Lsi02G011910 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi02G011910
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLEA_2 domain-containing protein
Locationchr02: 15003831 .. 15006365 (+)
RNA-Seq ExpressionLsi02G011910
SyntenyLsi02G011910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCTGCTGGACGCTGTCGGCGCAAAGGGAATGGAGTTGAACGGATCTGCTGACGACGATGAGAGATTTAGCAAGCTCGAACTGCTGACTGACGGATCTACATGGTGAGCTTGAATCTGGTGACTGATGGACTGCACGAAAACGGATCTGTTGATCGATGATGACGAACAGATTTGCTGACGAAATTGCATGACAACTGCGAGTCAAGGAGAGATTGGACGCCGAACGGATTTGCACGACTGGTGGATCTGCTGCTCGACGGCAACAACGGACGGCGAGAAAGGATGGGCAGCGGCAATGAGAGAGTTTTGGGGAGATGAAATTTTGTGAGAAATGAGAGAGAAGAAAGGCATAGGGAAATGAAAGAGAATTTTTTTATTAAAGAAAAGAATAAATAGATAGGTACAATGTCAGTTTTAAACTGACATTGTAGCCTCATCATTAATGTCAGTTTAAAACCGACATTAAAGATCCACTTTTTTTTTTTTTTTTAAGAAACCGACATTGTACATCTGATTTAGTTTTTTTCAACTGACATTAAAGACCAAATTTCTTGTAGTGATATGTCGAAAATGAGAATATGTATTGGGACATTTAATTTGAAAAAAGAGAGACATACATCACATTGACATTGTGTCAAGAACTAAATAACTTGTCAATCATTATTTAGTGTCAAGATTACAATACATTTGACAAATAAAAACATCAAGAGTTATCATATATGATACGTAATTAATGTCAAGAATTAATAGACTTGACGTGACACAAATGTCAAGTTCGTTAATATTCTTGACATGAAATATATATCCAAAAAATATATTTAGTTGTCCCTCTATTCTGGACATTAGACTATTTGGCGTTTTTAAAAGTGTCAAGACTATTGCTATTTGACATTCAAAAAAGCATCAAGTAACATAGTTTTATAGTAATGATGATTTGAAATGGCATACAATAAATATATACAAAATTTCAAAACAATTCAAGTGACCATAACCCCACTAAATCCACCTATGAGTACAAAGACCTAATCTACAAAAAGACTGAAATATAATAGCAATATGATGATTTTATGATTTGAATTACTCTATTCATTATTCAACATTTAAGATCAAAGTTAATTAATTTAAGAATAAATATTAATTTATAACTCTAAACTTTGAAGTTGTACAAATAAAATCTTAAACCAAGAATCGTACCAATTTAATTATTAAATTTTTGGAAGGATATAAATTTTCATTGGACTAATTTCGTATGAAATTTACATTTTGAATAAATTAAACTCTTAATTTTTTTTAAACCAATCAATTTACGTCTTTTATTATGACCACTTTTGAAAACCTTATATTAATTCTCACTAAACATGTTGGTTTAATAAAATAGATGATTAGAGTAAATGTATAGACGATTTTCAAAGATTTTTTTTAAAAATATCTAAATTGATTCATTTAGGAAAGTTAAGGGGTTTAATTGATACAAAGTTTTTTTTTCAAAACAAAACGGATATATGTATGAGGGTGTGAATTGATACATTAACAAAAGTTTAGATTTAAATTGATATACATATTAGTTCTAAGTTTAAATTGATACAATTCCTGAAGTTTATGATTAGAAATTGATGTTTTTCAATTTAAAATGCAACTAATATATAACATGACTTACAACATTAATTATAAGTTCAATCCCAATGGTGAAATGTAATTTGAATTTTCCACCCAATGTATACCATTTTCATTCACTATGTTTCAACATTTTTTTTATACATAAAAATGTATTTAAATCGAAATAGATTCATATATTTACTACCAAATAAAAAGTCAAAAAAAAAAAAAAAGCACATTAAAAACCAATCTTAGGGTAAGCTTGTTCAATCTCATAACTGAATTCGTGGCATGGCTAACTCCTCCATGGGCGGCCGGGCGCCGCATCCTCAACCCCTATCCCATCCCCATAGCCGCAACTCCTCACCCTTCCTCTGAGCCTTCGCCGCCGGCATGGTCTTCCTCCTTTTCATCGCTCTTTTCATCTTCCGCCCCATCCTCCCCATTAGTCGACTCACTTCAACTCGCCAATTTCTCCTCTGCCTCTGCCGCTGCCGCTGCCGCCTTCCCGTCCCTTATCTCCTCATGGGTTGTTGGATTTTCAGTCAACAACCCCAACAAGAAGCTCGCCATCTCATTCCAAAACCTTGAGTCCTCCATTTACTACAAAGATAACATTATCGCTCAAGCCCGAATTCACCGCTTCCTCCTCCGCCGAAGGAACTCAACGGCCATCGTCACTCCCTTCATTGCCGACTCGCCCGTCGATGAGTCGGTTTTGAATGAAATTAATGGGGACTTGGCGAATGGAGCAATTAACTTCACCGTCGTAGTTCTTGGCTATGCCAACTTCCAGATCGGTGTGTGGCGGTGGAGGGGCACCAATTTTCGGGTTCTTTGCAGCGATTTGTCTGTCGGATTCTCATCGCCGCCGAGTCCCAACGGCGGGTCCGGCCAGTTGGTTGGTGGCTCAAGGCAATGCCAGCTACGATGA

mRNA sequence

ATGGATCTGCTGGACGCTGTCGGCGCAAAGGGAATGGAGTTGAACGGATCTGCTGACGACGATGAGAGATTTAGCAAGCTCGAACTGCTGACTGACGGATCTACATGGGTAAGCTTGTTCAATCTCATAACTGAATTCGTGGCATGGCTAACTCCTCCATGGGCGGCCGGGCGCCGCATCCTCAACCCCTATCCCATCCCCATAGCCGCAACTCCTCACCCTTCCTCTGAGCCTTCGCCGCCGGCATGGTCTTCCTCCTTTTCATCGCTCTTTTCATCTTCCGCCCCATCCTCCCCATTAGTCGACTCACTTCAACTCGCCAATTTCTCCTCTGCCTCTGCCGCTGCCGCTGCCGCCTTCCCGTCCCTTATCTCCTCATGGGTTGTTGGATTTTCAGTCAACAACCCCAACAAGAAGCTCGCCATCTCATTCCAAAACCTTGAGTCCTCCATTTACTACAAAGATAACATTATCGCTCAAGCCCGAATTCACCGCTTCCTCCTCCGCCGAAGGAACTCAACGGCCATCGTCACTCCCTTCATTGCCGACTCGCCCGTCGATGAGTCGGTTTTGAATGAAATTAATGGGGACTTGGCGAATGGAGCAATTAACTTCACCGTCGTAGTTCTTGGCTATGCCAACTTCCAGATCGGTGTGTGGCGGTGGAGGGGCACCAATTTTCGGGTTCTTTGCAGCGATTTGTCTGTCGGATTCTCATCGCCGCCGAGTCCCAACGGCGGGTCCGGCCAGTTGGTTGGTGGCTCAAGGCAATGCCAGCTACGATGA

Coding sequence (CDS)

ATGGATCTGCTGGACGCTGTCGGCGCAAAGGGAATGGAGTTGAACGGATCTGCTGACGACGATGAGAGATTTAGCAAGCTCGAACTGCTGACTGACGGATCTACATGGGTAAGCTTGTTCAATCTCATAACTGAATTCGTGGCATGGCTAACTCCTCCATGGGCGGCCGGGCGCCGCATCCTCAACCCCTATCCCATCCCCATAGCCGCAACTCCTCACCCTTCCTCTGAGCCTTCGCCGCCGGCATGGTCTTCCTCCTTTTCATCGCTCTTTTCATCTTCCGCCCCATCCTCCCCATTAGTCGACTCACTTCAACTCGCCAATTTCTCCTCTGCCTCTGCCGCTGCCGCTGCCGCCTTCCCGTCCCTTATCTCCTCATGGGTTGTTGGATTTTCAGTCAACAACCCCAACAAGAAGCTCGCCATCTCATTCCAAAACCTTGAGTCCTCCATTTACTACAAAGATAACATTATCGCTCAAGCCCGAATTCACCGCTTCCTCCTCCGCCGAAGGAACTCAACGGCCATCGTCACTCCCTTCATTGCCGACTCGCCCGTCGATGAGTCGGTTTTGAATGAAATTAATGGGGACTTGGCGAATGGAGCAATTAACTTCACCGTCGTAGTTCTTGGCTATGCCAACTTCCAGATCGGTGTGTGGCGGTGGAGGGGCACCAATTTTCGGGTTCTTTGCAGCGATTTGTCTGTCGGATTCTCATCGCCGCCGAGTCCCAACGGCGGGTCCGGCCAGTTGGTTGGTGGCTCAAGGCAATGCCAGCTACGATGA

Protein sequence

MDLLDAVGAKGMELNGSADDDERFSKLELLTDGSTWVSLFNLITEFVAWLTPPWAAGRRILNPYPIPIAATPHPSSEPSPPAWSSSFSSLFSSSAPSSPLVDSLQLANFSSASAAAAAAFPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLRRRNSTAIVTPFIADSPVDESVLNEINGDLANGAINFTVVVLGYANFQIGVWRWRGTNFRVLCSDLSVGFSSPPSPNGGSGQLVGGSRQCQLR
Homology
BLAST of Lsi02G011910 vs. ExPASy TrEMBL
Match: A0A5D3E5N0 (Protein YLS9 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001820 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 2.3e-60
Identity = 125/161 (77.64%), Postives = 138/161 (85.71%), Query Frame = 0

Query: 101 VDSLQLANFSSASAAAAAAFPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQ 160
           +DSLQLANFSSA+AAA         SW+VGFS+NNPNKKLAISFQNL+SSIYYKDNIIAQ
Sbjct: 63  LDSLQLANFSSAAAAA--------PSWIVGFSINNPNKKLAISFQNLDSSIYYKDNIIAQ 122

Query: 161 ARIHRFLLRRRNSTAIVTPFIADSPVDESVLNEINGDLANGAINFTVVVLGYANFQIGVW 220
           ARI RFLLR RNST +V PFIA S VDESVLN+INGDLA G INFTVVVLGYANFQI +W
Sbjct: 123 ARIRRFLLRPRNSTTLVIPFIAVSLVDESVLNDINGDLARGTINFTVVVLGYANFQISLW 182

Query: 221 RWRGTNFRVLCSDLSVGFSSPPSPNGGSGQLVGGSRQCQLR 262
           +WRGTN +V+CSDLSVGFS PPS  G SGQLVGGS+QCQL+
Sbjct: 183 QWRGTNIQVVCSDLSVGFSWPPSLAGRSGQLVGGSKQCQLQ 215

BLAST of Lsi02G011910 vs. ExPASy TrEMBL
Match: A0A1S3CJS5 (uncharacterized protein LOC103501757 OS=Cucumis melo OX=3656 GN=LOC103501757 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 2.3e-60
Identity = 125/161 (77.64%), Postives = 138/161 (85.71%), Query Frame = 0

Query: 101 VDSLQLANFSSASAAAAAAFPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQ 160
           +DSLQLANFSSA+AAA         SW+VGFS+NNPNKKLAISFQNL+SSIYYKDNIIAQ
Sbjct: 63  LDSLQLANFSSAAAAA--------PSWIVGFSINNPNKKLAISFQNLDSSIYYKDNIIAQ 122

Query: 161 ARIHRFLLRRRNSTAIVTPFIADSPVDESVLNEINGDLANGAINFTVVVLGYANFQIGVW 220
           ARI RFLLR RNST +V PFIA S VDESVLN+INGDLA G INFTVVVLGYANFQI +W
Sbjct: 123 ARIRRFLLRPRNSTTLVIPFIAVSLVDESVLNDINGDLARGTINFTVVVLGYANFQISLW 182

Query: 221 RWRGTNFRVLCSDLSVGFSSPPSPNGGSGQLVGGSRQCQLR 262
           +WRGTN +V+CSDLSVGFS PPS  G SGQLVGGS+QCQL+
Sbjct: 183 QWRGTNIQVVCSDLSVGFSWPPSLAGRSGQLVGGSKQCQLQ 215

BLAST of Lsi02G011910 vs. ExPASy TrEMBL
Match: A0A0A0LT76 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G169920 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 8.7e-52
Identity = 113/160 (70.62%), Postives = 127/160 (79.38%), Query Frame = 0

Query: 101 VDSLQLANFSSASAAAAAAFPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQ 160
           +DSLQ  NFS+ +AA          SWVVGFS+NNPNKKLAISF+NLESSIYYKDNIIAQ
Sbjct: 63  LDSLQFVNFSATAAA---------PSWVVGFSINNPNKKLAISFRNLESSIYYKDNIIAQ 122

Query: 161 ARIHRFLLRRRNSTAIVTPFIADSPVDESVLNEINGDLANGAINFTVVVLGYANFQIGVW 220
           AR  RFLL  RNST +V+PFIAD  VDESVLN+I+GDL  G I+FTVVVLGYAN +IGVW
Sbjct: 123 ARTRRFLLPPRNSTTLVSPFIADLLVDESVLNDIHGDLERGTIDFTVVVLGYANVEIGVW 182

Query: 221 RWRGTNFRVLCSDLSVGFSSPPSPNGGSGQLVGGSRQCQL 261
           R  GT+ RV+CSDLSV FS PP  +G SGQLVGGSRQC L
Sbjct: 183 RPIGTDIRVVCSDLSVKFSWPPGLSGRSGQLVGGSRQCHL 213

BLAST of Lsi02G011910 vs. ExPASy TrEMBL
Match: A0A2I4HLK5 (uncharacterized protein At1g08160-like OS=Juglans regia OX=51240 GN=LOC109019244 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 3.0e-28
Identity = 77/161 (47.83%), Postives = 103/161 (63.98%), Query Frame = 0

Query: 101 VDSLQLANFSSASAAAAAAFPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQ 160
           VDSL L+NFSSAS+       SL  +W V FSV NPNKKL+IS++ + SS++YK   I+ 
Sbjct: 93  VDSLSLSNFSSASS-------SLTGNWNVRFSVYNPNKKLSISYEEVLSSLFYKKEFISN 152

Query: 161 ARIHRFLLRRRNSTAIVTPF-IADSPVDESVLNEINGDLANGAINFTVVVLGYANFQIGV 220
            R+  F L +RN T +   F  AD+ VD  V+N+INGD A G ++F V+V  +  F+ G 
Sbjct: 153 TRMPPFKLGKRNQTVLDVSFSAADTYVDRWVVNDINGDRARGTVSFNVLVKAWVQFRAGA 212

Query: 221 WRWRGTNFRVLCSDLSVGFSSPPSPNGGSGQLVGGSRQCQL 261
           WR R  + RVLC  L+VG SS  S   GSG LVGG+R C++
Sbjct: 213 WRPRNRSIRVLCEGLAVGLSSNSS---GSGMLVGGARDCRV 243

BLAST of Lsi02G011910 vs. ExPASy TrEMBL
Match: A0A2P5BEN8 (Late embryogenesis abundant protein OS=Trema orientale OX=63057 GN=TorRG33x02_323820 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 4.5e-24
Identity = 68/161 (42.24%), Postives = 99/161 (61.49%), Query Frame = 0

Query: 101 VDSLQLANFSSASAAAAAAFPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQ 160
           VDSL L NF+++S+      P++  +W VGFSV NPNKK++I++  L+S ++YK   +++
Sbjct: 108 VDSLSLTNFNTSSS------PAISGNWAVGFSVYNPNKKMSITYDELDSDVFYKSAFLSE 167

Query: 161 ARIHRFLLRRRNSTAIVTPF-IADSPVDESVLNEINGDLANGAINFTVVVLGYANFQIGV 220
            RI  F    R  TAI   F  A+S VD+ V+  I+ D   G +NF V VL    F+ G 
Sbjct: 168 TRISPFTQGTRTQTAINATFSAANSYVDDWVVKGIDADRGRGTVNFNVRVLARVVFRTGG 227

Query: 221 WRWRGTNFRVLCSDLSVGFSSPPSPNGGSGQLVGGSRQCQL 261
           WR R    RVLC ++ VG SS    + GSG+LVGG+R+C++
Sbjct: 228 WRLRRRLLRVLCENVGVGLSS----SSGSGKLVGGARECRV 258

BLAST of Lsi02G011910 vs. NCBI nr
Match: XP_008463664.1 (PREDICTED: uncharacterized protein LOC103501757 [Cucumis melo] >KAA0035579.1 protein YLS9 isoform X2 [Cucumis melo var. makuwa] >TYK30956.1 protein YLS9 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 242.3 bits (617), Expect = 4.7e-60
Identity = 125/161 (77.64%), Postives = 138/161 (85.71%), Query Frame = 0

Query: 101 VDSLQLANFSSASAAAAAAFPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQ 160
           +DSLQLANFSSA+AAA         SW+VGFS+NNPNKKLAISFQNL+SSIYYKDNIIAQ
Sbjct: 63  LDSLQLANFSSAAAAA--------PSWIVGFSINNPNKKLAISFQNLDSSIYYKDNIIAQ 122

Query: 161 ARIHRFLLRRRNSTAIVTPFIADSPVDESVLNEINGDLANGAINFTVVVLGYANFQIGVW 220
           ARI RFLLR RNST +V PFIA S VDESVLN+INGDLA G INFTVVVLGYANFQI +W
Sbjct: 123 ARIRRFLLRPRNSTTLVIPFIAVSLVDESVLNDINGDLARGTINFTVVVLGYANFQISLW 182

Query: 221 RWRGTNFRVLCSDLSVGFSSPPSPNGGSGQLVGGSRQCQLR 262
           +WRGTN +V+CSDLSVGFS PPS  G SGQLVGGS+QCQL+
Sbjct: 183 QWRGTNIQVVCSDLSVGFSWPPSLAGRSGQLVGGSKQCQLQ 215

BLAST of Lsi02G011910 vs. NCBI nr
Match: KGN65002.2 (hypothetical protein Csa_022841 [Cucumis sativus])

HSP 1 Score: 139.4 bits (350), Expect = 4.3e-29
Identity = 71/100 (71.00%), Postives = 80/100 (80.00%), Query Frame = 0

Query: 161 ARIHRFLLRRRNSTAIVTPFIADSPVDESVLNEINGDLANGAINFTVVVLGYANFQIGVW 220
           AR  RFLL  RNST +V+PFIAD  VDESVLN+I+GDL  G I+FTVVVLGYAN +IGVW
Sbjct: 81  ARTRRFLLPPRNSTTLVSPFIADLLVDESVLNDIHGDLERGTIDFTVVVLGYANVEIGVW 140

Query: 221 RWRGTNFRVLCSDLSVGFSSPPSPNGGSGQLVGGSRQCQL 261
           R  GT+ RV+CSDLSV FS PP  +G SGQLVGGSRQC L
Sbjct: 141 RPIGTDIRVVCSDLSVKFSWPPGLSGRSGQLVGGSRQCHL 180

BLAST of Lsi02G011910 vs. NCBI nr
Match: XP_018857049.1 (uncharacterized protein At1g08160-like [Juglans regia] >KAF5447433.1 hypothetical protein F2P56_032987 [Juglans regia])

HSP 1 Score: 135.6 bits (340), Expect = 6.2e-28
Identity = 77/161 (47.83%), Postives = 103/161 (63.98%), Query Frame = 0

Query: 101 VDSLQLANFSSASAAAAAAFPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQ 160
           VDSL L+NFSSAS+       SL  +W V FSV NPNKKL+IS++ + SS++YK   I+ 
Sbjct: 93  VDSLSLSNFSSASS-------SLTGNWNVRFSVYNPNKKLSISYEEVLSSLFYKKEFISN 152

Query: 161 ARIHRFLLRRRNSTAIVTPF-IADSPVDESVLNEINGDLANGAINFTVVVLGYANFQIGV 220
            R+  F L +RN T +   F  AD+ VD  V+N+INGD A G ++F V+V  +  F+ G 
Sbjct: 153 TRMPPFKLGKRNQTVLDVSFSAADTYVDRWVVNDINGDRARGTVSFNVLVKAWVQFRAGA 212

Query: 221 WRWRGTNFRVLCSDLSVGFSSPPSPNGGSGQLVGGSRQCQL 261
           WR R  + RVLC  L+VG SS  S   GSG LVGG+R C++
Sbjct: 213 WRPRNRSIRVLCEGLAVGLSSNSS---GSGMLVGGARDCRV 243

BLAST of Lsi02G011910 vs. NCBI nr
Match: XP_042956465.1 (uncharacterized protein At1g08160 [Carya illinoinensis] >KAG6632036.1 hypothetical protein CIPAW_13G131000 [Carya illinoinensis] >KAG6682257.1 hypothetical protein I3842_13G129700 [Carya illinoinensis] >KAG7950481.1 hypothetical protein I3843_13G114700 [Carya illinoinensis])

HSP 1 Score: 132.5 bits (332), Expect = 5.3e-27
Identity = 75/161 (46.58%), Postives = 102/161 (63.35%), Query Frame = 0

Query: 101 VDSLQLANFSSASAAAAAAFPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQ 160
           VDSL L+NFSSAS+       SL  +W V FSV NPNKKL+IS++ + +S++YK   I+ 
Sbjct: 93  VDSLSLSNFSSASS-------SLTGNWNVRFSVYNPNKKLSISYEEVLASLFYKSEFISN 152

Query: 161 ARIHRFLLRRRNSTAIVTPF-IADSPVDESVLNEINGDLANGAINFTVVVLGYANFQIGV 220
            ++  F LR+RN T +   F  AD+ V   V+N+INGD A G ++F V+V  +  F+ G 
Sbjct: 153 TQMPPFKLRKRNQTVLDVSFSAADAYVARWVVNDINGDRARGTVSFNVMVKAWVQFRAGA 212

Query: 221 WRWRGTNFRVLCSDLSVGFSSPPSPNGGSGQLVGGSRQCQL 261
           WR R  + RVLC  L+VG SS  S   GSG LVGG R C++
Sbjct: 213 WRPRNRSIRVLCEGLAVGLSSNSS---GSGMLVGGERDCRV 243

BLAST of Lsi02G011910 vs. NCBI nr
Match: KAG2674349.1 (hypothetical protein I3760_13G129800 [Carya illinoinensis])

HSP 1 Score: 132.1 bits (331), Expect = 6.9e-27
Identity = 74/161 (45.96%), Postives = 102/161 (63.35%), Query Frame = 0

Query: 101 VDSLQLANFSSASAAAAAAFPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQ 160
           VDSL L+NFSSAS+       SL  +W V FSV NPNKKL+IS++ + +S++YK   I+ 
Sbjct: 93  VDSLSLSNFSSASS-------SLTGNWNVRFSVYNPNKKLSISYEEVLASLFYKSEFISN 152

Query: 161 ARIHRFLLRRRNSTAIVTPF-IADSPVDESVLNEINGDLANGAINFTVVVLGYANFQIGV 220
            ++  F LR+RN T +   F  AD+ V   V+N+INGD A G ++F V+V  +  F+ G 
Sbjct: 153 TQMPPFKLRKRNQTVLDVSFSAADAYVARWVVNDINGDRARGTVSFNVMVKAWVQFRAGA 212

Query: 221 WRWRGTNFRVLCSDLSVGFSSPPSPNGGSGQLVGGSRQCQL 261
           WR R  + RVLC  L++G SS  S   GSG LVGG R C++
Sbjct: 213 WRPRNRSIRVLCEGLAIGLSSNSS---GSGMLVGGERDCRV 243

BLAST of Lsi02G011910 vs. TAIR 10
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 46.2 bits (108), Expect = 4.6e-05
Identity = 27/104 (25.96%), Postives = 52/104 (50.00%), Query Frame = 0

Query: 121 PSLISSWVVGFSVN--NPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLRRRNSTAIVT 180
           P+ + +  + F+V   NPN+ + + F ++E SIYYKD  +    +     ++  +T IVT
Sbjct: 88  PTGVENARIAFNVTILNPNQHMGVYFDSMEGSIYYKDQRVGLIPLLNPFFQQPTNTTIVT 147

Query: 181 PFI--ADSPVDESVLNEINGDLANGAINFTVVVLGYANFQIGVW 221
             +  A   V+ +   E + D A G + F + ++    F++  W
Sbjct: 148 GTLTGASLTVNSNRWTEFSNDRAQGTVGFRLDIVSTIRFKLHRW 191

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3E5N02.3e-6077.64Protein YLS9 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CJS52.3e-6077.64uncharacterized protein LOC103501757 OS=Cucumis melo OX=3656 GN=LOC103501757 PE=... [more]
A0A0A0LT768.7e-5270.63LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G169920 PE=4 ... [more]
A0A2I4HLK53.0e-2847.83uncharacterized protein At1g08160-like OS=Juglans regia OX=51240 GN=LOC109019244... [more]
A0A2P5BEN84.5e-2442.24Late embryogenesis abundant protein OS=Trema orientale OX=63057 GN=TorRG33x02_32... [more]
Match NameE-valueIdentityDescription
XP_008463664.14.7e-6077.64PREDICTED: uncharacterized protein LOC103501757 [Cucumis melo] >KAA0035579.1 pro... [more]
KGN65002.24.3e-2971.00hypothetical protein Csa_022841 [Cucumis sativus][more]
XP_018857049.16.2e-2847.83uncharacterized protein At1g08160-like [Juglans regia] >KAF5447433.1 hypothetica... [more]
XP_042956465.15.3e-2746.58uncharacterized protein At1g08160 [Carya illinoinensis] >KAG6632036.1 hypothetic... [more]
KAG2674349.16.9e-2745.96hypothetical protein I3760_13G129800 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
AT4G05220.14.6e-0525.96Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA_2 subgroupPFAMPF03168LEA_2coord: 132..226
e-value: 4.6E-7
score: 30.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 239..261
NoneNo IPR availablePANTHERPTHR31852:SF2GRPE-LIKE PROTEINcoord: 101..259
NoneNo IPR availablePANTHERPTHR31852LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 101..259

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G011910.1Lsi02G011910.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane