Lsi02G011530 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi02G011530
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionKrueppel-like factor
Locationchr02: 13799762 .. 13809095 (-)
RNA-Seq ExpressionLsi02G011530
SyntenyLsi02G011530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTCCGTATTTAATTTAGATCTAAAAAGATTGTTTTTATATTTAATTCAGATCTGAAACGTTTTTAGTATTTAATTCAGATCTAAAACGTTTTTTTATGATTATTTAAAGATCGAAAAACATGTTTGAAAAGAGGGATTTTGATACTTTTCTTTTCCGGAATCTGAGCATAATTTCCTATTGATTCCAATCCTTCTCCGATGAGTATATGTCTGAGAAGGGTGTTGTGTTAACCTTGGGGAGCAATCGGCAAAAAACGATTTAGCACCGTGGTCGTGCCGCAATTTGTTTTCAAGGCAGTGGATTTTCCACGGCATAACAACAATCGACATTTGATTCCAACAATTTGGAAGCAAATTGATTATAAGTAATGATATTTACAAGTCGATTCATTTCATTTTTGATACCTCTTGTAAGTTGTAAGTTGAAAGTAAGCAGATTCATTTTTGGAGCCCAATATTTATTGGGCATGGGACTTTAAATCTGTGACCAAAAATTGAGATATTGCTCTTGCGGAGGTTGAAAAGGAGAAAAGGTTCTCCTTCATCAAGGCTTGGGAAGATAGTAAAAAAAAAACTAAAGGGTGAGAACAAGAATTTTTTTTTTTTTTTTTTGAGAAATTGAGGTCAATGAAGCAGAATGAAGAAATTGGGAAGTTTGAAGTCGGAAACCAAAATGGTGAAGCATAGAAGGCAGGGAGAAAGATTCAGATGAAGATTTTCCAATTTATGGTGGCTAAAGTCCAAGAATTATTTAAGGCTCGGATTGGATCGGTCAATCTGTGATCGATTTGGTTATGCGTTTTGTGTCTATTCAACAATGGAGGAAGAGGTATGAAATAAGGTAATTTCTTTTGAGAGAAATTAATTACTGACTTATTGGTGTGCTTTATTCTTGATGAACGAATGAATGATTTGTCTGGGAAATTTTGTTAGAGAGATTATATTTTGATTATTTATTTTGAGATTATTGATGAATGATCTAAAATTACGAGAGATTCTCATTCCAAATTGAGAATTTAAATTTAATAAGGATAAAGTAGATTTTAGGTAAAACAAATTAAGAAAATAATGAGCCAAATAAATTATCATAGGTGTTGGTGTTTTCTTGATTTGATTCAAATTTTGATCCAAATCCAAATTCAACTTTCACATATGTTGAAGATATTTTGATTGGTTAAAAAATTGGATCAAACGTGATAGAGACTTCTTGAACTCTACTTAGACATTTTTGACGTACAATTACAATAACCAAAGAATTTTTCCATATGTGACCAATTGTTTACAAGCATTAAAAAAAAAAAAAAAAAAAAAACTTGAAAGAGATTTAATTCTTTGGGGTGGTTTTCCTTATAAATAGTATATTATGGAAATCATTCATTTAGTCATTTGTGAATGTGAATAAGGAAACACATGAAGTCATAAAGTTTTTGTCATTCTCGTTGTCATTGTACCAATTAGTTGTTGTTTGATTTTAGCTTGATGTATCATTTTCTTATCATAAAAATCATAAGCAATTTTCATAAGGAAACAAGCATGGTGTTTCAATTTTGGAGTAAAATTAATTTTAAATATATTCTGCACTTAATTTCAAAATAATTTTTTAACATAATTTGAAAAATTTGGAGAGACAACTCAACATATTGAGTTTACAACTTTTTGATTGGTGGATTGATTTATGTTAATTATCATGTGTGCATGTGATAGTTTGTGTGGTGGATCTTGTGGTTATTGATCATCAAATATAGTGACTTTTAAGTGAAGATATTTTGATTGTTCCACAAATGCCTCCAACTTTTAAATTTTTAAACTATTGTCAATTTGGATGATGATGACAAAGATTTTCTTGATGTGATTCGAATCTTGATAGAAATCAAAGTTCAATTTTCAAATCTATTGAAGATATTTTGGTTCGTAATTTTCTTTGAATAGCTCAAATGAGATGCTATTGTGATCAATTTAAGCAAGTTTAATTATCACATTAGCATGGCTGGAAATAATACTACATGTGCTATACTTGACATAGTTTATGTATGATTTAATGGTTATGTTTGGCCATTAAATTTCATGAAGTTGAAAAGTATTATTATTACTTTTAAATTGAGTTTTGTCCTATAACATTATTTTGACTGTTAGCTTGTTTGTAGTATAAAAATATGTAAATTTCATCATATTTATGTGAAAGCTTTATAGAATTGATGGTAATTTGAGATGTTGTCTAAGCTATAAAATATGTGGATATTTTATAAGGACTTTTCATGGATATATAAGTTAGAACAACTATCTCCATTCGTATGAGACTTTTTGGGGTCAAAAGTAAAGCCATGAGGGCTTATATGTCCAAAGTAGATACAATATCATACTATTGTGAAGATGTAGTGTCCCTAGTTTAGCAATGTTGATATAATCCTTAGGTGTTGAACAAAGATGTAGTGGAACCTCAAAAGTAGTCGTGGTGTAATCTATGGTTGAACTCTATCAGATAGACAGTATGCTCTGGTGAAAAAGAGTTAGCCTAGATAAGAGTTAGATGAATGGATGACTACTTTAGGAGAGGCTCAGTTGGTCTTTTGTTCGAGGGGAGGATTGTTGAGAATAGGACCAAAGTACCACATTGGTTAGATAAGATCATGGATACATGGGTGTACATATATATAATTTCAATTGATTGAAAGTATAAAGTCTTTATTTTATTGAGCATGTCTAGCATCATGAAAAGAGAAAATGTATTAGCTATTGAGTAGCTTATGAAGAGACATATTGAAATAAATCAATTAGGTGTATGTAAATAAGACATCAAATATTATGAGGCATACTTTCGTATGACTAAAATAGCTACCATATAGTCTTGATAGTATTTGTAGCAATATGTGACCGTCTAGTACATCAGATCGATACAAAGATAGCATTCCTCCATAGTGACTTGGAAGAAGAAATGTATATGTGACACCACCTAAAGGTACATAAATTCACACAATCTCTATACGGTTTTAAAGTACACTGTTGTGATACATGTATTTACTCAAAGTTGTTTGGAGCTGATTGTATGATTATTTGTTTGTATATTGACGATATACTGATTTTTTATACAAACATAGATGTAAGTAACAATACTAAGTTATTTATGTCCTCACATTTTGAAATGAAAGATTTATGTGAGGATAATGTGATACTTGGTGTTAAGATAAGAAAAACTGAAAATGGAAATCAATCACACATTGAAAATTGCTAAAGAGATTCGATTGTTTTAATGAAGCTTCTGTAAGAACACCTTATGATACTAGTATGAGTCTTAAGAAAAATAAGGAAAATGGTGTTTCTCGATCTCAATATGCAAAGATTATAGGAAGTGTTATGTTTTTATGAACTATACTAGACCTATGATTACATATGTTGTGAGGAGATTGAGTAGATATACACATAATCCTGATAAAGATCATTTGATTGTCCTTCGTTATTTATTAAGGTATTTTAAGGGTACAATATTTTATTATTTGCATTTTAATATTTTTTCTGCCACACTAGAAGGGTAGTGTATGCAAACTGGGTAACTTAGAATGACGAAGTAAACTTTACTAGTGGATGTGTTCTTATTGGGTAGAGGAGCTATTTCATGGAAGTCTGCAAAACAGACTTGTATAGCAAGGTCCACCATTGAGTCTGAATTTATTGATCTAGAATTAGCAGGAGAGGCTGAGTGGCTTAGAAGCCTACTGGGAGATGCACCATTGTGGGAGGCATCAATATGAGTGGCTTAGAAGCCTATTGAGAGAAGTACCATTGTGAGAGGCATTAGTACCAGTCTCTTTACGCTGTGATTCACAGGCTGCCATAGGAATTGTCAAGAATAGTGTGTATGATGGCAAGAAAAGGCATATACGCCTTAGACATGAAGTTGTGAAACAGTTACAGAAATGGGGATTATTTCATTGTAAGATTTCAAAGGAATTTAGCAGATCCTCTCACTAAACCATTATAGTGGTCCATAGCCCTTTATTTGGATGGTCTATTGCGATAGACTTGATGGTCCATAGTCCTTTATCTGAGTGGTCTATTGCGATAGACTTGATGGTCCATAGCCTTTCATTTGGGTGGTCCTACTACGAACTTGATGGACAGAACTAAAACCTTTAAAAATTTCATAGCCCTTCTTTTAGGTGGTCTTGGTATGGACTTGATGGATAATTATAAAATCTTCATAGCTTAGTTTTGAGTGGTTTGTCTTTGACAGACTTGATGAAGTTGGTCTTGATATGGACTAGATGTGAAGTCTTCATAGCTCAGTTTTTGAGTGGTCTATTGCAATAAACTTGATGAAGCAACTAACGTGATTGTGAAGGTGTGGTCACCTTTTATGAAAAAGTTTAAGGGCCTTTTTCTAGAGCTTTCACGGTGACCCGAGGTTTTTGTGCATGACCTTAAATAGCACGTATTGTATCGCGGAATCAAGGAAATTTAAGGAGTAAAACGTGTTGTGGGGGTCTCAACTGTAGTTATTGAAAGTTCAAGAGGTAACTCACTTTCTCTAATAAAGTTGTTGCGCTACTTCACTATGCATCAATTCAAATCGAAAGATATTGATATTTAAGTTTATTCTACTTTGTTTGCTCAGATAAATTGTTATTATTATTATTATTATTAATTGCCAGTCATTCATGGGGGATTGTTGGGAATGACTAGTCAATTGTTGGAATGACTTGTCATAAAAGTTATATTTTTGCTTTTATTCCACATTGAAAAATTTATAAGTGTTTAATCCCCAAGATTTAAAAAAAATGTATTTCTTCATTTAATTTAGTTTTGAAACGTTTTCCATATTTAATTTAGATCTAAAAAGATTGTTTTTATATTTAATTCAGATCTGAAACGTTTTTAGTATTTAATTCAGATCTAAAACGTTTTTTTATGATTATTTAAAGATTGGAAAACATGTTTGAAAAGAGGGATTTTGATACTTTTCTTTTCCTGAATCTGAGCATAATTTCCTATTGATTCCAATCCTTCTCCGATGAGTGCACGTCTGAGAAGGGTGTTGTGTTAACTTTGGGGAGCAATCGGCAAAAAACGATTTAGTACCGTGGTCGTGCCGCAATTTGCTTTTAAGGCAGTGAATTTTCCACGGCACAACAACAATCGACATTTGATTCTAACAACTTTTACATCAATGTTGTGGGACTGAATTGTTAATTTAGTGTTCTGTTTTTAGGAATTAGTTTAGGGATTTCGTAGTGGAAGAAGAAATTTGTGGGTAATTGGATTTTGTTTGAAGTAAGGGATCTTACTGTTGGAATGCCTAATCGCAAATTTGGGTATTATTGTATATTACTATATGACTTCTTAAAATTGTCATGTATCATGGATGCCATGAATCTAAATGCAAAGGTTCATGAGTGTTGTTCATGGACTAAAGTGACTGAGACATGAGTTGATTTATGAAAGTCATGAATGCCATGTTATGTGGGTTATAATTGTGAAATTGGATGTGAATCTATTATGTACTGCACATTATGAGATTGACTTTCTATGTGGGACTTCATGCATGTGTGAATGTTCACTAAAGCTATGGAAATGATGAATGATTCGCTCCTTTTCCACCATGATTTTATTTGCACGAAAAAGGTGCATATTCAGGACTCTGGTATATGAACTTGACGTAACATGGTGGGTATGTATGAAAGTGATGCTTACTCAGAAAGGCTTGAGGTGTATGAATGCACGCCCAGTGGATTCTGTGTGCATGAAAAAGATGTGTACAGAACTACGTGCACAAAAGATGTGCACATCTAGACTTAGAAGGAGGAGTGGAAATCAAGAAGAAACGTTTGAGTCTCACTAAAGATTAACCTGCATGTTGACTATGTATGTACATGTCCCGATCCCAACGGTGGGGCCTCATACGGAGTATTTTAATATTTGTCCTTTTCAAAATCTTCTTTTCATGAGCGTACTAGATGCGTGACAAGGTGGTCTATTGGCTGTACCATGGGACTAAGTTATCTTGTTCTTCATTTAGTCACATCTTTGAATTTGTTTAGATGCATATATTAAAATCCAGATTTGATACTTTTGCTTTTCCCATTCAAACCATTTCTTTATTTGTTTTTATAGGGATCCCGATGGAAACCTATGTTCTTATTTTATTTATTTATTTATTTATTTTATTTATTTTATTTTTTGATATCTTAACATTTAGTTAAAAGTGGTTTAGGTATGTTTTTCTGCTATTTCTTTTTAAAGTGAAGTTAAATTTACACTTATAGTTTCGTTATAAAAGTTATGCATGTAGTGACCCAAGATTAAAGTTATGAAAAGCCAGGTTGTTACAATTTTAAATGGAAAACTTATTGATTTCAAATCCTTATGGATTTTAAATTCTATTTTCTTTATTAATTACAAACGCAGGAAATGATTTTGATCTGAAATCCTTTCAAATCCGGTGGTTTCAAGGAGAGGGTTATTCTTTTTGTTTTTAGGTTGAAGGACATAAAAATTGAGTTAGAGGCAACCTAGAGATAGCTATGGGAGAAGAGCAAAAAGACCCTTTCAAGGGAGTGGACTGGAAAGCCGTTGGTGGGGATATGCAGAAAGATCCCAGCTCTACAAACATTATAAAGAAAAGGCGTCCAACAAAAATTAGGCAAATTCCAGATTATTATTTTCTTCCTAGAAGATCCCTTCCTTCTGCCATTGCATTCTATGGGGCTTGTATTGCAGGTGGAATTGGTGCTGGTATGCTGGTGGAGATCTGGATAAATGATAAAGTTAAAAGTAAGTTCTGAATATGGATCTAAGTGCAGGTTTTGTAATATTCAAAATCATGTCCAAACATGCCTTAAACATGATTTTAATAACCATCAACATTTATGAAAGATTAAAGGCATGTTTAGTAGTGATTTTAACTATTTTGAGTAGTTTTCATATTCCTAGCAATATCTTTTCGATCTCTGTGGTTTTCTTTTTAATGTACTGTCTATGAGAGATGAGTCAGTGTGATTGATTATTAATTTTCCTTTTTAATGTGTTCTTACAGAGGATGGAGGTGTCATTTGGGAGTTTGACAAGTAGAGTACAAGAGAAGTAGAACAGAACAAGATCATCAAGTTGCTGGGTTTTGTTTTATTGTCAATCCTAGTTTTGGCACACACAAGTGAGAACATCTTTTAATGCCTCTATGAAGTTGTACAAAAGTTGAAAGCATTTTTTTTTTTCTTTTTTGAAGTTATAACCTCCGATTCAGCTATTGGTTGTTTGTTTCTCTAATTATAGATCAAGCACAACTAACATTAAATGCAATCATTTTTCTGTACAAACCTTGCACAGATTGTTGCTTTGCCCTGCTAAAGCTGGGTTTATTGAATTTATAAACCTTGCACAACTGACATTAAAATTTCTCTAAAATTTCTATTATTCTTCTGCAGCTACAATCCTCATAAAACAACACAAGAACAGGCCTTTTACAAGACTCTTCCCTTATCACAAAAGTGAGAATTCGTTGGGATCTCTTCCATCATTGAAGGTCAGTCTCTCTTACAAATTTAAAACACATATTCTCTGATATTGAGGTTGATAGTATAAATTTAAAACTTTGAGAAATAAAGAGAGATTTCTTCAGCAGTCACATCACATGTATGAAGCCAATCTCACCTTGGTGCACTTTGGCTCAACATACAGACCTAAATCTCTGATGACAACCCACTTTGAAGGCTTCAAGGGTTTTGAACTCCAAATATAAATAAAGTTTGGGCCTGAAATAGGTAAACATAATGTAGTGAGTTTAATTTGAAGAAGATGAAACCAGCTTCCAAAGAAAGAGGAATAATAATCCAAATTTCAATCCAAACATTATGAGAGGATCAAAGGCATATATTGTGAAACTATTCAAAGGGGTCTGGAGATTGGAAGAATAATCTAAATAGGAAAAAAGGGAAAGAAAGCATAGCATATATTAGGACACAAAATTGAAGTCTTAAGTCAAAGGGCTTGTGCTTTACCACTCATAGTGCTCATCAACAACAACATATATATATATATATATATATATATATACAAACTTTCATTTGAAGCCCAAAAAAAACAAAGTGAGAATCCCCATTTGACAAGCAGTGGATTCTGAACCTAACACATACTGAATGGAGATAGAGATAGAAGAGAGGCCACACTTTCACTTGTTTGCTGGTCCAACTGGATAAGACAATTCCTTATTTCACTCACTCTCAAGATGCCTTAATTCCTCTATTATTCACCAACTTTTTCTACAACATCACAAACACTGCTCAGCTCTCATAATTGTCTTATTATGTAAATATGTGGTTCATCCAAACAAGTCAACACACTAATAAGTCTTGGTCTATGTCTCAAGTAATTCAATATCCTACAATATTGGTCATACTACAAGAAACTTTGGCTTGCGTCAGCCTAAATTAAGTTGCATAATGAGAAATGGTCTTACCTCAGGTAAGTGATATTGTACTTAGGGGCCAAGTTAGGAAAGGAGGTTGAACTTTGGCTCAAATAAATTCACGACTAACAAATTATTGAGTAAAAAATTATTTTTATCATAATCTTAAGATGAAAATGTAATTAATTTAATTTGAATTTTTGGATTCTTCAACATTATAAAATTCTCCATCTTTGAATTTGGCATCAAAATCATTTTGATTTGTTTTACCGGTCTTCTCCTTCACAAATTACAAATTTACTATTGCTGTCACGTAAATGTCATGTGTGTTTTTATCTGCCCGATGATTTTGGCATTATTAACCATTATAATTCAACTTATTGTGATACATAAACTAAAAATAAAAAGTAAGATAAAAGTTGGTAGAGTATCTAAGGGCACGTTTGAGGATGATTTTAAAATGGCTAAAATTACTCTTGTCATTTTCAAAATCATGGTGAAACATGTTTTTAATCCTTCAAATCTAATTTTGATGATTGAAAATTGCATTTAAAAGTGTAAAATTGAAAACTAATTTAAATTTGAAAACTAAAAATTAATTTTGAGGGTGTGTTTTTGAGTGATTTTAAAAAATAGCAAAAGTGATTTTGACAATCTTAAAATCGCTCTCAAACATGTCCTAATTTCTTGCGGTTGAAGGCAAAAAAGCCATTTTGTGGGACAGGTTACCCACAAATTCACATGCATGCGCCCTTCAACTTATGAGCTTTTAAGGACACACAAAGGTCTTATAATGCTGAAAACTGATAATCCCATAATCACTTAGTACCACCTCTCTCTCATCATATAACCTTAGAAAGAAGGCTTCAATTTTGCAACCATATGTCTAAGAGGACCACAAGAGCAATGGCTAACAACTTCAATGATCATAGCGTTG

mRNA sequence

TTTTCCGTATTTAATTTAGATCTAAAAAGATTGTTTTTATATTTAATTCAGATCTGAAACGTTTTTAGTATTTAATTCAGATCTAAAACGTTTTTTTATGATTATTTAAAGATCGAAAAACATGTTTGAAAAGAGGGATTTTGATACTTTTCTTTTCCGGAATCTGAGCATAATTTCCTATTGATTCCAATCCTTCTCCGATGAGTATATGTCTGAGAAGGGTGTTGTGTTAACCTTGGGGAGCAATCGGCAAAAAACGATTTAGCACCGTGGTCGTGCCGCAATTTGTTTTCAAGGCAGTGGATTTTCCACGGCATAACAACAATCGACATTTGATTCCAACAATTTGGAAGCAAATTGATTATAAGTAATGATATTTACAAGTCGATTCATTTCATTTTTGATACCTCTTGTAAGTTGTAAGTTGAAAGTAAGCAGATTCATTTTTGGAGCCCAATATTTATTGGGCATGGGACTTTAAATCTGTGACCAAAAATTGAGATATTGCTCTTGCGGAGGTTGAAAAGGAGAAAAGGTTCTCCTTCATCAAGGCTTGGGAAGATAGTAAAAAAAAAACTAAAGGGTGAGAACAAGAATTTTTTTTTTTTTTTTTTGAGAAATTGAGGTCAATGAAGCAGAATGAAGAAATTGGGAAGTTTGAAGTCGGAAACCAAAATGGTGAAGCATAGAAGGCAGGGAGAAAGATTCAGATGAAGATTTTCCAATTTATGGTGGCTAAAGTCCAAGAATTATTTAAGGCTCGGATTGGATCGGTCAATCTGTGATCGATTTGGTTATGCGTTTTGTGTCTATTCAACAATGGAGGAAGAGGTATGAAATAAGGAAATGATTTTGATCTGAAATCCTTTCAAATCCGGTGGTTTCAAGGAGAGGGTTATTCTTTTTGTTTTTAGGTTGAAGGACATAAAAATTGAGTTAGAGGCAACCTAGAGATAGCTATGGGAGAAGAGCAAAAAGACCCTTTCAAGGGAGTGGACTGGAAAGCCGTTGGTGGGGATATGCAGAAAGATCCCAGCTCTACAAACATTATAAAGAAAAGGCGTCCAACAAAAATTAGGCAAATTCCAGATTATTATTTTCTTCCTAGAAGATCCCTTCCTTCTGCCATTGCATTCTATGGGGCTTGTATTGCAGGTGGAATTGGTGCTGGTATGCTGGTGGAGATCTGGATAAATGATAAAGTTAAAAAGGATGGAGGTGTCATTTGGGAGTTTGACAAGTAGAGTACAAGAGAAGTAGAACAGAACAAGATCATCAAGTTGCTGGGTTTTGTTTTATTGTCAATCCTAGTTTTGGCACACACAACTACAATCCTCATAAAACAACACAAGAACAGGCCTTTTACAAGACTCTTCCCTTATCACAAAAGTGAGAATTCGTTGGGATCTCTTCCATCATTGAAGTCACATCACATGTATGAAGCCAATCTCACCTTGGTGCACTTTGGCTCAACATACAGACCTAAATCTCTGATGACAACCCACTTTGAAGGCTTCAAGGGTTTTGAACTCCAAATATAAATAAAGTTTGGGCCTGAAATAGGTAAACATAATGTAGTGAGTTTAATTTGAAGAAGATGAAACCAGCTTCCAAAGAAAGAGGAATAATAATCCAAATTTCAATCCAAACATTATGAGAGGATCAAAGGCATATATTGTGAAACTATTCAAAGGGGTCTGGAGATTGGAAGAATAATCTAAATAGGAAAAAAGGGAAAGAAAGCATAGCATATATTAGGACACAAAATTGAAGTCTTAAGTCAAAGGGCTTGTGCTTTACCACTCATAGTGCTCATCAACAACAACATATATATATATATATATATATATATATACAAACTTTCATTTGAAGCCCAAAAAAAACAAAGTGAGAATCCCCATTTGACAAGCAGTGGATTCTGAACCTAACACATACTGAATGGAGATAGAGATAGAAGAGAGGCCACACTTTCACTTGTTTGCTGGTCCAACTGGATAAGACAATTCCTTATTTCACTCACTCTCAAGATGCCTTAATTCCTCTATTATTCACCAACTTTTTCTACAACATCACAAACACTGCTCAGCTCTCATAATTGTCTTATTATGTAAATATGTGGTTCATCCAAACAAGTCAACACACTAATAAGTCTTGGTCTATGTCTCAAGTAATTCAATATCCTACAATATTGGTCATACTACAAGAAACTTTGGCTTGCGTCAGCCTAAATTAAGTTGCATAATGAGAAATGGTCTTACCTCAGGTAAGTGATATTGTACTTAGGGGCCAAGTTAGGAAAGGAGGTTGAACTTTGGCTCAAATAAATTCACGACTAACAAATTATTGAGTAAAAAATTATTTTTATCATAATCTTAAGATGAAAATGTAATTAATTTAATTTGAATTTTTGGATTCTTCAACATTATAAAATTCTCCATCTTTGAATTTGGCATCAAAATCATTTTGATTTGTTTTACCGGTCTTCTCCTTCACAAATTACAAATTTACTATTGCTGTCACGTAAATGTCATGTGTGTTTTTATCTGCCCGATGATTTTGGCATTATTAACCATTATAATTCAACTTATTGTGATACATAAACTAAAAATAAAAAGTAAGATAAAAGTTGGTAGAGTATCTAAGGGCACGTTTGAGGATGATTTTAAAATGGCTAAAATTACTCTTGTCATTTTCAAAATCATGGTGAAACATGTTTTTAATCCTTCAAATCTAATTTTGATGATTGAAAATTGCATTTAAAAGTGTAAAATTGAAAACTAATTTAAATTTGAAAACTAAAAATTAATTTTGAGGGTGTGTTTTTGAGTGATTTTAAAAAATAGCAAAAGTGATTTTGACAATCTTAAAATCGCTCTCAAACATGTCCTAATTTCTTGCGGTTGAAGGCAAAAAAGCCATTTTGTGGGACAGGTTACCCACAAATTCACATGCATGCGCCCTTCAACTTATGAGCTTTTAAGGACACACAAAGGTCTTATAATGCTGAAAACTGATAATCCCATAATCACTTAGTACCACCTCTCTCTCATCATATAACCTTAGAAAGAAGGCTTCAATTTTGCAACCATATGTCTAAGAGGACCACAAGAGCAATGGCTAACAACTTCAATGATCATAGCGTTG

Coding sequence (CDS)

ATGGGAGAAGAGCAAAAAGACCCTTTCAAGGGAGTGGACTGGAAAGCCGTTGGTGGGGATATGCAGAAAGATCCCAGCTCTACAAACATTATAAAGAAAAGGCGTCCAACAAAAATTAGGCAAATTCCAGATTATTATTTTCTTCCTAGAAGATCCCTTCCTTCTGCCATTGCATTCTATGGGGCTTGTATTGCAGGTGGAATTGGTGCTGGTATGCTGGTGGAGATCTGGATAAATGATAAAGTTAAAAAGGATGGAGGTGTCATTTGGGAGTTTGACAAGTAG

Protein sequence

MGEEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK
Homology
[Close]
BLAST of Lsi02G011530 vs. ExPASy TrEMBL
Match: A0A0A0L8I7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119440 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.4e-44
Identity = 88/93 (94.62%), Postives = 90/93 (96.77%), Query Frame = 0 

Query: 2   GEEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYG 61
           G EQKDP KGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPS +AFYG
Sbjct: 11  GVEQKDPLKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSVMAFYG 70

Query: 62  ACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
           ACIAGGIGAGMLVEIWINDK+KKDGGVIWEFDK
Sbjct: 71  ACIAGGIGAGMLVEIWINDKIKKDGGVIWEFDK 103

[Close]
BLAST of Lsi02G011530 vs. ExPASy TrEMBL
Match: A0A5D3DB39 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00890 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.2e-43
Identity = 86/93 (92.47%), Postives = 89/93 (95.70%), Query Frame = 0 

Query: 2   GEEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYG 61
           G EQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR LP  +AFYG
Sbjct: 11  GVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYG 70

Query: 62  ACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
           ACIAGGIGAGMLVE+WINDK+KKDGGVIWEFDK
Sbjct: 71  ACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 103

[Close]
BLAST of Lsi02G011530 vs. ExPASy TrEMBL
Match: A0A1S3AV52 (uncharacterized protein LOC103483172 OS=Cucumis melo OX=3656 GN=LOC103483172 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.2e-43
Identity = 86/93 (92.47%), Postives = 89/93 (95.70%), Query Frame = 0 

Query: 2   GEEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYG 61
           G EQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR LP  +AFYG
Sbjct: 11  GVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYG 70

Query: 62  ACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
           ACIAGGIGAGMLVE+WINDK+KKDGGVIWEFDK
Sbjct: 71  ACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 103

[Close]
BLAST of Lsi02G011530 vs. ExPASy TrEMBL
Match: A0A6J1FVE8 (uncharacterized protein LOC111447184 OS=Cucurbita moschata OX=3662 GN=LOC111447184 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.7e-43
Identity = 84/94 (89.36%), Postives = 89/94 (94.68%), Query Frame = 0 

Query: 1  MGEEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFY 60
          M EE KDPFKGVDWKAVGGDMQKDPSS NI+KKRRPTK+RQIP+YYFLPRRSLPS +AFY
Sbjct: 1  MAEEAKDPFKGVDWKAVGGDMQKDPSSINILKKRRPTKVRQIPEYYFLPRRSLPSVLAFY 60

Query: 61 GACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
          GACIAGGIGAGMLVEIWI DKVKKDGGV+WEFDK
Sbjct: 61 GACIAGGIGAGMLVEIWIKDKVKKDGGVVWEFDK 94

[Close]
BLAST of Lsi02G011530 vs. ExPASy TrEMBL
Match: A0A6J1IJJ2 (uncharacterized protein LOC111475080 OS=Cucurbita maxima OX=3661 GN=LOC111475080 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.3e-42
Identity = 83/94 (88.30%), Postives = 88/94 (93.62%), Query Frame = 0 

Query: 1  MGEEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFY 60
          M EE KDPFKGVDWKAVGGDMQKDPSS NI+KKRRPTK+RQIP+YYFLPRRSL S +AFY
Sbjct: 1  MAEEAKDPFKGVDWKAVGGDMQKDPSSINILKKRRPTKVRQIPEYYFLPRRSLSSVLAFY 60

Query: 61 GACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
          GACIAGGIGAGMLVEIWI DKVKKDGGV+WEFDK
Sbjct: 61 GACIAGGIGAGMLVEIWIKDKVKKDGGVVWEFDK 94

[Close]
BLAST of Lsi02G011530 vs. NCBI nr
Match: XP_004133805.1 (uncharacterized protein LOC101207877 [Cucumis sativus] >KGN56411.1 hypothetical protein Csa_009724 [Cucumis sativus])

HSP 1 Score: 188.3 bits (477), Expect = 2.9e-44
Identity = 88/93 (94.62%), Postives = 90/93 (96.77%), Query Frame = 0 

Query: 2   GEEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYG 61
           G EQKDP KGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPS +AFYG
Sbjct: 11  GVEQKDPLKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSVMAFYG 70

Query: 62  ACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
           ACIAGGIGAGMLVEIWINDK+KKDGGVIWEFDK
Sbjct: 71  ACIAGGIGAGMLVEIWINDKIKKDGGVIWEFDK 103

[Close]
BLAST of Lsi02G011530 vs. NCBI nr
Match: XP_023522177.1 (uncharacterized protein LOC111786056 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 186.4 bits (472), Expect = 1.1e-43
Identity = 85/94 (90.43%), Postives = 90/94 (95.74%), Query Frame = 0 

Query: 1  MGEEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFY 60
          M EE KDPFKGVDWKAVGGDMQKDPSS NI+KKRRPTK+RQIP+YYFLPRRSLPS +AFY
Sbjct: 1  MAEEAKDPFKGVDWKAVGGDMQKDPSSINILKKRRPTKVRQIPEYYFLPRRSLPSVLAFY 60

Query: 61 GACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
          GACIAGGIGAGMLVEIWINDKVKKDGGV+WEFDK
Sbjct: 61 GACIAGGIGAGMLVEIWINDKVKKDGGVVWEFDK 94

[Close]
BLAST of Lsi02G011530 vs. NCBI nr
Match: XP_008437869.1 (PREDICTED: uncharacterized protein LOC103483172 [Cucumis melo] >KAA0048876.1 uncharacterized protein E6C27_scaffold171G00910 [Cucumis melo var. makuwa] >TYK20827.1 uncharacterized protein E5676_scaffold291G00890 [Cucumis melo var. makuwa])

HSP 1 Score: 185.3 bits (469), Expect = 2.5e-43
Identity = 86/93 (92.47%), Postives = 89/93 (95.70%), Query Frame = 0 

Query: 2   GEEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYG 61
           G EQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR LP  +AFYG
Sbjct: 11  GVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYG 70

Query: 62  ACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
           ACIAGGIGAGMLVE+WINDK+KKDGGVIWEFDK
Sbjct: 71  ACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 103

[Close]
BLAST of Lsi02G011530 vs. NCBI nr
Match: XP_022942020.1 (uncharacterized protein LOC111447184 [Cucurbita moschata] >KAG6597065.1 hypothetical protein SDJN03_10245, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028536.1 hypothetical protein SDJN02_09717 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 184.1 bits (466), Expect = 5.5e-43
Identity = 84/94 (89.36%), Postives = 89/94 (94.68%), Query Frame = 0 

Query: 1  MGEEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFY 60
          M EE KDPFKGVDWKAVGGDMQKDPSS NI+KKRRPTK+RQIP+YYFLPRRSLPS +AFY
Sbjct: 1  MAEEAKDPFKGVDWKAVGGDMQKDPSSINILKKRRPTKVRQIPEYYFLPRRSLPSVLAFY 60

Query: 61 GACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
          GACIAGGIGAGMLVEIWI DKVKKDGGV+WEFDK
Sbjct: 61 GACIAGGIGAGMLVEIWIKDKVKKDGGVVWEFDK 94

[Close]
BLAST of Lsi02G011530 vs. NCBI nr
Match: XP_022975548.1 (uncharacterized protein LOC111475080 [Cucurbita maxima])

HSP 1 Score: 181.0 bits (458), Expect = 4.7e-42
Identity = 83/94 (88.30%), Postives = 88/94 (93.62%), Query Frame = 0 

Query: 1  MGEEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFY 60
          M EE KDPFKGVDWKAVGGDMQKDPSS NI+KKRRPTK+RQIP+YYFLPRRSL S +AFY
Sbjct: 1  MAEEAKDPFKGVDWKAVGGDMQKDPSSINILKKRRPTKVRQIPEYYFLPRRSLSSVLAFY 60

Query: 61 GACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
          GACIAGGIGAGMLVEIWI DKVKKDGGV+WEFDK
Sbjct: 61 GACIAGGIGAGMLVEIWIKDKVKKDGGVVWEFDK 94

[Close]
BLAST of Lsi02G011530 vs. TAIR 10
Match: AT5G16950.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 94.0 bits (232), Expect = 7.0e-20
Identity = 46/97 (47.42%), Postives = 64/97 (65.98%), Query Frame = 0 

Query: 3  EEQKDPFKGVDWKAVGGDMQKDPSSTNI-----IKKRRPTKIRQIPDYYFLPRRSLPSAI 62
          E  KDP+KG +W     +  K P+++ +      +K+ P  +    + YFLPR+  P A+
Sbjct: 4  EGAKDPWKGEEW-GTENEKTKKPTTSGVKTVTRARKQIPRGLEDKYEAYFLPRKPWPRAL 63

Query: 63 AFYGACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
          A+YG+ I GGIGAGM++E WIN KVK+DGGVIWEFDK
Sbjct: 64 AYYGSFILGGIGAGMVIEAWINKKVKEDGGVIWEFDK 99

The following BLAST results are available for this feature:
BLAST of Lsi02G011530 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi02G011530 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8I71.4e-4494.62Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119440 PE=4 SV=1[more]
A0A5D3DB391.2e-4392.47Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3AV521.2e-4392.47uncharacterized protein LOC103483172 OS=Cucumis melo OX=3656 GN=LOC103483172 PE=... [more]
A0A6J1FVE82.7e-4389.36uncharacterized protein LOC111447184 OS=Cucurbita moschata OX=3662 GN=LOC1114471... [more]
A0A6J1IJJ22.3e-4288.30uncharacterized protein LOC111475080 OS=Cucurbita maxima OX=3661 GN=LOC111475080... [more]
BLAST of Lsi02G011530 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004133805.12.9e-4494.62uncharacterized protein LOC101207877 [Cucumis sativus] >KGN56411.1 hypothetical ... [more]
XP_023522177.11.1e-4390.43uncharacterized protein LOC111786056 [Cucurbita pepo subsp. pepo][more]
XP_008437869.12.5e-4392.47PREDICTED: uncharacterized protein LOC103483172 [Cucumis melo] >KAA0048876.1 unc... [more]
XP_022942020.15.5e-4389.36uncharacterized protein LOC111447184 [Cucurbita moschata] >KAG6597065.1 hypothet... [more]
XP_022975548.14.7e-4288.30uncharacterized protein LOC111475080 [Cucurbita maxima][more]
BLAST of Lsi02G011530 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G16950.17.0e-2047.42unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availablePANTHERPTHR36797OS01G0258600 PROTEINcoord: 3..94
NoneNo IPR availablePANTHERPTHR36797:SF3OS01G0258600 PROTEINcoord: 3..94

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G011530.1Lsi02G011530.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane