Lsi02G012600 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi02G012600
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRING-H2 finger protein ATL63-like
Locationchr02: 16747161 .. 16747904 (-)
RNA-Seq ExpressionLsi02G012600
SyntenyLsi02G012600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTACAATTCCACTTCACTCATTGATTTCGCTCAGAGCATTTTCTCCTACAACAGCAACATCATGCTCGCCGCTCTCATTTCTCTTCTCTTAGTCGTCCTCTTCGTCCTTCTCCTCCACGCCTACGCCAATTGCTTCTTCCCTCACCCTCGCCACCACCGCCGCCGCCGCACCTCCGTCACTGTCTCCTATTTCCTCGCTCCGCCTCGTCTCTCCCGTTTCGATTCCGTTCCGTTTGATTTAGGTTTCGCTCCTCCGTCCAAAGGCCTCGATCCATCTGTAATCTCTGCGATTCCTCTGTTCGTTTACGAATCCGAGGAGAAGAAGTGCGCGGCGGCTATGGAGTGCGTGATTTGCCTCAGCGAATTTGAAGAACGAGAGCTTGGACGACGGTTGCCGAAATGTAGCCATGGATTTCATCTGGAATGTATTGATATGTGGCTGAATTCTCACGCGAGTTGTCCTGTTTGTAGAGAGCCAGTGATTGCCGAGACTACGGATTGTTCCGATACGGCGGAATCCGGCGAGAGAGAAATCGGAGGGGAGATTGTGATGGAGGAAGGGAACAATTGTGAGATTGAGAGGAATGAGGGGCAAAACGGTCAGTTTAATTCTGATTCTTCTTCGATTGATCCGCCATTGATGTCGCTTGGAGCTTCTTTGATGAGAATGTTGAGCAGAAACAGATCAGACGGAAGGATTTTCCCCTCCTCCAATGGCAATGACGAATTGAATGTTTGA

mRNA sequence

ATGGCCTACAATTCCACTTCACTCATTGATTTCGCTCAGAGCATTTTCTCCTACAACAGCAACATCATGCTCGCCGCTCTCATTTCTCTTCTCTTAGTCGTCCTCTTCGTCCTTCTCCTCCACGCCTACGCCAATTGCTTCTTCCCTCACCCTCGCCACCACCGCCGCCGCCGCACCTCCGTCACTGTCTCCTATTTCCTCGCTCCGCCTCGTCTCTCCCGTTTCGATTCCGTTCCGTTTGATTTAGGTTTCGCTCCTCCGTCCAAAGGCCTCGATCCATCTGTAATCTCTGCGATTCCTCTGTTCGTTTACGAATCCGAGGAGAAGAAGTGCGCGGCGGCTATGGAGTGCGTGATTTGCCTCAGCGAATTTGAAGAACGAGAGCTTGGACGACGGTTGCCGAAATGTAGCCATGGATTTCATCTGGAATGTATTGATATGTGGCTGAATTCTCACGCGAGTTGTCCTGTTTGTAGAGAGCCAGTGATTGCCGAGACTACGGATTGTTCCGATACGGCGGAATCCGGCGAGAGAGAAATCGGAGGGGAGATTGTGATGGAGGAAGGGAACAATTGTGAGATTGAGAGGAATGAGGGGCAAAACGGTCAGTTTAATTCTGATTCTTCTTCGATTGATCCGCCATTGATGTCGCTTGGAGCTTCTTTGATGAGAATGTTGAGCAGAAACAGATCAGACGGAAGGATTTTCCCCTCCTCCAATGGCAATGACGAATTGAATGTTTGA

Coding sequence (CDS)

ATGGCCTACAATTCCACTTCACTCATTGATTTCGCTCAGAGCATTTTCTCCTACAACAGCAACATCATGCTCGCCGCTCTCATTTCTCTTCTCTTAGTCGTCCTCTTCGTCCTTCTCCTCCACGCCTACGCCAATTGCTTCTTCCCTCACCCTCGCCACCACCGCCGCCGCCGCACCTCCGTCACTGTCTCCTATTTCCTCGCTCCGCCTCGTCTCTCCCGTTTCGATTCCGTTCCGTTTGATTTAGGTTTCGCTCCTCCGTCCAAAGGCCTCGATCCATCTGTAATCTCTGCGATTCCTCTGTTCGTTTACGAATCCGAGGAGAAGAAGTGCGCGGCGGCTATGGAGTGCGTGATTTGCCTCAGCGAATTTGAAGAACGAGAGCTTGGACGACGGTTGCCGAAATGTAGCCATGGATTTCATCTGGAATGTATTGATATGTGGCTGAATTCTCACGCGAGTTGTCCTGTTTGTAGAGAGCCAGTGATTGCCGAGACTACGGATTGTTCCGATACGGCGGAATCCGGCGAGAGAGAAATCGGAGGGGAGATTGTGATGGAGGAAGGGAACAATTGTGAGATTGAGAGGAATGAGGGGCAAAACGGTCAGTTTAATTCTGATTCTTCTTCGATTGATCCGCCATTGATGTCGCTTGGAGCTTCTTTGATGAGAATGTTGAGCAGAAACAGATCAGACGGAAGGATTTTCCCCTCCTCCAATGGCAATGACGAATTGAATGTTTGA

Protein sequence

MAYNSTSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRRRTSVTVSYFLAPPRLSRFDSVPFDLGFAPPSKGLDPSVISAIPLFVYESEEKKCAAAMECVICLSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCREPVIAETTDCSDTAESGEREIGGEIVMEEGNNCEIERNEGQNGQFNSDSSSIDPPLMSLGASLMRMLSRNRSDGRIFPSSNGNDELNV
Homology
BLAST of Lsi02G012600 vs. ExPASy Swiss-Prot
Match: Q9LUZ9 (RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.0e-35
Identity = 90/183 (49.18%), Postives = 114/183 (62.30%), Query Frame = 0

Query: 6   TSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRH--------HRR- 65
           +SL  F + + SYNSN++LAAL+ LLLVVLFVLLLH YA  FF  P H        HRR 
Sbjct: 13  SSLSSFLKILSSYNSNVLLAALVFLLLVVLFVLLLHFYAR-FFWSPSHQDFSAAARHRRR 72

Query: 66  ----RRTSVTVSYFLAPPRLSRFDSVPFDLGFAPPS-------KGLDPSVISAIPLFVYE 125
               RR +VT +  +    L  FD      G + P+       KGLD SVIS+IPLFVYE
Sbjct: 73  RRRNRRRTVTTTRIIPSLPLGGFDD-----GVSSPAATATRDDKGLDSSVISSIPLFVYE 132

Query: 126 SEEKKCAAAMECVICLSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCREPVIAE 169
             E++     ECVICL  +E  + GR+L  C HGFH+ECIDMWL+SH++CP+CR PV+A 
Sbjct: 133 ENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAA 189

BLAST of Lsi02G012600 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 119.4 bits (298), Expect = 5.8e-26
Identity = 65/169 (38.46%), Postives = 96/169 (56.80%), Query Frame = 0

Query: 16  FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRRRTS----VTVSYFLAPPR 75
           ++ +  IML+A++ L  VV+ ++ LH YA  +    R    RR S     T+ +F A P 
Sbjct: 24  YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPS 83

Query: 76  LSRFDSVPFDLGFAPPSKGLDPSVISAIPLFVYESEEKKCAAAMECVICLSEFEERELGR 135
            +    V         S+GLDP+VI ++P+F +  E  K    +EC +CLSEFEE E GR
Sbjct: 84  TAATSVV--------ASRGLDPNVIKSLPVFTFSDETHK--DPIECAVCLSEFEESETGR 143

Query: 136 RLPKCSHGFHLECIDMWLNSHASCPVCREPVIAETTDCSDTAESGEREI 181
            LP C H FH++CIDMW +SH++CP+CR  ++        TA + ERE+
Sbjct: 144 VLPNCQHTFHVDCIDMWFHSHSTCPLCRS-LVESLAGIESTAAAREREV 181

BLAST of Lsi02G012600 vs. ExPASy Swiss-Prot
Match: O22255 (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 8.6e-22
Identity = 63/160 (39.38%), Postives = 87/160 (54.37%), Query Frame = 0

Query: 9   IDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRRRTSVTVSYFLA 68
           +    S ++ N  IML+++I L + V+ +L  H+YA   F   RH+RR R          
Sbjct: 15  VSHTSSGYALNGKIMLSSVIVLFVAVIMILCFHSYARWLF--RRHNRRIR---------- 74

Query: 69  PPRLSRFDSVPFDLGFAPPSKGLDPSVISAIPLFVYES------EEKKCAAAMECVICLS 128
                R  S    L  +P  + LD +V+  IP+FVY S      EEK+     EC +CLS
Sbjct: 75  ----RRIRSHLRTLSASPRDQALDQAVLDKIPIFVYSSKNPPPPEEKE-----ECSVCLS 134

Query: 129 EFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCREPV 163
           EFEE + GR LPKC H FH++CID W  S ++CP+CR PV
Sbjct: 135 EFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPV 153

BLAST of Lsi02G012600 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.2e-20
Identity = 78/245 (31.84%), Postives = 118/245 (48.16%), Query Frame = 0

Query: 9   IDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRRRTSVTVSYFLA 68
           ++   S +S N  IMLA++I L + V+ +L  H+YA   F       RRR S  +   LA
Sbjct: 15  MNHGSSRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRRIRRRISAHLR-SLA 74

Query: 69  PPRLSRFDSVPFDLGFAPPSKGLDPSVISAIPLFVYESEEKKCAAAMECVICLSEFEERE 128
             R    D        +P    LDP+V+  IP+FVY  +  + +   EC +CLSEFEE +
Sbjct: 75  AAR----DPTQSSSSLSP----LDPTVLEKIPIFVYSVKTHE-SPLEECSVCLSEFEEDD 134

Query: 129 LGRRLPKCSHGFHLECIDMWLNSHASCPVCREPV-----IAETTDCSDTAES----GERE 188
            GR LPKC H FH++CID W  S +SCP+CR PV     + E    +    S     + E
Sbjct: 135 EGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDTE 194

Query: 189 IGGEIVMEEGNNCEIERNEGQNGQFNSDSSSIDP-PLMSLGASLMRMLSRNRSDGRIFPS 244
            G     +E  +     + G   +F  ++   +P  L+ +   + R    + SD    P+
Sbjct: 195 AGSSSSSDESESSTPSSSSGSPVRFPMEACEREPIDLVGIIVEIPREFQDSNSD---LPA 246

BLAST of Lsi02G012600 vs. ExPASy Swiss-Prot
Match: Q9SLC3 (E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.8e-20
Identity = 76/232 (32.76%), Postives = 115/232 (49.57%), Query Frame = 0

Query: 14  SIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRRRTSVTVSYFLAPPRLS 73
           S +  NS IMLAA+ SL  V+L V  LH YA          RRRR +     F   P + 
Sbjct: 23  STYDLNSKIMLAAVASLSGVILIVFALHLYARFVL------RRRREA-----FRGLPVIF 82

Query: 74  RFDSVPFDLGFAPPSKGLDPSVISAIPLFVYESEEKKCAAAMECVICLSEFEERELGRRL 133
           R    PF++    P +GL+P+VI+++P F   + +   A+A EC +CLS  +E++  R L
Sbjct: 83  RH---PFEM----PKRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKAREL 142

Query: 134 PKCSHGFHLECIDMWLNSHASCPVCREPVIAETTDCSDTAESGEREIGGEIVMEEGNNCE 193
           P C H FH++C+D WL + ++CPVCR  V             G      ++++E   N  
Sbjct: 143 PNCKHIFHVDCVDTWLTTCSTCPVCRTEV-EPRPRLEPEPREGPVGTAPQLLVETRLNLT 202

Query: 194 IERNEGQNGQFNSDSSSIDPPLMSLGASLMRMLSRNRSDGRIFPSSNGNDEL 246
           +E         +SD+ ++  P   L  S  ++L+R RS  RI  S    D +
Sbjct: 203 VEAASSS----SSDNKTVVSPASRLN-SFRKILTRERSSNRINHSCPDQDRV 230

BLAST of Lsi02G012600 vs. ExPASy TrEMBL
Match: A0A6J1HZJ3 (RING-H2 finger protein ATL63-like OS=Cucurbita maxima OX=3661 GN=LOC111469533 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.6e-106
Identity = 215/264 (81.44%), Postives = 222/264 (84.09%), Query Frame = 0

Query: 1   MAYNSTSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRRRTS 60
           MA+NSTSLI FAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFP PRH   RRTS
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRH---RRTS 60

Query: 61  VTVSYFLAPPRLSRFDSVPFDLGFAPPSKGLDPSVISAIPLFVYESEEKKCAAAMECVIC 120
           VTVSY L PPRLSRFDSVPFD G A PSKGLDPSVISAIPLFVYESEEKKC A MECVIC
Sbjct: 61  VTVSYVLGPPRLSRFDSVPFDSG-AAPSKGLDPSVISAIPLFVYESEEKKCTAVMECVIC 120

Query: 121 LSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCREPVIAETTDCSDTAE----SG 180
           LSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCR PV+ +  DCSD  E    SG
Sbjct: 121 LSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSG 180

Query: 181 EREIGGEIVMEEGNNCEIERNEGQNGQFNSD-------------SSSIDPPLMSLGASLM 240
           EREIGGEIV EE +NCEI+RNEGQNGQF SD             SSS D PLMSLGASL 
Sbjct: 181 EREIGGEIVTEERSNCEIQRNEGQNGQFYSDSSSSSSSSSLSSSSSSTDQPLMSLGASLK 240

Query: 241 RMLSRNRSDGRIFPSSNGNDELNV 248
           RMLSRNRSDGRIFPSS+G DEL+V
Sbjct: 241 RMLSRNRSDGRIFPSSDG-DELDV 259

BLAST of Lsi02G012600 vs. ExPASy TrEMBL
Match: A0A6J1HPE0 (RING-H2 finger protein ATL63-like OS=Cucurbita moschata OX=3662 GN=LOC111464835 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 2.9e-105
Identity = 215/273 (78.75%), Postives = 222/273 (81.32%), Query Frame = 0

Query: 1   MAYNSTSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRRRTS 60
           MA+NSTSLI FAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFP PRH   RRTS
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRH---RRTS 60

Query: 61  VTVSYFLAPPRLSRFDSVPFDLGFAPPSKGLDPSVISAIPLFVYESEEKKCAAAMECVIC 120
           VTVSY L PPRLSRFDSVPFD G A PSKGLDPSVISAIPLFVYESEEKKCAA MECVIC
Sbjct: 61  VTVSYVLGPPRLSRFDSVPFDSG-AAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVIC 120

Query: 121 LSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCREPVIAETTDCSDTAE----SG 180
           LSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCR PV+ +  DCSD  E    SG
Sbjct: 121 LSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSG 180

Query: 181 EREIGGEIVMEEGNNCEIERNEGQNGQF----------------------NSDSSSIDPP 240
           EREIGGEIV EE  NCEI+RNEGQNGQF                      +S SSS D P
Sbjct: 181 EREIGGEIVTEERRNCEIQRNEGQNGQFHSSSSSSSSSSSSSSSSSSSSLSSSSSSTDQP 240

Query: 241 LMSLGASLMRMLSRNRSDGRIFPSSNGNDELNV 248
           LMSLGASL RMLSRNRSDGRIFPSS+G DEL+V
Sbjct: 241 LMSLGASLKRMLSRNRSDGRIFPSSDG-DELDV 268

BLAST of Lsi02G012600 vs. ExPASy TrEMBL
Match: A0A6J1KH83 (RING-H2 finger protein ATL63-like OS=Cucurbita maxima OX=3661 GN=LOC111493195 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 5.7e-101
Identity = 200/251 (79.68%), Postives = 215/251 (85.66%), Query Frame = 0

Query: 1   MAYNSTSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRRRTS 60
           MA+NSTSL DF QSIFSYNSN++LAALISLLLVVLFVLLLHAYANCFFP PRH   +R+S
Sbjct: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60

Query: 61  VTVSYFLAPPRLSRFDSVPFDLGFAPPSKGLDPSVISAIPLFVYESEEKKCAAAMECVIC 120
           VTVSY L PPRLSRFDS+PFDLGFA  SKGLD SVIS IPLFVYESEEKKCA  MECVIC
Sbjct: 61  VTVSYVLGPPRLSRFDSIPFDLGFA-QSKGLDSSVISTIPLFVYESEEKKCATVMECVIC 120

Query: 121 LSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCREPVIAETTDCSDTAESGEREI 180
           LSEFEERE+GRRLP C+HGFHL+CIDMWLNSHA+CPVCR PV+AE  + S    SGEREI
Sbjct: 121 LSEFEEREIGRRLPICNHGFHLDCIDMWLNSHANCPVCRAPVVAEAVESSRL--SGEREI 180

Query: 181 GGEIVMEEGNNCEIERNEGQNGQFNSDS----SSIDPPLMSLGASLMRMLSRNRSDGRIF 240
           G EIV EE  NCEI+RNE QNGQF+S S    SS DPPLMSLGASL RMLSRNRS+GRIF
Sbjct: 181 GEEIVTEERTNCEIQRNEEQNGQFHSSSSSSNSSTDPPLMSLGASLKRMLSRNRSNGRIF 240

Query: 241 PSSNGNDELNV 248
           PSSNG DELNV
Sbjct: 241 PSSNG-DELNV 247

BLAST of Lsi02G012600 vs. ExPASy TrEMBL
Match: A0A6J1GBH1 (RING-H2 finger protein ATL63-like OS=Cucurbita moschata OX=3662 GN=LOC111452651 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 7.4e-101
Identity = 200/251 (79.68%), Postives = 215/251 (85.66%), Query Frame = 0

Query: 1   MAYNSTSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRRRTS 60
           MA+NSTSL DF QSIFSYNSN++LAALISLLLVVLFVLLLHAYANCFFP PRH   +R+S
Sbjct: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60

Query: 61  VTVSYFLAPPRLSRFDSVPFDLGFAPPSKGLDPSVISAIPLFVYESEEKKCAAAMECVIC 120
           VTVSY L PPRLSRF+S+PFDLGFA  SKGLD SVISAIPLFVYESEEKKCA  MECVIC
Sbjct: 61  VTVSYVLGPPRLSRFESIPFDLGFA-QSKGLDSSVISAIPLFVYESEEKKCATVMECVIC 120

Query: 121 LSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCREPVIAETTDCSDTAESGEREI 180
           LSEFEERE+GRRLP C+HGFHLECIDMWLNSHA+CPVCR PV+AE  +      SGEREI
Sbjct: 121 LSEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRL--SGEREI 180

Query: 181 GGEIVMEEGNNCEIERNEGQNGQF----NSDSSSIDPPLMSLGASLMRMLSRNRSDGRIF 240
           G EIV EE  NCEI+RNE QNGQF    +S SSS DPPLMSLGASL RMLSRNRS+GRIF
Sbjct: 181 GEEIVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIF 240

Query: 241 PSSNGNDELNV 248
           PSSNG DELNV
Sbjct: 241 PSSNG-DELNV 247

BLAST of Lsi02G012600 vs. ExPASy TrEMBL
Match: A0A5A7UXS2 (RING-H2 finger protein ATL63 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold340G00740 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.6e-100
Identity = 208/250 (83.20%), Postives = 216/250 (86.40%), Query Frame = 0

Query: 4   NSTSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRRRTSVTV 63
           NSTSL  FAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRH  RRRTSVTV
Sbjct: 5   NSTSLTQFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRH--RRRTSVTV 64

Query: 64  SYFLAPPRLSRFDS-VPFDLGFAPPSKGLDPSVISAIPLFVYESEEKKCAAAMECVICLS 123
           SY LAPPRLSRFDS VPFDLG A PSKGLDPSVISAIPLFVYESEEKKCAAAMECVICLS
Sbjct: 65  SYVLAPPRLSRFDSVVPFDLGSA-PSKGLDPSVISAIPLFVYESEEKKCAAAMECVICLS 124

Query: 124 EFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCREPVIAETTDCSDTAESGEREIGG 183
           EFEERELGRRLPKC HGFHLECIDMWLNSHA+CPVCREPVI E  DCSD AESGE EIG 
Sbjct: 125 EFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAAESGEGEIGR 184

Query: 184 EIVMEEGNNCEIERNEGQNGQFNSD---SSSIDPP--LMSLGASLMRMLSRNRSDGRIFP 243
           E V           NEGQ+GQFNSD   SSSIDPP  + S+GASL+R+LSRNRSDGRIFP
Sbjct: 185 ETV-----------NEGQSGQFNSDSSSSSSIDPPPLMSSIGASLIRILSRNRSDGRIFP 239

Query: 244 SSNGNDELNV 248
           SSNG +EL+V
Sbjct: 245 SSNG-EELDV 239

BLAST of Lsi02G012600 vs. NCBI nr
Match: XP_038895413.1 (RING-H2 finger protein ATL63 [Benincasa hispida])

HSP 1 Score: 421.8 bits (1083), Expect = 4.1e-114
Identity = 225/254 (88.58%), Postives = 232/254 (91.34%), Query Frame = 0

Query: 1   MAYNSTSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRRRTS 60
           M  NSTSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPR+  R RTS
Sbjct: 1   MGSNSTSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRYRHRHRTS 60

Query: 61  VTVSYFLAPPRLSRFD-SVPFDLGFAPPSKGLDPSVISAIPLFVYESEEKKCAAAMECVI 120
           +TVSY LAPPRLSRFD SVPFDL  + PSKGLDPSVISAIPLFVYESEEKKCAAAMECVI
Sbjct: 61  LTVSYILAPPRLSRFDSSVPFDL-VSAPSKGLDPSVISAIPLFVYESEEKKCAAAMECVI 120

Query: 121 CLSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCREPVIAETTDCSDTAESGERE 180
           CLSEFEERELGRRLPKCSHGFHLECIDMWLNSHA+CPVCREPVI E  DCSD AESGERE
Sbjct: 121 CLSEFEERELGRRLPKCSHGFHLECIDMWLNSHANCPVCREPVIGEAADCSDAAESGERE 180

Query: 181 IGGEI--VMEE-GNNCEIERNEGQNGQFNSD---SSSIDPPLMSLGASLMRMLSRNRSDG 240
           IGGEI  VMEE  NNCEI+RNEGQNGQFNSD   SSSIDPPLMSLGASLMRMLSRNRSDG
Sbjct: 181 IGGEIVNVMEERSNNCEIQRNEGQNGQFNSDSSSSSSIDPPLMSLGASLMRMLSRNRSDG 240

Query: 241 RIFPSSNGNDELNV 248
           RIFPSSNG +EL+V
Sbjct: 241 RIFPSSNGEEELDV 253

BLAST of Lsi02G012600 vs. NCBI nr
Match: XP_023519269.1 (RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 397.1 bits (1019), Expect = 1.1e-106
Identity = 216/268 (80.60%), Postives = 224/268 (83.58%), Query Frame = 0

Query: 1   MAYNSTSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRRRTS 60
           MA+NSTSLI FAQS+FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFP PRH   RRTS
Sbjct: 1   MAFNSTSLIGFAQSVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRH---RRTS 60

Query: 61  VTVSYFLAPPRLSRFDSVPFDLGFAPPSKGLDPSVISAIPLFVYESEEKKCAAAMECVIC 120
           VTVSY L PPRLSRFDSVPFD G A PSKGLDPSVISAIPLFVYESEEKKCAA MECVIC
Sbjct: 61  VTVSYVLGPPRLSRFDSVPFDSG-AAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVIC 120

Query: 121 LSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCREPVIAETTDCSDTAE----SG 180
           LSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCR PV+ + TDCSD  E    SG
Sbjct: 121 LSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLSG 180

Query: 181 EREIGGEIVMEEGNNCEIERNEGQNGQFNSD-----------------SSSIDPPLMSLG 240
           EREIGGEIV EE  NCEI+RNEGQNGQF+SD                 SSS D PLMSLG
Sbjct: 181 EREIGGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSSLSSSSSSTDQPLMSLG 240

Query: 241 ASLMRMLSRNRSDGRIFPSSNGNDELNV 248
           ASL RMLSRNRSDGRIFPSS+G DEL+V
Sbjct: 241 ASLKRMLSRNRSDGRIFPSSDG-DELDV 263

BLAST of Lsi02G012600 vs. NCBI nr
Match: XP_022970592.1 (RING-H2 finger protein ATL63-like [Cucurbita maxima])

HSP 1 Score: 394.8 bits (1013), Expect = 5.4e-106
Identity = 215/264 (81.44%), Postives = 222/264 (84.09%), Query Frame = 0

Query: 1   MAYNSTSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRRRTS 60
           MA+NSTSLI FAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFP PRH   RRTS
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRH---RRTS 60

Query: 61  VTVSYFLAPPRLSRFDSVPFDLGFAPPSKGLDPSVISAIPLFVYESEEKKCAAAMECVIC 120
           VTVSY L PPRLSRFDSVPFD G A PSKGLDPSVISAIPLFVYESEEKKC A MECVIC
Sbjct: 61  VTVSYVLGPPRLSRFDSVPFDSG-AAPSKGLDPSVISAIPLFVYESEEKKCTAVMECVIC 120

Query: 121 LSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCREPVIAETTDCSDTAE----SG 180
           LSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCR PV+ +  DCSD  E    SG
Sbjct: 121 LSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSG 180

Query: 181 EREIGGEIVMEEGNNCEIERNEGQNGQFNSD-------------SSSIDPPLMSLGASLM 240
           EREIGGEIV EE +NCEI+RNEGQNGQF SD             SSS D PLMSLGASL 
Sbjct: 181 EREIGGEIVTEERSNCEIQRNEGQNGQFYSDSSSSSSSSSLSSSSSSTDQPLMSLGASLK 240

Query: 241 RMLSRNRSDGRIFPSSNGNDELNV 248
           RMLSRNRSDGRIFPSS+G DEL+V
Sbjct: 241 RMLSRNRSDGRIFPSSDG-DELDV 259

BLAST of Lsi02G012600 vs. NCBI nr
Match: KAG6583350.1 (RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 392.1 bits (1006), Expect = 3.5e-105
Identity = 216/277 (77.98%), Postives = 223/277 (80.51%), Query Frame = 0

Query: 1   MAYNSTSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRRRTS 60
           MA+NSTSLI FAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFP PRH   RRTS
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRH---RRTS 60

Query: 61  VTVSYFLAPPRLSRFDSVPFDLGFAPPSKGLDPSVISAIPLFVYESEEKKCAAAMECVIC 120
           VTVSY L PPRLSRFDSVPFD G A PSKGLDPSVISAIPLFVYESEEKKCAA MECVIC
Sbjct: 61  VTVSYVLGPPRLSRFDSVPFDSG-AAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVIC 120

Query: 121 LSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCREPVIAETTDCSDTAE----SG 180
           LSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCR PV+ +  DCSD  E    SG
Sbjct: 121 LSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESDRLSG 180

Query: 181 EREIGGEIVMEEGNNCEIERNEGQNGQFNSD--------------------------SSS 240
           EREIGGEIV EE  NCEI+RNEGQNGQF+SD                          SSS
Sbjct: 181 EREIGGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSSSSSSSSSSSLSSSSSS 240

Query: 241 IDPPLMSLGASLMRMLSRNRSDGRIFPSSNGNDELNV 248
            D PLMSLGASL RMLSRNRSDGRIFPSS+G DEL+V
Sbjct: 241 TDQPLMSLGASLKRMLSRNRSDGRIFPSSDG-DELDV 272

BLAST of Lsi02G012600 vs. NCBI nr
Match: KAG7019120.1 (RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 391.7 bits (1005), Expect = 4.6e-105
Identity = 216/278 (77.70%), Postives = 223/278 (80.22%), Query Frame = 0

Query: 1   MAYNSTSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRRRTS 60
           MA+NSTSLI FAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFP PRH   RRTS
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRH---RRTS 60

Query: 61  VTVSYFLAPPRLSRFDSVPFDLGFAPPSKGLDPSVISAIPLFVYESEEKKCAAAMECVIC 120
           VTVSY L PPRLSRFDSVPFD G A PSKGLDPSVISAIPLFVYESEEKKCAA MECVIC
Sbjct: 61  VTVSYVLGPPRLSRFDSVPFDSG-AAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVIC 120

Query: 121 LSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCREPVIAETTDCSDTAE----SG 180
           LSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCR PV+ +  DCSD  E    SG
Sbjct: 121 LSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESDRLSG 180

Query: 181 EREIGGEIVMEEGNNCEIERNEGQNGQFNSD---------------------------SS 240
           EREIGGEIV EE  NCEI+RNEGQNGQF+SD                           SS
Sbjct: 181 EREIGGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSSSSSSSSSSSSLSSSSS 240

Query: 241 SIDPPLMSLGASLMRMLSRNRSDGRIFPSSNGNDELNV 248
           S D PLMSLGASL RMLSRNRSDGRIFPSS+G DEL+V
Sbjct: 241 STDQPLMSLGASLKRMLSRNRSDGRIFPSSDG-DELDV 273

BLAST of Lsi02G012600 vs. TAIR 10
Match: AT5G58580.1 (TOXICOS EN LEVADURA 63 )

HSP 1 Score: 149.8 bits (377), Expect = 2.8e-36
Identity = 90/183 (49.18%), Postives = 114/183 (62.30%), Query Frame = 0

Query: 6   TSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRH--------HRR- 65
           +SL  F + + SYNSN++LAAL+ LLLVVLFVLLLH YA  FF  P H        HRR 
Sbjct: 13  SSLSSFLKILSSYNSNVLLAALVFLLLVVLFVLLLHFYAR-FFWSPSHQDFSAAARHRRR 72

Query: 66  ----RRTSVTVSYFLAPPRLSRFDSVPFDLGFAPPS-------KGLDPSVISAIPLFVYE 125
               RR +VT +  +    L  FD      G + P+       KGLD SVIS+IPLFVYE
Sbjct: 73  RRRNRRRTVTTTRIIPSLPLGGFDD-----GVSSPAATATRDDKGLDSSVISSIPLFVYE 132

Query: 126 SEEKKCAAAMECVICLSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCREPVIAE 169
             E++     ECVICL  +E  + GR+L  C HGFH+ECIDMWL+SH++CP+CR PV+A 
Sbjct: 133 ENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAA 189

BLAST of Lsi02G012600 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 119.4 bits (298), Expect = 4.1e-27
Identity = 65/169 (38.46%), Postives = 96/169 (56.80%), Query Frame = 0

Query: 16  FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRRRTS----VTVSYFLAPPR 75
           ++ +  IML+A++ L  VV+ ++ LH YA  +    R    RR S     T+ +F A P 
Sbjct: 24  YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPS 83

Query: 76  LSRFDSVPFDLGFAPPSKGLDPSVISAIPLFVYESEEKKCAAAMECVICLSEFEERELGR 135
            +    V         S+GLDP+VI ++P+F +  E  K    +EC +CLSEFEE E GR
Sbjct: 84  TAATSVV--------ASRGLDPNVIKSLPVFTFSDETHK--DPIECAVCLSEFEESETGR 143

Query: 136 RLPKCSHGFHLECIDMWLNSHASCPVCREPVIAETTDCSDTAESGEREI 181
            LP C H FH++CIDMW +SH++CP+CR  ++        TA + ERE+
Sbjct: 144 VLPNCQHTFHVDCIDMWFHSHSTCPLCRS-LVESLAGIESTAAAREREV 181

BLAST of Lsi02G012600 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 6.1e-23
Identity = 63/160 (39.38%), Postives = 87/160 (54.37%), Query Frame = 0

Query: 9   IDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRRRTSVTVSYFLA 68
           +    S ++ N  IML+++I L + V+ +L  H+YA   F   RH+RR R          
Sbjct: 15  VSHTSSGYALNGKIMLSSVIVLFVAVIMILCFHSYARWLF--RRHNRRIR---------- 74

Query: 69  PPRLSRFDSVPFDLGFAPPSKGLDPSVISAIPLFVYES------EEKKCAAAMECVICLS 128
                R  S    L  +P  + LD +V+  IP+FVY S      EEK+     EC +CLS
Sbjct: 75  ----RRIRSHLRTLSASPRDQALDQAVLDKIPIFVYSSKNPPPPEEKE-----ECSVCLS 134

Query: 129 EFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCREPV 163
           EFEE + GR LPKC H FH++CID W  S ++CP+CR PV
Sbjct: 135 EFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPV 153

BLAST of Lsi02G012600 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 101.7 bits (252), Expect = 8.8e-22
Identity = 78/245 (31.84%), Postives = 118/245 (48.16%), Query Frame = 0

Query: 9   IDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRRRTSVTVSYFLA 68
           ++   S +S N  IMLA++I L + V+ +L  H+YA   F       RRR S  +   LA
Sbjct: 15  MNHGSSRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRRIRRRISAHLR-SLA 74

Query: 69  PPRLSRFDSVPFDLGFAPPSKGLDPSVISAIPLFVYESEEKKCAAAMECVICLSEFEERE 128
             R    D        +P    LDP+V+  IP+FVY  +  + +   EC +CLSEFEE +
Sbjct: 75  AAR----DPTQSSSSLSP----LDPTVLEKIPIFVYSVKTHE-SPLEECSVCLSEFEEDD 134

Query: 129 LGRRLPKCSHGFHLECIDMWLNSHASCPVCREPV-----IAETTDCSDTAES----GERE 188
            GR LPKC H FH++CID W  S +SCP+CR PV     + E    +    S     + E
Sbjct: 135 EGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDTE 194

Query: 189 IGGEIVMEEGNNCEIERNEGQNGQFNSDSSSIDP-PLMSLGASLMRMLSRNRSDGRIFPS 244
            G     +E  +     + G   +F  ++   +P  L+ +   + R    + SD    P+
Sbjct: 195 AGSSSSSDESESSTPSSSSGSPVRFPMEACEREPIDLVGIIVEIPREFQDSNSD---LPA 246

BLAST of Lsi02G012600 vs. TAIR 10
Match: AT2G42360.1 (RING/U-box superfamily protein )

HSP 1 Score: 100.5 bits (249), Expect = 2.0e-21
Identity = 76/232 (32.76%), Postives = 115/232 (49.57%), Query Frame = 0

Query: 14  SIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRRRTSVTVSYFLAPPRLS 73
           S +  NS IMLAA+ SL  V+L V  LH YA          RRRR +     F   P + 
Sbjct: 23  STYDLNSKIMLAAVASLSGVILIVFALHLYARFVL------RRRREA-----FRGLPVIF 82

Query: 74  RFDSVPFDLGFAPPSKGLDPSVISAIPLFVYESEEKKCAAAMECVICLSEFEERELGRRL 133
           R    PF++    P +GL+P+VI+++P F   + +   A+A EC +CLS  +E++  R L
Sbjct: 83  RH---PFEM----PKRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKAREL 142

Query: 134 PKCSHGFHLECIDMWLNSHASCPVCREPVIAETTDCSDTAESGEREIGGEIVMEEGNNCE 193
           P C H FH++C+D WL + ++CPVCR  V             G      ++++E   N  
Sbjct: 143 PNCKHIFHVDCVDTWLTTCSTCPVCRTEV-EPRPRLEPEPREGPVGTAPQLLVETRLNLT 202

Query: 194 IERNEGQNGQFNSDSSSIDPPLMSLGASLMRMLSRNRSDGRIFPSSNGNDEL 246
           +E         +SD+ ++  P   L  S  ++L+R RS  RI  S    D +
Sbjct: 203 VEAASSS----SSDNKTVVSPASRLN-SFRKILTRERSSNRINHSCPDQDRV 230

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LUZ94.0e-3549.18RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1[more]
Q8L9T55.8e-2638.46RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2[more]
O222558.6e-2239.38RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1[more]
Q9LZJ61.2e-2031.84RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1[more]
Q9SLC32.8e-2032.76E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 ... [more]
Match NameE-valueIdentityDescription
A0A6J1HZJ32.6e-10681.44RING-H2 finger protein ATL63-like OS=Cucurbita maxima OX=3661 GN=LOC111469533 PE... [more]
A0A6J1HPE02.9e-10578.75RING-H2 finger protein ATL63-like OS=Cucurbita moschata OX=3662 GN=LOC111464835 ... [more]
A0A6J1KH835.7e-10179.68RING-H2 finger protein ATL63-like OS=Cucurbita maxima OX=3661 GN=LOC111493195 PE... [more]
A0A6J1GBH17.4e-10179.68RING-H2 finger protein ATL63-like OS=Cucurbita moschata OX=3662 GN=LOC111452651 ... [more]
A0A5A7UXS21.6e-10083.20RING-H2 finger protein ATL63 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
Match NameE-valueIdentityDescription
XP_038895413.14.1e-11488.58RING-H2 finger protein ATL63 [Benincasa hispida][more]
XP_023519269.11.1e-10680.60RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo][more]
XP_022970592.15.4e-10681.44RING-H2 finger protein ATL63-like [Cucurbita maxima][more]
KAG6583350.13.5e-10577.98RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7019120.14.6e-10577.70RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. argyrosperma... [more]
Match NameE-valueIdentityDescription
AT5G58580.12.8e-3649.18TOXICOS EN LEVADURA 63 [more]
AT3G16720.14.1e-2738.46TOXICOS EN LEVADURA 2 [more]
AT2G47560.16.1e-2339.38RING/U-box superfamily protein [more]
AT3G62690.18.8e-2231.84AtL5 [more]
AT2G42360.12.0e-2132.76RING/U-box superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 117..158
e-value: 1.1E-6
score: 38.3
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 116..159
e-value: 4.6E-12
score: 46.1
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 117..159
score: 12.54829
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 85..164
e-value: 9.8E-22
score: 78.4
NoneNo IPR availablePANTHERPTHR14155:SF514CHROMATIN REGULATOR PHD FAMILY-RELATEDcoord: 7..241
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 7..241
NoneNo IPR availableCDDcd16461RING-H2_EL5_likecoord: 116..159
e-value: 5.88074E-19
score: 75.4243
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 116..165

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G012600.1Lsi02G012600.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane