Lsi02G012360 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATGGGGTGCCAATACAATGACCTGAATCTACCCCTGACGTGAGGCCCAGTTTCTATTCCACGATAAACAACATGCAATGAATCTAAGATTCCCATGGGCTCCAATACGTTTACGATGTAACCCCCTGTTTTCAGCATCAGCAATTTCATCAGATTCCATTTGTAAGGAGATTCCAACTGTAGAGAAGAGATTCCCATGAAAAAAGTTGATTAATGTAGTGTAATCCATGGAGTCTTCGCCTAAACTCTGTTCCTTCCTTTACATTTCTTCTCTCATACTCCTTCTCTCCTCTTTTTCCCTTCCTCTGTCATCTGCTTCACCTTCCATATCCTCAACCTCCAATTATGGCACCCACAAAGTCTCCCTCAAACTCTATTATGAGTCCCTTTGTCCTTACAGCGCCAATTTCATCGTCAACTATCTGGTTAAGCTTTTCGATGACGATCTCATCTCCATAGTTGATCTCAGGCTCGTTCCTTATGGCAACGCAAGGGTTGGCCACAATGATTCCATCACTTGTCAGGTACTCTCTTTAATTCATTACATTTCTGCTTTGATTAATTGCAAAATGAATTGCGTGTTTCCTTTCTTCTGCTCGATTTGATTTTAGGGTTTTCGTTGTGGTTACTTTAGGGATGAGCAATTGCTAATTGTTCGGATCCTTTCACCATCATGTTCTTTGTTTACTCTTGCAGTTCCAATTTTATCATCTGGAAATCTCTATATATTTCGATAGGGGGATTTCATATTTAATTTCTTCTCTATTTCGCTTTATACTGTTTGATGTGTCTGTTAGAATCTTCTTTTCTGTTCCGTTTTAAGTTGCTGTTCACTGTTTTATACTCTTTCATGACAGATCTAAAGAGACAGTTTAATAAACTTCAGCATGACACTAATGAATTCCGTTTTAAGTTGGTGTTCATCGTTAACTGGCTAATGAACTTGTTGTATTGGATGTTGGAATTTCAGCATGGCCCTAATGAATGCCTATTGAACACTGTGGAAGCCTGTGCCATTAACGCCTGGCCTGAGCTGGTAAGACTTTCTCATGGGAGCATGACACTAGTTAGTTGCTTAGCAACTGTTCCTTCTTTATTATACATTACCGCATATAACTCCATTTTCTTTGTTTCATTTTAATTGCATCATTTGTTACCTACCTGTATGTGGTTACTTGGGTAACTACTTATTTACTGATCGTTGATATTAGTTTCTTAAATTTTCTTGGATTGGTACAAAAAGTTATCCTTATTAATATTGGTTTGCTATCGTCTATCGACTGTTCTGATGTAGTTGGGTGTACATAGTCTATATATGTATGTTTCTCTTTTTGCCATCTTGGGATTGAAATGTTGAAACTCAAGAATACCATCACATTTTTATCAACATATGTTACCTCCAACTCCATATGGAGTTATATCATTAATTACTAATGTACAGAGTGAGTGAGTTAGATTTGGGAGGATAAATTTCTTCACTTATACTGATGAGTTTTGCAGGAGGATCATTTTCCTTTCATTTACTGCATTGAGTATCTGGTGTACAAACGGAAGTACACACAGTGGGAGTCATGTTTTGAGAAGTTGGGGTTGAATCCCAAGCCCATCAATGATTGCTACAATACCGAGCTTGGGAAAAAGGTAAGTTTCTTTAAGCAACTCGGTTACGATTTTTGTGTTCGTTCGAGTTTCATCAAAATGTAATCTTGACACCTGTTCAACTAAACTTGGACGAACCCATGATGATAGATTCCTAGTTGTCAACATATCTAGCTGACCTTGGTTTTCTACTGTCTGAAGATTTCATCGATTTTGTTGACTGAGAAATAGGGGTTCCATCCATAATCAGTTCACTGTCTCTGGTTTATGGTTGAGTACACAAACATAGAGATAATGAAGGTGGAGTGTTGTTCTTTGTAATTGGAATCTTATCATTTTTCTGCAGCTTGAACTGGCATATGCAGCTGAGACCGATAATCTTCAGCCCCCTCACAAATACGTACCTTGGGTTGTTGTTGATGGGCAACCACTGTATGAGGTTTGTTTCCTTCTTTCTGTTACACGCACTCATCTTCCTCACGCACAAAGTAACTGCAAAAAGTTCTAGGCTTGGGTTATACTAACATGGAGACAGTCTATTTATTTATAGATTAATGACTCTATCTCATAACCATTTGGTTTTCAAAAAGTAAGCTTATATCTACATATAAAAAATTTTCAAAGGTCAAGTCAACTTTTAAAAGGTATTTTTAAAAAACTTGTGTTTGTTTTTAAAATCTGGCTAAGCATTCAAACCCTTCTTAAAAAAATGTGAAAATTATAGTAAAGAAATAGTGAGAACGAAACACAAATTTCAAATATAGAAAAAAAAATCGAAATTGTTAGGAAAGAACGGATCCTTACCTATTGGTTTTAACAAATTGCATACATTTGGTGCAGTGATATCAACTCTTCATCAAGTATGGTATACACTTTCATTAACTTGAAACTGATAAGGATTTTCATAATTCTTCTCTTGCTGTAGGATTATGAAAACTTCATAAATTACATCTGTGAGGCGTATAAAGGACCTGTTCTGCCAAGTGCTTGTAAAGCTTCATCCATTAGTGCCATTTGAAGATAAAAAGCATAATCTAGCCTTCCAGATACACCAAGATGACAGAGACGAGATGATGATAATGTTGATTTAATATGCAAGAAAGCAATCGAGGTGATAATATTATCATACACTGTTTGAATTATATCTTATCGTAAAAACCTCATACTTTAGAATTGGATTCAGTTTAATAAATAAATCAAGATAGAAGAACATGCTTGCAATGTATCTGTTTGAAATCAACTTTACTTTTTCATAATTCTATTTTAGCTAGAGTGTCTTACAAAATAGACTGACAAAAGAACCATTTCCAGACGGACGCAGATTGGATGGATGGGTGTGTAATATGTTATTGTATTTTCAAATGTTGGATTTTAGCATGTACTTTCAATAAATCTTTACATTAGTCTCTA TATGGGGTGCCAATACAATGACCTGAATCTACCCCTGACGTGAGGCCCAGTTTCTATTCCACGATAAACAACATGCAATGAATCTAAGATTCCCATGGGCTCCAATACGTTTACGATGTAACCCCCTGTTTTCAGCATCAGCAATTTCATCAGATTCCATTTGTAAGGAGATTCCAACTGTAGAGAAGAGATTCCCATGAAAAAAGTTGATTAATGTAGTGTAATCCATGGAGTCTTCGCCTAAACTCTGTTCCTTCCTTTACATTTCTTCTCTCATACTCCTTCTCTCCTCTTTTTCCCTTCCTCTGTCATCTGCTTCACCTTCCATATCCTCAACCTCCAATTATGGCACCCACAAAGTCTCCCTCAAACTCTATTATGAGTCCCTTTGTCCTTACAGCGCCAATTTCATCGTCAACTATCTGGTTAAGCTTTTCGATGACGATCTCATCTCCATAGTTGATCTCAGGCTCGTTCCTTATGGCAACGCAAGGGTTGGCCACAATGATTCCATCACTTGTCAGCATGGCCCTAATGAATGCCTATTGAACACTGTGGAAGCCTGTGCCATTAACGCCTGGCCTGAGCTGGTAAGACTTTCTCATGGGAGCATGACACTAGAGGATCATTTTCCTTTCATTTACTGCATTGAGTATCTGGTGTACAAACGGAAGTACACACAGTGGGAGTCATGTTTTGAGAAGTTGGGGTTGAATCCCAAGCCCATCAATGATTGCTACAATACCGAGCTTGGGAAAAAGCTTGAACTGGCATATGCAGCTGAGACCGATAATCTTCAGCCCCCTCACAAATACGTACCTTGGGTTGTTGTTGATGGGCAACCACTGTATGAGGATTATGAAAACTTCATAAATTACATCTGTGAGGCGTATAAAGGACCTGTTCTGCCAAGTGCTTGTAAAGCTTCATCCATTAGTGCCATTTGAAGATAAAAAGCATAATCTAGCCTTCCAGATACACCAAGATGACAGAGACGAGATGATGATAATGTTGATTTAATATGCAAGAAAGCAATCGAGGTGATAATATTATCATACACTGTTTGAATTATATCTTATCGTAAAAACCTCATACTTTAGAATTGGATTCAGTTTAATAAATAAATCAAGATAGAAGAACATGCTTGCAATGTATCTGTTTGAAATCAACTTTACTTTTTCATAATTCTATTTTAGCTAGAGTGTCTTACAAAATAGACTGACAAAAGAACCATTTCCAGACGGACGCAGATTGGATGGATGGGTGTGTAATATGTTATTGTATTTTCAAATGTTGGATTTTAGCATGTACTTTCAATAAATCTTTACATTAGTCTCTA ATGGAGTCTTCGCCTAAACTCTGTTCCTTCCTTTACATTTCTTCTCTCATACTCCTTCTCTCCTCTTTTTCCCTTCCTCTGTCATCTGCTTCACCTTCCATATCCTCAACCTCCAATTATGGCACCCACAAAGTCTCCCTCAAACTCTATTATGAGTCCCTTTGTCCTTACAGCGCCAATTTCATCGTCAACTATCTGGTTAAGCTTTTCGATGACGATCTCATCTCCATAGTTGATCTCAGGCTCGTTCCTTATGGCAACGCAAGGGTTGGCCACAATGATTCCATCACTTGTCAGCATGGCCCTAATGAATGCCTATTGAACACTGTGGAAGCCTGTGCCATTAACGCCTGGCCTGAGCTGGTAAGACTTTCTCATGGGAGCATGACACTAGAGGATCATTTTCCTTTCATTTACTGCATTGAGTATCTGGTGTACAAACGGAAGTACACACAGTGGGAGTCATGTTTTGAGAAGTTGGGGTTGAATCCCAAGCCCATCAATGATTGCTACAATACCGAGCTTGGGAAAAAGCTTGAACTGGCATATGCAGCTGAGACCGATAATCTTCAGCCCCCTCACAAATACGTACCTTGGGTTGTTGTTGATGGGCAACCACTGTATGAGGATTATGAAAACTTCATAAATTACATCTGTGAGGCGTATAAAGGACCTGTTCTGCCAAGTGCTTGTAAAGCTTCATCCATTAGTGCCATTTGA MESSPKLCSFLYISSLILLLSSFSLPLSSASPSISSTSNYGTHKVSLKLYYESLCPYSANFIVNYLVKLFDDDLISIVDLRLVPYGNARVGHNDSITCQHGPNECLLNTVEACAINAWPELVRLSHGSMTLEDHFPFIYCIEYLVYKRKYTQWESCFEKLGLNPKPINDCYNTELGKKLELAYAAETDNLQPPHKYVPWVVVDGQPLYEDYENFINYICEAYKGPVLPSACKASSISAI Homology
BLAST of Lsi02G012360 vs. ExPASy Swiss-Prot
Match: Q9SV73 (Gamma-interferon-responsive lysosomal thiol protein OS=Arabidopsis thaliana OX=3702 GN=GILT PE=2 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 7.7e-44 Identity = 90/196 (45.92%), Postives = 119/196 (60.71%), Query Frame = 0
BLAST of Lsi02G012360 vs. ExPASy Swiss-Prot
Match: P13284 (Gamma-interferon-inducible lysosomal thiol reductase OS=Homo sapiens OX=9606 GN=IFI30 PE=1 SV=3) HSP 1 Score: 108.6 bits (270), Expect = 9.8e-23 Identity = 70/198 (35.35%), Postives = 100/198 (50.51%), Query Frame = 0
BLAST of Lsi02G012360 vs. ExPASy Swiss-Prot
Match: B3SP85 (Gamma-interferon-inducible-lysosomal thiol reductase OS=Sus scrofa OX=9823 GN=IFI30 PE=2 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 2.4e-21 Identity = 72/197 (36.55%), Postives = 102/197 (51.78%), Query Frame = 0
BLAST of Lsi02G012360 vs. ExPASy Swiss-Prot
Match: O17861 (GILT-like protein F37H8.5 OS=Caenorhabditis elegans OX=6239 GN=F37H8.5 PE=1 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 2.4e-21 Identity = 63/200 (31.50%), Postives = 103/200 (51.50%), Query Frame = 0
BLAST of Lsi02G012360 vs. ExPASy Swiss-Prot
Match: A6QPN6 (Gamma-interferon-inducible lysosomal thiol reductase OS=Bos taurus OX=9913 GN=IFI30 PE=2 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 4.1e-21 Identity = 65/196 (33.16%), Postives = 103/196 (52.55%), Query Frame = 0
BLAST of Lsi02G012360 vs. ExPASy TrEMBL
Match: A0A5D3BE41 (Gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00630 PE=3 SV=1) HSP 1 Score: 415.2 bits (1066), Expect = 1.8e-112 Identity = 206/239 (86.19%), Postives = 210/239 (87.87%), Query Frame = 0
BLAST of Lsi02G012360 vs. ExPASy TrEMBL
Match: A0A6J1KAH6 (gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucurbita maxima OX=3661 GN=LOC111493159 PE=3 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 1.1e-109 Identity = 200/240 (83.33%), Postives = 211/240 (87.92%), Query Frame = 0
BLAST of Lsi02G012360 vs. ExPASy TrEMBL
Match: A0A6J1G8V6 (gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucurbita moschata OX=3662 GN=LOC111452006 PE=3 SV=1) HSP 1 Score: 403.7 bits (1036), Expect = 5.5e-109 Identity = 199/240 (82.92%), Postives = 212/240 (88.33%), Query Frame = 0
BLAST of Lsi02G012360 vs. ExPASy TrEMBL
Match: A0A0A0LXR3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533560 PE=3 SV=1) HSP 1 Score: 403.3 bits (1035), Expect = 7.1e-109 Identity = 201/239 (84.10%), Postives = 210/239 (87.87%), Query Frame = 0
BLAST of Lsi02G012360 vs. ExPASy TrEMBL
Match: A0A1S3C735 (gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucumis melo OX=3656 GN=LOC103497224 PE=3 SV=1) HSP 1 Score: 390.6 bits (1002), Expect = 4.8e-105 Identity = 190/227 (83.70%), Postives = 197/227 (86.78%), Query Frame = 0
BLAST of Lsi02G012360 vs. NCBI nr
Match: XP_038894277.1 (gamma-interferon-responsive lysosomal thiol protein-like [Benincasa hispida]) HSP 1 Score: 434.5 bits (1116), Expect = 6.0e-118 Identity = 213/241 (88.38%), Postives = 220/241 (91.29%), Query Frame = 0
BLAST of Lsi02G012360 vs. NCBI nr
Match: KAA0060011.1 (gamma-interferon-inducible lysosomal thiol reductase-like [Cucumis melo var. makuwa] >TYJ97269.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucumis melo var. makuwa]) HSP 1 Score: 415.2 bits (1066), Expect = 3.7e-112 Identity = 206/239 (86.19%), Postives = 210/239 (87.87%), Query Frame = 0
BLAST of Lsi02G012360 vs. NCBI nr
Match: XP_022998561.1 (gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita maxima]) HSP 1 Score: 406.0 bits (1042), Expect = 2.3e-109 Identity = 200/240 (83.33%), Postives = 211/240 (87.92%), Query Frame = 0
BLAST of Lsi02G012360 vs. NCBI nr
Match: XP_023523171.1 (gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 404.4 bits (1038), Expect = 6.6e-109 Identity = 200/240 (83.33%), Postives = 211/240 (87.92%), Query Frame = 0
BLAST of Lsi02G012360 vs. NCBI nr
Match: KAG6607336.1 (Gamma-interferon-responsive lysosomal thiol protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 404.4 bits (1038), Expect = 6.6e-109 Identity = 199/240 (82.92%), Postives = 212/240 (88.33%), Query Frame = 0
BLAST of Lsi02G012360 vs. TAIR 10
Match: AT1G07080.1 (Thioredoxin superfamily protein ) HSP 1 Score: 259.2 bits (661), Expect = 3.2e-69 Identity = 126/217 (58.06%), Postives = 160/217 (73.73%), Query Frame = 0
BLAST of Lsi02G012360 vs. TAIR 10
Match: AT5G01580.1 (gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 198.0 bits (502), Expect = 8.7e-51 Identity = 91/191 (47.64%), Postives = 125/191 (65.45%), Query Frame = 0
BLAST of Lsi02G012360 vs. TAIR 10
Match: AT4G12890.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 197.2 bits (500), Expect = 1.5e-50 Identity = 93/193 (48.19%), Postives = 126/193 (65.28%), Query Frame = 0
BLAST of Lsi02G012360 vs. TAIR 10
Match: AT4G12900.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 193.4 bits (490), Expect = 2.2e-49 Identity = 96/195 (49.23%), Postives = 128/195 (65.64%), Query Frame = 0
BLAST of Lsi02G012360 vs. TAIR 10
Match: AT4G12960.2 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 186.8 bits (473), Expect = 2.0e-47 Identity = 92/196 (46.94%), Postives = 121/196 (61.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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