTEIMHSVHTPGEAVTMAQQVVKT 126
            I DQ V I     Y   S     H++        +V +              A+ VV +
Sbjct: 67  SIADQSVIIELAPNY---SPPAAPHAETQSSGAESVVQK--------------AEDVVSS 126

Query: 127 MLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYDLSNRIGLTETIHAGM----ETVKYI 186
           ML+KG++L KDA+ KAKAFD+    ++TA A V  L  +IGL++ + AG     E +K +
Sbjct: 127 MLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAV 186

Query: 187 DEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAA 246
           D+ F V+  T+S  A              +   +AG+AV+ + Y   G  W +   +R A
Sbjct: 187 DQNFQVTERTKSVYA-----------AAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVA 227

Query: 247 KAAAEVGKNNSK 255
           +AA EVG+   +
Sbjct: 247 QAAGEVGQKTKE 227

[Close]

BLAST of Lsi02G014930 vs. ExPASy TrEMBL
Match: A0A5A7T9G0 (Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G003300 PE=4 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.4e-126
Identity = 241/254 (94.88%), Postives = 249/254 (98.03%), Query Frame = 0


Query: 1   MYSGDYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MY+G YTAEVTSLSPKATENDVYDFFSHCG VEHVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 1   MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDNTSLMVTEIMHSVHTPGEAVTMA 120
           ILLSGAEILDQCVFISRWG Y+DESDTWNS +QMT+DNTSLMVTEIMHSVHTPGEAVTMA
Sbjct: 61  ILLSGAEILDQCVFISRWGAYIDESDTWNSPAQMTNDNTSLMVTEIMHSVHTPGEAVTMA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYDLSNRIGLTETIHAGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVY+LSNRIGLTETI+AGMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINAGMETVK 180

Query: 181 YIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240
           YIDEKFHVS+ITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR
Sbjct: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240

Query: 241 AAKAAAEVGKNNSK 255
           AAKAAAE GKN+SK
Sbjct: 241 AAKAAAEAGKNSSK 254

[Close]

BLAST of Lsi02G014930 vs. ExPASy TrEMBL
Match: A0A5D3CUV4 (Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00390 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 2.9e-124
Identity = 237/249 (95.18%), Postives = 244/249 (97.99%), Query Frame = 0


Query: 1   MYSGDYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MY+G YTAEVTSLSPKATENDVYDFFSHCG VEHVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 1   MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDNTSLMVTEIMHSVHTPGEAVTMA 120
           ILLSGAEILDQCVFISRWG Y+DESDTWNS +QMT+DNTSLMVTEIMHSVHTPGEAVTMA
Sbjct: 61  ILLSGAEILDQCVFISRWGAYIDESDTWNSPAQMTNDNTSLMVTEIMHSVHTPGEAVTMA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYDLSNRIGLTETIHAGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVY+LSNRIGLTETI+AGMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINAGMETVK 180

Query: 181 YIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240
           YIDEKFHVS+ITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR
Sbjct: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240

Query: 241 AAKAAAEVG 250
           AAKAAAE G
Sbjct: 241 AAKAAAEAG 249

[Close]

BLAST of Lsi02G014930 vs. ExPASy TrEMBL
Match: A0A0A0KS66 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G635450 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 8.3e-124
Identity = 236/254 (92.91%), Postives = 247/254 (97.24%), Query Frame = 0


Query: 1   MYSGDYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MY+G YTAEVTSLSPKATENDVYDFFSHCG VEHVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 120 MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 179

Query: 61  ILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDNTSLMVTEIMHSVHTPGEAVTMA 120
           ILLSGAEILDQCVFISRWG Y+DESD+WNS +QMT+DNTSLM T+IMHSVHTPGEAVTMA
Sbjct: 180 ILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMA 239

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYDLSNRIGLTETIHAGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVY+LSNRIGLTETI++GMETVK
Sbjct: 240 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVK 299

Query: 181 YIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240
           YIDEKFHVS+ITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR
Sbjct: 300 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 359

Query: 241 AAKAAAEVGKNNSK 255
           AAKAAAE GK+ SK
Sbjct: 360 AAKAAAEAGKSISK 373

[Close]

BLAST of Lsi02G014930 vs. ExPASy TrEMBL
Match: A0A6J1C268 (binding partner of ACD11 1 OS=Momordica charantia OX=3673 GN=LOC111006739 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 5.1e-121
Identity = 233/254 (91.73%), Postives = 244/254 (96.06%), Query Frame = 0


Query: 1   MYSGDYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MY G YTAEVTSLSPKATE DVYDFFSHCGAVEHVEILRSG+YACTAYVTFRDAFALETA
Sbjct: 1   MYPGGYTAEVTSLSPKATEQDVYDFFSHCGAVEHVEILRSGEYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDNTSLMVTEIMHSVHTPGEAVTMA 120
           ILLSGAEILDQCVFISRWGTY+DESDT NS S+ TDDNTSLMVT+IMHSV+TPGEAVTMA
Sbjct: 61  ILLSGAEILDQCVFISRWGTYIDESDTSNSPSRTTDDNTSLMVTQIMHSVYTPGEAVTMA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYDLSNRIGLTETIHAGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKV +LSNRIGLTE IHAGMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEKIHAGMETVK 180

Query: 181 YIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240
           YIDEKFHVS+ITRSAAAVTGTAAVVAVT+TGKAAMAAGNA++NSSYFSKGALWVSDMLSR
Sbjct: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTMTGKAAMAAGNAMVNSSYFSKGALWVSDMLSR 240

Query: 241 AAKAAAEVGKNNSK 255
           AA AAA+VGKN SK
Sbjct: 241 AANAAADVGKNTSK 254

[Close]

BLAST of Lsi02G014930 vs. ExPASy TrEMBL
Match: A0A6J1GKI7 (binding partner of ACD11 1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111455139 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.9e-115
Identity = 222/254 (87.40%), Postives = 235/254 (92.52%), Query Frame = 0


Query: 1   MYSGDYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MYSG YTAEVTSLSPKATENDVYDFFSHCGAV+HVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 1   MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDNTSLMVTEIMHSVHTPGEAVTMA 120
           ILLSGAEILDQCVFI RWGTY DES  WN+ SQMTD+NTS MV EIMHS +TPGEAVT+A
Sbjct: 61  ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDNNTSPMVAEIMHSAYTPGEAVTVA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYDLSNRIGLTETIHAGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSA+AAAKV +LSNRIGLT+ IH GMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 180

Query: 181 YIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240
           YIDEK+HVS+ITRS A VTGTAAVVA+ V GKAAMAAG AV+NSSYFSKGALWVSDMLSR
Sbjct: 181 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 240

Query: 241 AAKAAAEVGKNNSK 255
           A+KAAAEVG  NSK
Sbjct: 241 ASKAAAEVGTRNSK 254

[Close]

BLAST of Lsi02G014930 vs. NCBI nr
Match: XP_038890704.1 (binding partner of ACD11 1 [Benincasa hispida] >XP_038890705.1 binding partner of ACD11 1 [Benincasa hispida] >XP_038890706.1 binding partner of ACD11 1 [Benincasa hispida])

HSP 1 Score: 468.4 bits (1204), Expect = 4.0e-128
Identity = 244/254 (96.06%), Postives = 250/254 (98.43%), Query Frame = 0


Query: 1   MYSGDYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MYS  YTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 1   MYSEGYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDNTSLMVTEIMHSVHTPGEAVTMA 120
           ILLSGAEILDQCVFISRWGTY+DESDTWNSHS +T+DNTSLMVTEIMHSVHTPGEAVTMA
Sbjct: 61  ILLSGAEILDQCVFISRWGTYIDESDTWNSHSHITNDNTSLMVTEIMHSVHTPGEAVTMA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYDLSNRIGLTETIHAGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVY+LSNRIGLTETIHAGMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETIHAGMETVK 180

Query: 181 YIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240
           YIDEKFHVS+ITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYF+KGALWVSDMLSR
Sbjct: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFAKGALWVSDMLSR 240

Query: 241 AAKAAAEVGKNNSK 255
           AAKAAAEVG NNSK
Sbjct: 241 AAKAAAEVGNNNSK 254

[Close]

BLAST of Lsi02G014930 vs. NCBI nr
Match: KAA0039508.1 (binding partner of ACD11 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 462.2 bits (1188), Expect = 2.8e-126
Identity = 241/254 (94.88%), Postives = 249/254 (98.03%), Query Frame = 0


Query: 1   MYSGDYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MY+G YTAEVTSLSPKATENDVYDFFSHCG VEHVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 1   MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDNTSLMVTEIMHSVHTPGEAVTMA 120
           ILLSGAEILDQCVFISRWG Y+DESDTWNS +QMT+DNTSLMVTEIMHSVHTPGEAVTMA
Sbjct: 61  ILLSGAEILDQCVFISRWGAYIDESDTWNSPAQMTNDNTSLMVTEIMHSVHTPGEAVTMA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYDLSNRIGLTETIHAGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVY+LSNRIGLTETI+AGMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINAGMETVK 180

Query: 181 YIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240
           YIDEKFHVS+ITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR
Sbjct: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240

Query: 241 AAKAAAEVGKNNSK 255
           AAKAAAE GKN+SK
Sbjct: 241 AAKAAAEAGKNSSK 254

[Close]

BLAST of Lsi02G014930 vs. NCBI nr
Match: TYK15262.1 (binding partner of ACD11 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 454.5 bits (1168), Expect = 5.9e-124
Identity = 237/249 (95.18%), Postives = 244/249 (97.99%), Query Frame = 0


Query: 1   MYSGDYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MY+G YTAEVTSLSPKATENDVYDFFSHCG VEHVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 1   MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDNTSLMVTEIMHSVHTPGEAVTMA 120
           ILLSGAEILDQCVFISRWG Y+DESDTWNS +QMT+DNTSLMVTEIMHSVHTPGEAVTMA
Sbjct: 61  ILLSGAEILDQCVFISRWGAYIDESDTWNSPAQMTNDNTSLMVTEIMHSVHTPGEAVTMA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYDLSNRIGLTETIHAGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVY+LSNRIGLTETI+AGMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINAGMETVK 180

Query: 181 YIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240
           YIDEKFHVS+ITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR
Sbjct: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240

Query: 241 AAKAAAEVG 250
           AAKAAAE G
Sbjct: 241 AAKAAAEAG 249

[Close]

BLAST of Lsi02G014930 vs. NCBI nr
Match: XP_004148690.1 (binding partner of ACD11 1 [Cucumis sativus] >XP_031742124.1 binding partner of ACD11 1 [Cucumis sativus] >KAE8648916.1 hypothetical protein Csa_009005 [Cucumis sativus])

HSP 1 Score: 453.0 bits (1164), Expect = 1.7e-123
Identity = 236/254 (92.91%), Postives = 247/254 (97.24%), Query Frame = 0


Query: 1   MYSGDYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MY+G YTAEVTSLSPKATENDVYDFFSHCG VEHVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 1   MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDNTSLMVTEIMHSVHTPGEAVTMA 120
           ILLSGAEILDQCVFISRWG Y+DESD+WNS +QMT+DNTSLM T+IMHSVHTPGEAVTMA
Sbjct: 61  ILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYDLSNRIGLTETIHAGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVY+LSNRIGLTETI++GMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVK 180

Query: 181 YIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240
           YIDEKFHVS+ITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR
Sbjct: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240

Query: 241 AAKAAAEVGKNNSK 255
           AAKAAAE GK+ SK
Sbjct: 241 AAKAAAEAGKSISK 254

[Close]

BLAST of Lsi02G014930 vs. NCBI nr
Match: XP_022134513.1 (binding partner of ACD11 1 [Momordica charantia])

HSP 1 Score: 443.7 bits (1140), Expect = 1.0e-120
Identity = 233/254 (91.73%), Postives = 244/254 (96.06%), Query Frame = 0


Query: 1   MYSGDYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MY G YTAEVTSLSPKATE DVYDFFSHCGAVEHVEILRSG+YACTAYVTFRDAFALETA
Sbjct: 1   MYPGGYTAEVTSLSPKATEQDVYDFFSHCGAVEHVEILRSGEYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDNTSLMVTEIMHSVHTPGEAVTMA 120
           ILLSGAEILDQCVFISRWGTY+DESDT NS S+ TDDNTSLMVT+IMHSV+TPGEAVTMA
Sbjct: 61  ILLSGAEILDQCVFISRWGTYIDESDTSNSPSRTTDDNTSLMVTQIMHSVYTPGEAVTMA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYDLSNRIGLTETIHAGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKV +LSNRIGLTE IHAGMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEKIHAGMETVK 180

Query: 181 YIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240
           YIDEKFHVS+ITRSAAAVTGTAAVVAVT+TGKAAMAAGNA++NSSYFSKGALWVSDMLSR
Sbjct: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTMTGKAAMAAGNAMVNSSYFSKGALWVSDMLSR 240

Query: 241 AAKAAAEVGKNNSK 255
           AA AAA+VGKN SK
Sbjct: 241 AANAAADVGKNTSK 254

[Close]

BLAST of Lsi02G014930 vs. TAIR 10
Match: AT3G01210.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 246.5 bits (628), Expect = 2.3e-65
Identity = 138/253 (54.55%), Postives = 180/253 (71.15%), Query Frame = 0


Query: 1   MYSGDYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MY   Y A+VT+LSP+ATE DV+ FFSHCG VE VEI      A TAYVTFRDA+AL+ A
Sbjct: 1   MYPCGYVAQVTNLSPQATEKDVHRFFSHCGIVELVEITGCQGDALTAYVTFRDAYALDMA 60

Query: 61  ILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDNTSLMVTEIMHSVHTPGEAVTMA 120
           +LLSGA I+DQ V+IS +G Y+ ES+         +++ S+ VT       +PGEA+T+A
Sbjct: 61  VLLSGATIVDQTVWISVYGVYLHESNNLRQ-----EEDYSVTVTRSDAFASSPGEAITVA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYDLSNRIGLTETIHAGMETVK 180
           QQVV+TML+KGYVL+KDA+ KAKA D+S + S+  A K+ ++S+ +GLT+ I + ME V+
Sbjct: 121 QQVVQTMLAKGYVLSKDAIGKAKALDESQRFSSLVATKLAEISHYLGLTQNIQSSMELVR 180

Query: 181 YIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240
             DEK+H S+ T+SA  VTGTAAV A T+TGK A AA  +V+NS YF+ GALW SD L R
Sbjct: 181 SADEKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATSVVNSRYFANGALWFSDALGR 240

Query: 241 AAKAAAEVGKNNS 254
           AAKAAA +G   S
Sbjct: 241 AAKAAAHIGGGGS 248

[Close]

BLAST of Lsi02G014930 vs. TAIR 10
Match: AT1G14340.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 223.4 bits (568), Expect = 2.1e-58
Identity = 125/249 (50.20%), Postives = 166/249 (66.67%), Query Frame = 0


Query: 6   YTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFALETAILLSG 65
           Y  EVT LSP  T ND+ DFFS  G ++ ++I+RSG+ ACTAYV F+D+++ ETA+LL+G
Sbjct: 7   YGVEVTGLSPSVTHNDLIDFFSFSGTIQDIDIVRSGEQACTAYVMFKDSYSQETAVLLTG 66

Query: 66  AEILDQCVFISRWGTYVDESDTWNSHSQMTDDNTSLMVTEIMHSVHTPGEAVTMAQQVVK 125
           A ILDQ V I+RWG + +E D WN+ S+  +D +         S    GEAVT AQ+VVK
Sbjct: 67  ATILDQRVCITRWGQHHEEFDFWNATSRGFEDESDSQ-HYAQRSEFNAGEAVTKAQEVVK 126

Query: 126 TMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYDLSNRIGLTETIHAGMETVKYIDEK 185
            ML+ G+VL KDAL KAKAFD+S  VSA A A+V  L  RIGLT+ I  G+E V+  D++
Sbjct: 127 IMLATGFVLGKDALSKAKAFDESHGVSAAAVARVSQLEQRIGLTDKIFTGLEAVRMTDQR 186

Query: 186 FHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAA 245
           +HVS+  +S           AV  TG+ A AA  +V+NSSYFS GALW+S  L RAAKAA
Sbjct: 187 YHVSDTAKS-----------AVFATGRTAAAAATSVVNSSYFSSGALWLSGALERAAKAA 243

Query: 246 AEVGKNNSK 255
           +++G   S+
Sbjct: 247 SDLGTRGSR 243

[Close]

BLAST of Lsi02G014930 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-30
Identity = 89/248 (35.89%), Postives = 135/248 (54.44%), Query Frame = 0


Query: 7   TAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFALETAILLSGA 66
           T +V+++S +ATE D+ +FFS  G + ++E     D +  AYVTF+D    ETA+LL+G+
Sbjct: 5   TVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVLLTGS 64

Query: 67  EILDQCVFISRWGTYVDESDTWNSHSQMTDDNTSLMVTEIMHSVHTPGEAVTMAQQVVKT 126
            I+D  V ++    Y    D   S   + + N S   T    SV         A+ VV  
Sbjct: 65  TIVDSSVTVTMSPDYQLPPDALASIESLKESNKSSSPTREDVSV------FRKAEDVVSG 124

Query: 127 MLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYDLSNRIGLTETIHAG----METVKYI 186
           M+SKG+VL KDA+ KAK+ D+  Q+++TA+A+V     RIG TE I+ G     E VK +
Sbjct: 125 MISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGTTVVSEKVKEV 184

Query: 187 DEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAA 246
           D+KF V+  T+S           A+    +    AG+A++ + Y   GA WV+   +R +
Sbjct: 185 DQKFQVTEKTKS-----------AIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVS 235

Query: 247 KAAAEVGK 251
           KAA EVG+
Sbjct: 245 KAAEEVGQ 235

[Close]

BLAST of Lsi02G014930 vs. TAIR 10
Match: AT5G32450.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 129.0 bits (323), Expect = 5.3e-30
Identity = 92/257 (35.80%), Postives = 136/257 (52.92%), Query Frame = 0


Query: 7   TAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFALETAILLSGA 66
           + +V ++S  ATE ++++FFS  G +EH+EI +    +  A+VTF D  ALE A+LLSGA
Sbjct: 6   SVQVNNVSDLATEREIHEFFSFSGDIEHIEIQKEFGQSRIAFVTFTDPKALEIALLLSGA 65

Query: 67  EILDQCVFISRWGTYVDESDTWNSHSQMTDDNTSLMVTEIMHSVHTPGEA-----VTMAQ 126
            I+DQ V I+R   YV   +T     +M D+   L + E      T  +      V+ AQ
Sbjct: 66  TIVDQIVTITRAENYVQRRET--QEVRMLDNAMPLGLQESTTQTKTNMDGNSRAYVSKAQ 125

Query: 127 QVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYDLSNRIGLTETIHAGM----E 186
            VV T+L+KG  L +DA+ KAKAFD+  Q+ A A+AKV     R+GLTE +  G+    E
Sbjct: 126 DVVATVLAKGSALGQDAVNKAKAFDEKHQLRANASAKVSSFDKRVGLTEKLSVGISAVNE 185

Query: 187 TVKYIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDM 246
            VK +D+K  VS+ T           + A+    +     G+AV +S Y + GA W S  
Sbjct: 186 KVKSVDQKLQVSDKT-----------MAAIFAAERKLNDTGSAVKSSRYVTAGAAWFSGA 245

Query: 247 LSRAAKAAAEVGKNNSK 255
            S+ A+     G    +
Sbjct: 246 FSKVARVGQVAGSKTKE 249

[Close]

BLAST of Lsi02G014930 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 123.6 bits (309), Expect = 2.2e-28
Identity = 83/249 (33.33%), Postives = 137/249 (55.02%), Query Frame = 0


Query: 7   TAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFALETAILLSGA 66
           T +V+++S  AT+ D+ +FFS  G + ++E     +    AYVTF+D    ETA+LLSGA
Sbjct: 5   TVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVLLSGA 64

Query: 67  EILDQCVFISRWGTYVDESDTWNSHSQMTDDNTSLMVTEIMHSVHTPGEAV-TMAQQVVK 126
            I+D  V +S    Y           Q++ +  + +  +  +     G++V   A+ VV 
Sbjct: 65  TIVDSSVIVSMAPDY-----------QLSPEALASLEPKDSNKSPKAGDSVLRKAEDVVS 124

Query: 127 TMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYDLSNRIGLTETIHAGM----ETVKY 186
           +ML+KG++L KDA+ KAK+ D+  Q+++TA+AKV     +IG T+ I+ G     E V+ 
Sbjct: 125 SMLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVGEKVRE 184

Query: 187 IDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRA 246
           +D+K+ VS  T+S           A+    +    AG+A++ + Y   GA WV+   ++ 
Sbjct: 185 VDQKYQVSEKTKS-----------AIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKV 231

Query: 247 AKAAAEVGK 251
           AKAA EVG+
Sbjct: 245 AKAAEEVGQ 231

The following BLAST results are available for this feature:

BLAST of Lsi02G014930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	2.9e-25	34.13	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]

BLAST of Lsi02G014930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T9G0	1.4e-126	94.88	Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3CUV4	2.9e-124	95.18	Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0KS66	8.3e-124	92.91	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G635450 PE=4 SV...	[more]
A0A6J1C268	5.1e-121	91.73	binding partner of ACD11 1 OS=Momordica charantia OX=3673 GN=LOC111006739 PE=4 S...	[more]
A0A6J1GKI7	1.9e-115	87.40	binding partner of ACD11 1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of Lsi02G014930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890704.1	4.0e-128	96.06	binding partner of ACD11 1 [Benincasa hispida] >XP_038890705.1 binding partner o...	[more]
KAA0039508.1	2.8e-126	94.88	binding partner of ACD11 1-like [Cucumis melo var. makuwa]	[more]
TYK15262.1	5.9e-124	95.18	binding partner of ACD11 1-like [Cucumis melo var. makuwa]	[more]
XP_004148690.1	1.7e-123	92.91	binding partner of ACD11 1 [Cucumis sativus] >XP_031742124.1 binding partner of ...	[more]
XP_022134513.1	1.0e-120	91.73	binding partner of ACD11 1 [Momordica charantia]	[more]

BLAST of Lsi02G014930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01210.1	2.3e-65	54.55	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G14340.1	2.1e-58	50.20	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	1.1e-30	35.89	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G32450.1	5.3e-30	35.80	RNA binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G17720.1	2.2e-28	33.33	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 7..76 e-value: 2.4E-6 score: 37.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 10..70 e-value: 9.7E-8 score: 31.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 6..80 score: 9.285698
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 5..85 e-value: 2.2E-9 score: 39.4
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 1..254
None	No IPR available	PANTHER	PTHR32343:SF16	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 1..254
IPR034360	Vip1-like, RNA recognition motif, plant	CDD	cd12269	RRM_Vip1_like	coord: 9..76 e-value: 6.19976E-33 score: 112.924
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 9..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G014930.1	Lsi02G014930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050832	defense response to fungus
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding