Lsi02G011760 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G011760
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Ras-related protein Rab-2A
Location	chr02: 14468883 .. 14473930 (-)
RNA-Seq Expression	Lsi02G011760
Synteny	Lsi02G011760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGAAAATCAGAAAGTTGAGTGTAGAAGGGTCTGATGAAAGATCAAGTGGCGAATAAAAAGTTTGTATATTAATAGGAGTTGCCAGCTCAAAGTCAGAGATCGCAATTCAATCCAACACGCAGTGGCGTCCCTTTGCCTTGCCTCGTTGGACCTCTGCAATTGAAACTCCCTCTTTACCGTTTCTCAACGTTTCCCCATTTTTTCCTTCCGCCGATCCTCCGCCTCCGCTTAATTCCCTTTTGTATTCGCTCATTCTTCCATTTTCTCTCCCGCCCGATCTCGTTTTTCCCACCGGAATGTCATACGCTTACCTTTTCAAGTACATCATCATTGGTGATACTGGTACGCCTTTGTATACATGCTTTTTCGTTTTCGATCTGATTCCTGAATTGGGTCGCTTCGATTATGGCTTTATTTGTGCTTAATCTACGTGATTGATCTGTTTGTCTGATTTGATGATGTGAATGCTTTTCTGTTTGGTTTCTTCCTTTTTTAACTTGGGAATTACTGCGTTTGAGCTTTGAATTTGGATGCTGTTTGCTGTTTGTCGATTGATTGCGGGGATTGAAACTGAATTGTGTGTTGTATTCTCCAGGAGTTGGAAAATCATGTCTTCTTCTCCAGTTTACCGATAAGAGATTTCAGCCTGTTCATGACTTGACTATTGGTGTAGAATTTGGTGCGAGGATGATCACCATCGACAACAAACCAATCAAGTTGCAAATTTGGGATACGGTTAGCTATCTCTCTTCATTCTTTCTTGGGAATTTCTGGTTTCAAGTCCCAAGATATTTAACTGTATCACTTGTATATTGAATTGAAGGAATTCTATTCTGGTTTATGGATTAGTATAGTATTTTACCTTATCTTGGATCCATTTAAAGGAAAATCATCTGCAATTGTACTAGAGACAAGCGGGTGATCTGCTGCTATAAGCTTAAATCTTAGTTCAAATCAAAGGCCCAAACAATAACTAATAGAACTAGGAAACCTCCATTCATTCTTACTCTATAGAGCCCATACTGCTGTGTGACATATATTGATGTTTAGAGATTTAATTTATCATAACATGACTTTAAATCTAAAAGAAAATTTCTATAATTTATGCAACACTTAATGTGCTCTGGTTAAACTTAGAGCATACATGTGTAACACAGCATACCTATTAATGGCCACTATTGAAAATTACTATTTGCTCTGTATGAAATGATGATCTTTATTGAACCAACGTTGTGTATTGCTCATTTTTGTTACACATATATAACATAATAATGGTACAGATGTTCGTCCCTTGCACTCTTTCCATTTAGATTTGTCCTTTTGTTCCATATGAATTTCATCAAGTTTTTCTAATTTTGAAGTTTCCCAAAAATATTACAGGCTGGTCAAGAATCTTTCAGGTCTATTACGAGGTCCTACTATAGAGGGGCTGCTGGTGCATTGCTTGTCTATGACATCACCAGGTCTTGCTACCTCTTGGTTTCCCTTCTAACTTAATTCTACTTTTGAGTTTTGATGTAGGAATGATTTTGTACTTTAGTTATTTGTATTTGATGCCTTATGCAGCCTATGGGTTGTGACTGATGGTGTGTTTTTCCAAGCTGGTCAAGGTTGTTAAGTTTTAGCAGTTAGAGTTAGTATATTGGTTACGCTTCAGTAATAAATATTCATTGTTTAGGTTGTATGCAATTCATTGAAAAGTTCAATTCCCTGAGGCTACGTGCCGATTCCAATATTTGTATAAGAGCTGTTAGAAGATTTCTAAGTCTTTTGGTATTCGAGTTGTTGCCTTGTGTAGCCGTTGGGTTGTGATCGTTGCTATGTTTAACTTGGCTGGCTAAGGTTGTTAGGTTTTAGCTACTGGAGCTAGTTGGTTAGTTAGGGTTCAAGTTGTTGCTTTATTGGTATATTAGTATATATTTTTTTTTAAAATAGAAACAAGCCTCTTCATTGAGATAATAAAATGAGACTAATGCTCAAAGTACAAGCGTAAGATACAAATAAAGAAAAGAACAAGTGATATATGTTCATTGTTTTGGTTGTATGCAATTCATTCCTAATTTAATGGAGCTTCGGCTACACCAATTTTCTTGTGAATAAGTGAGGGGAGCTTTTGAACTCCATTCTCCTAATGGGCCTGTAGCATGTGGGATAATTGTTAGAAAGATATTTTAGAAACTAGGAGAGGATACTCCTATTCCTTTTGCAATTCATTATTGATCTTTAAACGGTCATCTTGAAGTTGAAATATAATTCATGTTGGGAGTGAGAATTTGTAACATCCCTGATAGACCATGTTATAGTGCTTATATTCATGGTTATATTATTGTAAATATATTAGTAATGTTGTCCTTTAAGGTTATTTTACTTTCTCTTAGGTTACCCTTGTACACTTGATGAATCAACTGCTTTCATTGACAAAGTGAAAGAATACAAGGGCATACGACATAAAGTTATTCATTTATTTTTATTTTGAGCAATTAAATAATTAATTAATATAACAATATATTAAAAAATACTAATTTAATTCATGGCAACATTAATTATTCCCTTACATTTAATTAAGGGTTGTTCGAAATGAGCCAAAATATTTATAAATATAGCAAAATATCGTTGTCTATAAATGTCTATCACTGATAGACAGTGATATTTTGCTATATTTGAAAATATTTTCAGCAGTTTTGTCATTTAAAACAATTACCCTTTAATTAAGTAATTATTTAATTTTAGAATTCATATACAAAATTGGTAAAAAAAATATAGATATTTATCTTCTAGTTCCAAACATAGACATTAATTATCCTAGTCATTTAAAACTCAGATATTTAATATCTACATCCATGAAACAATATCTGAAATCCAAACGGGCCGTTAGTGTTTTACGGACCCTAAGTTACCCAAATGTATTCATGTAGGAAAGGGAAGAAGGGGGACCAAGTGATGTAAGTACATGAGGAGTGGCGGGCATATGTGTGATTTTGTGGTTAGTTATACTTATACCTTGTGTGTGTTTGTCAGAGGGGGGTATTAAGGCCGCTTATGGCAGAGAGGAGGCTATCTTTTTTGCATTTTGCTCAATTGTTAGCTCTTTGGGCATAGTGGAGATGAGGGGAGCGTTGGCATTGCCAAAACAGTAAATATATAATTTGAGATCTACCAATCCCTCGGTCACGAGGAAACCTTGTGCTTGAAAGTAAATAAAACTTGGCCAGAAAGGTTACAGGTTGGTGGGACTGACCATTATATTACACGGTGGTTGCTGTTTGTAGATGCTAATCTAGTAGAATTTTGGGTGCTCAACAGAAAGTTTAAATATGAATGCTGGACTTTTCTTGGGTTATGGAACTATGGTTTATTTTTTTCTTGTATAGTTGTAGGTTTGTAGGAGAGGAATAACTTAAGCATGAGCATAGTTGTTAAGATAATGCGGTCAGTCAGGTTTAACAGCAGTTCTTACCTGTTCCAATTGCATGACATTTGGCGTGATTCTGCCATCTAATTTAACTTGATAGACTGCATAAGCTGAAATGAGGCGTCACCATCATGCTTTAAATTCCTTGAGTGAATGAGGATATCAGAACTTAAAGTTATGTGGCTGTCATACTTTTCAGGAGGGAAACTTTTAATCACTTGGCTAGCTGGCTTGAAGATGCAAGACAACATGCTAATGCAAACATGACAATAATGCTGATTGGTAACAAGTGTGATCTTGCACACCGAAGGGCTGTCAGCACTGAGGAAGGGGAGCAGTTTGCAAAGGAGCATGGTTTAATTTTTATGGAGGCCTCTGCTAAAACTGCTCAAAATGTTGAGGAGGTGACACAATAGACATAAATTGTCTTTCACAAAATTTAAGTTGGATGTTCATCTCTAAACTAAGAACATGACATAAAAGATATATTATTAATCTTTTTGATATATTGTAAACAATTTCTGTCCCACAATTTTCGTGATGATCAATCATTTTTTACAGGCATTCATTAAAACTGCTGCAACTATATACAAGAAGATCCAGGATGGAGTGTTCGATGTATCTAATGAGGTATGCAATATTTTTTTACTTCTTGCTGCTAAATGTTTATGGAAGTATTTTAGTTATACCATTGTATTTCCTCTTGCATATATTTCCTCTTGCATTATGTGTGAGAGTACTGGGGTATATGGATAACATTCATAGGATATTAGTAAGGGGTGTTATGGGTAATTAGCTAGTGGTGGTTTGGTTATAAATAAAGAAGAGTTGGGCACCTTAGAGGGTGTGGAACGTTGTGGTGAGAATTTCCATTGTGGGACTTGGGAGAGAGAGAACTCCCTCGAAAGGCTGTGGATATGTTGTAAGTTCTATTGGTATTGCAGCTTATTTCTATCTTGTGTTGGATCGAGTTTTGTAGGTTGTTCTGAGATTCACCTTCGTAGGGGGTTTTGGTTTTACTTTTGACTGAGCTACCTGAAGTGGTGGCTTCACTGTTAGTCCAAAATTATCTAGCTGTTTGAATTGGATGGTGTTTGGCCAATGGCGTTTATCCACTGCTGTAAATGACAGAATTTAGATTCTAGTTTCGATTGTTAGAATTTTTATTATCTTTTCTAGACGATGGATGAATAGCGATTAGAATGATGTAATCGAAGCTATGTTTCATCTTATGTGCAGTCATATGGGATAAAAGTTGGATATGGTGGAATTCCAGGGCCATCAGGAGGCAGAGATGGTACTACAGCTCAATCTGGGGGTTGTTGCAGTTAAATCTTGCTGCTCAAATCTAGTACAAACTTTGCTGTTCTCTTTAAATTCCTTTGTTAATTATGAGTGTCAGAAAACTCCCCCTCCCCCTCAAAAAAGAAGAAAAAAAAAACCATAATAGGTTATCACTTGTATAATCATTTGATGTGTTATGCCTTTTTTCTTCTTTTCAACAAGTTAATTATGTCTTGATCATATTTGATTGTAAAGGTAAATTCATATTAATGCATGTTATTTGTGACAAAATTGCATCCTCCTTTTTTATTGGTTAGTATATGATTTGTACCTGAACGTTTTATATACCC

mRNA sequence

AAAGAAAATCAGAAAGTTGAGTGTAGAAGGGTCTGATGAAAGATCAAGTGGCGAATAAAAAGTTTGTATATTAATAGGAGTTGCCAGCTCAAAGTCAGAGATCGCAATTCAATCCAACACGCAGTGGCGTCCCTTTGCCTTGCCTCGTTGGACCTCTGCAATTGAAACTCCCTCTTTACCGTTTCTCAACGTTTCCCCATTTTTTCCTTCCGCCGATCCTCCGCCTCCGCTTAATTCCCTTTTGTATTCGCTCATTCTTCCATTTTCTCTCCCGCCCGATCTCGTTTTTCCCACCGGAATGTCATACGCTTACCTTTTCAAGTACATCATCATTGGTGATACTGGAGTTGGAAAATCATGTCTTCTTCTCCAGTTTACCGATAAGAGATTTCAGCCTGTTCATGACTTGACTATTGGTGTAGAATTTGGTGCGAGGATGATCACCATCGACAACAAACCAATCAAGTTGCAAATTTGGGATACGGCTGGTCAAGAATCTTTCAGGTCTATTACGAGGTCCTACTATAGAGGGGCTGCTGGTGCATTGCTTGTCTATGACATCACCAGGAGGGAAACTTTTAATCACTTGGCTAGCTGGCTTGAAGATGCAAGACAACATGCTAATGCAAACATGACAATAATGCTGATTGGTAACAAGTGTGATCTTGCACACCGAAGGGCTGTCAGCACTGAGGAAGGGGAGCAGTTTGCAAAGGAGCATGGTTTAATTTTTATGGAGGCCTCTGCTAAAACTGCTCAAAATGTTGAGGAGGCATTCATTAAAACTGCTGCAACTATATACAAGAAGATCCAGGATGGAGTGTTCGATGTATCTAATGAGTCATATGGGATAAAAGTTGGATATGGTGGAATTCCAGGGCCATCAGGAGGCAGAGATGGTACTACAGCTCAATCTGGGGGTTGTTGCAGTTAAATCTTGCTGCTCAAATCTAGTACAAACTTTGCTGTTCTCTTTAAATTCCTTTGTTAATTATGAGTGTCAGAAAACTCCCCCTCCCCCTCAAAAAAGAAGAAAAAAAAAACCATAATAGGTTATCACTTGTATAATCATTTGATGTGTTATGCCTTTTTTCTTCTTTTCAACAAGTTAATTATGTCTTGATCATATTTGATTGTAAAGGTAAATTCATATTAATGCATGTTATTTGTGACAAAATTGCATCCTCCTTTTTTATTGGTTAGTATATGATTTGTACCTGAACGTTTTATATACCC

Coding sequence (CDS)

ATGTCATACGCTTACCTTTTCAAGTACATCATCATTGGTGATACTGGAGTTGGAAAATCATGTCTTCTTCTCCAGTTTACCGATAAGAGATTTCAGCCTGTTCATGACTTGACTATTGGTGTAGAATTTGGTGCGAGGATGATCACCATCGACAACAAACCAATCAAGTTGCAAATTTGGGATACGGCTGGTCAAGAATCTTTCAGGTCTATTACGAGGTCCTACTATAGAGGGGCTGCTGGTGCATTGCTTGTCTATGACATCACCAGGAGGGAAACTTTTAATCACTTGGCTAGCTGGCTTGAAGATGCAAGACAACATGCTAATGCAAACATGACAATAATGCTGATTGGTAACAAGTGTGATCTTGCACACCGAAGGGCTGTCAGCACTGAGGAAGGGGAGCAGTTTGCAAAGGAGCATGGTTTAATTTTTATGGAGGCCTCTGCTAAAACTGCTCAAAATGTTGAGGAGGCATTCATTAAAACTGCTGCAACTATATACAAGAAGATCCAGGATGGAGTGTTCGATGTATCTAATGAGTCATATGGGATAAAAGTTGGATATGGTGGAATTCCAGGGCCATCAGGAGGCAGAGATGGTACTACAGCTCAATCTGGGGGTTGTTGCAGTTAA

Protein sequence

MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGTTAQSGGCCS

Homology

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BLAST of Lsi02G011760 vs. ExPASy Swiss-Prot
Match: P92963 (Ras-related protein RABB1c OS=Arabidopsis thaliana OX=3702 GN=RABB1C PE=1 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 6.0e-117
Identity = 207/210 (98.57%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           ESYGIKVGYGGIPGPSGGRDG+T+Q GGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCC 210

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BLAST of Lsi02G011760 vs. ExPASy Swiss-Prot
Match: P49104 (Ras-related protein Rab-2-B OS=Zea mays OX=4577 GN=RAB2B PE=2 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 1.0e-108
Identity = 195/211 (92.42%), Postives = 201/211 (95.26%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDL+HRRAVS EEGEQFAKEHGLIFMEASAKTAQNVEEAF+KTA  IYKKIQDGVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 212
           ESYGIKVGY  IPG SGG   +++Q GGCCS
Sbjct: 181 ESYGIKVGY-AIPGQSGGAGSSSSQGGGCCS 210

[Close]

BLAST of Lsi02G011760 vs. ExPASy Swiss-Prot
Match: P49103 (Ras-related protein Rab-2-A OS=Zea mays OX=4577 GN=RAB2A PE=2 SV=2)

HSP 1 Score: 390.6 bits (1002), Expect = 1.1e-107
Identity = 195/211 (92.42%), Postives = 202/211 (95.73%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDL+HRRAVS EEGEQFAKEHGLIFMEASAKTAQNVEEAF+KTA  IYKKIQDGVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 212
           ESYGIKVGY  +PG SGG  G+++Q GGCCS
Sbjct: 181 ESYGIKVGY-VVPGQSGGA-GSSSQGGGCCS 209

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BLAST of Lsi02G011760 vs. ExPASy Swiss-Prot
Match: Q38922 (Ras-related protein RABB1b OS=Arabidopsis thaliana OX=3702 GN=RABB1B PE=2 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 2.2e-103
Identity = 182/210 (86.67%), Postives = 196/210 (93.33%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+T+D +PIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAFI+TAA I + IQDGVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           ES GIK+GYG   G +GGRDGT +Q GGCC
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCC 210

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BLAST of Lsi02G011760 vs. ExPASy Swiss-Prot
Match: P36863 (GTP-binding protein yptV4 OS=Volvox carteri OX=3067 GN=YPTV4 PE=3 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 5.1e-100
Identity = 184/213 (86.38%), Postives = 190/213 (89.20%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI ID K IKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDL HRRAV+TEEGEQFAKEHGLIF+E SA+TA NVEEAFI TA  IYKKIQDGVFDVSN
Sbjct: 121 CDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYG-GIPGPSGGR--DGTTAQSGGCC 211
           ESYGIKVGYG G  GP   +  +G   +S  CC
Sbjct: 181 ESYGIKVGYGAGNAGPQAAKPGEGDARKSSSCC 213

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BLAST of Lsi02G011760 vs. ExPASy TrEMBL
Match: A0A0A0LYF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172570 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.5e-115
Identity = 210/211 (99.53%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 212
           ESYGIKVGYGGIPGPSGGRDG TAQSGGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGATAQSGGCCS 211

[Close]

BLAST of Lsi02G011760 vs. ExPASy TrEMBL
Match: A0A1S3CLK8 (ras-related protein RABB1c OS=Cucumis melo OX=3656 GN=LOC103502211 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.5e-115
Identity = 210/211 (99.53%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 212
           ESYGIKVGYGGIPGPSGGRDG TAQSGGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGATAQSGGCCS 211

[Close]

BLAST of Lsi02G011760 vs. ExPASy TrEMBL
Match: A0A6J1CNK8 (ras-related protein RABB1c OS=Momordica charantia OX=3673 GN=LOC111012746 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.0e-114
Identity = 208/211 (98.58%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 212
           ESYGIKVGYGGIPGPSGGRDGT+AQ+GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGTSAQAGGCCS 211

[Close]

BLAST of Lsi02G011760 vs. ExPASy TrEMBL
Match: A0A218XLU8 (ras-related protein RABB1c OS=Punica granatum OX=22663 GN=LOC116208255 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.3e-114
Identity = 208/211 (98.58%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 212
           ESYGIKVGYGGIPGPSGGRDG T+QSGGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGATSQSGGCCS 211

[Close]

BLAST of Lsi02G011760 vs. ExPASy TrEMBL
Match: A0A6J1EL97 (ras-related protein RABB1c-like OS=Cucurbita moschata OX=3662 GN=LOC111434331 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.3e-114
Identity = 208/210 (99.05%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 41  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 100

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 101 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 160

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFI+TAATIYKKIQDGVFDVSN
Sbjct: 161 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 220

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC
Sbjct: 221 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 250

[Close]

BLAST of Lsi02G011760 vs. NCBI nr
Match: XP_038893942.1 (ras-related protein RABB1c isoform X2 [Benincasa hispida])

HSP 1 Score: 427.2 bits (1097), Expect = 8.4e-116
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 212
           ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 211

[Close]

BLAST of Lsi02G011760 vs. NCBI nr
Match: XP_004139512.1 (ras-related protein RABB1c [Cucumis sativus] >XP_008464283.1 PREDICTED: ras-related protein RABB1c [Cucumis melo] >KGN64986.1 hypothetical protein Csa_022843 [Cucumis sativus])

HSP 1 Score: 425.2 bits (1092), Expect = 3.2e-115
Identity = 210/211 (99.53%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 212
           ESYGIKVGYGGIPGPSGGRDG TAQSGGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGATAQSGGCCS 211

[Close]

BLAST of Lsi02G011760 vs. NCBI nr
Match: XP_022142692.1 (ras-related protein RABB1c [Momordica charantia])

HSP 1 Score: 422.5 bits (1085), Expect = 2.1e-114
Identity = 208/211 (98.58%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 212
           ESYGIKVGYGGIPGPSGGRDGT+AQ+GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGTSAQAGGCCS 211

[Close]

BLAST of Lsi02G011760 vs. NCBI nr
Match: KAG7019338.1 (Ras-related protein RABB1c, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 422.2 bits (1084), Expect = 2.7e-114
Identity = 208/210 (99.05%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFI+TAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 210

[Close]

BLAST of Lsi02G011760 vs. NCBI nr
Match: XP_022927533.1 (ras-related protein RABB1c-like [Cucurbita moschata] >KAG6583677.1 Ras-related protein RABB1c, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 422.2 bits (1084), Expect = 2.7e-114
Identity = 208/210 (99.05%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 41  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 100

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 101 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 160

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFI+TAATIYKKIQDGVFDVSN
Sbjct: 161 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 220

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC
Sbjct: 221 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 250

[Close]

BLAST of Lsi02G011760 vs. TAIR 10
Match: AT4G17170.1 (RAB GTPase homolog B1C )

HSP 1 Score: 421.4 bits (1082), Expect = 4.3e-118
Identity = 207/210 (98.57%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           ESYGIKVGYGGIPGPSGGRDG+T+Q GGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCC 210

[Close]

BLAST of Lsi02G011760 vs. TAIR 10
Match: AT4G35860.1 (GTP-binding 2 )

HSP 1 Score: 376.3 bits (965), Expect = 1.6e-104
Identity = 182/210 (86.67%), Postives = 196/210 (93.33%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+T+D +PIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAFI+TAA I + IQDGVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           ES GIK+GYG   G +GGRDGT +Q GGCC
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCC 210

[Close]

BLAST of Lsi02G011760 vs. TAIR 10
Match: AT4G17160.1 (RAB GTPase homolog B1A )

HSP 1 Score: 335.1 bits (858), Expect = 4.0e-92
Identity = 168/211 (79.62%), Postives = 183/211 (86.73%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAY FKYIIIGDTGVGKSCLLL+FTDKRFQ VHDLTIGVEFGA+ ITIDNKPIKLQIW
Sbjct: 1   MSYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRS+TRSYYRG AG LLVYDITRRETFNHLASWLE+ARQHA+ NMT MLIGNK
Sbjct: 61  DTAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDL  +R VSTEEGEQFA+EHGLIFMEASAKTA NVEEAF++TAATIYK+IQDGV D +N
Sbjct: 121 CDLEDKRTVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDGVVDEAN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQS-GGCC 211
           E        G  PGP GG+D +++Q   GCC
Sbjct: 181 EP-------GITPGPFGGKDASSSQQRRGCC 204

[Close]

BLAST of Lsi02G011760 vs. TAIR 10
Match: AT4G35860.2 (GTP-binding 2 )

HSP 1 Score: 283.5 bits (724), Expect = 1.4e-76
Identity = 137/164 (83.54%), Postives = 151/164 (92.07%), Query Frame = 0


Query: 47  MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 106
           M+T+D +PIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ
Sbjct: 1   MVTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60

Query: 107 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 166
           HAN NM+IMLIGNKCDLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAFI+TAA 
Sbjct: 61  HANPNMSIMLIGNKCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAK 120

Query: 167 IYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           I + IQDGVFDVSNES GIK+GYG   G +GGRDGT +Q GGCC
Sbjct: 121 ILQNIQDGVFDVSNESSGIKIGYGRTQGAAGGRDGTISQGGGCC 164

[Close]

BLAST of Lsi02G011760 vs. TAIR 10
Match: AT4G18430.1 (RAB GTPase homolog A1E )

HSP 1 Score: 196.1 bits (497), Expect = 2.9e-50
Identity = 103/210 (49.05%), Postives = 131/210 (62.38%), Query Frame = 0


Query: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
           Y YLFK ++IGD+GVGKS LL +FT   F      TIGVEF  R + +D K IK Q+WDT
Sbjct: 10  YDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDT 69

Query: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
           AGQE +R+IT +YYRGA GALLVYDITR  TF ++  WL++ R H +AN+ IML+GNK D
Sbjct: 70  AGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNKAD 129

Query: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
           L H RAV TEE   F++   + FME SA  A NVE+AF      IY+ +     D + + 
Sbjct: 130 LRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKALDGTGDP 189

Query: 183 YGIKVGYGGIPGPSGGRDGTTA-QSGGCCS 212
             +  G        G +D  TA +S GCCS
Sbjct: 190 MSLPKGQ---TIDIGNKDDVTAVKSSGCCS 216

The following BLAST results are available for this feature:

BLAST of Lsi02G011760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92963	6.0e-117	98.57	Ras-related protein RABB1c OS=Arabidopsis thaliana OX=3702 GN=RABB1C PE=1 SV=1	[more]
P49104	1.0e-108	92.42	Ras-related protein Rab-2-B OS=Zea mays OX=4577 GN=RAB2B PE=2 SV=1	[more]
P49103	1.1e-107	92.42	Ras-related protein Rab-2-A OS=Zea mays OX=4577 GN=RAB2A PE=2 SV=2	[more]
Q38922	2.2e-103	86.67	Ras-related protein RABB1b OS=Arabidopsis thaliana OX=3702 GN=RABB1B PE=2 SV=1	[more]
P36863	5.1e-100	86.38	GTP-binding protein yptV4 OS=Volvox carteri OX=3067 GN=YPTV4 PE=3 SV=1	[more]

BLAST of Lsi02G011760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYF8	1.5e-115	99.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172570 PE=4 SV=1	[more]
A0A1S3CLK8	1.5e-115	99.53	ras-related protein RABB1c OS=Cucumis melo OX=3656 GN=LOC103502211 PE=4 SV=1	[more]
A0A6J1CNK8	1.0e-114	98.58	ras-related protein RABB1c OS=Momordica charantia OX=3673 GN=LOC111012746 PE=4 S...	[more]
A0A218XLU8	1.3e-114	98.58	ras-related protein RABB1c OS=Punica granatum OX=22663 GN=LOC116208255 PE=4 SV=1	[more]
A0A6J1EL97	1.3e-114	99.05	ras-related protein RABB1c-like OS=Cucurbita moschata OX=3662 GN=LOC111434331 PE...	[more]

BLAST of Lsi02G011760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893942.1	8.4e-116	100.00	ras-related protein RABB1c isoform X2 [Benincasa hispida]	[more]
XP_004139512.1	3.2e-115	99.53	ras-related protein RABB1c [Cucumis sativus] >XP_008464283.1 PREDICTED: ras-rela...	[more]
XP_022142692.1	2.1e-114	98.58	ras-related protein RABB1c [Momordica charantia]	[more]
KAG7019338.1	2.7e-114	99.05	Ras-related protein RABB1c, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022927533.1	2.7e-114	99.05	ras-related protein RABB1c-like [Cucurbita moschata] >KAG6583677.1 Ras-related p...	[more]

BLAST of Lsi02G011760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17170.1	4.3e-118	98.57	RAB GTPase homolog B1C	[more]
AT4G35860.1	1.6e-104	86.67	GTP-binding 2	[more]
AT4G17160.1	4.0e-92	79.62	RAB GTPase homolog B1A	[more]
AT4G35860.2	1.4e-76	83.54	GTP-binding 2	[more]
AT4G18430.1	2.9e-50	49.05	RAB GTPase homolog A1E	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 48..70 score: 53.53 coord: 7..28 score: 51.86 coord: 110..123 score: 49.81 coord: 145..167 score: 44.01 coord: 30..46 score: 32.76
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 7..170 e-value: 4.1E-107 score: 371.8
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 12..211 e-value: 4.0E-5 score: 23.7
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 4..170 e-value: 7.3E-38 score: 141.8
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..211
None	No IPR available	PANTHER	PTHR47979:SF64	SUBFAMILY NOT NAMED	coord: 1..211
None	No IPR available	PROSITE	PS51420	RHO	coord: 1..168 score: 9.684298
None	No IPR available	PROSITE	PS51419	RAB	coord: 2..210 score: 36.251606
None	No IPR available	CDD	cd01866	Rab2	coord: 3..170 e-value: 7.61918E-132 score: 365.592
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 9..170 e-value: 6.2E-12 score: 33.1
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 8..168 e-value: 8.2E-63 score: 210.8
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..211 score: 19.60261
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..182 e-value: 1.2E-71 score: 242.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..179
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 7..160 e-value: 3.9E-33 score: 112.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G011760.1	Lsi02G011760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0015031	protein transport
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding