Lsi02G013500 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G013500
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	PGR5-like protein 1A
Location	chr02: 18079556 .. 18083793 (-)
RNA-Seq Expression	Lsi02G013500
Synteny	Lsi02G013500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCATTGTTGTTATAGATAGATCACTTAAGTTCGAGTCCATGAGAAATGATAATTGACCATGAAGACTCACTTTCGTGACCGACATTAGTATTTTAAACTTTGGTTAAGCATGGGCAAGACGACATGTCGACATACGTGACGACAACGAAACCATAGGCATTGGAGTGGAGTGAAAAAAAAAAAAAAAATCAAGAAGAAGACGGATTGTGGAGAAGGAGAACCAGAAACCCATTTTCCACCATAGAAATTCTCTCTCTATAACTCCAACCTTCAAAATTTTCAATCACCACCTCCCAATTTCTCCGCCTCATGTTCACCACCACCACCCTCCATGGCCGGCACATCCATCTCCTCCTTCTCCCGCCATCTCATCAAATCCACCGTCTCCGACCTCGCCAGAACAATCCGCACCGCCGCCCCCTTTCATCTTGTTCCTTTCTCCACCAAGACTCCCAATAACCCTCTTTCCTCTTCCGACGACCTCGCTCAAGGCCCCTCTTGCATATTCGTCGGCCCCATCGAGACTGCCACTCAAGAAACCCTTGAAGCTCTCTACCTTCAGGTTCTGGATTACTACCCCGCCTTTCGCTCTCTCTAATCTCTCTCTCTCTCTTCTCTCTCTTCTCCCTCTTTGACCTGTGTTCTTGTTCTGCTGCTTGTTTTAGGCTAGGGATGCGTATTACAGTGGCCAACCGTTGATCCTTGATGATATGTTCGACAGAGTCGAGGTAAGCTCGCGAAGGGAAAAGAAATTCTTCACGAATCCTGTTTGTTTTCTTACTTTGTTCTTTAAAATTTGTTTGATTCAGTTGAAACTGAGGTGGTATGGTTCCAAATCTGTGGTCAAATATCCTCGTTGCAGTCTTAGACGGCAATCAACGTATTCAGATGCTGAGGTGATTCTTCCTTCTCATTTCTTTTCTTTCTTTCTTCGGTTCAGCTGTTTAGGAATGTAACTTACGATTTTGTTTAAATTCACATTCAATCCTATAAATGAAGTCTTTGATTGTTTTGATTTGGTATAAATATTCAATGTTGTTTTTGCTTCATTTGAATATTCAATGACATGCATGTAGGGCAGGAAGATCTATCACAGGTTCTGGCATTAGCAGGCATATGGTTGGTGTTTCTGGCAATTGGCTGTTCAGCATGTCTTGTTCCTTTAATCTGCACGGCTGACTTAGTTTTCAAGGATCCACTCAGTTTAGGACTTTCCTATAACAGCCATGGATCTGCATTTGAATTTCTTTCAGCTATAAATGCCATCCTCTTCATGGCATTTGGGTCTCTGATTGGCTACCCAATTGCTACAGCTTCTGGTAAAATGGTTGCTAGTTGATTTTGCAATTCAATATATATACTGAAGAAAGGTCTTAATACAAGTCTAAGGGATACTAAATGTGGTACTCTTATGGCTCTCATATTCAGGATAATGCTTGCTTATTTCAAACTATTTACTGGCTTTTGGCTATTGCTGCAGTGGGAGTACTTCAGGGCTTATGGAGAAATGATTTGGTGGCACTGAAAGGAGCCTGCCCAAATTGTGGAGAAGAAGTATGTTAATCTATCAATAACTTTCGCCAGCACTATTATTTTGAATGGCTTGTGAACCGCTCCTTTATGTTTTTCTCCCCCACATTTCCATAGTTTATGGATGAATACTAGTTTCTTTCCAGTATGATTCTTATGTCAAAGGGAAGAAGAAGTTCAAAGTGTTTTAAAAAGCCCTTCCAGGTGCACACACCTTTTGTGAAGCCCCAAGGCTTTTGAGCCTTGAAATTTTTCATTATTTTAAAAATATAGTAATTATTGGAGTTTTTTCCATCTTTATTAACTTAAAAAAAAATCAAAGTTACTTAGCTTAAATGCAAAATTTGTTGTGTTCAGAGACTTTATTGTTCCTTGAGCTTTAAAAAACATTGCGTTCAACATATTTTAACATGTTTACATTAATCCATCTTTTAGGTGTTTGCATTTGTAAGATCAGATCGTGCCAATGGATCTCCTCATAGATCAGACTGTCATGTATGTGAATGCTTGTTGGAATTCCGGATCAAGTTTGAGGTAATTTACTTTGCTTTTGTTTCAATACCACTCTGAAACATTAAATGAAGAAAATCTAATCAACTAATACTTCCTTTTCCTGACGAATACAAGCTGAAAATGATCATCATGCAATTATTCATTGAGCATTTTCTGATTAGTATCCCCTATCTCCTTAAATTTCTAGTCATATACATGATTCATATGCCCTGCAAATCAGGCTCGGTGCATATGATATGAAACTACTATCATGATCTGTTCCCGTTTTCCTTTTACCTCCAACCTATGGCTTGGCTTGTCTTTCAAGTTCATAGAGGAGACTCTTTTGAAGAGAAAGATGCTTAATCTGGGGTTGGTATTGTGCAGAAATCAAGTTCAAGACTTGGTCGACAATGGGTTTACGGGCGTATTTACCTTGTAAGGAGTAAAAGCAGGCACCAAAGGTTGCTGTAGGATTTCAACTCCCAACTGTAAGAGCAATTTGTCTATATATAGTGACATGATTCTTTTCCAGTCTTCATCTTGCTTGCAATGTAACAGTGTAATAATATGGAATGAGGTCTTGTAGTTGTACCATTTCAGACATATAGTGCCAGTTAGGTGATTACAAATTAGTTTAGCTGCTGCCAGTAGTTGATAATCTTTCATCATCTTCATCCCATGGGGTTTACATATTCTATTTGTTATCTGTCTTTCTCCCCCAGCCAAGAACTGATAAATCAGCTTGATAGCAAACTAGTGAAAAACCATCATGGGTTTGCCTAGTGGTAAAAAAAGAGACAAAGTCATGGGTTCAATCCATGGTGGCCACCTACTTAGGAATTAATTTATTACGAGTCAGGCGGGTTGTCCCGTGAGATTAGTCGAGGTGCGTAAGTTGACCCGGACACTCACGGATATAAAAAAAAAAAAAAAAACAAAACTAGTGGAAAATTCTAGAAAATTTATAATATCCTCATCTAGTTTGATTGTTTATAGTGCCTTCTGATTACACTATGTGAAGTCTGACCCATTCCATTACGAAGAGGTTAACTTTAAGAATATTAGGTAATGACAAAATATATATATATATAATTTTGTCCAAGTGGCATATTCTTACTGGCAGGGAAACTGAGATTGATTACAACAATTTTTTCTGTCACTTGGCTAAAATTATCTATTTTGTTATTAGTTTCATAAACAACTCCATTTTAAAAGCTCTTTTTTTTTCTTTTCTTTTTTTGTTTAAAAGATAAAATAAAATAAAAGAGCTACACTTTCAATTGGCTATGTTTTGTCCCAATATTCTAATATTTTATTTTTTTGGTTTATCATTTCTTGACTCTTTTCTTTTCTTTTCTTTTTTCTATGAAAAAACTGGATGTGCTTGTAAATTATTTCATTCTTTTTGAAGAAAATGATGTTTTAATGTGTAACTTGAGAAACAAACATTTTAAAATAATACTTCTATTTATGTTTTGGAAAATGAAAATAAAAAACAAGAATCAAGAATTATTATCAAACCATCCTTTAAATTTTTCATGGCTCAATGTCAATTGAGTTTACATCCAAATCTATAACTAGGGTAATCTTTTTATTTCATTAAATTAGGCTAGACTGGTATATAAAAATAGTTAACTTAAATTAACGTATAGAATTAGTAAGAGGTGATTTAATTACTTCAATACAACTTATTTTTCATTGAAACACCCATCTAAAAATTCCGAAGGACATGACAAATGTTGTAAAATAATATAGGTCGACTTGATAATTTGAAGTTTGTTATGTTAATGTTGTAAAATTTAGGTTAAGTTTTAAAAATTAAAAAAACAAAAACAAAAATGAAATGCTCTTGAAGAAAAGTGAAACTATAGATGTTTGCCCGAGGTTTGTAGAGGAACGTGTTTCATGGAGTTGAATTTGTGTTTATGTGAATTTGATGCAGATATGGTTCGATCTCTGTTGAATGCGTTTGATGTATGGAAGCGAAGCGGATGTATGGATTCTAAGGAATTTCAATCTTCAAGTGTGATTCAGTTGGGAGTCTAAGAATTCTCTTGGGCTCAATTGAGTCTATTTTTGGACTCAACTAATTAGATAGTCTTTGGGCTAAATTAAGGCTATTTTTTTTTAGACAATTGGACGTGTCACCATCGAGATTTGCTAATTTATGTTGAGACACATGTCAACTTTTAATTAGTACCGAATTCAATT

mRNA sequence

CTTCATTGTTGTTATAGATAGATCACTTAAGTTCGAGTCCATGAGAAATGATAATTGACCATGAAGACTCACTTTCGTGACCGACATTAGTATTTTAAACTTTGGTTAAGCATGGGCAAGACGACATGTCGACATACGTGACGACAACGAAACCATAGGCATTGGAGTGGAGTGAAAAAAAAAAAAAAAATCAAGAAGAAGACGGATTGTGGAGAAGGAGAACCAGAAACCCATTTTCCACCATAGAAATTCTCTCTCTATAACTCCAACCTTCAAAATTTTCAATCACCACCTCCCAATTTCTCCGCCTCATGTTCACCACCACCACCCTCCATGGCCGGCACATCCATCTCCTCCTTCTCCCGCCATCTCATCAAATCCACCGTCTCCGACCTCGCCAGAACAATCCGCACCGCCGCCCCCTTTCATCTTGTTCCTTTCTCCACCAAGACTCCCAATAACCCTCTTTCCTCTTCCGACGACCTCGCTCAAGGCCCCTCTTGCATATTCGTCGGCCCCATCGAGACTGCCACTCAAGAAACCCTTGAAGCTCTCTACCTTCAGGCTAGGGATGCGTATTACAGTGGCCAACCGTTGATCCTTGATGATATGTTCGACAGAGTCGAGTTGAAACTGAGGTGGTATGGTTCCAAATCTGTGGTCAAATATCCTCGTTGCAGTCTTAGACGGCAATCAACGTATTCAGATGCTGAGGAAGATCTATCACAGGTTCTGGCATTAGCAGGCATATGGTTGGTGTTTCTGGCAATTGGCTGTTCAGCATGTCTTGTTCCTTTAATCTGCACGGCTGACTTAGTTTTCAAGGATCCACTCAGTTTAGGACTTTCCTATAACAGCCATGGATCTGCATTTGAATTTCTTTCAGCTATAAATGCCATCCTCTTCATGGCATTTGGGTCTCTGATTGGCTACCCAATTGCTACAGCTTCTGGTAAAATGGATAATGCTTGCTTATTTCAAACTATTTACTGGCTTTTGGCTATTGCTGCAGTGGGAGTACTTCAGGGCTTATGGAGAAATGATTTGGTGGCACTGAAAGGAGCCTGCCCAAATTGTGGAGAAGAAGTGTTTGCATTTGTAAGATCAGATCGTGCCAATGGATCTCCTCATAGATCAGACTGTCATGTATGTGAATGCTTGTTGGAATTCCGGATCAAGTTTGAGAAATCAAGTTCAAGACTTGGTCGACAATGGGTTTACGGGCGTATTTACCTTGTAAGGAGTAAAAGCAGGCACCAAAGGTTGCTGTAGGATTTCAACTCCCAACTATATGGTTCGATCTCTGTTGAATGCGTTTGATGTATGGAAGCGAAGCGGATGTATGGATTCTAAGGAATTTCAATCTTCAAGTGTGATTCAGTTGGGAGTCTAAGAATTCTCTTGGGCTCAATTGAGTCTATTTTTGGACTCAACTAATTAGATAGTCTTTGGGCTAAATTAAGGCTATTTTTTTTTAGACAATTGGACGTGTCACCATCGAGATTTGCTAATTTATGTTGAGACACATGTCAACTTTTAATTAGTACCGAATTCAATT

Coding sequence (CDS)

ATGGCCGGCACATCCATCTCCTCCTTCTCCCGCCATCTCATCAAATCCACCGTCTCCGACCTCGCCAGAACAATCCGCACCGCCGCCCCCTTTCATCTTGTTCCTTTCTCCACCAAGACTCCCAATAACCCTCTTTCCTCTTCCGACGACCTCGCTCAAGGCCCCTCTTGCATATTCGTCGGCCCCATCGAGACTGCCACTCAAGAAACCCTTGAAGCTCTCTACCTTCAGGCTAGGGATGCGTATTACAGTGGCCAACCGTTGATCCTTGATGATATGTTCGACAGAGTCGAGTTGAAACTGAGGTGGTATGGTTCCAAATCTGTGGTCAAATATCCTCGTTGCAGTCTTAGACGGCAATCAACGTATTCAGATGCTGAGGAAGATCTATCACAGGTTCTGGCATTAGCAGGCATATGGTTGGTGTTTCTGGCAATTGGCTGTTCAGCATGTCTTGTTCCTTTAATCTGCACGGCTGACTTAGTTTTCAAGGATCCACTCAGTTTAGGACTTTCCTATAACAGCCATGGATCTGCATTTGAATTTCTTTCAGCTATAAATGCCATCCTCTTCATGGCATTTGGGTCTCTGATTGGCTACCCAATTGCTACAGCTTCTGGTAAAATGGATAATGCTTGCTTATTTCAAACTATTTACTGGCTTTTGGCTATTGCTGCAGTGGGAGTACTTCAGGGCTTATGGAGAAATGATTTGGTGGCACTGAAAGGAGCCTGCCCAAATTGTGGAGAAGAAGTGTTTGCATTTGTAAGATCAGATCGTGCCAATGGATCTCCTCATAGATCAGACTGTCATGTATGTGAATGCTTGTTGGAATTCCGGATCAAGTTTGAGAAATCAAGTTCAAGACTTGGTCGACAATGGGTTTACGGGCGTATTTACCTTGTAAGGAGTAAAAGCAGGCACCAAAGGTTGCTGTAG

Protein sequence

MAGTSISSFSRHLIKSTVSDLARTIRTAAPFHLVPFSTKTPNNPLSSSDDLAQGPSCIFVGPIETATQETLEALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQSTYSDAEEDLSQVLALAGIWLVFLAIGCSACLVPLICTADLVFKDPLSLGLSYNSHGSAFEFLSAINAILFMAFGSLIGYPIATASGKMDNACLFQTIYWLLAIAAVGVLQGLWRNDLVALKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEKSSSRLGRQWVYGRIYLVRSKSRHQRLL

Homology

[Close]

BLAST of Lsi02G013500 vs. ExPASy Swiss-Prot
Match: Q8GYC7 (PGR5-like protein 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGRL1B PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.8e-08
Identity = 51/187 (27.27%), Postives = 80/187 (42.78%), Query Frame = 0


Query: 72  EALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQSTYSDAEEDLS 131
           E  +L+A  AY SG P++ D+ +D++++KL+  GS+ V + PRCSLR +  YSD   D  
Sbjct: 129 EQRFLEASMAYVSGNPILSDEEYDKLKMKLKMDGSEIVCEGPRCSLRSKKVYSDLAIDYF 188

Query: 132 QVLALAGIWLVFLAIGCSACLVPLI---CTADLVFKDPLSLGLSYNSHGSAFEFLSAINA 191
           ++  L  +    +A+G    L  +     T  L   +P S           F + +A+ A
Sbjct: 189 KMF-LLNVPATVVALGLFFFLDDITGFEITYLLELPEPFSF---------IFTWFAAVPA 248

Query: 192 ILFMAFGSLIGYPIATASGKMDNACLFQTIYWLLAIAAVGVLQGLWRNDLVALKGACPNC 251
           I+++A                                    L  L   D + LKG CPNC
Sbjct: 249 IVYLALS----------------------------------LTKLILKDFLILKGPCPNC 271

Query: 252 GEEVFAF 256
           G E  +F
Sbjct: 309 GTENVSF 271

[Close]

BLAST of Lsi02G013500 vs. ExPASy Swiss-Prot
Match: Q8H112 (PGR5-like protein 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGRL1A PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.0e-08
Identity = 54/208 (25.96%), Postives = 85/208 (40.87%), Query Frame = 0


Query: 72  EALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQSTYSDAEEDLS 131
           E  +L+A  AY SG P++ D+ +D+++LKL+  GS  V + PRCSLR +  YSD   D  
Sbjct: 140 EQRFLEASMAYVSGNPILNDEEYDKLKLKLKIDGSDIVSEGPRCSLRSKKVYSDLAVDYF 199

Query: 132 QVLALAGIWLVFLAIGCSACLVPLI---CTADLVFKDPLSLGLSYNSHGSAFEFLSAINA 191
           ++L L  +    +A+G    L  +     T  +   +P S           F + +A+  
Sbjct: 200 KML-LLNVPATVVALGLFFFLDDITGFEITYIMELPEPYSF---------IFTWFAAVPV 259

Query: 192 ILFMAFGSLIGYPIATASGKMDNACLFQTIYWLLAIAAVGVLQGLWRNDLVALKGACPNC 251
           I+++A                                    +  L   D + LKG CPNC
Sbjct: 260 IVYLALS----------------------------------ITKLIIKDFLILKGPCPNC 303

Query: 252 GEE---VFAFVRSDRANGSPHRSDCHVC 274
           G E    F  + S  + G  +   C  C
Sbjct: 320 GTENTSFFGTILSISSGGKTNTVKCTNC 303

[Close]

BLAST of Lsi02G013500 vs. ExPASy TrEMBL
Match: A0A5D3BED5 (PGR5-like protein 1A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002130 PE=4 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 1.6e-148
Identity = 272/312 (87.18%), Postives = 283/312 (90.71%), Query Frame = 0


Query: 1   MAGTSISSFSRHLIKSTVSDLARTIRTAAPFHLVPFSTKTPNNPLSSSDDLAQGPSCIFV 60
           MAGTS +SFS HLIKSTVS+L RTIR   PFHLV FSTKTPN+PLSSSD+LAQGPSCIFV
Sbjct: 1   MAGTS-TSFSPHLIKSTVSNLTRTIRAVTPFHLVLFSTKTPNSPLSSSDNLAQGPSCIFV 60

Query: 61  GPIETATQETLEALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQ 120
           GPIETATQETLEALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQ
Sbjct: 61  GPIETATQETLEALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQ 120

Query: 121 STYSDAEEDLSQVLALAGIWLVFLAIGCSACLVPLICTADLVFKDPLSLGLSYNSHGSAF 180
           STYSDAEEDLSQVLALAGIWL+FLA+GCSACLVPLICTADL+F+DPLSLGLSYN+HGS F
Sbjct: 121 STYSDAEEDLSQVLALAGIWLLFLALGCSACLVPLICTADLIFQDPLSLGLSYNTHGSPF 180

Query: 181 EFLSAINAILFMAFGSLIGYPIATASGKMDNACLFQTIYWLLAIAAVGVLQGLWRNDLVA 240
           EFLSAINAILFMAFGSLIGYPIATAS                    VGVLQGLWRNDLVA
Sbjct: 181 EFLSAINAILFMAFGSLIGYPIATAS--------------------VGVLQGLWRNDLVA 240

Query: 241 LKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEKSSSRLGRQWVYGRIY 300
           LKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEKSS++LGRQWVYGRIY
Sbjct: 241 LKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEKSSTKLGRQWVYGRIY 291

Query: 301 LVRSKSRHQRLL 313
           LVR KSRHQRLL
Sbjct: 301 LVRRKSRHQRLL 291

[Close]

BLAST of Lsi02G013500 vs. ExPASy TrEMBL
Match: A0A1S3C6W2 (PGR5-like protein 1A, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497151 PE=4 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 1.6e-148
Identity = 272/312 (87.18%), Postives = 283/312 (90.71%), Query Frame = 0


Query: 1   MAGTSISSFSRHLIKSTVSDLARTIRTAAPFHLVPFSTKTPNNPLSSSDDLAQGPSCIFV 60
           MAGTS +SFS HLIKSTVS+L RTIR   PFHLV FSTKTPN+PLSSSD+LAQGPSCIFV
Sbjct: 1   MAGTS-TSFSPHLIKSTVSNLTRTIRAVTPFHLVLFSTKTPNSPLSSSDNLAQGPSCIFV 60

Query: 61  GPIETATQETLEALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQ 120
           GPIETATQETLEALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQ
Sbjct: 61  GPIETATQETLEALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQ 120

Query: 121 STYSDAEEDLSQVLALAGIWLVFLAIGCSACLVPLICTADLVFKDPLSLGLSYNSHGSAF 180
           STYSDAEEDLSQVLALAGIWL+FLA+GCSACLVPLICTADL+F+DPLSLGLSYN+HGS F
Sbjct: 121 STYSDAEEDLSQVLALAGIWLLFLALGCSACLVPLICTADLIFQDPLSLGLSYNTHGSPF 180

Query: 181 EFLSAINAILFMAFGSLIGYPIATASGKMDNACLFQTIYWLLAIAAVGVLQGLWRNDLVA 240
           EFLSAINAILFMAFGSLIGYPIATAS                    VGVLQGLWRNDLVA
Sbjct: 181 EFLSAINAILFMAFGSLIGYPIATAS--------------------VGVLQGLWRNDLVA 240

Query: 241 LKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEKSSSRLGRQWVYGRIY 300
           LKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEKSS++LGRQWVYGRIY
Sbjct: 241 LKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEKSSTKLGRQWVYGRIY 291

Query: 301 LVRSKSRHQRLL 313
           LVR KSRHQRLL
Sbjct: 301 LVRRKSRHQRLL 291

[Close]

BLAST of Lsi02G013500 vs. ExPASy TrEMBL
Match: A0A0A0M0I2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G523060 PE=4 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 4.6e-148
Identity = 271/312 (86.86%), Postives = 282/312 (90.38%), Query Frame = 0


Query: 1   MAGTSISSFSRHLIKSTVSDLARTIRTAAPFHLVPFSTKTPNNPLSSSDDLAQGPSCIFV 60
           MAG S +SFS HLIKSTVS+LARTIR A PFHLVPFSTKTPN+PLSSS+DLAQGPSCIFV
Sbjct: 1   MAGAS-TSFSPHLIKSTVSNLARTIRAATPFHLVPFSTKTPNSPLSSSEDLAQGPSCIFV 60

Query: 61  GPIETATQETLEALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQ 120
           GPIETATQETLEALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQ
Sbjct: 61  GPIETATQETLEALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQ 120

Query: 121 STYSDAEEDLSQVLALAGIWLVFLAIGCSACLVPLICTADLVFKDPLSLGLSYNSHGSAF 180
           STYSDAEEDLSQVLALAGIWL+FLA+GCSACLVPLIC ADL+FKDPLSLGLSY++HGS F
Sbjct: 121 STYSDAEEDLSQVLALAGIWLLFLALGCSACLVPLICIADLIFKDPLSLGLSYDTHGSPF 180

Query: 181 EFLSAINAILFMAFGSLIGYPIATASGKMDNACLFQTIYWLLAIAAVGVLQGLWRNDLVA 240
            FLSAINAILFMAFGSLIGYPI TAS                    VGVLQGLWRNDLVA
Sbjct: 181 GFLSAINAILFMAFGSLIGYPITTAS--------------------VGVLQGLWRNDLVA 240

Query: 241 LKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEKSSSRLGRQWVYGRIY 300
           LKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEKSS++LGRQWVYGRIY
Sbjct: 241 LKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEKSSTKLGRQWVYGRIY 291

Query: 301 LVRSKSRHQRLL 313
           LVR KSRHQRLL
Sbjct: 301 LVRRKSRHQRLL 291

[Close]

BLAST of Lsi02G013500 vs. ExPASy TrEMBL
Match: A0A6J1HLH9 (uncharacterized protein LOC111464688 OS=Cucurbita moschata OX=3662 GN=LOC111464688 PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.3e-139
Identity = 263/312 (84.29%), Postives = 277/312 (88.78%), Query Frame = 0


Query: 1   MAGTSISSFSRHLIKSTVSDLARTIRTAAPFHLVPFSTKTPNNPLSSSDDLAQGPSCIFV 60
           MAGT  +SFSRHLI+STVSDLARTIRTAAPFHL  FS KT    LSSS+DLAQGPSCIFV
Sbjct: 1   MAGT-CTSFSRHLIQSTVSDLARTIRTAAPFHLPRFSAKT---ALSSSNDLAQGPSCIFV 60

Query: 61  GPIETATQETLEALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQ 120
           GPI+TA+QETLEALYLQARDAYY+GQPLILDDMFDRVELKLR YGSKSVVKYPRCSLRRQ
Sbjct: 61  GPIDTASQETLEALYLQARDAYYNGQPLILDDMFDRVELKLRRYGSKSVVKYPRCSLRRQ 120

Query: 121 STYSDAEEDLSQVLALAGIWLVFLAIGCSACLVPLICTADLVFKDPLSLGLSYNSHGSAF 180
           STY+DAEEDLSQVLALAGIWLVFLA+GCSACLVPLICTADLVFKDPLSLGLSYN+ GSAF
Sbjct: 121 STYADAEEDLSQVLALAGIWLVFLALGCSACLVPLICTADLVFKDPLSLGLSYNTQGSAF 180

Query: 181 EFLSAINAILFMAFGSLIGYPIATASGKMDNACLFQTIYWLLAIAAVGVLQGLWRNDLVA 240
           EFLSAINAILF+ FGSLIGYPIA+AS                    VGVLQGLWRNDLVA
Sbjct: 181 EFLSAINAILFIGFGSLIGYPIASAS--------------------VGVLQGLWRNDLVA 240

Query: 241 LKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEKSSSRLGRQWVYGRIY 300
           L+GACPNCGEEVFAFVRSDRAN SPHRSDCHVCECLLEFR+KFEKSSSRLGR+WVYGRIY
Sbjct: 241 LRGACPNCGEEVFAFVRSDRANVSPHRSDCHVCECLLEFRVKFEKSSSRLGRRWVYGRIY 288

Query: 301 LVRSKSRHQRLL 313
           LVR KSR QRLL
Sbjct: 301 LVRGKSRQQRLL 288

[Close]

BLAST of Lsi02G013500 vs. ExPASy TrEMBL
Match: A0A6J1GAD8 (PGR5-like protein 1A, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452235 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.5e-138
Identity = 257/310 (82.90%), Postives = 270/310 (87.10%), Query Frame = 0


Query: 1   MAGTSISSFSRHLIKSTVSDLARTIRTAAPFHLVPFSTKTPNNPLSSSDDLAQGPSCIFV 60
           MA T  +SF RHL K TVS+L RTIR+A PFHLV FS +T N+ LSSSD+L QGPSCIFV
Sbjct: 1   MAATR-TSFFRHLTKPTVSELTRTIRSAHPFHLVRFSARTANDALSSSDELVQGPSCIFV 60

Query: 61  GPIETATQETLEALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQ 120
           GPIETA++ETLEALYLQARDAYYSGQPLI+DDMFDRVELKLRW+GSKSVVKYPRCSLRRQ
Sbjct: 61  GPIETASKETLEALYLQARDAYYSGQPLIVDDMFDRVELKLRWFGSKSVVKYPRCSLRRQ 120

Query: 121 STYSDAEEDLSQVLALAGIWLVFLAIGCSACLVPLICTADLVFKDPLSLGLSYNSHGSAF 180
           STY+DAEEDLSQVLALAGIW VFLA+GCSACLVPLICTADLVFKDPLSLGLSYNS GSAF
Sbjct: 121 STYADAEEDLSQVLALAGIWSVFLALGCSACLVPLICTADLVFKDPLSLGLSYNSQGSAF 180

Query: 181 EFLSAINAILFMAFGSLIGYPIATASGKMDNACLFQTIYWLLAIAAVGVLQGLWRNDLVA 240
           EFLSAINAILF+AFGSLIGYPIATAS                    VGVLQGLWRNDLVA
Sbjct: 181 EFLSAINAILFIAFGSLIGYPIATAS--------------------VGVLQGLWRNDLVA 240

Query: 241 LKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEKSSSRLGRQWVYGRIY 300
           LKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEKSSSR GRQWVYGRIY
Sbjct: 241 LKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEKSSSRQGRQWVYGRIY 289

Query: 301 LVRSKSRHQR 311
            VR K R QR
Sbjct: 301 FVRGKRRRQR 289

[Close]

BLAST of Lsi02G013500 vs. NCBI nr
Match: XP_038894302.1 (PGR5-like protein 1A, chloroplastic [Benincasa hispida])

HSP 1 Score: 556.2 bits (1432), Expect = 1.8e-154
Identity = 284/312 (91.03%), Postives = 288/312 (92.31%), Query Frame = 0


Query: 1   MAGTSISSFSRHLIKSTVSDLARTIRTAAPFHLVPFSTKTPNNPLSSSDDLAQGPSCIFV 60
           MAGTS +SFSRHLIKSTVSDLARTIRTAAPFH VPF+TKTPNNPLSSSDDLAQGPSCIFV
Sbjct: 1   MAGTS-TSFSRHLIKSTVSDLARTIRTAAPFHRVPFATKTPNNPLSSSDDLAQGPSCIFV 60

Query: 61  GPIETATQETLEALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQ 120
           GPIETATQETLE+LYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQ
Sbjct: 61  GPIETATQETLESLYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQ 120

Query: 121 STYSDAEEDLSQVLALAGIWLVFLAIGCSACLVPLICTADLVFKDPLSLGLSYNSHGSAF 180
           STYSDAEEDLSQVLALAGIWLVFLA+GCSACLVPLICTADLVFKDPLSLGLSYNSHGSAF
Sbjct: 121 STYSDAEEDLSQVLALAGIWLVFLALGCSACLVPLICTADLVFKDPLSLGLSYNSHGSAF 180

Query: 181 EFLSAINAILFMAFGSLIGYPIATASGKMDNACLFQTIYWLLAIAAVGVLQGLWRNDLVA 240
           EFLSAINAILFMAFGSLIGYPIATAS                    VGVLQGLWRNDLVA
Sbjct: 181 EFLSAINAILFMAFGSLIGYPIATAS--------------------VGVLQGLWRNDLVA 240

Query: 241 LKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEKSSSRLGRQWVYGRIY 300
           LKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEK SSRLGRQWVYGRIY
Sbjct: 241 LKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEKLSSRLGRQWVYGRIY 291

Query: 301 LVRSKSRHQRLL 313
           LVR KSRHQRLL
Sbjct: 301 LVRGKSRHQRLL 291

[Close]

BLAST of Lsi02G013500 vs. NCBI nr
Match: XP_008457470.1 (PREDICTED: PGR5-like protein 1A, chloroplastic [Cucumis melo] >KAA0067750.1 PGR5-like protein 1A [Cucumis melo var. makuwa] >TYJ97394.1 PGR5-like protein 1A [Cucumis melo var. makuwa])

HSP 1 Score: 535.4 bits (1378), Expect = 3.2e-148
Identity = 272/312 (87.18%), Postives = 283/312 (90.71%), Query Frame = 0


Query: 1   MAGTSISSFSRHLIKSTVSDLARTIRTAAPFHLVPFSTKTPNNPLSSSDDLAQGPSCIFV 60
           MAGTS +SFS HLIKSTVS+L RTIR   PFHLV FSTKTPN+PLSSSD+LAQGPSCIFV
Sbjct: 1   MAGTS-TSFSPHLIKSTVSNLTRTIRAVTPFHLVLFSTKTPNSPLSSSDNLAQGPSCIFV 60

Query: 61  GPIETATQETLEALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQ 120
           GPIETATQETLEALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQ
Sbjct: 61  GPIETATQETLEALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQ 120

Query: 121 STYSDAEEDLSQVLALAGIWLVFLAIGCSACLVPLICTADLVFKDPLSLGLSYNSHGSAF 180
           STYSDAEEDLSQVLALAGIWL+FLA+GCSACLVPLICTADL+F+DPLSLGLSYN+HGS F
Sbjct: 121 STYSDAEEDLSQVLALAGIWLLFLALGCSACLVPLICTADLIFQDPLSLGLSYNTHGSPF 180

Query: 181 EFLSAINAILFMAFGSLIGYPIATASGKMDNACLFQTIYWLLAIAAVGVLQGLWRNDLVA 240
           EFLSAINAILFMAFGSLIGYPIATAS                    VGVLQGLWRNDLVA
Sbjct: 181 EFLSAINAILFMAFGSLIGYPIATAS--------------------VGVLQGLWRNDLVA 240

Query: 241 LKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEKSSSRLGRQWVYGRIY 300
           LKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEKSS++LGRQWVYGRIY
Sbjct: 241 LKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEKSSTKLGRQWVYGRIY 291

Query: 301 LVRSKSRHQRLL 313
           LVR KSRHQRLL
Sbjct: 301 LVRRKSRHQRLL 291

[Close]

BLAST of Lsi02G013500 vs. NCBI nr
Match: XP_004145292.1 (PGR5-like protein 1A, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 533.9 bits (1374), Expect = 9.4e-148
Identity = 271/312 (86.86%), Postives = 282/312 (90.38%), Query Frame = 0


Query: 1   MAGTSISSFSRHLIKSTVSDLARTIRTAAPFHLVPFSTKTPNNPLSSSDDLAQGPSCIFV 60
           MAG S +SFS HLIKSTVS+LARTIR A PFHLVPFSTKTPN+PLSSS+DLAQGPSCIFV
Sbjct: 1   MAGAS-TSFSPHLIKSTVSNLARTIRAATPFHLVPFSTKTPNSPLSSSEDLAQGPSCIFV 60

Query: 61  GPIETATQETLEALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQ 120
           GPIETATQETLEALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQ
Sbjct: 61  GPIETATQETLEALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQ 120

Query: 121 STYSDAEEDLSQVLALAGIWLVFLAIGCSACLVPLICTADLVFKDPLSLGLSYNSHGSAF 180
           STYSDAEEDLSQVLALAGIWL+FLA+GCSACLVPLIC ADL+FKDPLSLGLSY++HGS F
Sbjct: 121 STYSDAEEDLSQVLALAGIWLLFLALGCSACLVPLICIADLIFKDPLSLGLSYDTHGSPF 180

Query: 181 EFLSAINAILFMAFGSLIGYPIATASGKMDNACLFQTIYWLLAIAAVGVLQGLWRNDLVA 240
            FLSAINAILFMAFGSLIGYPI TAS                    VGVLQGLWRNDLVA
Sbjct: 181 GFLSAINAILFMAFGSLIGYPITTAS--------------------VGVLQGLWRNDLVA 240

Query: 241 LKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEKSSSRLGRQWVYGRIY 300
           LKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEKSS++LGRQWVYGRIY
Sbjct: 241 LKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEKSSTKLGRQWVYGRIY 291

Query: 301 LVRSKSRHQRLL 313
           LVR KSRHQRLL
Sbjct: 301 LVRRKSRHQRLL 291

[Close]

BLAST of Lsi02G013500 vs. NCBI nr
Match: KGN66159.2 (hypothetical protein Csa_019598 [Cucumis sativus])

HSP 1 Score: 520.8 bits (1340), Expect = 8.3e-144
Identity = 271/335 (80.90%), Postives = 282/335 (84.18%), Query Frame = 0


Query: 1   MAGTSISSFSRHLIKSTVSDLARTIRTAAPFHLVPFSTKTPNNPLSSSDDLAQGPSCIFV 60
           MAG S +SFS HLIKSTVS+LARTIR A PFHLVPFSTKTPN+PLSSS+DLAQGPSCIFV
Sbjct: 1   MAGAS-TSFSPHLIKSTVSNLARTIRAATPFHLVPFSTKTPNSPLSSSEDLAQGPSCIFV 60

Query: 61  GPIETATQETLEALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQ 120
           GPIETATQETLEALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQ
Sbjct: 61  GPIETATQETLEALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQ 120

Query: 121 STYSDAE-----------------------EDLSQVLALAGIWLVFLAIGCSACLVPLIC 180
           STYSDAE                       EDLSQVLALAGIWL+FLA+GCSACLVPLIC
Sbjct: 121 STYSDAEVILLLISLFFLLLGFVQLGSCGQEDLSQVLALAGIWLLFLALGCSACLVPLIC 180

Query: 181 TADLVFKDPLSLGLSYNSHGSAFEFLSAINAILFMAFGSLIGYPIATASGKMDNACLFQT 240
            ADL+FKDPLSLGLSY++HGS F FLSAINAILFMAFGSLIGYPI TAS           
Sbjct: 181 IADLIFKDPLSLGLSYDTHGSPFGFLSAINAILFMAFGSLIGYPITTAS----------- 240

Query: 241 IYWLLAIAAVGVLQGLWRNDLVALKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLL 300
                    VGVLQGLWRNDLVALKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLL
Sbjct: 241 ---------VGVLQGLWRNDLVALKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLL 300

Query: 301 EFRIKFEKSSSRLGRQWVYGRIYLVRSKSRHQRLL 313
           EFRIKFEKSS++LGRQWVYGRIYLVR KSRHQRLL
Sbjct: 301 EFRIKFEKSSTKLGRQWVYGRIYLVRRKSRHQRLL 314

[Close]

BLAST of Lsi02G013500 vs. NCBI nr
Match: KAG7036934.1 (PGR5-like protein 1B, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 515.8 bits (1327), Expect = 2.7e-142
Identity = 264/310 (85.16%), Postives = 278/310 (89.68%), Query Frame = 0


Query: 1   MAGTSISSFSRHLIKSTVSDLARTIRTAAPFHLVPFSTKTPNNPLSSSDDLAQGPSCIFV 60
           MA T  +SF RHL K TVS+L RTIR+A PFHLV FS +T NN LSSSD+L QGPSCIFV
Sbjct: 1   MAATR-TSFFRHLAKPTVSELTRTIRSAHPFHLVRFSARTANNALSSSDELVQGPSCIFV 60

Query: 61  GPIETATQETLEALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQ 120
           GPIETA++ETLEALYLQARDAYYSGQPLI+DDMFDRVELKLRW+GSKSVVKYPRCSLRRQ
Sbjct: 61  GPIETASKETLEALYLQARDAYYSGQPLIVDDMFDRVELKLRWFGSKSVVKYPRCSLRRQ 120

Query: 121 STYSDAEEDLSQVLALAGIWLVFLAIGCSACLVPLICTADLVFKDPLSLGLSYNSHGSAF 180
           STY+DAEEDLSQVLALAGIW VFLA+GCSACLVPLICTADLVFKDPLSLGLSYNS GSAF
Sbjct: 121 STYADAEEDLSQVLALAGIWSVFLALGCSACLVPLICTADLVFKDPLSLGLSYNSQGSAF 180

Query: 181 EFLSAINAILFMAFGSLIGYPIATASGKMDNACLFQTIYWLLAIAAVGVLQGLWRNDLVA 240
           EFLSAINAILFMAFGSLIGYPIATAS  +        + + LAIAAVGVLQGLWRNDLVA
Sbjct: 181 EFLSAINAILFMAFGSLIGYPIATASDYL--------LAFGLAIAAVGVLQGLWRNDLVA 240

Query: 241 LKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEKSSSRLGRQWVYGRIY 300
           LKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEKSSSR GRQWVYGRIY
Sbjct: 241 LKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEKSSSRQGRQWVYGRIY 300

Query: 301 LVRSKSRHQR 311
            VR K R QR
Sbjct: 301 FVRGKRRRQR 301

[Close]

BLAST of Lsi02G013500 vs. TAIR 10
Match: AT5G59400.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PGR5-like B (TAIR:AT4G11960.1); Has 97 Blast hits to 97 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 328.6 bits (841), Expect = 5.6e-90
Identity = 178/315 (56.51%), Postives = 214/315 (67.94%), Query Frame = 0


Query: 1   MAGTSISSFSRHLIKSTVSDLARTIRTAAPFHLVPFSTKT---PNNPLSSSDDLAQGPSC 60
           MAGT  S   R +  S++ +L+R I  A     V FST+T       L++     +GPSC
Sbjct: 1   MAGTCTSIRPRLIGSSSIVELSRLINRAGVPFSVRFSTRTRALHGGGLTAPTSREEGPSC 60

Query: 61  IFVGPIETATQETLEALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSL 120
           IFVGPI++A +ETLEALY QA+DAYY+G+PLI+DDMFDRVELKLRWYGSKSVVKYPRCSL
Sbjct: 61  IFVGPIDSARKETLEALYRQAKDAYYNGKPLIVDDMFDRVELKLRWYGSKSVVKYPRCSL 120

Query: 121 RRQSTYSDAEEDLSQVLALAGIWLVFLAIGCSACLVPLICTADLVF-KDPLSLGLSYNSH 180
            RQSTY+DAE+D SQVL LA +W++    G SAC++P I    LV+  DP   GL Y+S 
Sbjct: 121 LRQSTYADAEDDASQVLLLATVWIMIFLFGSSACVLPTIYGVGLVYGGDPFDSGLVYSSQ 180

Query: 181 -GSAFEFLSAINAILFMAFGSLIGYPIATASGKMDNACLFQTIYWLLAIAAVGVLQGLWR 240
             S+   LS  N IL    G   GYPIA+                    +AV VL+GLWR
Sbjct: 181 LSSSVPILSKFNGILLSVLGPAFGYPIAS--------------------SAVRVLKGLWR 240

Query: 241 NDLVALKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFEKSSSRLGRQWV 300
           NDL ALKG CPNCGEEVFAFVRSD++N S H++DCHVCEC LEFR K EKS+SRLGR+WV
Sbjct: 241 NDLTALKGDCPNCGEEVFAFVRSDQSNRSAHKADCHVCECTLEFRTKVEKSASRLGRKWV 295

Query: 301 YGRIYLVRSKSRHQR 311
           YGRIYLV    R +R
Sbjct: 301 YGRIYLVSRPRRDRR 295

[Close]

BLAST of Lsi02G013500 vs. TAIR 10
Match: AT5G59400.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PGR5-like B (TAIR:AT4G11960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 323.6 bits (828), Expect = 1.8e-88
Identity = 178/317 (56.15%), Postives = 214/317 (67.51%), Query Frame = 0


Query: 1   MAGTSISSFSRHLIKSTVSDLARTIRTAAPFHLVPFSTKT---PNNPLSSSDDLAQGPSC 60
           MAGT  S   R +  S++ +L+R I  A     V FST+T       L++     +GPSC
Sbjct: 1   MAGTCTSIRPRLIGSSSIVELSRLINRAGVPFSVRFSTRTRALHGGGLTAPTSREEGPSC 60

Query: 61  IFVGPIETATQETLEALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSL 120
           IFVGPI++A +ETLEALY QA+DAYY+G+PLI+DDMFDRVELKLRWYGSKSVVKYPRCSL
Sbjct: 61  IFVGPIDSARKETLEALYRQAKDAYYNGKPLIVDDMFDRVELKLRWYGSKSVVKYPRCSL 120

Query: 121 RRQSTYSDAEEDLSQVLALAGIWLVFLAIGCSACLVPLICTADLVF-KDPLSLGLSYNSH 180
            RQSTY+DAE+D SQVL LA +W++    G SAC++P I    LV+  DP   GL Y+S 
Sbjct: 121 LRQSTYADAEDDASQVLLLATVWIMIFLFGSSACVLPTIYGVGLVYGGDPFDSGLVYSSQ 180

Query: 181 -GSAFEFLSAINAILFMAFGSLIGYPIATASGKMDNACLFQTIYWLLAIAAVGVLQGLWR 240
             S+   LS  N IL    G   GYPIA+                    +AV VL+GLWR
Sbjct: 181 LSSSVPILSKFNGILLSVLGPAFGYPIAS--------------------SAVRVLKGLWR 240

Query: 241 NDLVALKGACPNCGEEVFAFVRSDRANGSPHRSDCHVCECLLEFRIKFE--KSSSRLGRQ 300
           NDL ALKG CPNCGEEVFAFVRSD++N S H++DCHVCEC LEFR K E  KS+SRLGR+
Sbjct: 241 NDLTALKGDCPNCGEEVFAFVRSDQSNRSAHKADCHVCECTLEFRTKVEVDKSASRLGRK 297

Query: 301 WVYGRIYLVRSKSRHQR 311
           WVYGRIYLV    R +R
Sbjct: 301 WVYGRIYLVSRPRRDRR 297

[Close]

BLAST of Lsi02G013500 vs. TAIR 10
Match: AT4G11960.1 (PGR5-like B )

HSP 1 Score: 61.6 bits (148), Expect = 1.3e-09
Identity = 51/187 (27.27%), Postives = 80/187 (42.78%), Query Frame = 0


Query: 72  EALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQSTYSDAEEDLS 131
           E  +L+A  AY SG P++ D+ +D++++KL+  GS+ V + PRCSLR +  YSD   D  
Sbjct: 129 EQRFLEASMAYVSGNPILSDEEYDKLKMKLKMDGSEIVCEGPRCSLRSKKVYSDLAIDYF 188

Query: 132 QVLALAGIWLVFLAIGCSACLVPLI---CTADLVFKDPLSLGLSYNSHGSAFEFLSAINA 191
           ++  L  +    +A+G    L  +     T  L   +P S           F + +A+ A
Sbjct: 189 KMF-LLNVPATVVALGLFFFLDDITGFEITYLLELPEPFSF---------IFTWFAAVPA 248

Query: 192 ILFMAFGSLIGYPIATASGKMDNACLFQTIYWLLAIAAVGVLQGLWRNDLVALKGACPNC 251
           I+++A                                    L  L   D + LKG CPNC
Sbjct: 249 IVYLALS----------------------------------LTKLILKDFLILKGPCPNC 271

Query: 252 GEEVFAF 256
           G E  +F
Sbjct: 309 GTENVSF 271

[Close]

BLAST of Lsi02G013500 vs. TAIR 10
Match: AT4G11960.2 (PGR5-like B )

HSP 1 Score: 61.6 bits (148), Expect = 1.3e-09
Identity = 51/187 (27.27%), Postives = 80/187 (42.78%), Query Frame = 0


Query: 72  EALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQSTYSDAEEDLS 131
           E  +L+A  AY SG P++ D+ +D++++KL+  GS+ V + PRCSLR +  YSD   D  
Sbjct: 112 EQRFLEASMAYVSGNPILSDEEYDKLKMKLKMDGSEIVCEGPRCSLRSKKVYSDLAIDYF 171

Query: 132 QVLALAGIWLVFLAIGCSACLVPLI---CTADLVFKDPLSLGLSYNSHGSAFEFLSAINA 191
           ++  L  +    +A+G    L  +     T  L   +P S           F + +A+ A
Sbjct: 172 KMF-LLNVPATVVALGLFFFLDDITGFEITYLLELPEPFSF---------IFTWFAAVPA 231

Query: 192 ILFMAFGSLIGYPIATASGKMDNACLFQTIYWLLAIAAVGVLQGLWRNDLVALKGACPNC 251
           I+++A                                    L  L   D + LKG CPNC
Sbjct: 232 IVYLALS----------------------------------LTKLILKDFLILKGPCPNC 254

Query: 252 GEEVFAF 256
           G E  +F
Sbjct: 292 GTENVSF 254

[Close]

BLAST of Lsi02G013500 vs. TAIR 10
Match: AT4G22890.1 (PGR5-LIKE A )

HSP 1 Score: 60.5 bits (145), Expect = 2.8e-09
Identity = 54/208 (25.96%), Postives = 85/208 (40.87%), Query Frame = 0


Query: 72  EALYLQARDAYYSGQPLILDDMFDRVELKLRWYGSKSVVKYPRCSLRRQSTYSDAEEDLS 131
           E  +L+A  AY SG P++ D+ +D+++LKL+  GS  V + PRCSLR +  YSD   D  
Sbjct: 140 EQRFLEASMAYVSGNPILNDEEYDKLKLKLKIDGSDIVSEGPRCSLRSKKVYSDLAVDYF 199

Query: 132 QVLALAGIWLVFLAIGCSACLVPLI---CTADLVFKDPLSLGLSYNSHGSAFEFLSAINA 191
           ++L L  +    +A+G    L  +     T  +   +P S           F + +A+  
Sbjct: 200 KML-LLNVPATVVALGLFFFLDDITGFEITYIMELPEPYSF---------IFTWFAAVPV 259

Query: 192 ILFMAFGSLIGYPIATASGKMDNACLFQTIYWLLAIAAVGVLQGLWRNDLVALKGACPNC 251
           I+++A                                    +  L   D + LKG CPNC
Sbjct: 260 IVYLALS----------------------------------ITKLIIKDFLILKGPCPNC 303

Query: 252 GEE---VFAFVRSDRANGSPHRSDCHVC 274
           G E    F  + S  + G  +   C  C
Sbjct: 320 GTENTSFFGTILSISSGGKTNTVKCTNC 303

The following BLAST results are available for this feature:

BLAST of Lsi02G013500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYC7	1.8e-08	27.27	PGR5-like protein 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGRL1B PE...	[more]
Q8H112	4.0e-08	25.96	PGR5-like protein 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGRL1A PE...	[more]

BLAST of Lsi02G013500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BED5	1.6e-148	87.18	PGR5-like protein 1A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194...	[more]
A0A1S3C6W2	1.6e-148	87.18	PGR5-like protein 1A, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497151 PE=4...	[more]
A0A0A0M0I2	4.6e-148	86.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G523060 PE=4 SV=1	[more]
A0A6J1HLH9	1.3e-139	84.29	uncharacterized protein LOC111464688 OS=Cucurbita moschata OX=3662 GN=LOC1114646...	[more]
A0A6J1GAD8	1.5e-138	82.90	PGR5-like protein 1A, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11145223...	[more]

BLAST of Lsi02G013500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894302.1	1.8e-154	91.03	PGR5-like protein 1A, chloroplastic [Benincasa hispida]	[more]
XP_008457470.1	3.2e-148	87.18	PREDICTED: PGR5-like protein 1A, chloroplastic [Cucumis melo] >KAA0067750.1 PGR5...	[more]
XP_004145292.1	9.4e-148	86.86	PGR5-like protein 1A, chloroplastic isoform X1 [Cucumis sativus]	[more]
KGN66159.2	8.3e-144	80.90	hypothetical protein Csa_019598 [Cucumis sativus]	[more]
KAG7036934.1	2.7e-142	85.16	PGR5-like protein 1B, chloroplastic, partial [Cucurbita argyrosperma subsp. argy...	[more]

BLAST of Lsi02G013500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59400.1	5.6e-90	56.51	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT5G59400.2	1.8e-88	56.15	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT4G11960.1	1.3e-09	27.27	PGR5-like B	[more]
AT4G11960.2	1.3e-09	27.27	PGR5-like B	[more]
AT4G22890.1	2.8e-09	25.96	PGR5-LIKE A	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31032:SF2	PGR5-LIKE A PROTEIN	coord: 8..307
IPR039987	PGR5-like protein 1	PANTHER	PTHR31032	PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC	coord: 8..307

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G013500.1	Lsi02G013500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0015031	protein transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016730	oxidoreductase activity, acting on iron-sulfur proteins as donors