Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAGTAATGCGCCACCGCACCGGCCGCCGTCCGCTCCGCCACTGGCAGCCATAGATCGATTTCTCTGCAGCCATAACGTGAATGGCAATTGCTTTGAGAAAGGGTTGATCGGAGGGTTCTCGCCAGAAAGTTGCAGCGGAGGAAGCGGTGGCGAGTGGATTGAGATTGAAAGGCGGCGGCGCGTGGAGGAAGAATTAGAAGAAGAAGAAGAAGAAGAAATGTATGGATGGGGAAGAAAAAATAATGAAGGAAATTGTGAAATGGGTTTGAATGAACTGATGATTAGATCAAATAATGAAGGGAAAATTTGTTCCAAATTCAAGAAATTTAAAAAGGGTTCTTCTGCAAATTTGATTAAAGGACAGTGGAGTGAAGAAGAAGACAGGTGA
mRNA sequence
ATGAAGAGTAATGCGCCACCGCACCGGCCGCCGTCCGCTCCGCCACTGGCAGCCATAGATCGATTTCTCTGCAGCCATAACGTGAATGGCAATTGCTTTGAGAAAGGGTTGATCGGAGGGTTCTCGCCAGAAAGTTGCAGCGGAGGAAGCGGTGGCGAGTGGATTGAGATTGAAAGGCGGCGGCGCGTGGAGGAAGAATTAGAAGAAGAAGAAGAAGAAGAAATGTATGGATGGGGAAGAAAAAATAATGAAGGAAATTGTGAAATGGGTTTGAATGAACTGATGATTAGATCAAATAATGAAGGGAAAATTTGTTCCAAATTCAAGAAATTTAAAAAGGGTTCTTCTGCAAATTTGATTAAAGGACAGTGGAGTGAAGAAGAAGACAGGTGA
Coding sequence (CDS)
ATGAAGAGTAATGCGCCACCGCACCGGCCGCCGTCCGCTCCGCCACTGGCAGCCATAGATCGATTTCTCTGCAGCCATAACGTGAATGGCAATTGCTTTGAGAAAGGGTTGATCGGAGGGTTCTCGCCAGAAAGTTGCAGCGGAGGAAGCGGTGGCGAGTGGATTGAGATTGAAAGGCGGCGGCGCGTGGAGGAAGAATTAGAAGAAGAAGAAGAAGAAGAAATGTATGGATGGGGAAGAAAAAATAATGAAGGAAATTGTGAAATGGGTTTGAATGAACTGATGATTAGATCAAATAATGAAGGGAAAATTTGTTCCAAATTCAAGAAATTTAAAAAGGGTTCTTCTGCAAATTTGATTAAAGGACAGTGGAGTGAAGAAGAAGACAGGTGA
Protein sequence
MKSNAPPHRPPSAPPLAAIDRFLCSHNVNGNCFEKGLIGGFSPESCSGGSGGEWIEIERRRRVEEELEEEEEEEMYGWGRKNNEGNCEMGLNELMIRSNNEGKICSKFKKFKKGSSANLIKGQWSEEEDR
Homology
BLAST of Lsi02G012940 vs. ExPASy TrEMBL
Match:
A0A1S3C5S6 (protein ODORANT1 OS=Cucumis melo OX=3656 GN=LOC103497228 PE=4 SV=1)
HSP 1 Score: 193.7 bits (491), Expect = 4.7e-46
Identity = 109/141 (77.30%), Postives = 117/141 (82.98%), Query Frame = 0
Query: 1 MKSNAPPHRPPSAPPLAAIDRFLCSHNVNGNCFEKGLIGGFSPESCSGGSGGEWIEIERR 60
M+SNAP PPSAPPLAAIDRFL SHNVNGNCF+KGLIGG SPE C GGSGGEWIEIE+R
Sbjct: 1 MQSNAP---PPSAPPLAAIDRFLYSHNVNGNCFQKGLIGGLSPEICGGGSGGEWIEIEKR 60
Query: 61 RRVE-------EELEEEEEEE-MYGWGRKNNEGNCEMGLNELMIRSN--NEGKIC-SKFK 120
RRVE EELEEEEEEE MYGWGRKNN NCEMG E+MIRS+ NE K+C SKFK
Sbjct: 61 RRVEEKLELEIEELEEEEEEEIMYGWGRKNN-NNCEMGFKEMMIRSSNINEVKVCSSKFK 120
Query: 121 KFKKGSSANLIKGQWSEEEDR 131
KFKK SSA+LIKGQW+EEEDR
Sbjct: 121 KFKKRSSASLIKGQWTEEEDR 137
BLAST of Lsi02G012940 vs. ExPASy TrEMBL
Match:
A0A0A0LVH8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G529120 PE=4 SV=1)
HSP 1 Score: 177.9 bits (450), Expect = 2.6e-41
Identity = 106/146 (72.60%), Postives = 113/146 (77.40%), Query Frame = 0
Query: 1 MKSNAPPHRPPSAPPLAAIDRFLCSHNVNG-NCFEKGLIGGFSPESC---SGGSGGEWIE 60
M SNAPP P + PPLAAIDRFL SHNVNG NCFEKGLIGG SPE C SGGSGGEWIE
Sbjct: 1 MHSNAPP--PSAVPPLAAIDRFLYSHNVNGNNCFEKGLIGGLSPEICGGGSGGSGGEWIE 60
Query: 61 IERRRRVEEEL---------EEEEEEEMYGWGRKNNEGNCEMGLNELMIRSN--NEGKIC 120
+E+RRRVEE+L EEEEEE YGWGRKNN N EMG E+MIRS+ NE KIC
Sbjct: 61 VEKRRRVEEKLELGIEEDEEEEEEEEVTYGWGRKNN-NNSEMGFEEMMIRSSNINEVKIC 120
Query: 121 -SKFKKFKKGSSANLIKGQWSEEEDR 131
SKFKKFKK SSANLIKGQW+EEEDR
Sbjct: 121 SSKFKKFKKRSSANLIKGQWTEEEDR 143
BLAST of Lsi02G012940 vs. ExPASy TrEMBL
Match:
A0A6J1I2P9 (transcription factor MYB64-like OS=Cucurbita maxima OX=3661 GN=LOC111469383 PE=4 SV=1)
HSP 1 Score: 162.5 bits (410), Expect = 1.2e-36
Identity = 96/144 (66.67%), Postives = 103/144 (71.53%), Query Frame = 0
Query: 1 MKSNAPPHRPPSAPPLAAIDRFLCSHNVNGNCFEKGLI-GGFSPESCSGGSGGEWIEIER 60
M+SNA PPS PPLAAIDRFL SHNVNGNCFE GL+ GG SPESC GGEW E +
Sbjct: 1 MQSNA----PPSGPPLAAIDRFLYSHNVNGNCFENGLMGGGLSPESC----GGEWFETDG 60
Query: 61 RRRVE-----------EELEEEEE--EEMYGWGRKNNEGNCEMGLNELMIRSNNEGKICS 120
R RVE EELEEEEE EEMYGWGR+ EG CEMGL E M+ N+EGKICS
Sbjct: 61 RLRVEEALRFQLELELEELEEEEEEFEEMYGWGRR-KEGKCEMGLKEAMVSPNHEGKICS 120
Query: 121 KFKKFKKGSSANLIKGQWSEEEDR 131
K KK KK SSA LIKGQW+EEEDR
Sbjct: 121 KLKKLKKPSSAILIKGQWTEEEDR 135
BLAST of Lsi02G012940 vs. ExPASy TrEMBL
Match:
A0A6J1HLU2 (transcription factor MYB64-like OS=Cucurbita moschata OX=3662 GN=LOC111464737 PE=4 SV=1)
HSP 1 Score: 139.4 bits (350), Expect = 1.0e-29
Identity = 87/147 (59.18%), Postives = 96/147 (65.31%), Query Frame = 0
Query: 1 MKSNAPPHRPPSAPPLAAIDRFLCSHNVNGNCFEKGLI-GGFSPESCSGGSGGEWIEIER 60
M+SNA PPS PPLAAIDRFL SHNVNGNCFE GL+ GG SPESC GGEW E++
Sbjct: 1 MQSNA----PPSGPPLAAIDRFLYSHNVNGNCFENGLMGGGLSPESC----GGEWFEMDG 60
Query: 61 RRRVE--------------EELE--EEEEEEMYGWGRKNNEGNCEMGLNELMIRSNNEGK 120
R RVE EELE EEE+ EMYGWGR+N + MI N+E K
Sbjct: 61 RLRVEEALRLQIELELEELEELEELEEEDSEMYGWGRRNE--------GKAMITPNHERK 120
Query: 121 ICSKFKKFKKGSSANLIKGQWSEEEDR 131
ICSK KK KK SSA LIKGQW+EEEDR
Sbjct: 121 ICSKLKKLKKPSSAILIKGQWTEEEDR 131
BLAST of Lsi02G012940 vs. ExPASy TrEMBL
Match:
A0A5A7SM24 (Myb-related protein 315 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00530 PE=4 SV=1)
HSP 1 Score: 114.8 bits (286), Expect = 2.8e-22
Identity = 62/81 (76.54%), Postives = 66/81 (81.48%), Query Frame = 0
Query: 1 MKSNAPPHRPPSAPPLAAIDRFLCSHNVNGNCFEKGLIGGFSPESCSGGSGGEWIEIERR 60
M+SNAP PPSAPPLAAIDRFL SHNVNGNCF+KGLIGG SPE C GGSGG+WIEIE+
Sbjct: 1 MQSNAP---PPSAPPLAAIDRFLYSHNVNGNCFQKGLIGGLSPEICGGGSGGKWIEIEKC 60
Query: 61 RRVE-------EELEEEEEEE 75
RRVE EELEEEEEEE
Sbjct: 61 RRVEEKLELEIEELEEEEEEE 78
BLAST of Lsi02G012940 vs. NCBI nr
Match:
XP_008457563.1 (PREDICTED: protein ODORANT1 [Cucumis melo])
HSP 1 Score: 193.7 bits (491), Expect = 9.6e-46
Identity = 109/141 (77.30%), Postives = 117/141 (82.98%), Query Frame = 0
Query: 1 MKSNAPPHRPPSAPPLAAIDRFLCSHNVNGNCFEKGLIGGFSPESCSGGSGGEWIEIERR 60
M+SNAP PPSAPPLAAIDRFL SHNVNGNCF+KGLIGG SPE C GGSGGEWIEIE+R
Sbjct: 1 MQSNAP---PPSAPPLAAIDRFLYSHNVNGNCFQKGLIGGLSPEICGGGSGGEWIEIEKR 60
Query: 61 RRVE-------EELEEEEEEE-MYGWGRKNNEGNCEMGLNELMIRSN--NEGKIC-SKFK 120
RRVE EELEEEEEEE MYGWGRKNN NCEMG E+MIRS+ NE K+C SKFK
Sbjct: 61 RRVEEKLELEIEELEEEEEEEIMYGWGRKNN-NNCEMGFKEMMIRSSNINEVKVCSSKFK 120
Query: 121 KFKKGSSANLIKGQWSEEEDR 131
KFKK SSA+LIKGQW+EEEDR
Sbjct: 121 KFKKRSSASLIKGQWTEEEDR 137
BLAST of Lsi02G012940 vs. NCBI nr
Match:
XP_022970380.1 (transcription factor MYB64-like [Cucurbita maxima])
HSP 1 Score: 162.5 bits (410), Expect = 2.4e-36
Identity = 96/144 (66.67%), Postives = 103/144 (71.53%), Query Frame = 0
Query: 1 MKSNAPPHRPPSAPPLAAIDRFLCSHNVNGNCFEKGLI-GGFSPESCSGGSGGEWIEIER 60
M+SNA PPS PPLAAIDRFL SHNVNGNCFE GL+ GG SPESC GGEW E +
Sbjct: 1 MQSNA----PPSGPPLAAIDRFLYSHNVNGNCFENGLMGGGLSPESC----GGEWFETDG 60
Query: 61 RRRVE-----------EELEEEEE--EEMYGWGRKNNEGNCEMGLNELMIRSNNEGKICS 120
R RVE EELEEEEE EEMYGWGR+ EG CEMGL E M+ N+EGKICS
Sbjct: 61 RLRVEEALRFQLELELEELEEEEEEFEEMYGWGRR-KEGKCEMGLKEAMVSPNHEGKICS 120
Query: 121 KFKKFKKGSSANLIKGQWSEEEDR 131
K KK KK SSA LIKGQW+EEEDR
Sbjct: 121 KLKKLKKPSSAILIKGQWTEEEDR 135
BLAST of Lsi02G012940 vs. NCBI nr
Match:
KAG7019144.1 (Transcription factor MYB98, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 143.3 bits (360), Expect = 1.5e-30
Identity = 88/144 (61.11%), Postives = 96/144 (66.67%), Query Frame = 0
Query: 1 MKSNAPPHRPPSAPPLAAIDRFLCSHNVNGNCFEKGLI-GGFSPESCSGGSGGEWIEIER 60
M+SNA PPS PPLAAIDRFL SHN NGNCFE GL+ GG SPE C GGEW E++
Sbjct: 1 MQSNA----PPSGPPLAAIDRFLYSHNANGNCFENGLMGGGLSPERC----GGEWFEMDG 60
Query: 61 RRRVE-----------EELEEEEEE--EMYGWGRKNNEGNCEMGLNELMIRSNNEGKICS 120
R RVE EELEEEEEE EMYGWGR+N + MI N+EGKICS
Sbjct: 61 RLRVEEALRLELDLELEELEEEEEEDSEMYGWGRRNE--------GKAMITPNHEGKICS 120
Query: 121 KFKKFKKGSSANLIKGQWSEEEDR 131
K KK KK SSA LIKGQW+EEEDR
Sbjct: 121 KLKKLKKPSSAILIKGQWTEEEDR 128
BLAST of Lsi02G012940 vs. NCBI nr
Match:
KAG6583375.1 (Transcription factor MYB119, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 140.2 bits (352), Expect = 1.3e-29
Identity = 87/144 (60.42%), Postives = 95/144 (65.97%), Query Frame = 0
Query: 1 MKSNAPPHRPPSAPPLAAIDRFLCSHNVNGNCFEKGLI-GGFSPESCSGGSGGEWIEIER 60
M+SNA PS PPLAAIDRFL SHN NGNCFE GL+ GG SPE C GGEW E++
Sbjct: 1 MQSNA----APSGPPLAAIDRFLYSHNANGNCFENGLMGGGLSPERC----GGEWFEMDG 60
Query: 61 RRRVE-----------EELEEEEEE--EMYGWGRKNNEGNCEMGLNELMIRSNNEGKICS 120
R RVE EELEEEEEE EMYGWGR+N + MI N+EGKICS
Sbjct: 61 RLRVEEALRLELDLELEELEEEEEEDSEMYGWGRRNE--------GKAMITPNHEGKICS 120
Query: 121 KFKKFKKGSSANLIKGQWSEEEDR 131
K KK KK SSA LIKGQW+EEEDR
Sbjct: 121 KLKKLKKPSSAILIKGQWTEEEDR 128
BLAST of Lsi02G012940 vs. NCBI nr
Match:
XP_022964748.1 (transcription factor MYB64-like [Cucurbita moschata])
HSP 1 Score: 139.4 bits (350), Expect = 2.2e-29
Identity = 87/147 (59.18%), Postives = 96/147 (65.31%), Query Frame = 0
Query: 1 MKSNAPPHRPPSAPPLAAIDRFLCSHNVNGNCFEKGLI-GGFSPESCSGGSGGEWIEIER 60
M+SNA PPS PPLAAIDRFL SHNVNGNCFE GL+ GG SPESC GGEW E++
Sbjct: 1 MQSNA----PPSGPPLAAIDRFLYSHNVNGNCFENGLMGGGLSPESC----GGEWFEMDG 60
Query: 61 RRRVE--------------EELE--EEEEEEMYGWGRKNNEGNCEMGLNELMIRSNNEGK 120
R RVE EELE EEE+ EMYGWGR+N + MI N+E K
Sbjct: 61 RLRVEEALRLQIELELEELEELEELEEEDSEMYGWGRRNE--------GKAMITPNHERK 120
Query: 121 ICSKFKKFKKGSSANLIKGQWSEEEDR 131
ICSK KK KK SSA LIKGQW+EEEDR
Sbjct: 121 ICSKLKKLKKPSSAILIKGQWTEEEDR 131
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A1S3C5S6 | 4.7e-46 | 77.30 | protein ODORANT1 OS=Cucumis melo OX=3656 GN=LOC103497228 PE=4 SV=1 | [more] |
| A0A0A0LVH8 | 2.6e-41 | 72.60 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G529120 PE=4 SV=1 | [more] |
| A0A6J1I2P9 | 1.2e-36 | 66.67 | transcription factor MYB64-like OS=Cucurbita maxima OX=3661 GN=LOC111469383 PE=4... | [more] |
| A0A6J1HLU2 | 1.0e-29 | 59.18 | transcription factor MYB64-like OS=Cucurbita moschata OX=3662 GN=LOC111464737 PE... | [more] |
| A0A5A7SM24 | 2.8e-22 | 76.54 | Myb-related protein 315 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_008457563.1 | 9.6e-46 | 77.30 | PREDICTED: protein ODORANT1 [Cucumis melo] | [more] |
| XP_022970380.1 | 2.4e-36 | 66.67 | transcription factor MYB64-like [Cucurbita maxima] | [more] |
| KAG7019144.1 | 1.5e-30 | 61.11 | Transcription factor MYB98, partial [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
| KAG6583375.1 | 1.3e-29 | 60.42 | Transcription factor MYB119, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
| XP_022964748.1 | 2.2e-29 | 59.18 | transcription factor MYB64-like [Cucurbita moschata] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
