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Lsi02G014660 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTAGAGACGGGTTTGAAAGGAAACTGAAGTCCGTCGTTGTTTTGCGTTGGACATCGTGAAATCGCCGTTTCTTAAGGCTTTGAATTTGATGCTCTCTTCAGAGTTGCATTCAACCTAAGCTGGGGGAGATCAATCAAGATGACGAAATGGAGTTTCTTGATTTCCATTCTTTTGGGCCTCATGTTCACCTTTGCTGATTCGATGCGGTTCGATCTTCAATCGGGCGCCACCAAATGCATTTCCGATGACATCAAGACCAATGCCATGACCGTCGGCAAATATTCGGTGGCTAGTCTCAACGAAGGTGCTCCCATTCCCGATTCTCACAAGCTCACTGTCAGGGTATTATTCATTTTTCTCTTTCCGATCCAATCTGAATTTGGGCTGTATCACGATCATCTCTATTCTGTTTTCAAATTGATTTCTCACTCTCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTATTTGTTGATTTTGGAATTTGTTTAGATGATTAATTTGTGGTAATGGAGGTTCTTAATTATTAGGTCAGTTCGCCTAACGGCAACACGTATCACAATGCGGATCATGTGGAATCTGGACATTTCGCGTTCACTGCAGCCGAGTCTGGTGATTATACTACTTGCTTTTGGGCTCCAGAACAAAAGCCTCCAGGTTCAGTTACAGTTGAATTTGATTGGAGGTCTGGTGTTTCTTCTAAGGATTGGTCCAAGGTTGCTAAGAAAGGCCAGGTTGAAGTAAGTCCTGAAATTTCTCTTTTTGTTTTTGGCTTACACATGGATGCATTTGCTCATTGTTTGGTGTTTTAATTTCCTAATTATGCTTATATCCTTGGAACAATTCATCTTGCGTGATATTAATTATGTTATTCTTTGAATAATTGTGTTGAACTTGTGGACATTGTGGTGGCTGCATGGTGAAATAAGTGTTCATGTTAGGTCATAATTTGATTTGATATACATTCAGTTTGTATAATAGGTTTTGTCTCCTTTTGCTTCCTTAAAATATCCTTAAAACAATTATGTTCAGCAAGAATCTCCCTTTTTTTTTTCTTGTAAAGAACTTACCACTATGGAATCAAGCAAAAGGAGACCAACATCAAGACAGTGTCAATGATATCATTTCTCTCTTGCCCAACCAAGTGAAGAACTTTTAACCTTCTTTGGGAAGTTCACCTTTTTGAGGTTGGCCCAAAAAAAAAAAAAAATTGGGCCTTCATAAAGCGAGAGGAGATGAAGGGTATAATGGAAAAAGGAGAAAGAAAAAAAAAAGAGAGAAGAAAGATGCTGCCAGAGAAATAGAGGATCCAAATCCTTTTATTCTGAAGAGTGGCACTAAGGACCACCTCACTGGTTGAAGGTGGACCATCATTTAAATTCCTTTTGAAGCTAAAATTGAAGGGGACCCTTGAAGCAAAAAATGCCAAAGAAGCCATAAAATTCTGGAGGAATGCAAAGTCCAGATCCTTTTATCTAGAAGCAAGGACTCTAACGATGGAGGCAGGATCATCATTTGAATTCATATTGAAACTGAAAATTAAGGAAGGGGAATCTTAATGGAAAAAGTAGAGTCAATGCCACCAAAACTAAGAGGATCATGCTTGTCGTTCAAAGTAACTGGGTTAGAGAGATAAAAATAAAAGGACAAAAGCAAAAAGGAATACAAGTCTTCCATATACAATGATTATTTATGGGTTTGAGTGGCTCCTAATTTATGAAGTTTATGCTGATATTTTCATCATATGGTCTCAATATGCTAATCTGATCATTTGTAGATCTCATAATATATTATGGCATAATAAAGAATGTATACTTTTACCAATGTGTCCTTGTCTAAACTGCATTTGCATCTCATCATTCCTGTGGCTCATGTCCATCTCTTAGGTATTTTTTATATCACATTTCATAGACGTTATTTTTCCATTGAGGTTTTTTTTTTTCCTTCTCCCCATAATAATATGTTTAAGATTTCCATTTATTTCAATAAGGATCTTTTGAGATTCAGTTTCGAACTCTTCTCTACGTAAATGTAGAAGATGGGATCTTGTTTTTGTTTTATTGAAGAATCTGTCTGAAATAGTTCATCATCTCTTATGCTAGGTAATGGAATTTGAGTTGAAGAAGTTGTATGACACAGTCGTCTCCATACATGATGAGATGTTTTATCTCCGTGAAAGGTACACACTATAATGAATTAAGTTACACACTATAATGAATTAAGTTTCTGAAGAGCCTATAAAGAAATGGCAGCATCTCTCCTCCTGCCTTAGGGGGGAATATGATCCTTTTTTTACATGTCATTCATCATAACCATACAGAATTTGATTAAAAAGATATTCTATCAAGATTTATTCTGCTACATTGTGATGATATATTCCTCAAGAGAACTTAGTTCATTGGCATTTGTATCTTTGTGGGCTCTGTATTTTGTAGATTCATTCTGTCTGAGTTGATGGTGTGATGATTGATTCTCTATTATTGTTTGTCTTATCTTTTTGGTTTTCAGAGAGGAGGAAATGCAGCAACTGAATAGATCAACAAATGCAAAGATGGCCACCTTTAGTATCCTATCACTTGGAGTTTGCTTGTCTGTGGCTGGTTTACAGTTATGGCATCTCAAGACATTCTTTGAACGCAAGAAGTTGCTGTGATTTTTCCCCTCACATATAAACTCTCTCTCCCACTCTCTATTTCTGATATATTCTTTTTTTTTTTTCAAAATTCTTTTAGTCTTCTTCTTTTCCTTTTTAAAATTTTAATTTAATTTTTTTTTTGGCTATTAGATGCAACAGTTTATGCTGGACTTGAATATACAGAGCAGTCGTGAGTTCCGAAGCTAATTGAAGGAAAATATATGCACATGATTATTTTCACTTTTTAAGAACCATCTGGTTTACATCAACATAATATTCTTAAATATATGATGTTTTCCTCCTACTGTTTAATGGACGAATTTATTTTATTAATCACAATTACAACACATCTAGAAATCCTTGAGTTTCTTT TTAGAGACGGGTTTGAAAGGAAACTGAAGTCCGTCGTTGTTTTGCGTTGGACATCGTGAAATCGCCGTTTCTTAAGGCTTTGAATTTGATGCTCTCTTCAGAGTTGCATTCAACCTAAGCTGGGGGAGATCAATCAAGATGACGAAATGGAGTTTCTTGATTTCCATTCTTTTGGGCCTCATGTTCACCTTTGCTGATTCGATGCGGTTCGATCTTCAATCGGGCGCCACCAAATGCATTTCCGATGACATCAAGACCAATGCCATGACCGTCGGCAAATATTCGGTGGCTAGTCTCAACGAAGGTGCTCCCATTCCCGATTCTCACAAGCTCACTGTCAGGGTCAGTTCGCCTAACGGCAACACGTATCACAATGCGGATCATGTGGAATCTGGACATTTCGCGTTCACTGCAGCCGAGTCTGGTGATTATACTACTTGCTTTTGGGCTCCAGAACAAAAGCCTCCAGGTTCAGTTACAGTTGAATTTGATTGGAGGTCTGGTGTTTCTTCTAAGGATTGGTCCAAGGTTGCTAAGAAAGGCCAGGTTGAAGTAATGGAATTTGAGTTGAAGAAGTTGTATGACACAGTCGTCTCCATACATGATGAGATGTTTTATCTCCGTGAAAGAGAGGAGGAAATGCAGCAACTGAATAGATCAACAAATGCAAAGATGGCCACCTTTAGTATCCTATCACTTGGAGTTTGCTTGTCTGTGGCTGGTTTACAGTTATGGCATCTCAAGACATTCTTTGAACGCAAGAAGTTGCTGTGATTTTTCCCCTCACATATAAACTCTCTCTCCCACTCTCTATTTCTGATATATTCTTTTTTTTTTTTCAAAATTCTTTTAGTCTTCTTCTTTTCCTTTTTAAAATTTTAATTTAATTTTTTTTTTGGCTATTAGATGCAACAGTTTATGCTGGACTTGAATATACAGAGCAGTCGTGAGTTCCGAAGCTAATTGAAGGAAAATATATGCACATGATTATTTTCACTTTTTAAGAACCATCTGGTTTACATCAACATAATATTCTTAAATATATGATGTTTTCCTCCTACTGTTTAATGGACGAATTTATTTTATTAATCACAATTACAACACATCTAGAAATCCTTGAGTTTCTTT ATGACGAAATGGAGTTTCTTGATTTCCATTCTTTTGGGCCTCATGTTCACCTTTGCTGATTCGATGCGGTTCGATCTTCAATCGGGCGCCACCAAATGCATTTCCGATGACATCAAGACCAATGCCATGACCGTCGGCAAATATTCGGTGGCTAGTCTCAACGAAGGTGCTCCCATTCCCGATTCTCACAAGCTCACTGTCAGGGTCAGTTCGCCTAACGGCAACACGTATCACAATGCGGATCATGTGGAATCTGGACATTTCGCGTTCACTGCAGCCGAGTCTGGTGATTATACTACTTGCTTTTGGGCTCCAGAACAAAAGCCTCCAGGTTCAGTTACAGTTGAATTTGATTGGAGGTCTGGTGTTTCTTCTAAGGATTGGTCCAAGGTTGCTAAGAAAGGCCAGGTTGAAGTAATGGAATTTGAGTTGAAGAAGTTGTATGACACAGTCGTCTCCATACATGATGAGATGTTTTATCTCCGTGAAAGAGAGGAGGAAATGCAGCAACTGAATAGATCAACAAATGCAAAGATGGCCACCTTTAGTATCCTATCACTTGGAGTTTGCTTGTCTGTGGCTGGTTTACAGTTATGGCATCTCAAGACATTCTTTGAACGCAAGAAGTTGCTGTGA MTKWSFLISILLGLMFTFADSMRFDLQSGATKCISDDIKTNAMTVGKYSVASLNEGAPIPDSHKLTVRVSSPNGNTYHNADHVESGHFAFTAAESGDYTTCFWAPEQKPPGSVTVEFDWRSGVSSKDWSKVAKKGQVEVMEFELKKLYDTVVSIHDEMFYLREREEEMQQLNRSTNAKMATFSILSLGVCLSVAGLQLWHLKTFFERKKLL Homology
BLAST of Lsi02G014660 vs. ExPASy Swiss-Prot
Match: Q9LQY3 (Transmembrane emp24 domain-containing protein p24delta9 OS=Arabidopsis thaliana OX=3702 GN=At1g26690 PE=2 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 6.1e-69 Identity = 127/204 (62.25%), Postives = 162/204 (79.41%), Query Frame = 0
BLAST of Lsi02G014660 vs. ExPASy Swiss-Prot
Match: Q8GYG1 (Transmembrane emp24 domain-containing protein p24delta7 OS=Arabidopsis thaliana OX=3702 GN=At1g14010 PE=2 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 1.5e-67 Identity = 121/207 (58.45%), Postives = 161/207 (77.78%), Query Frame = 0
BLAST of Lsi02G014660 vs. ExPASy Swiss-Prot
Match: Q8VY92 (Transmembrane emp24 domain-containing protein p24delta10 OS=Arabidopsis thaliana OX=3702 GN=At1g69460 PE=1 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 1.8e-65 Identity = 118/208 (56.73%), Postives = 163/208 (78.37%), Query Frame = 0
BLAST of Lsi02G014660 vs. ExPASy Swiss-Prot
Match: O81045 (Transmembrane emp24 domain-containing protein p24delta8 OS=Arabidopsis thaliana OX=3702 GN=At2g03290 PE=1 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 1.1e-62 Identity = 116/208 (55.77%), Postives = 158/208 (75.96%), Query Frame = 0
BLAST of Lsi02G014660 vs. ExPASy Swiss-Prot
Match: Q9LJV9 (Transmembrane emp24 domain-containing protein p24delta11 OS=Arabidopsis thaliana OX=3702 GN=At3g29070 PE=2 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 1.9e-62 Identity = 116/205 (56.59%), Postives = 157/205 (76.59%), Query Frame = 0
BLAST of Lsi02G014660 vs. ExPASy TrEMBL
Match: A0A6J1JZ64 (transmembrane emp24 domain-containing protein p24delta7-like OS=Cucurbita maxima OX=3661 GN=LOC111489593 PE=3 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 7.4e-102 Identity = 187/211 (88.63%), Postives = 199/211 (94.31%), Query Frame = 0
BLAST of Lsi02G014660 vs. ExPASy TrEMBL
Match: A0A6J1FJ20 (transmembrane emp24 domain-containing protein p24delta7-like OS=Cucurbita moschata OX=3662 GN=LOC111444716 PE=3 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 2.2e-101 Identity = 186/211 (88.15%), Postives = 199/211 (94.31%), Query Frame = 0
BLAST of Lsi02G014660 vs. ExPASy TrEMBL
Match: A0A6J1BZT5 (transmembrane emp24 domain-containing protein p24delta9-like OS=Momordica charantia OX=3673 GN=LOC111006738 PE=3 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 8.2e-101 Identity = 181/211 (85.78%), Postives = 200/211 (94.79%), Query Frame = 0
BLAST of Lsi02G014660 vs. ExPASy TrEMBL
Match: A0A1S3CAG6 (transmembrane emp24 domain-containing protein p24delta9 OS=Cucumis melo OX=3656 GN=LOC103498505 PE=3 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 1.1e-100 Identity = 186/212 (87.74%), Postives = 197/212 (92.92%), Query Frame = 0
BLAST of Lsi02G014660 vs. ExPASy TrEMBL
Match: A0A5D3BN42 (Transmembrane emp24 domain-containing protein p24delta9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002690 PE=3 SV=1) HSP 1 Score: 373.6 bits (958), Expect = 5.3e-100 Identity = 185/212 (87.26%), Postives = 196/212 (92.45%), Query Frame = 0
BLAST of Lsi02G014660 vs. NCBI nr
Match: XP_038890728.1 (transmembrane emp24 domain-containing protein p24delta9-like [Benincasa hispida]) HSP 1 Score: 391.0 bits (1003), Expect = 6.7e-105 Identity = 193/211 (91.47%), Postives = 201/211 (95.26%), Query Frame = 0
BLAST of Lsi02G014660 vs. NCBI nr
Match: XP_023551023.1 (transmembrane emp24 domain-containing protein p24delta7-like [Cucurbita pepo subsp. pepo] >KAG6578566.1 Transmembrane emp24 domain-containing protein p24delta7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016124.1 Transmembrane emp24 domain-containing protein p24delta7 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 379.8 bits (974), Expect = 1.5e-101 Identity = 187/211 (88.63%), Postives = 199/211 (94.31%), Query Frame = 0
BLAST of Lsi02G014660 vs. NCBI nr
Match: XP_022993670.1 (transmembrane emp24 domain-containing protein p24delta7-like [Cucurbita maxima]) HSP 1 Score: 379.8 bits (974), Expect = 1.5e-101 Identity = 187/211 (88.63%), Postives = 199/211 (94.31%), Query Frame = 0
BLAST of Lsi02G014660 vs. NCBI nr
Match: XP_022938498.1 (transmembrane emp24 domain-containing protein p24delta7-like [Cucurbita moschata]) HSP 1 Score: 378.3 bits (970), Expect = 4.5e-101 Identity = 186/211 (88.15%), Postives = 199/211 (94.31%), Query Frame = 0
BLAST of Lsi02G014660 vs. NCBI nr
Match: XP_022134512.1 (transmembrane emp24 domain-containing protein p24delta9-like [Momordica charantia]) HSP 1 Score: 376.3 bits (965), Expect = 1.7e-100 Identity = 181/211 (85.78%), Postives = 200/211 (94.79%), Query Frame = 0
BLAST of Lsi02G014660 vs. TAIR 10
Match: AT1G26690.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 261.9 bits (668), Expect = 4.4e-70 Identity = 127/204 (62.25%), Postives = 162/204 (79.41%), Query Frame = 0
BLAST of Lsi02G014660 vs. TAIR 10
Match: AT1G14010.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 257.3 bits (656), Expect = 1.1e-68 Identity = 121/207 (58.45%), Postives = 161/207 (77.78%), Query Frame = 0
BLAST of Lsi02G014660 vs. TAIR 10
Match: AT1G69460.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 250.4 bits (638), Expect = 1.3e-66 Identity = 118/208 (56.73%), Postives = 163/208 (78.37%), Query Frame = 0
BLAST of Lsi02G014660 vs. TAIR 10
Match: AT2G03290.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 241.1 bits (614), Expect = 8.0e-64 Identity = 116/208 (55.77%), Postives = 158/208 (75.96%), Query Frame = 0
BLAST of Lsi02G014660 vs. TAIR 10
Match: AT3G29070.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 240.4 bits (612), Expect = 1.4e-63 Identity = 116/205 (56.59%), Postives = 157/205 (76.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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