Lsi02G014460 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G014460
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	tetraspanin-3-like
Location	chr02: 20129891 .. 20130181 (-)
RNA-Seq Expression	Lsi02G014460
Synteny	Lsi02G014460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGATTTTGGAGGAGGACTAGTAGGGGCAGCGCCTGATTGTGGAAGGTGGAGCAATGACCAAGACCAACTTTGCTATGCTTGTGACTCTTGCAAGGCTGGGGTTCTAGCTAGTCTCAAGAAGAGTTGGCGGAAGGTCTCCGTCATTAACATCATTGTCTTGATCATTCTTGTCATCTCTTACGTCGTTGGCTATGCAGCCTTTCGAAACAATCGTCGTATCGACAATGACGAACCTGCTAGCACTGCTCGTATGACCAAATCGAAACCGAGTTGGTTTAACATTTGA

mRNA sequence

ATGTGGGATTTTGGAGGAGGACTAGTAGGGGCAGCGCCTGATTGTGGAAGGTGGAGCAATGACCAAGACCAACTTTGCTATGCTTGTGACTCTTGCAAGGCTGGGGTTCTAGCTAGTCTCAAGAAGAGTTGGCGGAAGGTCTCCGTCATTAACATCATTGTCTTGATCATTCTTGTCATCTCTTACGTCGTTGGCTATGCAGCCTTTCGAAACAATCGTCGTATCGACAATGACGAACCTGCTAGCACTGCTCGTATGACCAAATCGAAACCGAGTTGGTTTAACATTTGA

Coding sequence (CDS)

ATGTGGGATTTTGGAGGAGGACTAGTAGGGGCAGCGCCTGATTGTGGAAGGTGGAGCAATGACCAAGACCAACTTTGCTATGCTTGTGACTCTTGCAAGGCTGGGGTTCTAGCTAGTCTCAAGAAGAGTTGGCGGAAGGTCTCCGTCATTAACATCATTGTCTTGATCATTCTTGTCATCTCTTACGTCGTTGGCTATGCAGCCTTTCGAAACAATCGTCGTATCGACAATGACGAACCTGCTAGCACTGCTCGTATGACCAAATCGAAACCGAGTTGGTTTAACATTTGA

Protein sequence

MWDFGGGLVGAAPDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVISYVVGYAAFRNNRRIDNDEPASTARMTKSKPSWFNI

Homology

[Close]

BLAST of Lsi02G014460 vs. ExPASy Swiss-Prot
Match: Q9M1E7 (Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 3.2e-33
Identity = 68/95 (71.58%), Postives = 76/95 (80.00%), Query Frame = 0


Query: 2   WDFGGGLVGAAPDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVIS 61
           WD  GG++G   DC  WSNDQ  LCY C SCKAGVL SLKKSWRKVSVINI+VLIILVI 
Sbjct: 191 WDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVINIVVLIILVIF 250

Query: 62  YVVGYAAFRNNRRIDNDEPASTARMTKSKPSWFNI 97
           YV+ YAA+RN +RIDNDEPA  ARMTKS PS F++
Sbjct: 251 YVIAYAAYRNVKRIDNDEPAGEARMTKSHPSHFHL 285

[Close]

BLAST of Lsi02G014460 vs. ExPASy Swiss-Prot
Match: Q9LSS4 (Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 8.5e-26
Identity = 57/87 (65.52%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 1   MWDFGGGLVGAAPDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVI 60
           +W  GG +VG  PDC  W+NDQ  LCY C SCKAGVL SLKKSWRKVSVINI+V+IILVI
Sbjct: 190 VWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINIVVVIILVI 249

Query: 61  SYVVGYAAFRNNRRIDNDEPASTARMT 88
            YV+  AA++N +R+ NDEP   ARMT
Sbjct: 250 FYVIACAAYQNVKRMYNDEPVGEARMT 276

[Close]

BLAST of Lsi02G014460 vs. ExPASy Swiss-Prot
Match: Q9C7C1 (Tetraspanin-6 OS=Arabidopsis thaliana OX=3702 GN=TET6 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.5e-17
Identity = 40/91 (43.96%), Postives = 57/91 (62.64%), Query Frame = 0


Query: 4   FGGGLVGAAPDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVISYV 63
           +  G+V    DC RW+N  + LCY CD+CKAGVL  ++  WRK+SV+NI+VL++L+  Y 
Sbjct: 176 YEAGVVDGGGDCFRWNNGVEMLCYECDACKAGVLEEIRLDWRKLSVVNILVLVLLIAVYA 235

Query: 64  VGYAAFRNNRRIDND-EPASTARMTKSKPSW 94
            G  AF N R   +   P+   RMT+ +P W
Sbjct: 236 AGCCAFHNTRHAAHPYHPSDDNRMTRVRPRW 266

[Close]

BLAST of Lsi02G014460 vs. ExPASy Swiss-Prot
Match: Q84WF6 (Tetraspanin-5 OS=Arabidopsis thaliana OX=3702 GN=TET5 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.0e-15
Identity = 37/82 (45.12%), Postives = 55/82 (67.07%), Query Frame = 0


Query: 13  PDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVISYVVGYAAFRNN 72
           PDC RW+N    LCY CD+C+AGVL ++++ W K+S++N+IV+I L+  Y VG  AF+N 
Sbjct: 186 PDCYRWNNAATVLCYDCDTCRAGVLETVRRDWHKLSLVNVIVVIFLIAVYCVGCCAFKNA 245

Query: 73  RRIDN-DEPASTARMTKSKPSW 94
           +R  +   P     M+KS+P W
Sbjct: 246 KRPQHYGFPYGRYGMSKSRPGW 267

[Close]

BLAST of Lsi02G014460 vs. ExPASy Swiss-Prot
Match: Q8S8Q6 (Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.0e-15
Identity = 33/65 (50.77%), Postives = 50/65 (76.92%), Query Frame = 0


Query: 13  PDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVISYVVGYAAFRNN 72
           PDC  W N +++LC+ C SCKAG+L ++K +W+KV+++NI+ L+ L+I Y VG  AFRNN
Sbjct: 200 PDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIVFLVFLIIVYSVGCCAFRNN 259

Query: 73  RRIDN 78
           +R D+
Sbjct: 260 KRDDS 264

[Close]

BLAST of Lsi02G014460 vs. ExPASy TrEMBL
Match: A0A1S3CJB4 (tetraspanin-3-like OS=Cucumis melo OX=3656 GN=LOC103501616 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.4e-47
Identity = 94/96 (97.92%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1   MWDFGGGLVGAAPDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVI 60
           MWDFGGGLVGA PDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVI
Sbjct: 190 MWDFGGGLVGAEPDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVI 249

Query: 61  SYVVGYAAFRNNRRIDNDEPASTARMTKSKPSWFNI 97
           SYV+GYAAFRNNRRIDNDEPASTARMTKSKPSWFNI
Sbjct: 250 SYVIGYAAFRNNRRIDNDEPASTARMTKSKPSWFNI 285

[Close]

BLAST of Lsi02G014460 vs. ExPASy TrEMBL
Match: A0A0A0LS61 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G089490 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.0e-45
Identity = 90/96 (93.75%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1   MWDFGGGLVGAAPDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVI 60
           MWDFGGGLVG  PDCGRWSNDQ QLCYACDSCKA VLASLKKSWRKVSVINII LIILVI
Sbjct: 190 MWDFGGGLVGGEPDCGRWSNDQRQLCYACDSCKAAVLASLKKSWRKVSVINIIALIILVI 249

Query: 61  SYVVGYAAFRNNRRIDNDEPASTARMTKSKPSWFNI 97
           SYV+GYAAFRNNRRIDNDEPASTARMTKSKPSWFNI
Sbjct: 250 SYVIGYAAFRNNRRIDNDEPASTARMTKSKPSWFNI 285

[Close]

BLAST of Lsi02G014460 vs. ExPASy TrEMBL
Match: A0A6J1KDR8 (tetraspanin-3-like OS=Cucurbita maxima OX=3661 GN=LOC111493409 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 5.5e-44
Identity = 84/95 (88.42%), Postives = 91/95 (95.79%), Query Frame = 0


Query: 2   WDFGGGLVGAAPDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVIS 61
           WD GGG+VG  PDCGRWSNDQDQLCYACDSCKAGVLA+LKKSWRKVSV+NIIVLI+LV+S
Sbjct: 191 WDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVNIIVLIVLVVS 250

Query: 62  YVVGYAAFRNNRRIDNDEPASTARMTKSKPSWFNI 97
           YV+GYAAFRNNRRIDNDEPASTARMTKSKP WFN+
Sbjct: 251 YVIGYAAFRNNRRIDNDEPASTARMTKSKPGWFNV 285

[Close]

BLAST of Lsi02G014460 vs. ExPASy TrEMBL
Match: A0A6J1G9E4 (tetraspanin-3-like OS=Cucurbita moschata OX=3662 GN=LOC111452174 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 7.9e-43
Identity = 82/95 (86.32%), Postives = 91/95 (95.79%), Query Frame = 0


Query: 2   WDFGGGLVGAAPDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVIS 61
           WD GGG+VG  PDCGRWSNDQDQLCYACDSCKAGVLA+LKKSWRKVSV+NIIVLI+LV+S
Sbjct: 191 WDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVNIIVLIVLVVS 250

Query: 62  YVVGYAAFRNNRRIDNDEPASTARMTKSKPSWFNI 97
           YV+GYAAFRNNRRIDN+EPASTARMTKSKP WF++
Sbjct: 251 YVIGYAAFRNNRRIDNNEPASTARMTKSKPGWFSV 285

[Close]

BLAST of Lsi02G014460 vs. ExPASy TrEMBL
Match: A0A6J1I2T9 (tetraspanin-3-like OS=Cucurbita maxima OX=3661 GN=LOC111469410 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.1e-41
Identity = 84/96 (87.50%), Postives = 88/96 (91.67%), Query Frame = 0


Query: 1   MWDFGGGLVGAAPDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVI 60
           +WD GGGLVG  PDC RWSNDQ QLCYACDSCKAGVLASLKKSWRKVSVINI+VLIILVI
Sbjct: 190 VWDVGGGLVGPEPDCARWSNDQHQLCYACDSCKAGVLASLKKSWRKVSVINIVVLIILVI 249

Query: 61  SYVVGYAAFRNNRRIDNDEPASTARMTKSKPSWFNI 97
           SYVVGYAAFRNNRR+DNDEPA +ARMTK KP WFNI
Sbjct: 250 SYVVGYAAFRNNRRMDNDEPAGSARMTKYKPRWFNI 285

[Close]

BLAST of Lsi02G014460 vs. NCBI nr
Match: XP_008463449.1 (PREDICTED: tetraspanin-3-like [Cucumis melo])

HSP 1 Score: 198.4 bits (503), Expect = 2.9e-47
Identity = 94/96 (97.92%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1   MWDFGGGLVGAAPDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVI 60
           MWDFGGGLVGA PDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVI
Sbjct: 190 MWDFGGGLVGAEPDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVI 249

Query: 61  SYVVGYAAFRNNRRIDNDEPASTARMTKSKPSWFNI 97
           SYV+GYAAFRNNRRIDNDEPASTARMTKSKPSWFNI
Sbjct: 250 SYVIGYAAFRNNRRIDNDEPASTARMTKSKPSWFNI 285

[Close]

BLAST of Lsi02G014460 vs. NCBI nr
Match: XP_038893969.1 (tetraspanin-3-like [Benincasa hispida])

HSP 1 Score: 196.1 bits (497), Expect = 1.4e-46
Identity = 94/96 (97.92%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 1   MWDFGGGLVGAAPDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVI 60
           MWDFGGGLVGA PDCGRWSNDQ QLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVI
Sbjct: 190 MWDFGGGLVGAEPDCGRWSNDQGQLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVI 249

Query: 61  SYVVGYAAFRNNRRIDNDEPASTARMTKSKPSWFNI 97
           SYVVGYAAFRNNRRIDNDEPASTARMTKSKPSWFNI
Sbjct: 250 SYVVGYAAFRNNRRIDNDEPASTARMTKSKPSWFNI 285

[Close]

BLAST of Lsi02G014460 vs. NCBI nr
Match: XP_004147271.1 (tetraspanin-3 [Cucumis sativus])

HSP 1 Score: 189.9 bits (481), Expect = 1.0e-44
Identity = 90/96 (93.75%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1   MWDFGGGLVGAAPDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVI 60
           MWDFGGGLVG  PDCGRWSNDQ QLCYACDSCKA VLASLKKSWRKVSVINII LIILVI
Sbjct: 190 MWDFGGGLVGGEPDCGRWSNDQRQLCYACDSCKAAVLASLKKSWRKVSVINIIALIILVI 249

Query: 61  SYVVGYAAFRNNRRIDNDEPASTARMTKSKPSWFNI 97
           SYV+GYAAFRNNRRIDNDEPASTARMTKSKPSWFNI
Sbjct: 250 SYVIGYAAFRNNRRIDNDEPASTARMTKSKPSWFNI 285

[Close]

BLAST of Lsi02G014460 vs. NCBI nr
Match: XP_022998885.1 (tetraspanin-3-like [Cucurbita maxima])

HSP 1 Score: 186.4 bits (472), Expect = 1.1e-43
Identity = 84/95 (88.42%), Postives = 91/95 (95.79%), Query Frame = 0


Query: 2   WDFGGGLVGAAPDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVIS 61
           WD GGG+VG  PDCGRWSNDQDQLCYACDSCKAGVLA+LKKSWRKVSV+NIIVLI+LV+S
Sbjct: 191 WDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVNIIVLIVLVVS 250

Query: 62  YVVGYAAFRNNRRIDNDEPASTARMTKSKPSWFNI 97
           YV+GYAAFRNNRRIDNDEPASTARMTKSKP WFN+
Sbjct: 251 YVIGYAAFRNNRRIDNDEPASTARMTKSKPGWFNV 285

[Close]

BLAST of Lsi02G014460 vs. NCBI nr
Match: XP_023521528.1 (tetraspanin-3-like [Cucurbita pepo subsp. pepo] >XP_023523592.1 tetraspanin-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 183.3 bits (464), Expect = 9.6e-43
Identity = 83/95 (87.37%), Postives = 90/95 (94.74%), Query Frame = 0


Query: 2   WDFGGGLVGAAPDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVIS 61
           WD GGG+VG  PDCGRWSNDQDQLCYACDSCKAGVLA+LKKSWRKVSV+NIIVLI+LVIS
Sbjct: 191 WDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVNIIVLIVLVIS 250

Query: 62  YVVGYAAFRNNRRIDNDEPASTARMTKSKPSWFNI 97
           YV+GYA FRNNRRIDN+EPASTARMTKSKP WFN+
Sbjct: 251 YVIGYATFRNNRRIDNNEPASTARMTKSKPGWFNV 285

[Close]

BLAST of Lsi02G014460 vs. TAIR 10
Match: AT3G45600.1 (tetraspanin3 )

HSP 1 Score: 142.1 bits (357), Expect = 2.3e-34
Identity = 68/95 (71.58%), Postives = 76/95 (80.00%), Query Frame = 0


Query: 2   WDFGGGLVGAAPDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVIS 61
           WD  GG++G   DC  WSNDQ  LCY C SCKAGVL SLKKSWRKVSVINI+VLIILVI 
Sbjct: 191 WDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVINIVVLIILVIF 250

Query: 62  YVVGYAAFRNNRRIDNDEPASTARMTKSKPSWFNI 97
           YV+ YAA+RN +RIDNDEPA  ARMTKS PS F++
Sbjct: 251 YVIAYAAYRNVKRIDNDEPAGEARMTKSHPSHFHL 285

[Close]

BLAST of Lsi02G014460 vs. TAIR 10
Match: AT5G60220.1 (tetraspanin4 )

HSP 1 Score: 117.5 bits (293), Expect = 6.0e-27
Identity = 57/87 (65.52%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 1   MWDFGGGLVGAAPDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVI 60
           +W  GG +VG  PDC  W+NDQ  LCY C SCKAGVL SLKKSWRKVSVINI+V+IILVI
Sbjct: 190 VWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINIVVVIILVI 249

Query: 61  SYVVGYAAFRNNRRIDNDEPASTARMT 88
            YV+  AA++N +R+ NDEP   ARMT
Sbjct: 250 FYVIACAAYQNVKRMYNDEPVGEARMT 276

[Close]

BLAST of Lsi02G014460 vs. TAIR 10
Match: AT3G12090.1 (tetraspanin6 )

HSP 1 Score: 90.1 bits (222), Expect = 1.0e-18
Identity = 40/91 (43.96%), Postives = 57/91 (62.64%), Query Frame = 0


Query: 4   FGGGLVGAAPDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVISYV 63
           +  G+V    DC RW+N  + LCY CD+CKAGVL  ++  WRK+SV+NI+VL++L+  Y 
Sbjct: 176 YEAGVVDGGGDCFRWNNGVEMLCYECDACKAGVLEEIRLDWRKLSVVNILVLVLLIAVYA 235

Query: 64  VGYAAFRNNRRIDND-EPASTARMTKSKPSW 94
            G  AF N R   +   P+   RMT+ +P W
Sbjct: 236 AGCCAFHNTRHAAHPYHPSDDNRMTRVRPRW 266

[Close]

BLAST of Lsi02G014460 vs. TAIR 10
Match: AT4G23410.1 (tetraspanin5 )

HSP 1 Score: 82.4 bits (202), Expect = 2.2e-16
Identity = 37/82 (45.12%), Postives = 55/82 (67.07%), Query Frame = 0


Query: 13  PDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVISYVVGYAAFRNN 72
           PDC RW+N    LCY CD+C+AGVL ++++ W K+S++N+IV+I L+  Y VG  AF+N 
Sbjct: 186 PDCYRWNNAATVLCYDCDTCRAGVLETVRRDWHKLSLVNVIVVIFLIAVYCVGCCAFKNA 245

Query: 73  RRIDN-DEPASTARMTKSKPSW 94
           +R  +   P     M+KS+P W
Sbjct: 246 KRPQHYGFPYGRYGMSKSRPGW 267

[Close]

BLAST of Lsi02G014460 vs. TAIR 10
Match: AT2G23810.1 (tetraspanin8 )

HSP 1 Score: 82.0 bits (201), Expect = 2.8e-16
Identity = 33/65 (50.77%), Postives = 50/65 (76.92%), Query Frame = 0


Query: 13  PDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVINIIVLIILVISYVVGYAAFRNN 72
           PDC  W N +++LC+ C SCKAG+L ++K +W+KV+++NI+ L+ L+I Y VG  AFRNN
Sbjct: 200 PDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIVFLVFLIIVYSVGCCAFRNN 259

Query: 73  RRIDN 78
           +R D+
Sbjct: 260 KRDDS 264

The following BLAST results are available for this feature:

BLAST of Lsi02G014460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1E7	3.2e-33	71.58	Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1	[more]
Q9LSS4	8.5e-26	65.52	Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1	[more]
Q9C7C1	1.5e-17	43.96	Tetraspanin-6 OS=Arabidopsis thaliana OX=3702 GN=TET6 PE=2 SV=1	[more]
Q84WF6	3.0e-15	45.12	Tetraspanin-5 OS=Arabidopsis thaliana OX=3702 GN=TET5 PE=2 SV=1	[more]
Q8S8Q6	4.0e-15	50.77	Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1	[more]

BLAST of Lsi02G014460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CJB4	1.4e-47	97.92	tetraspanin-3-like OS=Cucumis melo OX=3656 GN=LOC103501616 PE=4 SV=1	[more]
A0A0A0LS61	5.0e-45	93.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G089490 PE=4 SV=1	[more]
A0A6J1KDR8	5.5e-44	88.42	tetraspanin-3-like OS=Cucurbita maxima OX=3661 GN=LOC111493409 PE=4 SV=1	[more]
A0A6J1G9E4	7.9e-43	86.32	tetraspanin-3-like OS=Cucurbita moschata OX=3662 GN=LOC111452174 PE=4 SV=1	[more]
A0A6J1I2T9	1.1e-41	87.50	tetraspanin-3-like OS=Cucurbita maxima OX=3661 GN=LOC111469410 PE=3 SV=1	[more]

BLAST of Lsi02G014460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463449.1	2.9e-47	97.92	PREDICTED: tetraspanin-3-like [Cucumis melo]	[more]
XP_038893969.1	1.4e-46	97.92	tetraspanin-3-like [Benincasa hispida]	[more]
XP_004147271.1	1.0e-44	93.75	tetraspanin-3 [Cucumis sativus]	[more]
XP_022998885.1	1.1e-43	88.42	tetraspanin-3-like [Cucurbita maxima]	[more]
XP_023521528.1	9.6e-43	87.37	tetraspanin-3-like [Cucurbita pepo subsp. pepo] >XP_023523592.1 tetraspanin-3-li...	[more]

BLAST of Lsi02G014460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G45600.1	2.3e-34	71.58	tetraspanin3	[more]
AT5G60220.1	6.0e-27	65.52	tetraspanin4	[more]
AT3G12090.1	1.0e-18	43.96	tetraspanin6	[more]
AT4G23410.1	2.2e-16	45.12	tetraspanin5	[more]
AT2G23810.1	2.8e-16	50.77	tetraspanin8	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR32191:SF77	TETRASPANIN-3-LIKE	coord: 1..90
IPR044991	Tetraspani, plant	PANTHER	PTHR32191	TETRASPANIN-8-RELATED	coord: 1..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G014460.1	Lsi02G014460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0022857	transmembrane transporter activity