Lsi02G012670 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G012670
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	ran-binding protein 1 homolog a
Location	chr02: 16801007 .. 16805209 (-)
RNA-Seq Expression	Lsi02G012670
Synteny	Lsi02G012670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAGCACCGATACCGAACGCAGAGAAGAGGAGGAGGCTCCGGCCGGAGAGGATGAAGACACTGGAGCTCAAGTTGCCCCAATCGTCAAGTTGGAGGAGGTCACCGTCACCACCGGTGAAGAAAATGAAGACGCTATTCTCGATCTGTATGCTTTTCTCTTTACTTCTTTATCTGATCTACTCAATCTAGGTTTTAATCTGATTGCTTTTTTCATGTGGGTTATTCGTATTCGTTGTTTTAGGAAATCCAAACTGTACCGATTCGATAAGGATGGAAATCAGTGGAAGGAGAGGGGTGCTGGTACTGTTAAGTTTTTGAAACATAAGGAGACTGGCAAGGTTCGCCTTGTTATGAGACAGTCTAAAACCCTCAAGATCTGCGCTAACCATCTAGGTTTGTTCTCACTTCTCTACTTGTTCCTTCGCGTATATATCAAGCTTCTTTGAGTTTATGTTTTCCCCCCCTTGATTTAGCTTTAGTTTTTTCATTTTATCGTTTGATTTGTCGTGATTGTAGTACTTCCATCAATGACGGTTCAAGAACACGTTGGAAATGAGAAGTCGTGCGTGTGGCATGCGACTGACTTTGCTGATGGTGAATTGAAAGATGAGCTTTTTTGTATCAGATTCCCATCTATTGATAGTGAGTACAACTCTGAATCTTTCTTCTCCCTAAATCTTGGCTGTAGATTGACTTATAGACTCTCTGGGTATATTGATATCTGGTATCTGGTAGTGGGCAATGTGACTGTTAAAAAATGAATCTTATATTGTTTCACGTTTTGTGTTTTCTTTTCCCCTTCCGAATAAATTATATGTTAGAGCTCTCTAGTTGTGTAATTGTGTCCGGGTCAAAGTACCGCTGGGATAATTCTTTTCACTGACAATCTTTTTCTTTTTCCTTTTTTTCTTCTGTATCTGCTTTTAATGCGGTTTGGTTTGTACAATTTTTCATCATAAGACATTACAGTATTCTCATGGTACGCTTTTATGTTGAACGTTTTCTTGATGCCTATCAATACTTGGTGCTGCTAAAGATTAAAGAGTGGGATTTATTCTTAAAATCGATTGTGTAGTATGTTCATCATGGTAACTTTGTCCTTGAAATTTTTACTTCTCTGCTGATTTTTACTGTTGACTCTATCCATAAAAATATATATTTTTATTTTCATTAACATTTGTTTTCTCTATTTAAGAAATGGGAAGTTATCTATTCCTAGATCCATCTCTGTTAATACGCACAGTTTCTTCAGTTATTTAATTCTGTACATGTCAACGTTGTATGCCAGTTGTTTTGGCAATGGAAGAGTTGGAGTCGGTGCCTGAAAAGAGGAAGTATAATATATAATTGCAATTTTATATAATGATAGTTCGCTAATAAAATTTGATAGAAAAAGGTAGGTGAAGGGTGAGTGAGTGGTTTCATTGGTGAATAGCCAGTTGTAATTTTACTTTTAGAGGATTTTAAGTGATGATACCTAGAAGAGAAAGGCTGGAAGACAGTAATGGTAGGGATGGGATGGAAATTTCCCAGTTAACAATTATCTGTGGCTGGTGTTGCCCTTTGAGGTGTGTAATTGATACATCGAATATGTTCTGGGTTTTCATCCTTAAATGCAGTGTGCCTCTCTGCACGAGATACATCGAAACTGTTTTGATGTAGCTTAGGTAATTTTAATTTTATTTAGACCTCCCTTTCCATGCATCACAAGCTTCCAATGATGTCTTCAATGACTATTAGTCCAAATTTATCTAGGAATTAGGTTCTTTATCATTGTAATTCTCAATAAGATAGGAAACCCTGGATCTAATAAACCCATCCAAGAGGCTGGTCCTTTTCTTTCCCTTTCTTGAGGGTGGTGAGCGAGGAAGTCTTCTGAATAAATTTAAGCATCATCTCTGCCATGGCTTCATATCATTGTGTCAGCTAGGAACTCAATCTGTGACTTCGAAATTAACTCAAGTCAAGGGTCTTGCAGTTATCTTTTATCTGTTCCTGTTTTTATATTTACTAAATTATCAATCTTAACCACACAGTATAATGAATTAGTTTCTGGTCATATTTGACTTACAAAGCATGGAGACAGGCATTTTGGCAGCTTAGATATAAAAGACACTAAATGACATGCATTGATTTCTAGATTTTAGAGGCTTTGACACGCTGCACATTGTATTCATTGTTTTATTTTTAGTGTATTTGAAATGGGAAAAATCTGCTGTTACCATTTGTATTTCACAGCCCTTCAGCTCATTTTATTATTTTTCTATTTATTTTACTTCTCCTACTCTAGTATCGTTCAGTCTAAAATAGTTTCTCATCTAGTCATTCTTAATTTTCATTTATTTCTTCCGAAGTGTCTTGCATGTCTTTGGACTTTTCTACGCATGCTTGTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCCTTGGATACTAAATCTTTTCTTTATACTAGACTGCAAAACCTTCATGGAGAAACGTTCCCAGAAGTCCTCTAGTCCCAAAAGATAGATATAGTTTATTAACTGTGCTAATCAGCTTTTCCCCCTTGGTTATTTACTTTTTATTATTATTAATTCTTTTTTGGGTATTATTAGACTGCAAGACCTTCATGGAAACATTCCAAGAAGTTGCCGAGTCCCAAAAGAAGAAAGAGGAAAATAAAGATGCATCAGCAGCAGCCGGTCTACTTGAAAAATTGAGTGTTGAAGACGAAAAGAAAGCCGAAGATAAAGCTGAAGATAAAGCTGAGGACACACCTGTAAAATCTAAGGAAGAGGATAAACCTGAGGGCGAGGAAGGGAAATCGGATGCAGAGAAAGACTAGGAGCCTGTTTCCTCTGCCAGATAATATACGGTAGGATATAAAGCTCTTCCTCTACCGGATACGTCTCATTCATCCATGTCTTGGTACATTAAAACACAGTCGATTCTTGAATTGGGTAACTTTTCTGGGCTGGAAAGTTAAAAGAGTTGTCTAAACGTATGTTCGTTGGTTGGTCGGTCGGTTGGGGAGTTGTTTTCTATTGTTCTCCTTCCTTTCCTTTCCTTTCAAAATGAGATTGATTTGTAGTCAGTTTCAAATGGTTGGTTGTGTGGTGATGGCCGTATGTGGATCCTCAAAGGTCAAACAAATAGCAATTTTAGAAACCATAAAGTTTGTGTGCAGGGCCTGAGCTGAAGATGCTGCAAGGGTGGGTTGGGTTAGTAGCCAAACAAGAGTATTTGCAGAGACATATATACTTCTTTTTGCTTGAGGAAAACATGGTTGGTTGGTTGTTGTGGTCTTATTTTATAATTTAAGTTCTAGGCCTATTCTATTGTGCACTGTGCTTTCTTTTTTGGATTGCTTTCTATTTACCACGGTTTTTCTGGATATGATTTGTAGTTTTGTATAAACTGCTTCTTTAAGCGAGGCCATTGAAATTTCTTTTTTGTTTCTTGTTTGGCGTGAGGATGGTATTATTTTTCTACAAAGTAGCACAAATAATGTTATTTTTCTACAAAGTAGCACAACTCTAAAAAATGACTAAGCAATGACTTGAG

mRNA sequence

ATGGCGAGCACCGATACCGAACGCAGAGAAGAGGAGGAGGCTCCGGCCGGAGAGGATGAAGACACTGGAGCTCAAGTTGCCCCAATCGTCAAGTTGGAGGAGGTCACCGTCACCACCGGTGAAGAAAATGAAGACGCTATTCTCGATCTGAAATCCAAACTGTACCGATTCGATAAGGATGGAAATCAGTGGAAGGAGAGGGGTGCTGGTACTGTTAAGTTTTTGAAACATAAGGAGACTGGCAAGGTTCGCCTTGTTATGAGACAGTCTAAAACCCTCAAGATCTGCGCTAACCATCTAGTACTTCCATCAATGACGGTTCAAGAACACGTTGGAAATGAGAAGTCGTGCGTGTGGCATGCGACTGACTTTGCTGATGGTGAATTGAAAGATGAGCTTTTTTGTATCAGATTCCCATCTATTGATAACTGCAAGACCTTCATGGAAACATTCCAAGAAGTTGCCGAGTCCCAAAAGAAGAAAGAGGAAAATAAAGATGCATCAGCAGCAGCCGGTCTACTTGAAAAATTGAGTGTTGAAGACGAAAAGAAAGCCGAAGATAAAGCTGAAGATAAAGCTGAGGACACACCTGTAAAATCTAAGGAAGAGGATAAACCTGAGGGCGAGGAAGGGAAATCGGATGCAGAGAAAGACTAGGAGCCTGTTTCCTCTGCCAGATAATATACGGTAGGATATAAAGCTCTTCCTCTACCGGATACGTCTCATTCATCCATGTCTTGGTACATTAAAACACAGTCGATTCTTGAATTGGGTAACTTTTCTGGGCTGGAAAGTTAAAAGAGTTGTCTAAACGTATGTTCGTTGGTTGGTCGGTCGGTTGGGGAGTTGTTTTCTATTGTTCTCCTTCCTTTCCTTTCCTTTCAAAATGAGATTGATTTGTAGTCAGTTTCAAATGGTTGGTTGTGTGGTGATGGCCGTATGTGGATCCTCAAAGGTCAAACAAATAGCAATTTTAGAAACCATAAAGTTTGTGTGCAGGGCCTGAGCTGAAGATGCTGCAAGGGTGGGTTGGGTTAGTAGCCAAACAAGAGTATTTGCAGAGACATATATACTTCTTTTTGCTTGAGGAAAACATGGTTGGTTGGTTGTTGTGGTCTTATTTTATAATTTAAGTTCTAGGCCTATTCTATTGTGCACTGTGCTTTCTTTTTTGGATTGCTTTCTATTTACCACGGTTTTTCTGGATATGATTTGTAGTTTTGTATAAACTGCTTCTTTAAGCGAGGCCATTGAAATTTCTTTTTTGTTTCTTGTTTGGCGTGAGGATGGTATTATTTTTCTACAAAGTAGCACAAATAATGTTATTTTTCTACAAAGTAGCACAACTCTAAAAAATGACTAAGCAATGACTTGAG

Coding sequence (CDS)

ATGGCGAGCACCGATACCGAACGCAGAGAAGAGGAGGAGGCTCCGGCCGGAGAGGATGAAGACACTGGAGCTCAAGTTGCCCCAATCGTCAAGTTGGAGGAGGTCACCGTCACCACCGGTGAAGAAAATGAAGACGCTATTCTCGATCTGAAATCCAAACTGTACCGATTCGATAAGGATGGAAATCAGTGGAAGGAGAGGGGTGCTGGTACTGTTAAGTTTTTGAAACATAAGGAGACTGGCAAGGTTCGCCTTGTTATGAGACAGTCTAAAACCCTCAAGATCTGCGCTAACCATCTAGTACTTCCATCAATGACGGTTCAAGAACACGTTGGAAATGAGAAGTCGTGCGTGTGGCATGCGACTGACTTTGCTGATGGTGAATTGAAAGATGAGCTTTTTTGTATCAGATTCCCATCTATTGATAACTGCAAGACCTTCATGGAAACATTCCAAGAAGTTGCCGAGTCCCAAAAGAAGAAAGAGGAAAATAAAGATGCATCAGCAGCAGCCGGTCTACTTGAAAAATTGAGTGTTGAAGACGAAAAGAAAGCCGAAGATAAAGCTGAAGATAAAGCTGAGGACACACCTGTAAAATCTAAGGAAGAGGATAAACCTGAGGGCGAGGAAGGGAAATCGGATGCAGAGAAAGACTAG

Protein sequence

MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKDGNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWHATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVEDEKKAEDKAEDKAEDTPVKSKEEDKPEGEEGKSDAEKD

Homology

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BLAST of Lsi02G012670 vs. ExPASy Swiss-Prot
Match: Q9LMK7 (Ran-binding protein 1 homolog a OS=Arabidopsis thaliana OX=3702 GN=RANBP1A PE=1 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 7.5e-78
Identity = 160/212 (75.47%), Postives = 179/212 (84.43%), Query Frame = 0


Query: 7   ERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKDGNQWKE 66
           E R+EEEA A EDEDTGAQVAPIV+LEEV VTTGEE+EDA+LDLKSKLYRFDKD NQWKE
Sbjct: 9   EHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDKDANQWKE 68

Query: 67  RGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWHATDFAD 126
           RGAGTVKFLKHK TGK+RLVMRQSKTLKICANH V   M+VQEHVGNEKSCVWHA DFAD
Sbjct: 69  RGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVWHARDFAD 128

Query: 127 GELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVEDEKKAE 186
           GELKDELFCIRF SI+NCKTFM+ F+EVAES+++KEE+KDA+  AGLLEKL+VE E K E
Sbjct: 129 GELKDELFCIRFASIENCKTFMQKFKEVAESEEEKEESKDAADTAGLLEKLTVE-ETKTE 188

Query: 187 DKAEDKAEDT-PVKSKEEDKPEGEEGKSDAEK 218
           +K E KA +T   + K E+K E E  KS   K
Sbjct: 189 EKTEAKAVETAKTEVKAEEKKESEAEKSGEAK 219

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BLAST of Lsi02G012670 vs. ExPASy Swiss-Prot
Match: Q8RWG8 (Ran-binding protein 1 homolog b OS=Arabidopsis thaliana OX=3702 GN=RANBP1B PE=1 SV=2)

HSP 1 Score: 279.6 bits (714), Expect = 2.9e-74
Identity = 148/205 (72.20%), Postives = 173/205 (84.39%), Query Frame = 0


Query: 5   DTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKDGNQW 64
           + E R+EEE  A EDEDTGAQVAPIV+LEEV VTTGEE+ED ILDLKSKLYRFDKDG+QW
Sbjct: 9   ERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQW 68

Query: 65  KERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWHATDF 124
           KERGAGTVKFLKH+ +GK+RLVMRQSKTLKICANHLV   M+VQEH GN+KSCVWHA DF
Sbjct: 69  KERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDF 128

Query: 125 ADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVEDEKK 184
           +DGELKDELFCIRF S++NCK FM+ F+EVAES+++KEE+KDAS  AGLLEKL+VE EK+
Sbjct: 129 SDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKLTVE-EKE 188

Query: 185 AEDKAEDKAEDTPVKSKEEDKPEGE 210
           +E K  +KAE+       E+K   E
Sbjct: 189 SEKKPVEKAEENKKSEAVEEKKTEE 212

[Close]

BLAST of Lsi02G012670 vs. ExPASy Swiss-Prot
Match: P92985 (Ran-binding protein 1 homolog c OS=Arabidopsis thaliana OX=3702 GN=RANBP1C PE=2 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.1e-73
Identity = 153/218 (70.18%), Postives = 177/218 (81.19%), Query Frame = 0


Query: 1   MASTDTER-REEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDK 60
           MAST+ ER   E+E    EDEDTGAQVAPIV+LEEV VTTGEE+EDA+LDLKSK+YRFDK
Sbjct: 1   MASTEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDK 60

Query: 61  DGNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVW 120
           +GNQWKERGAGTVK LKHKETGKVRLVMRQSKTLKICANHL+   M+VQEH GNEKSC+W
Sbjct: 61  EGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLW 120

Query: 121 HATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSV 180
           HATDF+DGELKDELFCIRF SI+NCKTFME F E+AESQ+  +E+     AAGL+E LSV
Sbjct: 121 HATDFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSV 180

Query: 181 EDEKKAEDKAEDKAEDTPVKSKEEDKPE--GEEGKSDA 216
           E E  +E+KA++  E  P K  +E K E   EE K++A
Sbjct: 181 E-ENISEEKAKEAEEKEPAKEDKETKKEKVEEEKKTEA 217

[Close]

BLAST of Lsi02G012670 vs. ExPASy Swiss-Prot
Match: Q09717 (Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sbp1 PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.1e-31
Identity = 72/160 (45.00%), Postives = 97/160 (60.62%), Query Frame = 0


Query: 2   ASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKDG 61
           AST+ E++  E     E         PIVKL  V   T EE E     +++KL+RFDK  
Sbjct: 51  ASTNDEKKPAEGDEDAEPASPEVHFEPIVKLSAVETKTNEEEETVEFKMRAKLFRFDKAA 110

Query: 62  NQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH- 121
           ++WKERG G  + LKHKETGK RLVMR+ KTLK+CANHL++P M +  +VG+++S VW  
Sbjct: 111 SEWKERGTGDARLLKHKETGKTRLVMRRDKTLKVCANHLLMPEMKLTPNVGSDRSWVWTV 170

Query: 122 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKK 161
           A D ++GE   E F IRF + +N   F E F++  E   K
Sbjct: 171 AADVSEGEPTAETFAIRFANSENANLFKENFEKYQEENAK 210

[Close]

BLAST of Lsi02G012670 vs. ExPASy Swiss-Prot
Match: P41920 (Ran-specific GTPase-activating protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YRB1 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-30
Identity = 72/159 (45.28%), Postives = 103/159 (64.78%), Query Frame = 0


Query: 5   DTERREEEEAPAGED--EDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKDGN 64
           D E  +EE    G+D  E       P+V LE+V V T EE+E+ +  +++KL+RFD D  
Sbjct: 42  DEEDTKEETKKEGDDAPESPDIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRFDADAK 101

Query: 65  QWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWHAT 124
           +WKERG G  KFLK+K+T KVR++MR+ KTLKICANH++ P  T++ +VG+++S V+  T
Sbjct: 102 EWKERGTGDCKFLKNKKTNKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACT 161

Query: 125 -DFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKK 161
            D A+GE +   F IRF S +N   F E F++  E  KK
Sbjct: 162 ADIAEGEAEAFTFAIRFGSKENADKFKEEFEKAQEINKK 200

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BLAST of Lsi02G012670 vs. ExPASy TrEMBL
Match: A0A5A7UVN5 (Ran-binding protein 1-like protein a-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00850 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 5.1e-106
Identity = 208/217 (95.85%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS+DTERREEEEAPA EDEDTGAQVAPIVKLE V VTTGEE+EDAILDLKSKLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETG+VRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKK ENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKAEDKAEDTPVKSKEEDKPEGEEGKSDAEK 218
           DEKKAEDK+EDKAEDTPVKSKEEDKPEGE GKSDAEK
Sbjct: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEK 217

[Close]

BLAST of Lsi02G012670 vs. ExPASy TrEMBL
Match: A0A0A0LXN6 (RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G532320 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 5.1e-106
Identity = 208/217 (95.85%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS+DTERREEEEAPA EDEDTGAQVAPIVKLE V VTTGEE+EDAILDLKSKLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETG+VRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKK ENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKAEDKAEDTPVKSKEEDKPEGEEGKSDAEK 218
           DEKKAEDK+EDKAEDTPVKSKEEDKPEGE GKSDAEK
Sbjct: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEK 217

[Close]

BLAST of Lsi02G012670 vs. ExPASy TrEMBL
Match: A0A1S3C5A9 (ran-binding protein 1 homolog a OS=Cucumis melo OX=3656 GN=LOC103497065 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 5.1e-106
Identity = 208/217 (95.85%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS+DTERREEEEAPA EDEDTGAQVAPIVKLE V VTTGEE+EDAILDLKSKLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETG+VRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKK ENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKAEDKAEDTPVKSKEEDKPEGEEGKSDAEK 218
           DEKKAEDK+EDKAEDTPVKSKEEDKPEGE GKSDAEK
Sbjct: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEK 217

[Close]

BLAST of Lsi02G012670 vs. ExPASy TrEMBL
Match: A0A6J1I4C6 (ran-binding protein 1 homolog a-like OS=Cucurbita maxima OX=3661 GN=LOC111469534 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 9.1e-103
Identity = 205/217 (94.47%), Postives = 210/217 (96.77%), Query Frame = 0


Query: 1   MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS DTERREEEEAPA EDEDTGAQVAPIVKLEEV VTTGEENEDAILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSM+VQEHVGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKAEDKAEDTPVKSKEEDKPEGEEGKSDAEK 218
           DEKKAE KAEDKAE TPVKS+E+DKPEGE  KSDAEK
Sbjct: 181 DEKKAE-KAEDKAEFTPVKSEEKDKPEGEAAKSDAEK 216

[Close]

BLAST of Lsi02G012670 vs. ExPASy TrEMBL
Match: A0A6J1D9U4 (ran-binding protein 1 homolog b-like OS=Momordica charantia OX=3673 GN=LOC111018963 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 2.0e-102
Identity = 201/217 (92.63%), Postives = 208/217 (95.85%), Query Frame = 0


Query: 1   MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MASTDTERREEEEAP GEDEDTGAQVAPIVKLE V VTTGEE+EDAILDLKSKLYRFDKD
Sbjct: 1   MASTDTERREEEEAPVGEDEDTGAQVAPIVKLEAVAVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKE+GKVRLVMRQSKTLKICANHLVL SM+VQEH GNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKESGKVRLVMRQSKTLKICANHLVLSSMSVQEHAGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQ KKEENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQMKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKAEDKAEDTPVKSKEEDKPEGEEGKSDAEK 218
           +EKKAEDK+EDK+EDTP KSKEED PEGE GKSDAEK
Sbjct: 181 EEKKAEDKSEDKSEDTPAKSKEEDTPEGEPGKSDAEK 217

[Close]

BLAST of Lsi02G012670 vs. NCBI nr
Match: XP_008457357.1 (PREDICTED: ran-binding protein 1 homolog a [Cucumis melo] >XP_011658664.2 ran-binding protein 1 homolog a [Cucumis sativus] >KAA0060033.1 ran-binding protein 1-like protein a-like [Cucumis melo var. makuwa] >KGN65824.1 hypothetical protein Csa_023197 [Cucumis sativus] >TYJ97290.1 ran-binding protein 1-like protein a-like [Cucumis melo var. makuwa])

HSP 1 Score: 393.7 bits (1010), Expect = 1.1e-105
Identity = 208/217 (95.85%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS+DTERREEEEAPA EDEDTGAQVAPIVKLE V VTTGEE+EDAILDLKSKLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETG+VRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKK ENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKAEDKAEDTPVKSKEEDKPEGEEGKSDAEK 218
           DEKKAEDK+EDKAEDTPVKSKEEDKPEGE GKSDAEK
Sbjct: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEK 217

[Close]

BLAST of Lsi02G012670 vs. NCBI nr
Match: XP_023519267.1 (ran-binding protein 1 homolog a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384.8 bits (987), Expect = 4.9e-103
Identity = 205/217 (94.47%), Postives = 211/217 (97.24%), Query Frame = 0


Query: 1   MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS DTERREEEEAPA EDEDTGAQVAPIVKLEEV VTTGEENEDAILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSM+VQEHVGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKAEDKAEDTPVKSKEEDKPEGEEGKSDAEK 218
           DE KAEDK+EDKAEDTPVKS+E+DKPEGE  KSDAEK
Sbjct: 181 DE-KAEDKSEDKAEDTPVKSEEKDKPEGEAEKSDAEK 216

[Close]

BLAST of Lsi02G012670 vs. NCBI nr
Match: KAG6583353.1 (Ran-binding protein 1-like c, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019122.1 Ran-binding protein 1-like c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 383.3 bits (983), Expect = 1.4e-102
Identity = 205/217 (94.47%), Postives = 210/217 (96.77%), Query Frame = 0


Query: 1   MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS DTERREEEEAPA EDEDTGAQVAPIVKLEEV VTTGEENEDAILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSM+VQEHVGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKAEDKAEDTPVKSKEEDKPEGEEGKSDAEK 218
           DEKKAE KAEDKAED PVKS+E+DKPEGE  KSDAEK
Sbjct: 181 DEKKAE-KAEDKAEDPPVKSEEKDKPEGEAEKSDAEK 216

[Close]

BLAST of Lsi02G012670 vs. NCBI nr
Match: XP_022970593.1 (ran-binding protein 1 homolog a-like [Cucurbita maxima])

HSP 1 Score: 382.9 bits (982), Expect = 1.9e-102
Identity = 205/217 (94.47%), Postives = 210/217 (96.77%), Query Frame = 0


Query: 1   MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS DTERREEEEAPA EDEDTGAQVAPIVKLEEV VTTGEENEDAILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSM+VQEHVGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKAEDKAEDTPVKSKEEDKPEGEEGKSDAEK 218
           DEKKAE KAEDKAE TPVKS+E+DKPEGE  KSDAEK
Sbjct: 181 DEKKAE-KAEDKAEFTPVKSEEKDKPEGEAAKSDAEK 216

[Close]

BLAST of Lsi02G012670 vs. NCBI nr
Match: XP_038894876.1 (ran-binding protein 1 homolog a [Benincasa hispida])

HSP 1 Score: 382.9 bits (982), Expect = 1.9e-102
Identity = 207/217 (95.39%), Postives = 209/217 (96.31%), Query Frame = 0


Query: 1   MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD
Sbjct: 1   MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKAEDKAEDTPVKSKEEDKPEGEEGKSDAEK 218
           D  K+EDKAED    TPVKSKEEDKPEGE  KSDAEK
Sbjct: 181 D--KSEDKAED---TTPVKSKEEDKPEGEAKKSDAEK 212

[Close]

BLAST of Lsi02G012670 vs. TAIR 10
Match: AT1G07140.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 291.6 bits (745), Expect = 5.3e-79
Identity = 160/212 (75.47%), Postives = 179/212 (84.43%), Query Frame = 0


Query: 7   ERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKDGNQWKE 66
           E R+EEEA A EDEDTGAQVAPIV+LEEV VTTGEE+EDA+LDLKSKLYRFDKD NQWKE
Sbjct: 9   EHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDKDANQWKE 68

Query: 67  RGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWHATDFAD 126
           RGAGTVKFLKHK TGK+RLVMRQSKTLKICANH V   M+VQEHVGNEKSCVWHA DFAD
Sbjct: 69  RGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVWHARDFAD 128

Query: 127 GELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVEDEKKAE 186
           GELKDELFCIRF SI+NCKTFM+ F+EVAES+++KEE+KDA+  AGLLEKL+VE E K E
Sbjct: 129 GELKDELFCIRFASIENCKTFMQKFKEVAESEEEKEESKDAADTAGLLEKLTVE-ETKTE 188

Query: 187 DKAEDKAEDT-PVKSKEEDKPEGEEGKSDAEK 218
           +K E KA +T   + K E+K E E  KS   K
Sbjct: 189 EKTEAKAVETAKTEVKAEEKKESEAEKSGEAK 219

[Close]

BLAST of Lsi02G012670 vs. TAIR 10
Match: AT2G30060.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 279.6 bits (714), Expect = 2.1e-75
Identity = 148/205 (72.20%), Postives = 173/205 (84.39%), Query Frame = 0


Query: 5   DTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKDGNQW 64
           + E R+EEE  A EDEDTGAQVAPIV+LEEV VTTGEE+ED ILDLKSKLYRFDKDG+QW
Sbjct: 9   ERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQW 68

Query: 65  KERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWHATDF 124
           KERGAGTVKFLKH+ +GK+RLVMRQSKTLKICANHLV   M+VQEH GN+KSCVWHA DF
Sbjct: 69  KERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDF 128

Query: 125 ADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVEDEKK 184
           +DGELKDELFCIRF S++NCK FM+ F+EVAES+++KEE+KDAS  AGLLEKL+VE EK+
Sbjct: 129 SDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKLTVE-EKE 188

Query: 185 AEDKAEDKAEDTPVKSKEEDKPEGE 210
           +E K  +KAE+       E+K   E
Sbjct: 189 SEKKPVEKAEENKKSEAVEEKKTEE 212

[Close]

BLAST of Lsi02G012670 vs. TAIR 10
Match: AT5G58590.1 (RAN binding protein 1 )

HSP 1 Score: 277.7 bits (709), Expect = 7.9e-75
Identity = 153/218 (70.18%), Postives = 177/218 (81.19%), Query Frame = 0


Query: 1   MASTDTER-REEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDK 60
           MAST+ ER   E+E    EDEDTGAQVAPIV+LEEV VTTGEE+EDA+LDLKSK+YRFDK
Sbjct: 1   MASTEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDK 60

Query: 61  DGNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVW 120
           +GNQWKERGAGTVK LKHKETGKVRLVMRQSKTLKICANHL+   M+VQEH GNEKSC+W
Sbjct: 61  EGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLW 120

Query: 121 HATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSV 180
           HATDF+DGELKDELFCIRF SI+NCKTFME F E+AESQ+  +E+     AAGL+E LSV
Sbjct: 121 HATDFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSV 180

Query: 181 EDEKKAEDKAEDKAEDTPVKSKEEDKPE--GEEGKSDA 216
           E E  +E+KA++  E  P K  +E K E   EE K++A
Sbjct: 181 E-ENISEEKAKEAEEKEPAKEDKETKKEKVEEEKKTEA 217

[Close]

BLAST of Lsi02G012670 vs. TAIR 10
Match: AT3G15970.1 (NUP50 (Nucleoporin 50 kDa) protein )

HSP 1 Score: 49.7 bits (117), Expect = 3.5e-06
Identity = 50/158 (31.65%), Postives = 74/158 (46.84%), Query Frame = 0


Query: 33  EEVTVTTGEENEDAILDLKSKLYRFDKDGNQWKERGAGTVKF-LKHKETGKVRLVMRQSK 92
           ++V+V TGEENE A     S ++ + + G  WKERG G +K  +   E  K RLVMR   
Sbjct: 320 QDVSVETGEENEKAAFTADSVMFEYLEGG--WKERGKGELKVNISTTENRKARLVMRSKG 379

Query: 93  TLKICANHLVLPSMTV--QEHVGNEKSCVWHATDFADGELKDELFCIRFPSIDNCKTFME 152
             ++  N  + P M +   +  G   +CV   +D  DG        ++F       T +E
Sbjct: 380 NYRLTLNASLYPEMKLAKMDKKGITFACVNSVSDAKDGL---STLALKFKD----PTVVE 439

Query: 153 TFQEVAESQKKKEENKDASAAAGLLEKLSVEDEKKAED 188
            F+ V E  K  + +  A AAA L    + E+   AED
Sbjct: 440 EFRAVIEEHKDSKPSV-AEAAAPL---KTPENSPSAED 464

The following BLAST results are available for this feature:

BLAST of Lsi02G012670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LMK7	7.5e-78	75.47	Ran-binding protein 1 homolog a OS=Arabidopsis thaliana OX=3702 GN=RANBP1A PE=1 ...	[more]
Q8RWG8	2.9e-74	72.20	Ran-binding protein 1 homolog b OS=Arabidopsis thaliana OX=3702 GN=RANBP1B PE=1 ...	[more]
P92985	1.1e-73	70.18	Ran-binding protein 1 homolog c OS=Arabidopsis thaliana OX=3702 GN=RANBP1C PE=2 ...	[more]
Q09717	3.1e-31	45.00	Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces pombe (strain 97...	[more]
P41920	1.2e-30	45.28	Ran-specific GTPase-activating protein 1 OS=Saccharomyces cerevisiae (strain ATC...	[more]

BLAST of Lsi02G012670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UVN5	5.1e-106	95.85	Ran-binding protein 1-like protein a-like OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A0A0LXN6	5.1e-106	95.85	RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G532320 PE=4...	[more]
A0A1S3C5A9	5.1e-106	95.85	ran-binding protein 1 homolog a OS=Cucumis melo OX=3656 GN=LOC103497065 PE=4 SV=...	[more]
A0A6J1I4C6	9.1e-103	94.47	ran-binding protein 1 homolog a-like OS=Cucurbita maxima OX=3661 GN=LOC111469534...	[more]
A0A6J1D9U4	2.0e-102	92.63	ran-binding protein 1 homolog b-like OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of Lsi02G012670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457357.1	1.1e-105	95.85	PREDICTED: ran-binding protein 1 homolog a [Cucumis melo] >XP_011658664.2 ran-bi...	[more]
XP_023519267.1	4.9e-103	94.47	ran-binding protein 1 homolog a-like [Cucurbita pepo subsp. pepo]	[more]
KAG6583353.1	1.4e-102	94.47	Ran-binding protein 1-like c, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022970593.1	1.9e-102	94.47	ran-binding protein 1 homolog a-like [Cucurbita maxima]	[more]
XP_038894876.1	1.9e-102	95.39	ran-binding protein 1 homolog a [Benincasa hispida]	[more]

BLAST of Lsi02G012670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07140.1	5.3e-79	75.47	Pleckstrin homology (PH) domain superfamily protein	[more]
AT2G30060.1	2.1e-75	72.20	Pleckstrin homology (PH) domain superfamily protein	[more]
AT5G58590.1	7.9e-75	70.18	RAN binding protein 1	[more]
AT3G15970.1	3.5e-06	31.65	NUP50 (Nucleoporin 50 kDa) protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000156	Ran binding domain	SMART	SM00160	ranbd_3	coord: 26..154 e-value: 1.7E-41 score: 153.9
IPR000156	Ran binding domain	PFAM	PF00638	Ran_BP1	coord: 37..154 e-value: 1.6E-39 score: 134.9
IPR000156	Ran binding domain	PROSITE	PS50196	RANBD1	coord: 25..160 score: 34.429565
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 9..173 e-value: 6.0E-54 score: 183.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..218
None	No IPR available	PANTHER	PTHR23138	RAN BINDING PROTEIN	coord: 4..217
None	No IPR available	PANTHER	PTHR23138:SF156	RAN-BINDING PROTEIN 1 HOMOLOG C-LIKE	coord: 4..217
None	No IPR available	CDD	cd13179	RanBD_RanBP1	coord: 23..156 e-value: 2.16657E-67 score: 201.643
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 24..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G012670.1	Lsi02G012670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046907	intracellular transport
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0005096	GTPase activator activity