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Lsi02G014810 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAATTTGAGTATCCAAATGAAGCTTCATCAGCAAACTGTCAAGAAACTTCATCCCAATTCTCCAACTCCAATGCTCATTCTCTTTCTCCTTTTCCAGCTTATTGGTATAGCCATTTCATGTCAAGACATTGCATCACATAACTCTTCTCAGGTAATTAATTACACATGTTTGTTTATTTTCCATTCAAATTTGATTAAATTGAGACTTTATTTACTTGTTCAGCTGGTTTCAGAAGGCAGTGGAGACTATGACTTCTTTTACCTTGTTCAACAGGTAATCAAATTTTTGTTTGTTCCCATTTGGGTAATATTATGATCTCTATGCTTATTTGTGGCTATTTGGTAAGGATTAGTGGCAGATTTCTTTGTGCAATTTGAGGCCTTGTCAAAAACCAGCAAGACCCACTTTCAGTATTTATGGCTTCTGGCCTTCTTCTTCTTCAGGGATTCCCAATTGCAAAATTGGAACAAATTTTGATCCTTCAAAGGTATTTTTGCTGGACAGAGAGGGTTTGATGATTCACACTCATTATGATGTTTTGTTTGTAAATGTGGCTTTTCATAGATTTTGGACCTGAAAAATGAGTTAGATAGAGAATGGCCATCTCTTGAGGTGGAGGAGAATGAGAAAATATGGAAGAAAGAGTGGGAAAGGCATGGAATTTGTTCTGAGCCATTGCTCACTCAGCATGCATTCTTTGAAACTGCACTCAAACTTAAGCAAACTTTTGATCTCTTCACTATCCTAGCAAACAGAGGTTTGTGTTTCAAGCTTTATACAAAACTTTGATCTTCATTGAAAAATATTCCACTAGTCTTTAGTAAGGGAAATCACTTTATTTTAGCCATAATACTTCTTAGTTCTTCAAGTTTTGAAAATTGTTGTAAGTAGTTCTTAAACTAGTTCATTGTTAATATTTTAGACAAAAATGTTGTAAGTTAAGAGATAGAATTGCTACCAACTATTCAGAGATAATGGGAGGAGATAGGAAGGAAAATAAAACAAAGGATTCACTAACCTTTGGAAGGAAGACAAGCACGTCCTCGTGATGTGATAACAAATAGTAGGGCTAACTTTTCAAACATCTGTTCAATTAGATGACAAAGACAAGCGCAAAAAAACAATAAAGAAAGCATATTATCTATTCTTTCATTGGAGTTAATCCACGTGTTGATGCCAAAATTCGGACAGAAAAAAGAGTTTGACCTTCAAGTCACTACAACGATAAATTTGTCTAGAGGGGAAAGAACGTGACTTACAGAAGAAAAAGGAACCTACACACCATTGTGCTGCTACAAACATTTTGATGCTTAACGTAGAGAGTGAAATAGTGTGGAGTTTTAAGATTTGATAGTCAAAATGGACTTACTCGTTCTTAAAGTTATAGCAATTAATTTATATGAATAGTTGACCTAGGTTATCCTCCATAGGATTTTGAAGTCACATTAAGATAAACCTTAGAATCCTCAGGTAAGGGCACACAGAAGCATGCCTTGTTTGACATTTTGGAAGGGTCGGCCTAGGTCGAGGGCAAGCATCTCTCTCTAGGCCCATTTTAGGCCTAGGGTCACGTCAGGGCATGCCCCACTAGGTACTTTGTTAGGTTTAGGCTGAGCTCAAGCCAACCCTTTTCTTTAGGCCTATTTTAGTCCTAGAGTGCTATTTTCAGTCAGAATTTGTTACTTTCTTAGCTCTATTGTTTTTGTTTTTGTTTGATGTCGATTATGTCCTTTGGTCTAAAATCACTCATAACACTATATTTGAGTAAATGTATCATCCTTTAGCTTATCATGTCATATCTTCATCAAACCACTAAGTGATACGCATACTCAAAACACCACTCAAAATCATTTTCAAATGTTCAAAAGATTATCTACATAGACAAGAAAGTATATTTCAAGACATAACTCCAACGAAGGTAACACACAGTACATTAAATGTGAAGAATCAAACCTGACATACAGCATCCTATGTTATTATGTGAATTAATAACTTTCTTTCAACTACTTTGACTTCACTTTCTAGACATCATTACAATACTTAGCATTATGTTATCAGTTTTTTGTTTTTTTAGTTGAATAATGTGGAGAAAACAATGTTTATGAAATGGTTGGAATGCAGGAATATTTCCATTTGGAGAGGTGTATGGCTTAGAAAACATAAGTGACGCCATTAGAGCTGCGACAGGACATACTCCACAAGTGGAATGCAAATCATACAAACGCATTCCTCTGCTCTCCAGTATCTTCCTTTGCTTCCAATACACTGCAACTTCCATGCATATTGTGGACTGCCCCCTTATTAGAAGATGCAATTTTCAAGCAATCCTTTTCCCTTATGATCTATTTGGTCCATCTTAGAAATTGAAAATCCACTCTCTAATGGCGCCAGAAACAATCTCCATCTATTTCTGTTTCTCCTATCAACTTTTTGATGTTTTATTAATGGCTATTTACACTGTTCTAATTTTACACCTCTGTTTTAATGTTTATGTTAAATAATAAATTGTTTGTTACTTATCAAAGATATTGATAACAATTTATTTTATACGGCTACGTAGTGTTGGAAATT AAAAATTTGAGTATCCAAATGAAGCTTCATCAGCAAACTGTCAAGAAACTTCATCCCAATTCTCCAACTCCAATGCTCATTCTCTTTCTCCTTTTCCAGCTTATTGGTATAGCCATTTCATGTCAAGACATTGCATCACATAACTCTTCTCAGCTGGTTTCAGAAGGCAGTGGAGACTATGACTTCTTTTACCTTGTTCAACAGATTTCTTTGTGCAATTTGAGGCCTTGTCAAAAACCAGCAAGACCCACTTTCAGTATTTATGGCTTCTGGCCTTCTTCTTCTTCAGGGATTCCCAATTGCAAAATTGGAACAAATTTTGATCCTTCAAAGATTTTGGACCTGAAAAATGAGTTAGATAGAGAATGGCCATCTCTTGAGGTGGAGGAGAATGAGAAAATATGGAAGAAAGAGTGGGAAAGGCATGGAATTTGTTCTGAGCCATTGCTCACTCAGCATGCATTCTTTGAAACTGCACTCAAACTTAAGCAAACTTTTGATCTCTTCACTATCCTAGCAAACAGAGGAATATTTCCATTTGGAGAGGTGTATGGCTTAGAAAACATAAGTGACGCCATTAGAGCTGCGACAGGACATACTCCACAAGTGGAATGCAAATCATACAAACGCATTCCTCTGCTCTCCAGTATCTTCCTTTGCTTCCAATACACTGCAACTTCCATGCATATTGTGGACTGCCCCCTTATTAGAAGATGCAATTTTCAAGCAATCCTTTTCCCTTATGATCTATTTGGTCCATCTTAGAAATTGAAAATCCACTCTCTAATGGCGCCAGAAACAATCTCCATCTATTTCTGTTTCTCCTATCAACTTTTTGATGTTTTATTAATGGCTATTTACACTGTTCTAATTTTACACCTCTGTTTTAATGTTTATGTTAAATAATAAATTGTTTGTTACTTATCAAAGATATTGATAACAATTTATTTTATACGGCTACGTAGTGTTGGAAATT ATGAAGCTTCATCAGCAAACTGTCAAGAAACTTCATCCCAATTCTCCAACTCCAATGCTCATTCTCTTTCTCCTTTTCCAGCTTATTGGTATAGCCATTTCATGTCAAGACATTGCATCACATAACTCTTCTCAGCTGGTTTCAGAAGGCAGTGGAGACTATGACTTCTTTTACCTTGTTCAACAGATTTCTTTGTGCAATTTGAGGCCTTGTCAAAAACCAGCAAGACCCACTTTCAGTATTTATGGCTTCTGGCCTTCTTCTTCTTCAGGGATTCCCAATTGCAAAATTGGAACAAATTTTGATCCTTCAAAGATTTTGGACCTGAAAAATGAGTTAGATAGAGAATGGCCATCTCTTGAGGTGGAGGAGAATGAGAAAATATGGAAGAAAGAGTGGGAAAGGCATGGAATTTGTTCTGAGCCATTGCTCACTCAGCATGCATTCTTTGAAACTGCACTCAAACTTAAGCAAACTTTTGATCTCTTCACTATCCTAGCAAACAGAGGAATATTTCCATTTGGAGAGGTGTATGGCTTAGAAAACATAAGTGACGCCATTAGAGCTGCGACAGGACATACTCCACAAGTGGAATGCAAATCATACAAACGCATTCCTCTGCTCTCCAGTATCTTCCTTTGCTTCCAATACACTGCAACTTCCATGCATATTGTGGACTGCCCCCTTATTAGAAGATGCAATTTTCAAGCAATCCTTTTCCCTTATGATCTATTTGGTCCATCTTAG MKLHQQTVKKLHPNSPTPMLILFLLFQLIGIAISCQDIASHNSSQLVSEGSGDYDFFYLVQQISLCNLRPCQKPARPTFSIYGFWPSSSSGIPNCKIGTNFDPSKILDLKNELDREWPSLEVEENEKIWKKEWERHGICSEPLLTQHAFFETALKLKQTFDLFTILANRGIFPFGEVYGLENISDAIRAATGHTPQVECKSYKRIPLLSSIFLCFQYTATSMHIVDCPLIRRCNFQAILFPYDLFGPS Homology
BLAST of Lsi02G014810 vs. ExPASy Swiss-Prot
Match: P42813 (Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 3.3e-29 Identity = 81/223 (36.32%), Postives = 115/223 (51.57%), Query Frame = 0
BLAST of Lsi02G014810 vs. ExPASy Swiss-Prot
Match: P80022 (Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2) HSP 1 Score: 126.7 bits (317), Expect = 3.6e-28 Identity = 74/220 (33.64%), Postives = 114/220 (51.82%), Query Frame = 0
BLAST of Lsi02G014810 vs. ExPASy Swiss-Prot
Match: P42815 (Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 4.7e-28 Identity = 75/204 (36.76%), Postives = 108/204 (52.94%), Query Frame = 0
BLAST of Lsi02G014810 vs. ExPASy Swiss-Prot
Match: P80196 (Intracellular ribonuclease LX OS=Solanum lycopersicum OX=4081 GN=RNALX PE=1 SV=2) HSP 1 Score: 121.3 bits (303), Expect = 1.5e-26 Identity = 73/192 (38.02%), Postives = 101/192 (52.60%), Query Frame = 0
BLAST of Lsi02G014810 vs. ExPASy Swiss-Prot
Match: P23540 (Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 2.1e-20 Identity = 52/182 (28.57%), Postives = 93/182 (51.10%), Query Frame = 0
BLAST of Lsi02G014810 vs. ExPASy TrEMBL
Match: A0A0A0KSB0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636550 PE=3 SV=1) HSP 1 Score: 430.6 bits (1106), Expect = 4.3e-117 Identity = 206/250 (82.40%), Postives = 225/250 (90.00%), Query Frame = 0
BLAST of Lsi02G014810 vs. ExPASy TrEMBL
Match: A0A1S3C9W2 (ribonuclease 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498487 PE=3 SV=1) HSP 1 Score: 421.8 bits (1083), Expect = 2.0e-114 Identity = 198/239 (82.85%), Postives = 218/239 (91.21%), Query Frame = 0
BLAST of Lsi02G014810 vs. ExPASy TrEMBL
Match: A0A6J1K331 (ribonuclease 1-like OS=Cucurbita maxima OX=3661 GN=LOC111489614 PE=3 SV=1) HSP 1 Score: 421.4 bits (1082), Expect = 2.6e-114 Identity = 202/243 (83.13%), Postives = 220/243 (90.53%), Query Frame = 0
BLAST of Lsi02G014810 vs. ExPASy TrEMBL
Match: A0A1S3C9D7 (ribonuclease 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498487 PE=3 SV=1) HSP 1 Score: 416.8 bits (1070), Expect = 6.5e-113 Identity = 198/241 (82.16%), Postives = 218/241 (90.46%), Query Frame = 0
BLAST of Lsi02G014810 vs. ExPASy TrEMBL
Match: A0A6J1C1D3 (ribonuclease 1-like OS=Momordica charantia OX=3673 GN=LOC111006533 PE=3 SV=1) HSP 1 Score: 404.4 bits (1038), Expect = 3.3e-109 Identity = 200/257 (77.82%), Postives = 218/257 (84.82%), Query Frame = 0
BLAST of Lsi02G014810 vs. NCBI nr
Match: XP_038890876.1 (ribonuclease 3-like isoform X2 [Benincasa hispida]) HSP 1 Score: 478.4 bits (1230), Expect = 3.7e-131 Identity = 223/248 (89.92%), Postives = 238/248 (95.97%), Query Frame = 0
BLAST of Lsi02G014810 vs. NCBI nr
Match: XP_038890875.1 (ribonuclease 3-like isoform X1 [Benincasa hispida]) HSP 1 Score: 473.4 bits (1217), Expect = 1.2e-129 Identity = 223/250 (89.20%), Postives = 238/250 (95.20%), Query Frame = 0
BLAST of Lsi02G014810 vs. NCBI nr
Match: XP_011655995.1 (ribonuclease 1 isoform X2 [Cucumis sativus] >KAE8648923.1 hypothetical protein Csa_007813 [Cucumis sativus]) HSP 1 Score: 435.6 bits (1119), Expect = 2.8e-118 Identity = 206/248 (83.06%), Postives = 225/248 (90.73%), Query Frame = 0
BLAST of Lsi02G014810 vs. NCBI nr
Match: XP_004148699.1 (ribonuclease 1 isoform X1 [Cucumis sativus]) HSP 1 Score: 430.6 bits (1106), Expect = 8.9e-117 Identity = 206/250 (82.40%), Postives = 225/250 (90.00%), Query Frame = 0
BLAST of Lsi02G014810 vs. NCBI nr
Match: XP_008459319.1 (PREDICTED: ribonuclease 1-like isoform X2 [Cucumis melo]) HSP 1 Score: 421.8 bits (1083), Expect = 4.1e-114 Identity = 198/239 (82.85%), Postives = 218/239 (91.21%), Query Frame = 0
BLAST of Lsi02G014810 vs. TAIR 10
Match: AT1G14220.1 (Ribonuclease T2 family protein ) HSP 1 Score: 137.9 bits (346), Expect = 1.1e-32 Identity = 79/198 (39.90%), Postives = 110/198 (55.56%), Query Frame = 0
BLAST of Lsi02G014810 vs. TAIR 10
Match: AT2G02990.1 (ribonuclease 1 ) HSP 1 Score: 130.2 bits (326), Expect = 2.3e-30 Identity = 81/223 (36.32%), Postives = 115/223 (51.57%), Query Frame = 0
BLAST of Lsi02G014810 vs. TAIR 10
Match: AT1G26820.1 (ribonuclease 3 ) HSP 1 Score: 126.3 bits (316), Expect = 3.4e-29 Identity = 75/204 (36.76%), Postives = 108/204 (52.94%), Query Frame = 0
BLAST of Lsi02G014810 vs. TAIR 10
Match: AT1G14210.1 (Ribonuclease T2 family protein ) HSP 1 Score: 102.1 bits (253), Expect = 6.8e-22 Identity = 61/197 (30.96%), Postives = 94/197 (47.72%), Query Frame = 0
BLAST of Lsi02G014810 vs. TAIR 10
Match: AT2G39780.1 (ribonuclease 2 ) HSP 1 Score: 72.0 bits (175), Expect = 7.5e-13 Identity = 49/156 (31.41%), Postives = 73/156 (46.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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