Lsi02G013650 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G013650
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	WUSCHEL-related homeobox like
Location	chr02: 18450158 .. 18451403 (-)
RNA-Seq Expression	Lsi02G013650
Synteny	Lsi02G013650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGGCGGCGGAGACGGGCGGCGGGGGCGGTGGTCCACCGGTGAGTTCACGGTGGAATCCGACAAAAGAGCAAATAAGTATATTGGAGAATTTGTACAGACAAGGAGTGAGAACTCCGAGTGCTGACCAAATACAACAGATAACGAGTAGGCTTAAAGCTTATGGTCATATTGAAGGCAAAAATGTGTTCTATTGGTTTCAGAATCATAAAGCTAGACAAAGGCAGAAGCAAAAACAACATTCCACTTTCCCTTTTTTTAATCACTTTCTTCACTTCAATCACAACTCTCCTTTCTCTCCTCCAAACGGTATGTACGTTAGTTTAACTATGTTCGCTTTTTATTATGGTAAAATGTTTTAACAATCTTTTCTTTTGAATACTACTTTGTTTTTTCAACTCAATTGGCATATGATTAGTATGCTAGAAACCACAAGGTCTATCATTTGAATCTCTCTAGCTATCCCAATTATACTCGAGAAAAAATATTAATAAATTCAACCCTAACCCATTAGGTTAATTTTGTTGGGTCTAATTCTAATTTCCAAAATCTAAAGGTCATCCTATTACATTATTTGGTTTTCTTTTAGATTTATGTTTATTTTCTCCTTTATTTGATTTCTTAGTAAAGATTTTTAGTTTTTACGATTTTGGTAGGAATTTTGAAAATATGTTTAGAAGGAGCTTTATTTTAAAAAATTGAAAATTAAATGTAAATGTTTGAATATTGTAATGTTATTTGTTGATGATAATCACTAAGCCTATATAGTGTTTAAATGAAATGAAGTTTACTTCTTATTGATTATCTTAAACTTTTTTTTATGTACAATTGTAATGGAATTATTTATTAATATAAAATTTTATTGTTTTTGTTTATTACTATGAATGATCAGTGGTTTGCAGCCCATACTACGTACATCAAAACGACGTCGGATTATATCCACAGTACCAAAACAATTCGATGGTGATTCAAAGCAGTGGGATTGTGAAGAGAAGATCAAAGAGTGAGAGAAGAAATTGTAATAATAATAATAATAATATTAATGAGGAATCCGCCATTAATAATAACCTTAGCTTTCAGAGTACCGAAACTCTCTCTCTCTTTCCCACGCACCCAACTGGGGATTTACAAGCTGCCCCACTGTCACTGTCACCGCCGCAGCCGATGGCGCCCGGTTCAGCCTCTTCTGAATACTCTACCGACGATTCTGCTGGCGGCTGTCGACCGTACTTTGAATTTTTTATGTAG

mRNA sequence

ACGGCGGCGGAGACGGGCGGCGGGGGCGGTGGTCCACCGGTGAGTTCACGGTGGAATCCGACAAAAGAGCAAATAAGTATATTGGAGAATTTGTACAGACAAGGAGTGAGAACTCCGAGTGCTGACCAAATACAACAGATAACGAGTAGGCTTAAAGCTTATGGTCATATTGAAGGCAAAAATGTGTTCTATTGGTTTCAGAATCATAAAGCTAGACAAAGGCAGAAGCAAAAACAACATTCCACTTTCCCTTTTTTTAATCACTTTCTTCACTTCAATCACAACTCTCCTTTCTCTCCTCCAAACGTGGTTTGCAGCCCATACTACGTACATCAAAACGACGTCGGATTATATCCACAGTACCAAAACAATTCGATGGTGATTCAAAGCAGTGGGATTGTGAAGAGAAGATCAAAGAGTGAGAGAAGAAATTGTAATAATAATAATAATAATATTAATGAGGAATCCGCCATTAATAATAACCTTAGCTTTCAGAGTACCGAAACTCTCTCTCTCTTTCCCACGCACCCAACTGGGGATTTACAAGCTGCCCCACTGTCACTGTCACCGCCGCAGCCGATGGCGCCCGGTTCAGCCTCTTCTGAATACTCTACCGACGATTCTGCTGGCGGCTGTCGACCGTACTTTGAATTTTTTATGTAG

Coding sequence (CDS)

ACGGCGGCGGAGACGGGCGGCGGGGGCGGTGGTCCACCGGTGAGTTCACGGTGGAATCCGACAAAAGAGCAAATAAGTATATTGGAGAATTTGTACAGACAAGGAGTGAGAACTCCGAGTGCTGACCAAATACAACAGATAACGAGTAGGCTTAAAGCTTATGGTCATATTGAAGGCAAAAATGTGTTCTATTGGTTTCAGAATCATAAAGCTAGACAAAGGCAGAAGCAAAAACAACATTCCACTTTCCCTTTTTTTAATCACTTTCTTCACTTCAATCACAACTCTCCTTTCTCTCCTCCAAACGTGGTTTGCAGCCCATACTACGTACATCAAAACGACGTCGGATTATATCCACAGTACCAAAACAATTCGATGGTGATTCAAAGCAGTGGGATTGTGAAGAGAAGATCAAAGAGTGAGAGAAGAAATTGTAATAATAATAATAATAATATTAATGAGGAATCCGCCATTAATAATAACCTTAGCTTTCAGAGTACCGAAACTCTCTCTCTCTTTCCCACGCACCCAACTGGGGATTTACAAGCTGCCCCACTGTCACTGTCACCGCCGCAGCCGATGGCGCCCGGTTCAGCCTCTTCTGAATACTCTACCGACGATTCTGCTGGCGGCTGTCGACCGTACTTTGAATTTTTTATGTAG

Protein sequence

TAAETGGGGGGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITSRLKAYGHIEGKNVFYWFQNHKARQRQKQKQHSTFPFFNHFLHFNHNSPFSPPNVVCSPYYVHQNDVGLYPQYQNNSMVIQSSGIVKRRSKSERRNCNNNNNNINEESAINNNLSFQSTETLSLFPTHPTGDLQAAPLSLSPPQPMAPGSASSEYSTDDSAGGCRPYFEFFM

Homology

[Close]

BLAST of Lsi02G013650 vs. ExPASy Swiss-Prot
Match: Q6X7K1 (WUSCHEL-related homeobox 2 OS=Arabidopsis thaliana OX=3702 GN=WOX2 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.6e-32
Identity = 101/241 (41.91%), Postives = 128/241 (53.11%), Query Frame = 0


Query: 11  GPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITSRLKAYGHIEGKNVFYWFQNHK 70
           G   SSRWNPTK+QI++LENLY++G+RTPSADQIQQIT RL+AYGHIEGKNVFYWFQNHK
Sbjct: 8   GTASSSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHK 67

Query: 71  ARQRQKQKQHSTFPFFNHFLHFNHNSPFSPP--NVVC-SPYYV------HQNDVG-LYPQ 130
           ARQRQKQKQ     +FN  LH      + PP  NV C SPYY+      H N  G +Y  
Sbjct: 68  ARQRQKQKQ-ERMAYFNRLLHKTSRFFYPPPCSNVGCVSPYYLQQASDHHMNQHGSVYTN 127

Query: 131 --YQNNSMVIQSSGIVKRRSKSERRNCNNNNNNINEESAINN------------------ 190
                N+++I S G  KR     ++  ++          I+                   
Sbjct: 128 DLLHRNNVMIPSGGYEKRTVTQHQKQLSDIRTTAATRMPISPSSLRFDRFALRDNCYAGE 187

Query: 191 --NLSFQSTETLSLFPTHPTGDLQAAPLSLSPPQPMAPGSASSEYSTDDSAGGCRPYFEF 220
             N++    +TL LFP  P     A  +  S     A GS S    + D AG  +P+ +F
Sbjct: 188 DINVNSSGRKTLPLFPLQPLNASNADGMGSS---SFALGSDSPVDCSSDGAGREQPFIDF 244

[Close]

BLAST of Lsi02G013650 vs. ExPASy Swiss-Prot
Match: A2WWU7 (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica OX=39946 GN=WOX5 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-26
Identity = 65/111 (58.56%), Postives = 77/111 (69.37%), Query Frame = 0


Query: 1   TAAETGGGGGG-------------PPVS-----------SRWNPTKEQISILENLYRQGV 60
           T    GGGGGG             PP+S           +RW PTKEQI++LE LYRQG+
Sbjct: 4   TTTTLGGGGGGRAGGFSDPPSPLSPPLSPASAAAAALANARWTPTKEQIAVLEGLYRQGL 63

Query: 61  RTPSADQIQQITSRLKAYGHIEGKNVFYWFQNHKARQRQKQKQHSTFPFFN 88
           RTP+A+QIQQIT+RL+ +GHIEGKNVFYWFQNHKARQRQKQKQ S F +F+
Sbjct: 64  RTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQRQKQKQQS-FDYFS 113

[Close]

BLAST of Lsi02G013650 vs. ExPASy Swiss-Prot
Match: Q8LR86 (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX5 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-26
Identity = 65/111 (58.56%), Postives = 77/111 (69.37%), Query Frame = 0


Query: 1   TAAETGGGGGG-------------PPVS-----------SRWNPTKEQISILENLYRQGV 60
           T    GGGGGG             PP+S           +RW PTKEQI++LE LYRQG+
Sbjct: 4   TTTTLGGGGGGRAGGFSDPPSPLSPPLSPASAAAAALANARWTPTKEQIAVLEGLYRQGL 63

Query: 61  RTPSADQIQQITSRLKAYGHIEGKNVFYWFQNHKARQRQKQKQHSTFPFFN 88
           RTP+A+QIQQIT+RL+ +GHIEGKNVFYWFQNHKARQRQKQKQ S F +F+
Sbjct: 64  RTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQRQKQKQQS-FDYFS 113

[Close]

BLAST of Lsi02G013650 vs. ExPASy Swiss-Prot
Match: Q6X7K0 (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2)

HSP 1 Score: 112.1 bits (279), Expect = 8.2e-24
Identity = 51/70 (72.86%), Postives = 61/70 (87.14%), Query Frame = 0


Query: 12  PP--VSSRWNPTKEQISILENLYRQGVRTPSADQIQQITSRLKAYGHIEGKNVFYWFQNH 71
           PP  VSSRWNPT +Q+ +LE LYRQG RTPSAD IQQIT++L+ YG IEGKNVFYWFQNH
Sbjct: 69  PPVMVSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNH 128

Query: 72  KARQRQKQKQ 80
           KAR+RQK+++
Sbjct: 129 KARERQKRRR 138

[Close]

BLAST of Lsi02G013650 vs. ExPASy Swiss-Prot
Match: Q6X7J9 (WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-20
Identity = 71/175 (40.57%), Postives = 93/175 (53.14%), Query Frame = 0


Query: 13  PVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITSRLKAYGHIEGKNVFYWFQNHKAR 72
           P  +RWNPT+EQI ILE LY+ G+RTP+A QI+ IT +L  YG IEGKNVFYWFQNHKAR
Sbjct: 86  PGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKAR 145

Query: 73  QRQKQKQHSTFPFFNHFLHFNHNSPFSP-----PNVVCSPYYVHQNDVGLYPQYQNNSMV 132
           +RQKQK+       N+ +  +  S F+      P+V          D+   P  +   +V
Sbjct: 146 ERQKQKR-------NNLISLSCQSSFTTTGVFNPSVTMKTRTSSSLDIMREPMVEKEELV 205

Query: 133 IQSSGIVKRRSKS---ERRNCNNNNNNINEESAINNNLSFQSTETLSLFPTHPTG 180
            ++    KR  +S   E     N  N  +   A   N    +  TL LFP HP G
Sbjct: 206 EENE--YKRTCRSWGFENLEIENRRNKNSSTMATTFNKIIDNV-TLELFPLHPEG 250

[Close]

BLAST of Lsi02G013650 vs. ExPASy TrEMBL
Match: A0A0A0LVA9 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G505930 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 2.2e-88
Identity = 184/231 (79.65%), Postives = 191/231 (82.68%), Query Frame = 0


Query: 6   GGGGGGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITSRLKAYGHIEGKNVFYW 65
           GGGGGGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQIT RLK YGHIEGKNVFYW
Sbjct: 13  GGGGGGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYW 72

Query: 66  FQNHKARQRQKQKQ-------HSTFPFFNHFLHFNH-NSPFSPP-------NVVCSPYYV 125
           FQNHKARQRQKQKQ       +S+FPFFNHFLHFNH NSPF PP       NVVCSPYYV
Sbjct: 73  FQNHKARQRQKQKQQHHHHHFNSSFPFFNHFLHFNHNNSPFPPPPPPPPPNNVVCSPYYV 132

Query: 126 HQNDVGLYPQYQNNSMVIQSSGIVKRRSKSERRNCNNNNNNINEESAIN-NNLSFQSTET 185
           HQNDVGLYPQYQNNSMVIQS GI  +RSKSERRNC     NINEES IN NNLS+Q+TET
Sbjct: 133 HQNDVGLYPQYQNNSMVIQSGGIETKRSKSERRNC---IININEESTINDNNLSYQTTET 192

Query: 186 LSLFPTHPTGDLQAAPLSLSPPQPMAPGSASSEYSTDDSAGGCRPYFEFFM 221
           LSLFPTHPTGDLQA+P S  PP  M P SAS E S DDSA G +PYFEFFM
Sbjct: 193 LSLFPTHPTGDLQASPQS-PPPPSMVPTSASDEISVDDSAHGRQPYFEFFM 239

[Close]

BLAST of Lsi02G013650 vs. ExPASy TrEMBL
Match: A0A6J1E0T1 (WUSCHEL-related homeobox 2 OS=Momordica charantia OX=3673 GN=LOC111025366 PE=3 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 4.4e-65
Identity = 147/216 (68.06%), Postives = 158/216 (73.15%), Query Frame = 0


Query: 10  GGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITSRLKAYGHIEGKNVFYWFQNH 69
           GG P SSRWNPTKEQI ILENLY+QGVRTPSADQI +IT+ LKAYGHIEGKNVFYWFQNH
Sbjct: 12  GGAPASSRWNPTKEQIGILENLYKQGVRTPSADQIHEITNSLKAYGHIEGKNVFYWFQNH 71

Query: 70  KARQRQKQKQHSTFPFFNHFLHFNHNSPFSPPNVVCSPYYVHQNDVGLYPQYQNNSMVIQ 129
           KARQRQKQKQ S    F+HFLHFN N P+S PNV CSPYYVHQNDVGLYP Y NNS  +Q
Sbjct: 72  KARQRQKQKQQS-LALFSHFLHFNSN-PYSSPNVGCSPYYVHQNDVGLYPPYHNNSKALQ 131

Query: 130 SSGIVKRRSKSERRNCNNNNNNINEESAINNNLSFQSTETLSLFPTHPTGDLQAAPLSLS 189
           SSGI +RRSKSERRN N       E SAIN N+    TETLSLFPTHPTGDLQ  PL   
Sbjct: 132 SSGIARRRSKSERRNSNGE----IEVSAINLNI---QTETLSLFPTHPTGDLQVGPL--- 191

Query: 190 PPQPMAPGSASSEYSTDDSAGGCR-----PYFEFFM 221
           PP        SSE S D S+ G        YF+FF+
Sbjct: 192 PP-------TSSETSADHSSAGVSSSGRGTYFDFFL 208

[Close]

BLAST of Lsi02G013650 vs. ExPASy TrEMBL
Match: A0A6J1KD41 (WUSCHEL-related homeobox 2-like OS=Cucurbita maxima OX=3661 GN=LOC111493249 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 2.3e-61
Identity = 142/218 (65.14%), Postives = 159/218 (72.94%), Query Frame = 0


Query: 10  GGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITSRLKAYGHIEGKNVFYWFQNH 69
           GG PVSSRWNPTKEQISILENLY QGVRTPSA+QIQQIT+RLK+YGHIEGKNVFYWFQNH
Sbjct: 8   GGTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNH 67

Query: 70  KARQRQKQKQH--STFPFFNHFLHFNHNSP-FSPPNVVCSPYYVHQNDVGLYPQYQNNSM 129
           KARQRQKQKQ   +T  +FNHFL     +P F  PNVVCSPYYVHQN+VG+YP  Q+NS 
Sbjct: 68  KARQRQKQKQDHTATLAYFNHFLPLPPFAPHFPSPNVVCSPYYVHQNNVGVYPHQQSNS- 127

Query: 130 VIQSSGIVKRRSKSERRNCNNNNNNINEESAINNNLSFQSTETLSLFPTHPTGDLQAAPL 189
                    RRS SERR+C  NN     +S   +N    +T+TL LFPTHPTGDLQ  P 
Sbjct: 128 -------TTRRSNSERRSC-TNNPGFGYQSCQTDN---PATQTLPLFPTHPTGDLQVGPP 187

Query: 190 SLS--PPQPMAPGSASSE--YSTDDSAGGCRPYFEFFM 221
             S  PPQ MA  SASS    S D+S+GGCR YFEFF+
Sbjct: 188 PPSPLPPQAMASASASSSSGMSADESSGGCRTYFEFFL 213

[Close]

BLAST of Lsi02G013650 vs. ExPASy TrEMBL
Match: A0A5J5C598 (Homeobox domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_000934 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.1e-44
Identity = 120/233 (51.50%), Postives = 147/233 (63.09%), Query Frame = 0


Query: 10  GGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITSRLKAYGHIEGKNVFYWFQNH 69
           GG P SSRWNPTKEQIS+LENLYRQG+RTPSA+QIQQITSRLKAYGHIEGKNVFYWFQNH
Sbjct: 12  GGAPASSRWNPTKEQISMLENLYRQGIRTPSAEQIQQITSRLKAYGHIEGKNVFYWFQNH 71

Query: 70  KARQRQKQKQHSTFPFFNHFLHFNHNSPFSP-PNVVCSPYYVHQNDVGLYPQYQNNSMVI 129
           KARQRQKQKQ +   +++ +LH N +  F P P VVCSPYY+ QND+G YP Y     V+
Sbjct: 72  KARQRQKQKQEN-MAYYSRYLH-NSSPVFPPCPTVVCSPYYLPQNDLGFYPHYPK---VL 131

Query: 130 QSSGIVKRRSKSE-----------------RRNCNNNNNNINEESAINNNLSFQSTETLS 189
              GI +R S  +                 R N   +      E+A+NNN +  S  TL 
Sbjct: 132 LPGGIKRRPSPDKMEKTNTCVGAGYEPSHLRYNVMMHTAGDKNEAAMNNNCN-TSQATLP 191

Query: 190 LFPTHPTGDLQAAPLSLSPPQPMAPGSASSEYSTDDSAG-----GCRPYFEFF 220
           LFP  PTG LQA   + S     +  ++++  S+ D+ G     G +PYFEFF
Sbjct: 192 LFPLQPTGILQARTTNNSSLVSTSAENSTTPSSSSDTTGIEQRSGDQPYFEFF 238

[Close]

BLAST of Lsi02G013650 vs. ExPASy TrEMBL
Match: A0A438G1L6 (WUSCHEL-related homeobox 2 OS=Vitis vinifera OX=29760 GN=WOX2_1 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 1.5e-44
Identity = 116/228 (50.88%), Postives = 142/228 (62.28%), Query Frame = 0


Query: 9   GGGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITSRLKAYGHIEGKNVFYWFQN 68
           GGG P SSRWNPTKEQIS+LE+LY QG+RTPSA+QIQQIT RLKAYGHIEGKNVFYWFQN
Sbjct: 7   GGGAPASSRWNPTKEQISMLESLYMQGIRTPSAEQIQQITGRLKAYGHIEGKNVFYWFQN 66

Query: 69  HKARQRQKQKQHSTFPFFNHFLHFNHNSPFSP---PNVVCSPYYVHQNDVGLYPQYQNNS 128
           HKARQRQKQKQ +   + N +LH    SP  P   PNVVC PYYV Q+D+G YPQY    
Sbjct: 67  HKARQRQKQKQEN-MAYVNRYLH--KTSPLFPPPCPNVVCGPYYVPQSDLGFYPQYPK-- 126

Query: 129 MVIQSSGIVKRRSKSERRNCNNNNN------------NINEESAINNNLSFQSTETLSLF 188
             +   G ++RR ++ER      +               N E  IN++    + ETL+LF
Sbjct: 127 --VLLPGGIRRRPRTERAEKTKTHGGGGAGYEMMMQAGDNNEGLINSSSIDCNQETLALF 186

Query: 189 PTHPTGDLQAAPLSLSPPQPMAPGSASSEYSTDD-SAGGC-RPYFEFF 220
           P HPTGDLQ +    S        ++S   +T     G C +P+F+FF
Sbjct: 187 PLHPTGDLQRSHAETSAENSTTLSTSSETATTPGIEDGSCDQPFFDFF 227

[Close]

BLAST of Lsi02G013650 vs. NCBI nr
Match: KGN65708.1 (hypothetical protein Csa_019930 [Cucumis sativus])

HSP 1 Score: 335.1 bits (858), Expect = 4.5e-88
Identity = 184/231 (79.65%), Postives = 191/231 (82.68%), Query Frame = 0


Query: 6   GGGGGGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITSRLKAYGHIEGKNVFYW 65
           GGGGGGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQIT RLK YGHIEGKNVFYW
Sbjct: 13  GGGGGGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYW 72

Query: 66  FQNHKARQRQKQKQ-------HSTFPFFNHFLHFNH-NSPFSPP-------NVVCSPYYV 125
           FQNHKARQRQKQKQ       +S+FPFFNHFLHFNH NSPF PP       NVVCSPYYV
Sbjct: 73  FQNHKARQRQKQKQQHHHHHFNSSFPFFNHFLHFNHNNSPFPPPPPPPPPNNVVCSPYYV 132

Query: 126 HQNDVGLYPQYQNNSMVIQSSGIVKRRSKSERRNCNNNNNNINEESAIN-NNLSFQSTET 185
           HQNDVGLYPQYQNNSMVIQS GI  +RSKSERRNC     NINEES IN NNLS+Q+TET
Sbjct: 133 HQNDVGLYPQYQNNSMVIQSGGIETKRSKSERRNC---IININEESTINDNNLSYQTTET 192

Query: 186 LSLFPTHPTGDLQAAPLSLSPPQPMAPGSASSEYSTDDSAGGCRPYFEFFM 221
           LSLFPTHPTGDLQA+P S  PP  M P SAS E S DDSA G +PYFEFFM
Sbjct: 193 LSLFPTHPTGDLQASPQS-PPPPSMVPTSASDEISVDDSAHGRQPYFEFFM 239

[Close]

BLAST of Lsi02G013650 vs. NCBI nr
Match: XP_022158904.1 (WUSCHEL-related homeobox 2 [Momordica charantia])

HSP 1 Score: 257.7 bits (657), Expect = 9.2e-65
Identity = 147/216 (68.06%), Postives = 158/216 (73.15%), Query Frame = 0


Query: 10  GGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITSRLKAYGHIEGKNVFYWFQNH 69
           GG P SSRWNPTKEQI ILENLY+QGVRTPSADQI +IT+ LKAYGHIEGKNVFYWFQNH
Sbjct: 12  GGAPASSRWNPTKEQIGILENLYKQGVRTPSADQIHEITNSLKAYGHIEGKNVFYWFQNH 71

Query: 70  KARQRQKQKQHSTFPFFNHFLHFNHNSPFSPPNVVCSPYYVHQNDVGLYPQYQNNSMVIQ 129
           KARQRQKQKQ S    F+HFLHFN N P+S PNV CSPYYVHQNDVGLYP Y NNS  +Q
Sbjct: 72  KARQRQKQKQQS-LALFSHFLHFNSN-PYSSPNVGCSPYYVHQNDVGLYPPYHNNSKALQ 131

Query: 130 SSGIVKRRSKSERRNCNNNNNNINEESAINNNLSFQSTETLSLFPTHPTGDLQAAPLSLS 189
           SSGI +RRSKSERRN N       E SAIN N+    TETLSLFPTHPTGDLQ  PL   
Sbjct: 132 SSGIARRRSKSERRNSNGE----IEVSAINLNI---QTETLSLFPTHPTGDLQVGPL--- 191

Query: 190 PPQPMAPGSASSEYSTDDSAGGCR-----PYFEFFM 221
           PP        SSE S D S+ G        YF+FF+
Sbjct: 192 PP-------TSSETSADHSSAGVSSSGRGTYFDFFL 208

[Close]

BLAST of Lsi02G013650 vs. NCBI nr
Match: XP_022998665.1 (WUSCHEL-related homeobox 2-like [Cucurbita maxima])

HSP 1 Score: 245.4 bits (625), Expect = 4.7e-61
Identity = 142/218 (65.14%), Postives = 159/218 (72.94%), Query Frame = 0


Query: 10  GGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITSRLKAYGHIEGKNVFYWFQNH 69
           GG PVSSRWNPTKEQISILENLY QGVRTPSA+QIQQIT+RLK+YGHIEGKNVFYWFQNH
Sbjct: 8   GGTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNH 67

Query: 70  KARQRQKQKQH--STFPFFNHFLHFNHNSP-FSPPNVVCSPYYVHQNDVGLYPQYQNNSM 129
           KARQRQKQKQ   +T  +FNHFL     +P F  PNVVCSPYYVHQN+VG+YP  Q+NS 
Sbjct: 68  KARQRQKQKQDHTATLAYFNHFLPLPPFAPHFPSPNVVCSPYYVHQNNVGVYPHQQSNS- 127

Query: 130 VIQSSGIVKRRSKSERRNCNNNNNNINEESAINNNLSFQSTETLSLFPTHPTGDLQAAPL 189
                    RRS SERR+C  NN     +S   +N    +T+TL LFPTHPTGDLQ  P 
Sbjct: 128 -------TTRRSNSERRSC-TNNPGFGYQSCQTDN---PATQTLPLFPTHPTGDLQVGPP 187

Query: 190 SLS--PPQPMAPGSASSE--YSTDDSAGGCRPYFEFFM 221
             S  PPQ MA  SASS    S D+S+GGCR YFEFF+
Sbjct: 188 PPSPLPPQAMASASASSSSGMSADESSGGCRTYFEFFL 213

[Close]

BLAST of Lsi02G013650 vs. NCBI nr
Match: XP_031742465.1 (WUSCHEL-related homeobox 2 [Cucumis sativus])

HSP 1 Score: 243.4 bits (620), Expect = 1.8e-60
Identity = 143/216 (66.20%), Postives = 148/216 (68.52%), Query Frame = 0


Query: 6   GGGGGGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITSRLKAYGHIEGKNVFYW 65
           GGGGGGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQIT RLK YGHIE       
Sbjct: 13  GGGGGGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIE------- 72

Query: 66  FQNHKARQRQKQKQHSTFPFFNHFLHFNHNSPFSPPNVVCSPYYVHQNDVGLYPQYQNNS 125
                                                VVCSPYYVHQNDVGLYPQYQNNS
Sbjct: 73  -------------------------------------VVCSPYYVHQNDVGLYPQYQNNS 132

Query: 126 MVIQSSGIVKRRSKSERRNCNNNNNNINEESAIN-NNLSFQSTETLSLFPTHPTGDLQAA 185
           MVIQS GI  +RSKSERRNC     NINEES IN NNLS+Q+TETLSLFPTHPTGDLQA+
Sbjct: 133 MVIQSGGIETKRSKSERRNC---IININEESTINDNNLSYQTTETLSLFPTHPTGDLQAS 180

Query: 186 PLSLSPPQPMAPGSASSEYSTDDSAGGCRPYFEFFM 221
           P S  PP  M P SAS E S DDSA G +PYFEFFM
Sbjct: 193 PQS-PPPPSMVPTSASDEISVDDSAHGRQPYFEFFM 180

[Close]

BLAST of Lsi02G013650 vs. NCBI nr
Match: KAG6607233.1 (Inner membrane protein ALBINO3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 241.1 bits (614), Expect = 8.9e-60
Identity = 143/220 (65.00%), Postives = 159/220 (72.27%), Query Frame = 0


Query: 10  GGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITSRLKAYGHIEGKNVFYWFQNH 69
           GG PVSSRWNPTKEQISILENLY QGVRTPSA+QIQQIT+RLK+YGHIEGKNVFYWFQNH
Sbjct: 8   GGTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNH 67

Query: 70  KARQRQKQKQ-HS-TFPFFNHFLHFNHNSP-FSPPNVVCSPYYVHQNDVGLYPQYQNNSM 129
           KARQRQKQKQ HS T  +FNHFL     SP F  PNVVCSPYYVHQN+VG+YPQ Q+NS 
Sbjct: 68  KARQRQKQKQDHSATLAYFNHFLPLPPFSPHFPSPNVVCSPYYVHQNNVGVYPQQQSNSK 127

Query: 130 VIQSSGIVKRRSKSERRNCNNNNNNINEESAINNNLSFQSTETLSLFPTHPTGDLQAA-P 189
           +        RRS         +N     +S  N+N    +T+TLSLFPTHPTGDLQA  P
Sbjct: 128 M--------RRS---------HNGGFGYQSCQNDN---PTTQTLSLFPTHPTGDLQAGPP 187

Query: 190 LSLSPPQP-----MAPGSASSEYSTDDSAGGCRPYFEFFM 221
            S SPP P      A  SASS  S D+S+GGCR YFEFF+
Sbjct: 188 PSPSPPPPHAEAATATASASSGMSADESSGGCRTYFEFFL 207

[Close]

BLAST of Lsi02G013650 vs. TAIR 10
Match: AT5G59340.1 (WUSCHEL related homeobox 2 )

HSP 1 Score: 141.0 bits (354), Expect = 1.2e-33
Identity = 101/241 (41.91%), Postives = 128/241 (53.11%), Query Frame = 0


Query: 11  GPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITSRLKAYGHIEGKNVFYWFQNHK 70
           G   SSRWNPTK+QI++LENLY++G+RTPSADQIQQIT RL+AYGHIEGKNVFYWFQNHK
Sbjct: 8   GTASSSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHK 67

Query: 71  ARQRQKQKQHSTFPFFNHFLHFNHNSPFSPP--NVVC-SPYYV------HQNDVG-LYPQ 130
           ARQRQKQKQ     +FN  LH      + PP  NV C SPYY+      H N  G +Y  
Sbjct: 68  ARQRQKQKQ-ERMAYFNRLLHKTSRFFYPPPCSNVGCVSPYYLQQASDHHMNQHGSVYTN 127

Query: 131 --YQNNSMVIQSSGIVKRRSKSERRNCNNNNNNINEESAINN------------------ 190
                N+++I S G  KR     ++  ++          I+                   
Sbjct: 128 DLLHRNNVMIPSGGYEKRTVTQHQKQLSDIRTTAATRMPISPSSLRFDRFALRDNCYAGE 187

Query: 191 --NLSFQSTETLSLFPTHPTGDLQAAPLSLSPPQPMAPGSASSEYSTDDSAGGCRPYFEF 220
             N++    +TL LFP  P     A  +  S     A GS S    + D AG  +P+ +F
Sbjct: 188 DINVNSSGRKTLPLFPLQPLNASNADGMGSS---SFALGSDSPVDCSSDGAGREQPFIDF 244

[Close]

BLAST of Lsi02G013650 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 )

HSP 1 Score: 112.1 bits (279), Expect = 5.8e-25
Identity = 51/70 (72.86%), Postives = 61/70 (87.14%), Query Frame = 0


Query: 12  PP--VSSRWNPTKEQISILENLYRQGVRTPSADQIQQITSRLKAYGHIEGKNVFYWFQNH 71
           PP  VSSRWNPT +Q+ +LE LYRQG RTPSAD IQQIT++L+ YG IEGKNVFYWFQNH
Sbjct: 69  PPVMVSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNH 128

Query: 72  KARQRQKQKQ 80
           KAR+RQK+++
Sbjct: 129 KARERQKRRR 138

[Close]

BLAST of Lsi02G013650 vs. TAIR 10
Match: AT1G46480.1 (WUSCHEL related homeobox 4 )

HSP 1 Score: 101.7 bits (252), Expect = 7.9e-22
Identity = 71/175 (40.57%), Postives = 93/175 (53.14%), Query Frame = 0


Query: 13  PVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITSRLKAYGHIEGKNVFYWFQNHKAR 72
           P  +RWNPT+EQI ILE LY+ G+RTP+A QI+ IT +L  YG IEGKNVFYWFQNHKAR
Sbjct: 86  PGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKAR 145

Query: 73  QRQKQKQHSTFPFFNHFLHFNHNSPFSP-----PNVVCSPYYVHQNDVGLYPQYQNNSMV 132
           +RQKQK+       N+ +  +  S F+      P+V          D+   P  +   +V
Sbjct: 146 ERQKQKR-------NNLISLSCQSSFTTTGVFNPSVTMKTRTSSSLDIMREPMVEKEELV 205

Query: 133 IQSSGIVKRRSKS---ERRNCNNNNNNINEESAINNNLSFQSTETLSLFPTHPTG 180
            ++    KR  +S   E     N  N  +   A   N    +  TL LFP HP G
Sbjct: 206 EENE--YKRTCRSWGFENLEIENRRNKNSSTMATTFNKIIDNV-TLELFPLHPEG 250

[Close]

BLAST of Lsi02G013650 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 101.3 bits (251), Expect = 1.0e-21
Identity = 46/68 (67.65%), Postives = 54/68 (79.41%), Query Frame = 0


Query: 12 PPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITSRLKAYGHIEGKNVFYWFQNHKA 71
          P  S+RW PT EQ+ ILE +YR G+RTP+A QIQQIT+ L  YG IEGKNVFYWFQNHKA
Sbjct: 3  PVASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKA 62

Query: 72 RQRQKQKQ 80
          R RQK ++
Sbjct: 63 RDRQKLRK 70

[Close]

BLAST of Lsi02G013650 vs. TAIR 10
Match: AT2G01500.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 100.9 bits (250), Expect = 1.3e-21
Identity = 44/63 (69.84%), Postives = 53/63 (84.13%), Query Frame = 0


Query: 17  RWNPTKEQISILENLYRQGVRTPSADQIQQITSRLKAYGHIEGKNVFYWFQNHKARQRQK 76
           RWNPT EQI+ LE LYR G RTP+ +QIQQI S+L+ YG IEGKNVFYWFQNHKAR+R K
Sbjct: 61  RWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKARERLK 120

Query: 77  QKQ 80
           +++
Sbjct: 121 RRR 123

The following BLAST results are available for this feature:

BLAST of Lsi02G013650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6X7K1	1.6e-32	41.91	WUSCHEL-related homeobox 2 OS=Arabidopsis thaliana OX=3702 GN=WOX2 PE=2 SV=1	[more]
A2WWU7	1.3e-26	58.56	WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica OX=39946 GN=WOX5 PE=3 S...	[more]
Q8LR86	1.3e-26	58.56	WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX5 PE=2...	[more]
Q6X7K0	8.2e-24	72.86	WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2	[more]
Q6X7J9	1.1e-20	40.57	WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1	[more]

BLAST of Lsi02G013650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVA9	2.2e-88	79.65	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G505930 PE...	[more]
A0A6J1E0T1	4.4e-65	68.06	WUSCHEL-related homeobox 2 OS=Momordica charantia OX=3673 GN=LOC111025366 PE=3 S...	[more]
A0A6J1KD41	2.3e-61	65.14	WUSCHEL-related homeobox 2-like OS=Cucurbita maxima OX=3661 GN=LOC111493249 PE=3...	[more]
A0A5J5C598	1.1e-44	51.50	Homeobox domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_000934 P...	[more]
A0A438G1L6	1.5e-44	50.88	WUSCHEL-related homeobox 2 OS=Vitis vinifera OX=29760 GN=WOX2_1 PE=3 SV=1	[more]

BLAST of Lsi02G013650 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65708.1	4.5e-88	79.65	hypothetical protein Csa_019930 [Cucumis sativus]	[more]
XP_022158904.1	9.2e-65	68.06	WUSCHEL-related homeobox 2 [Momordica charantia]	[more]
XP_022998665.1	4.7e-61	65.14	WUSCHEL-related homeobox 2-like [Cucurbita maxima]	[more]
XP_031742465.1	1.8e-60	66.20	WUSCHEL-related homeobox 2 [Cucumis sativus]	[more]
KAG6607233.1	8.9e-60	65.00	Inner membrane protein ALBINO3, chloroplastic, partial [Cucurbita argyrosperma s...	[more]

BLAST of Lsi02G013650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59340.1	1.2e-33	41.91	WUSCHEL related homeobox 2	[more]
AT3G18010.1	5.8e-25	72.86	WUSCHEL related homeobox 1	[more]
AT1G46480.1	7.9e-22	40.57	WUSCHEL related homeobox 4	[more]
AT2G28610.1	1.0e-21	67.65	Homeodomain-like superfamily protein	[more]
AT2G01500.1	1.3e-21	69.84	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 135..155
None	No IPR available	GENE3D	1.10.10.60		coord: 15..82 e-value: 2.9E-10 score: 41.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 193..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR45940:SF6	TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED	coord: 4..219
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 13..80 e-value: 2.3E-6 score: 37.1
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 16..75 e-value: 3.1E-19 score: 68.5
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 11..76 score: 10.883665
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 17..77 e-value: 8.17977E-7 score: 43.0009
IPR044555	Protein WUSCHEL-like	PANTHER	PTHR45940	WUSCHEL-RELATED HOMEOBOX 1-RELATED	coord: 4..219
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 13..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G013650.1	Lsi02G013650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity