Lsi02G011050 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G011050
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	U4/U6.U5 tri-snRNP-associated protein 2-like
Location	chr02: 12657220 .. 12672619 (+)
RNA-Seq Expression	Lsi02G011050
Synteny	Lsi02G011050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAATTTCCCCTCATCTTCTTCTTTCTTCTTCTCGTGAAAAGACCCACCCGCTTCATCCCTCCATCTCTCTCTTGCACGTTCATCGCACAGCCGGCCGACCATCGGCTTGCCGCTTTACGCCTCCGTCGGCATCACCAGCCACGCCGCGCCGTCGCTCGTCACCGCCAGTCGCCGGTGAGTTTCCCGTCAACTCTCTCTCTCTAAAAAGATCCCTCTCTTAGCAGTATCTCTCTCTTAAGTGTTCCGCTGCCCTCCGCTCATTGTTGTCGCCGTCGGTCAGGTAGCGCCGCCGCTTGCTAGTCATCAATACACCACTGCCACGGATGTACGGTTGCCGGAATTGTAGTCCAGCAAGCAGTTGGTATGAATTCTTGGTATTTGTGGGTTTTTGTTAATTGATTCTGGTTAATTGCTAATGTTTTGGGTATAAATTTGAGGGTCGGAAGTGTTTGGTTGCTGCCCAGCAAGGATATTGGGGTGAAGTTATATATATTCAGGTCATTTATAAATTTGCTCTATTACCAGAGGGAAAAAAGAGTTGATAGAATGGGATCGAAGAGGCGGAACAATAGTCTTCTAGATGAGGAAGAGTTGGGTCCAGACTTAAAGAGGCATAAATTACTTGGGGAGGTGTCACCTTCTTCTTCTCCACCTGCCTCAGAGAATCCTCAGCTTCCTGGTTTTAACTATGGCGATGATGATGAAGAAGAAGATTACAAATTTAAACAAAATGGAAGTAGATATGATGGAGATGAAGGGGATGGCAATGATGACGAAGAAGATGATGAAGATGATGCAAATCATGTTAAGCGAAGTCGTGATGTTGAAGTTCGAAAAGATTGTCCTTATCTTGATACTGTAAATCGTCAGGTGCATTGCTTGTTTCTTATTTGTATTTTCATTCTGCATTTCTGCATCTTAAGATTATGCCCATTTGTTTTTGCAATGAGTTTGTTACCTTCCGCTAACTATTTAGTAAGTTTTCTTTCCTTCTTGTTAATTTATATCTGTTCATACTTTGTAGGTTTTGGATTTTGATTTTGAGAAGTTTTGCTCTGTCTCTCTATCAAATCTAAATGTTTATGCCTGCCTGGTATGTGGTAAATACTATCAAGGGAGGGGGAAGAAGTCCCATGCCTACACTCATAGTCTTGAAGCGGGACACCATGTGTATATCAATCTTCGGACAGAGAAAGTTTACTGCCTTCCCGATGGATATGAGATTAATGACCCCTCGTTAGATGATATTCGATATGTCCTGAATCCAAGGTTTGCTTATACTTGATCCATTATTTGGTTTGCATGTTATTAGAGCACGGTACACGTACAATAATGTTACATCTGCGCAATGTTGAAGGGAAAATTATTCGAGTTCTAAGTTCAACATTTTTAATGGTCTTTAAGCTAGGACACTTGGAAAATTTTCACCTTTAAGGCCTTTAATATTGTTGTTGTTGGTTTTTTATTTTTATTTTTATTTTTAATTTAAATTAAAAGTTATAAAAGCAACAACTTTCATTGAGATAAAAATGAAAGAATACATGAGCATACAAAAAACCAACCCACAAAAAAGGACCCCAACCACAAGATGGAACTCTAGCTATACAAAATAGAACCTATAGGATAGTTACAAAAGATCTTCAAAATCGAAATCCATAGGAAAACATGAAATCTAATAAGGGACCACACCTCACTAGGATTCGTTTTCAACCCCTTAAACATGTGATTATTTTGCTCCCCCAAAGATCCCACTATATAGCACAAACCCCAACGAGCCATAAAAACCAACCCTTCTCACGAAATGGCGGATCGAGGAGGAACTCCCTACAATCATATCGTCAAACTCCTTGTTCCATGCTAACGAAAAGCCAAAAGTCTGAAAGAACTCACATCTCGTTAGAACGTGATCCGGGTTTTCTTCCATCTTCCAACAGAGAATGTAGCAAAACGGGCCAACTAAGGAGGGCATCTTCCTCACATTGTGATCCAAAGTGTTAACTCTTCCATGTAAAACTGGCCACGAAAAGAACTTGACTTTCCTAGGGATTTTAATTCTCCAAAACACAGAGAAGACTGACTCACCCATGAGAGAAGGATCAATAAGCTTATGAAAGAAAGAGTTACACGAGAATCCCTCCAAAAGATCGGGACTCCACATCCTAAGGTCCTTCCTCCTCTATCTAAAAGCAACTACCTCAAGCAAGGACAAGAGTGAGGCCACATCCATCTTCCCTATCGGACAACAAGCAACGGAACCCAAACGAAAAAGAGTCGGAACCTCCAGACCAAACTAAAAAGTTCGACACAACACGTTTCTTAGAAGAAGAGGGGAAAAGGATGCGGAAACATCAAGCAGAGGGGTCTATCCCACACCCACCAATCTTCCCAAAAGTAAGTATCCTTCCCCTTTCCCATCGCACAACGAACCAAAGGAGAAAAAGAAGGAGAAGGGATCTCCTTAGAAACATCATTCCAAAGATTCTAGTAAGTGTTTATAACCCCTTGCGACAACCAATCGAGCACCAAACTTGCTAGCAATAATCCTATGCCAAAGGAAGTTAAACTCAAGGGGAAACTGCCGGAGCTTTTTGGCTAAAAAGGCCATGTTGTGGATCCTAAGATTCCCAATTTCTAACACCCCCCAACCCCCCGCACCAACCTTTCAATGACCTCTCACCTCTCTAAGTGAGATCCTTTGCCATTGCCTTCTTTCACCTCTTCCCATAGAAAATTGCACGTCATCTTCTCGATACTCTTGCAAACTTCGATAGGAGATCTGAAAAGAAAGAAGTAATGAATGGGGATACCACTCAACGCCGAATGAATCAAAGTAAGTCTCCCAGCTTTAGAGAAAAAGCCTTTTTTCGAAGAAGCCGTCCTTTTCCTAACTTTGTCCACCACTGGGTTCCAAAAAGTTAAGACTTATCTTGCATGCTAATATAGATTTATGGTTCGAATTTGCGAGCAACTAGTCTAGGGAAAAGATTACTGTATGTGGTCAGGCTTGCATCATTGGTCCTTTGAAAATCTATTTTTAGTTCATTGCAACATAACCTAGTTTCATAGTAGAGTTGCACTTAATCTACTTACACTTCTGAATTCAAGGAGACTTCTTCTATTTTTTTTTCCTGGATATCAAATACATCAAACTTCATTAGAAAGCTCCATAAGAAACAGCTTTAGGGATTTTTGAAAGCTACATATGGGTATGGAATCTAGACAAAAATGGATTACTTTCTAAATTCTTATCCAGCAGACTCGTCTTTAGGCGTTATAGGAGAAGCTGATTTCTATAAGCTGATTAAGAATGGGAGATATCCCAAACATGTGAAACTCTTTTTCATGAGAACTCAGCCACTCTTGCTTAATGACACAAGACAAGCTTCAATGAAGATGACCGGGTTTTTCCTTATCTCCTAGAACATTTTGGATTTTGATTCAACAATGTTTTGATTGGTCGATGGTCTTACCTACTGTTTTTTTTTTTTTTTATATCCGTGAGTTTCTGGGCCAGCTTACGCGCACCTCGACTAATCTCACGGGACAACCCGCCTGACTCTAAACATTTGGGTGTCAAGGAAACTCGTAGGAAATTAATTCCTAGGTAGGTGGCCACCATGAGACTTTGTCTCCTTTTTTACCACTAGGCCAACCCATGATGGTTCTTACCTACTGTTATTTGGTCTCTCATGAACATCATTCTCCTCAGGCATCCATTCAAGAAAGAAAAGGAAACCCTTTGAGCTTTGACTTAGTTTCATCTGGGCTTTTTTTGGCCCTTTTGGCTTGAAAGGGACTCGCAGTTCGAGGATATTGGCTCTCTCATTGTGTAAATTGCCTTACCATTTTGTAATTATGGCTTAAGTTCTCTATGTCTCATTGGAAGGATTTTTTTGTAATCCATTGGATTGGATTTCCCTTTTGTAACTTCATTTGATCCATGAAATTTTTGTTTCCTATATATATATGAAAGAATAGCTCGAGGAGGGCAGGGGTAGAGGAAACCTCTCCCAAGAACATTAACACATCCAAAGAGCGCCTTCCAATTTCATATAATCATGGAGCGCGTATGATATAATAACAAAAAGCAGCGGTTTATGTTCCACCAGGAAGCCAAATTTTGTATGCTATACACAGACAATGTTGTTTCTTTCTTTCCAAATTAACCAAAGAATAGTTTTCACCGTCGACTGCCAAAAAATTCTAGCTCTACTCCTTAACCCTAGGTCCCTTTCCAATGGATTGCAAAAGGGAAGAATAGATTTCATCGCCGATTGCCAAAAAAAACTTATGGTTTCCCCTTTGTAACTATTATTGCCATTTTATCCTTTTAAAAGAAAACTGTTATTGCCATTGTAAGAGACTAAGAGTTAGAAACCCTCTAAATCTGCTCAAATTTTCTTGCTGTGACTTTGTACATTTTATTTATTTATTTTTATTTTCGTATTTCAAAGAGAAAGACCTTTGCATTAACATAAGGAGAAGTATACAATAGTATCAACTCCTAAGAAGATTGCAAATTATAGAAGGGATTCAAGTACAAAACATATTTTCCCTACTCCAATTAATCTTCCTTCAAGAAGAAAGTGAAGTCTCTTTGACAAAATCTTATACAAAGCATTCTTTTGTGCATTTGGATAGAAAAAAATCATTATATTTTTGTTGGCGTAGAAAGGAATTTATATTAAACTCATACTTCATTGATTTTATCATTTTTGTTATTGCCTCCTGGTATAGGACCGTCCATTTATTTTGTTATTATCCTTTTTCTGATTTTTGTGTTGATTGGAGGGCGTAGTTGTAAGTGTAATTTCCATTTGTCTAGGTGGAGGCTTTCCTTGCCATCTTTTGTACATTTCAGAATCTTAATAAACTTTCATTTGGAAAAAATATATCCACCTTGCTCCATATAGTTTTTTTTTTTTAAAACGAAAACAATACTTTTCATTGAAATAATGAAATGAGTCTAATGCTCAAAATATAAAAAGGAAACAAAACATAAAACTAACAAGAAACTAAAACTTGTTAGTACGAAACGAGTAATACAAGACTAATCCAAAATTCAACTAATAGAAGAAGAGGATATAAATGCATTCCAATTTAAACAAATCTCTTGAATTGAGTAATCTGCAAAAAGTTTGGAAAGAAAGCACCATGAAGCAGTCTTGCTTCATATCTTGATTTTCTCTTTCAAGTTTTTCAATTTTTCCACGAGCTTAAAACTTGGCCATCTTTCTAAGCTATCCCCCCTCCCAGGCCCTACCAATTTAGTGATCCTGGAGCCAAGAGTTTTGGAGTTTGAAAGGTGTTTGACCCTGTAGTATACTGGTGAATCCAGAAAAAATGGAGCGTGGTCTGATATCAGTCATCTTCTTCGTAGCTTTGGAGTCTTGGAGCATATCTATCCATTCTATAGTTACCAAGAAGCAGTCAAACGGGATTGTATTGCCTCCTCTCTTATATTAGACCAAATGTAGTATCCATTGCTGATGGGAAGATGTACCAAAAAGTGCATCTTGTGCTTCTCTTTGTTCTTCTAAGTTCCACCTCGTGGGATGAAAATCCTTTCCTCCTTGTTTTTTGCCCTTGCAGAAAAATTAATGCATTTTATTATCGACCAGTTGATGTTTTATTTTGTAACCTGTTATTTTGAATGTGATTTGAACTGATGGATCTGCCACAACATTGACAGCTCCATTATATAAATTTTGTTTTCACTTAGCATCTTTGGTGAAACACCATCATGAGTCATCAAATCATGAAATCCTCAATCCCAAATTTGGGAAGTATATGAGAGATTTAGGGATGTTCCTAGCTGTTGAAACCATATCCAATGTATTTTTATCTTTTAGTGAAAATGTGTGACAAAAGTTAAAATCAAAATAGAAGGGTGGAAGGCCTAAAAGCAACCGAATTTATAGTAGGAGGGGCAAAATGAGAGAAGGTGCAAAGCTTTGACATGATTGTAGGGGGGTGAGGTTGTGTTTGTTGTTGTATGGTTTTGGGGGGGTGGGTGGGGGTATTTTGGGTTTCAGGTGTGCATTCTTTTTGTGGATCATGTAGCTAAGGCTTTTAGGTAGGAGGTTCTCCCAACTCCCTCGAATTGGATGGTGAGGCATGTTTGGCTGTTTGGTTATTTTCGGCTTATCATTGTTTGTAATTGTTGGTAATTTCCAAAAAGTACCAATAGAACCGTGCTTTCCCTATTCATTCTCTATTTTCTAGTGCTTTTGTGTTTGGTTTTGTTGCTGGTTATTGTTAGGGAGAAGTTCTGTACATATTGATATCATAACAGTACATCCTAGGGAGATTGGGGAAAAAATGGCTCAACGAAAGATAAAGGAAAGCTTAGGTGGAAACGATAGTGATATCAAGGAGACGAAGGAAATGTTGAAAGAATTGGTACGAATGAAGTATGACCAGACTAACCGTAGATGTCTCAGATAATTGTTGTCTTGAACAAAGGGTGGAAGAAACGCAAAGAGGAGTAGTGTCTCTAATGTTGGAGATTACGAGCAATAGGTTGAAAGAGCCCTTCATATAGAGTGCTAACACTTTGGATCGGCTTGCGAGAAAGATGGCTTCGCTAGTTGATGTGGTTTGTTGTATTCTCTGTCCAAAGGTGAAGGAAGACTTGTATCACAGTCTTTGGGGATGTAAGTTTGCGAGATCTATTTGGAATCTTTTCTTCCAAACGTTTGATTTTTCATTGGCCCCGACATAAGGATACTAGAGATATGATGGGGGAGTTTCTCCTAAATCCACCTTTTCATGATAAGGGCTAGTTGGGCCTAGTGTTTTTAAATGCCCAAGGCGCACTAATGCGCAATGACCCTCTGGAGCCTAGACGCAAGGCGCACAAAAAGGCGCGGACTTTTTTTGTGAGGCGCACTTTATATAAAAAATTACATTAAAAAGAGAAAGCATAGTTAAAGTGGAAATATGGAAAAAAAAGGACCCCAAACACAAGAAATTTTGCATTTAGGCTTAGCAAACTTGATTCTTTTAGTTAATAAAGAAGGAAAACCCTTAATTATTACTATTTTTTAAAAATAATGTAAAAGCCCCAAGGCCCAGGGCTTTGAGCCTTGGGGCTTCACAAAAGGCGCGCTTTATTTTGTGAGCCTCGCCTTTAGCCTAGGTGTGCGCCTGAGAGGGCTTTTTAAAACACTGGTTGGGACGTGTGCTATTTTGTGGGATCTTTGGGCTGAGTTGAATAACAAAGTGTTTAGAGGGTTGGAGAGGGATCCGAGTGAGGTTTGGTCCTTGTTAAATTTCATATTTATTTTGGCCTTCGATTTTCAAGATCTTTTGTAATTATGTCTTAAACAATATTTTGTATAGCTGACCCCCTTTCTTTAATGAGGTCCCCTTTTACGGGCGAGGATTTTTTGTATGCCCTTATCTTTCATTTTTTTTTTCCTTAATGAAAGTTGTTTTCATTACTGAAAAAAAAACTCTTGCCATTTAGAGCGAGTCTATCGAAAAGAAAATGAAAACAATCTATGGAGGAGGAAGCGACTACCATGACTGTGATGATGGTGAGTCCTCAAGGAGGGAGGATTCGATAACAAAACACTGTAGGTTTAAGAAGGTTGAGATTCCAATGTTTTCCGGAGTAGATTCAGACTCGTGGTTGTTTTGTGCTGAATGGTATTTTGACATTCATAAGTTGATGTGGAAAAGGTTAAGGGTGGCCGTCATAAGCTTTGAGGGAAAAGCGATAAGTGGTATGGATGGGCTGTGAACGAAGAACCCTTTTTAGGGTGGACAAAGTTGAAGGCTCAAATTTTTGAGAGATTTTGGCCGTTGTAGGAGGGGAGATTGTGCGCATGGTTAATCGTCGTGAAGTAGGAGGGAACGATTGCAGATTATCATGAACTTTTTGAAGGGCTGTGGCGATGTCTTATAGAACACATTTTTAATTGGGCTAACCCCTCATATTAGGGAAGACTTCCTCAGTCGTTGGCTTGAAAAATATTATGAGGCAAGCCCAACTCATGGAGGATAGGGAGCTAGTGTTTAAATTGGCCCAAGAATCAGAAGATCCAAGATAGGCCACAAACTTGAGAAAAGGAAGTGGGAGTGAAAATGGGTTGAATAAGATGACCCAATCAACTGTATGGAAACCCTCATGTCGAGTGGCTAACCCAATGCCTACTTGCACCGTGACTTTGCCAGAAAAAAGGGGGTGGAGCAAAGTGGGAGCCTAATTTGAAACAAATATCTAATAAAGAATTTCATGTGCAAAAAGGGAAGGGGCTTTTTTGTGTTACAACTTGCAACGAGAAGTATTCAATCGACCATCCTTGTAAGCTACTAGAGATAAGAATCATGGTTGCATGTGAAGAGGGAGAAGTTGAGTTGGATACAGAGGAATGGTACGTTGGCTGTAACAATGAATGATCTCAAGAGGTTGGGGAGTTGGCGGAGGTGACGCTAAAATCGGTGTCGGGATTTTCGAGTCTGAGCATGATCAAGCTCAGAGGAAAAGTGGGAGACCACAAGGTTTTAGTATTGATTGACTGCGAGACAACCCATAATTTTATATTCATCATGTTGGTTGAAATAATCTCTATCTAGACTTACAAGAGTTGTTGAATGAATTTGAGTATGCTTTTGAATTGCCACTAGGGTTACCATCAAAGAGGGAAGTGGGCCATTGATTAAGCTGATTGAAGATTATCCACCCATCATTGTCAGGCCATACCATTATGTGGTTGGGGGAGTGAGGGTGTGTTAGTTGTTTTACGGTTGGAGGATCGTTACTTTGGGTCCCGGGTATGTTAGGCTCCTTTTGTGAATTGTGTGTTAGGATACCTCCTAACAAGAACACTTAAGAACACAAAGAACAAATAAACAACAATAAAGGATAGATTTATATTTTAATTATCAATGAAGAAACTACAATATACCATAGCCTTTTGAGAGGGCTACTCTCTCCCACTATTTCCCAATCAGGAAATCACTACCAAATATTCCACACCTTACTACCACTCCCACTCCTATTTATAGCAATATTTAATAACTAACTTCCTATCTAATTACCCTTATATCCCTTACCCCTATCATACTAATTATCCCAATATATTCCTAACTAGGAGCCTTACAATACTCTGCCCTTTGAAGACACCTTGTCCTCAAGGTGTGGTTACAAAACACAATCACAAAAATGGGCACCATATTTCTCACTTTTTTTTCTTTCTTTTTTTTTTCTTTTTTTTTAATGCAATAAAAGAAAACTGAACCCACTATGAGCCTCCTTGGAAGGAATTGTCTTCCCTTTATTTTTGAAAATCTTCAGTAATTTCGTTCTATTGATTAAACAGCCCAAGACCCCATAAACTTCCATAATCTTCTTTCTTCTCACAATGCCCCTTTGAATATCCCCGGGCCCATTTCCACGCCATATGTATTGATATTTTAACTTGAAGCTCTTCCTCTCTAATGGGCTAGGCCCATAATCAACTTTTTGCTCCAAGCCCCAACCCAGCTTTTGGGCCCATACACCATCTTTCTTAAAAATACCATTGAGCTTCATGCCCATTCCATCCCATACTCAAGCCCTTTTTCTGCCACTCTATCGACTGGGCCTCAATGAATTTATGAAATTCAAGCCCAGGAAGCTCCTCGGTTCTTTCTTCATGAATTTTCACTTGGCTGACTTTCCATGTTTTCAGCATCTCCCAGCCTTGAATTTGTTTTTCCAACCATTTAATGCAAACCCAACCCTCACGCACAATTTGGGCCCAACGTCTCCATACAAACTAAACCTATTTGAGAAAATCTGGGCCTTTTTTTAATCCATAATTATTATTGCCACTTTTTCTACTTCTTGGCTCCACCTTCTGACACTTCACGTGGGTAGCAAACTGTTTTCCCTCCTCTTCACGAAAATTTCCTCCTTCCCAATTCATCTTCTCCGTACATTGTAGGCCAATGTCGACTCCCTCTGCAAATTTTGGCATATCCTTCATGAAGATTGACCGATTTGCTTGCGTCTTCACCGCCACCCACATTCCGGCGACCTCCATTCGTGCATCTGCTCTTCCACCGCCGTCGCACATCTCCACCTCCTCTTTTTGCAACTGGTCCCCCCGGTTGCAAGTTTTCTACTTCGTCCAACTATCGATGTTCGTCTCGGTGTCTTTCTTCTGCTGCGACTTCCTCCCTCCACCTTTTTCCGTCGTGACCCAAGACGATTCCGTTAGCCGGTCTCTTCGTGGTCTCAACCCAAGAACCATTGGCTTCTCCTCTCTCCATCTCGGCCAACCATCCTCTGCCTCCTTGAGCAACGACAATTTCTTTGTTCTTCCGGCATTGATCGCCAGCACGTCTATGCTCCGTCGATTTTCCGCATGCTTTCCTCTTCGCGTTTCTGACCATGTGTTCGCCAGTGGGTGTTCCTTCCTCTATTTCTTCTTTCGGCTGTCATCTCGCCTTATTGAGAGTAATGTTTGTCCCCTTGGCTCTGATGCTTCTATCTTCTTTGATCGGTGTTTCCACTTCCACCAATTCCTTCTCTTCGACCATCTCACCCTTCGTCGTTGCCGCCGGTCATGGACATTAACGATCAGGTGACACTTCTTCTTTCCGTCTTCTTTATGACCATTTTCCTCTGATTCCTCCATCTTCGAGTCACCATCCTTTTTTTCCTTTTCTCCTCTGCCTTGGAGCCCTTCATCACTTCCCTTCTTTTCTTTTGCTTCCATTGATTTTATCTCCTTGTAGTTTTCACAGATTTCACAGGATTTCCTTCCCTCTCTACTATCTTCAGTGACGATTTCCCCTTAACAGGGCTTGACGCCTTTCCTTCTTCCTTTGATGCCTTGCGATGGTTGTGACAATCCTTCCATAGACACGCTTTCGGTTGTGAGCTCACTAGAAGTTTCAGATTCCACTCCCCTCACCAGCGTTTCTTGATTCTCTTCCCTTGAAGGTATGATCCTCTGAATTTCAACATTCAACTGTTTCATACGTTGAAGTAGGGAATGCATCATTTCTTTGATCTCAACCTTGCCTCTATCGAGATCATCCAACCTCTCTTCCATTGTTTTCTGAACCATTTTTTTTTCTTCTCCTCGGGTTTCTTGCAACTTTTCCTCTCGGATTTCTCTTTCAGTTCTTTCGCGCTTGCGTTTTGCCACCCCCCATTTCTGCAGTTGCTCCCATGTCCATGGAGTTTCTCCCATTGCCAAACAAAAACAATTTCCAAGAAAGAACGAGCTCTGATACCAATTTGTTAGGATACTTCCTAACAAGAACACAAAGAACAAATAAACAACAATAAAGGATAGATTTATATTGTAATTATTAATGAAGAAACTACAATATACCATCGCCTTTTGAGAGAGCTACTCTCTCCCACTATTTCCCAATTAGGAAATCACTACCAAATATTCCACACTTTACTACCACTCCCACTCCTATTTATAGCAATATTCAATAACTAACTTCCTATCTAATTACCCTTATACCCCTTACCCCTATCATACTAATTATCCCAATATATTCTAACTAGGAGCCTTACATTGTGTAGCTGAGGATTTTGGGTAGGAGGGTTTTCTTGCTCCCTCAAATTGGCTGGTGAGGTCTGTTTGATTGTTGTTTGGTTATATCTGGCTTATCATTATTTGTCATCGTTGGTAATTTCAAGAAGTATCAATCGTAGAGTGCCTCCTATTCAATCTCTGTTTTCTGGTGCTTTTGTGTTTGGTTTTGCTGCAGTTTATTGTTAGGGAGAGACTCTTGACAAAGGGAATGTTGTAGAATTACCTGCAGGACCATAGTAGTCTGTAGTCCACCTTGGAGATATTTCTTTAGAAACTTGTCATATATTTATTTTCCAATTTTAGGGAAAAATTAAGTGTATATAAAAATTATAATCCCTACTCGTCTAAGATACTTATTAGACTTGAAAATTAAAATTAGAATTTCAGAAAACTAAAGGCTTGTTTAAATGAGACTAATTATTAAAACATATCATCAAACTTGAGCAGAATATGAAACATAAAACGCTATAAATGAGAGAATATGATAAAACTATTGTGCTTGACTATGAATAGATATCATGCCGTCTTTAATGAAATGTGCTTTAATGATCATTTTGGCATTGCTTGCAGGTTTGCCAAAGAGCAGGTAGAGCAACTTGACAAGAACAAGCAATGGTCTAGGGCACTCGATGGTTCTGATTACCTTCCTGGAATGGTAATTATATTTTTCATTGTAGTTGGGTTGTCTTATTTGTTACATTTGCAACAAGGCCTAAATTTGGATTTCATGGAACCCAGGTGGGGCTTAACAACATTAAAGAAACCGATTTTGTAAATGTGACAATTCAGTCCTTAATGAGGGTTACACCACTCAGGAACTTCTTTCTAATACCTGAGAACTATCAGCACTGCAGATCTCCACTTGTTCACCGGTTTGGTGAACTCACACGTAAGATTTGGCATGCAAGAAACTTCAAAGGACAGGTTTGACTTTACTGTTCATTGACATTCTTCTCGGCTGTGGTTAAGTTTGTGGTTTTTAGATTCAAAAATTTTGAATCTTTAAGAATTTATAGGTAAGCCCGCATGAGTTCCTGCAAGCAGTCATGAAGACTAGTAAAAAGCGTTTTCGAATAGGTGCACAGTCAGATCCTGTTGAATTTATGTCATGGTTTCTTAACACACTTCATTCAGAACTGCGAATTACAAAGAAAAGTAGTAGTATAATCTACGAGTGTTTCCAGGTTCTCTTCAATTTCCTAGAGTAATATTGTGAATTATGTTCTATTTGTACTAGTAAACTGGAACTTATGTTGTATATTTATATTTTGGATAGGGGGAATTGGAGGTTGTCAAAGAGATTCACTCGAAAGCTCTCGCTGAGAAGAAAGAAAATGGTGATGATCAGGATGCTGTAACTGAAGGTAGCAGCGTGATAATGGAAACTTCAAGAATGCCATTCTTAATGCTTGGATTGGATTTACCGCCGCCACCTCTTTTCAAAGATGTTATGGAGAAAAATATAATACCGCAGGTAGGTGTAATTTTGTTGCTAGTGTCTTCTGCGCAGGAAGATACTCATTCAACCACTAGTTCCCACTGTCTTTCGAAAGTTTTCATTTGGTGCTTAATTCAATATTGGATAGTTAATTGATTTTGAGATTACTCAAGACAACGTATGCCACAACTTTCTCTCTTCTCTTTTTCCCCCTCTATCACCAGACTTCCAAACCATCCCAACCATTATCCCCATTGAATGTCCAGTCCCATTCACCATGCGGTTTCTTCATCCAATCCTTTTGGTCATCACAGAGGGGAAACCCTTCTCTATCCAAGTTGACTCTAGATCTAAAGCTACAGAGTCTGCATAACCGAAGCTGCTAGAGATAGGTCCTTCTCCACGTCCATTCACTGGAGTTCTCTAGGATGGTTCATCGAAAGCCTGAAGTTGCTGTTGAGTGTACCTCTGAACCAGAAGTTCTCAAGAAACAAGAGTTAGATAAATTCTTTGGTTAGAGAAACTTTCCAGATAAAAGGGTTACTCTGTAGAGTTGGTTAAGCATGGCTATAATGGAGGGAAAACCGGGTACTCAATCCAATAGCAGATCAAAGAAAATGATTGATTTTGTAAACCTCATTACTATCTACCACTCTTGTTCCTAAGAGGTCGTAAATGACAACCACCTCCCCTGTTTCAAGCGGAATTTGTTTGTTTCTTATGCTTGACTTTCTGCTATTTGGTAAAAATGGTTGAGAATTTGAGGCTGGCATGGGTTGGAGAATCAAAGGCCTTTCAGTGCCTTCTTTTTGGAGGCAATCGTTATCAGAGGAATCTAAAATTGTTGGTTGTTTCGATAGTTGCTGTTAGTTAGGAGAATTGAAGAGGAAAGGCTTGGAAACTTTTTGAAATATAAGAAGTTATTTTCTTCTTTTTCCCCCTTATACATGTTGGATATTATTGATTATGAAGCTTCTTCTTATCTTCATACCTTTTAGTTTTATAAACTTTTCTTTCTCTAGTTTCCCTGGTCCTTCAGCGTAGGGGTTGAGCCCCAACTTGTCGCACGTCTTAACTCTCTGTTAATAGAAAGGTTCCTCTTAATTATGAATTGTGGTCAATCAGAGTATATCTATGACCTAATTTTCTGAATGTCCGTTTATTTATTTCTTTTCTAGGTTCCACTCTTCAACATTTTGAAAAAATTTGATGGTGAAACTATCACAGAAGTTGTACGGCCACGTATAGCAAGAATGCGCTACCGGGTTACTCGATTGCCTCAGTACTTAATTCTTCACATGCGGCGATTTACAAAAAACAACTTTTTTGTGGAAAAGAATCCCACATTAGGTAGTTACTTGCACTAATATTTGCAGAAATATTACTGTAGTGAAAGCCTCCTTAATGTGCCATCTTCAGGTAATTTAATAATTTTGACATTTTGGTCTCAGTGAACTTTCCCGTGAAGAATCTTGAATTGAAGGATTACATCCCCTTGCCAACACCTAAAGAGAAGGAAAAATTGCGTTCAAAGTACGATCTGATTGCAAATATTGTTCATGATGGCAAACCCAACGAAGGGTACTACAGGGTATTTGTACAGAGGAAGTCGGAAGAATTATGGTAATTTTCTTTCCCTTTTTTGTAAATGGTACCACATGATCTATAATTTGTCTGATCCATGGTGATCTGACGTTGATATTACAGGTACGAGATGCAGGATCTTCATGTCTCAGAAACACTTCCTCAAATGGTTGCTCTCTCTGAGGCTTATATGCAGATATATGAACGGCAGCAATAGATAGGAAGTTCAATATCTACATCTAACTGCGTAATTAGTTTTGGTTATTTTCTCTCTAGAAGATATGTACCTGTACTTAAACAGGAGATGAGAGTAGATAAAGCTTTGAAATCCGTGATATAAAGGAAGCTTGCTGCGACTAATCTCTTTGTTTAATTGTAGAATCAATGATCACATTGAACATACTTTGGAAACTTGGAGTGAAAAGGGATGGACTATGCTGCTACGCACTCCTTTCAGTAAAGCAGGTGAAATTTTGTTGCCAATATTAATATTCAGTTTTCTGTAACATAACATTGATTATCATATGTTAGGGCTGTAATTTTCATCATTCTAAATATTTCTATGCAACGGGATAATTTTTGTGTGTTTAGAGGATTTGTATTTGCAGAGATTTGATGTGAAGGCATAACTTCGTCTTAGTAATTTTGAATATCTACTGAATTCTAGTGTTTGAACCATTATAATGGTTGTTTCCTTTACTAATGGGCAATTCGAAACTTGTTAAGTTGATGATCCGCATAGTTTACCACTTCATTATCATAGTAAATACATGTATAATATTTGAGTGTCAAAGAAACTAGGAGGATATTAAATCCTAAATTAGG

mRNA sequence

CGAATTTCCCCTCATCTTCTTCTTTCTTCTTCTCGTGAAAAGACCCACCCGCTTCATCCCTCCATCTCTCTCTTGCACGTTCATCGCACAGCCGGCCGACCATCGGCTTGCCGCTTTACGCCTCCGTCGGCATCACCAGCCACGCCGCGCCGTCGCTCGTCACCGCCAGTCGCCGGTAGCGCCGCCGCTTGCTAGTCATCAATACACCACTGCCACGGATGTACGGTTGCCGGAATTGTAGTCCAGCAAGCAGTTGTGTTTGGTTGCTGCCCAGCAAGGATATTGGGGTGAAGTTATATATATTCAGGTCATTTATAAATTTGCTCTATTACCAGAGGGAAAAAAGAGTTGATAGAATGGGATCGAAGAGGCGGAACAATAGTCTTCTAGATGAGGAAGAGTTGGGTCCAGACTTAAAGAGGCATAAATTACTTGGGGAGGTGTCACCTTCTTCTTCTCCACCTGCCTCAGAGAATCCTCAGCTTCCTGGTTTTAACTATGGCGATGATGATGAAGAAGAAGATTACAAATTTAAACAAAATGGAAGTAGATATGATGGAGATGAAGGGGATGGCAATGATGACGAAGAAGATGATGAAGATGATGCAAATCATGTTAAGCGAAGTCGTGATGTTGAAGTTCGAAAAGATTGTCCTTATCTTGATACTGTAAATCGTCAGGTTTTGGATTTTGATTTTGAGAAGTTTTGCTCTGTCTCTCTATCAAATCTAAATGTTTATGCCTGCCTGGTATGTGGTAAATACTATCAAGGGAGGGGGAAGAAGTCCCATGCCTACACTCATAGTCTTGAAGCGGGACACCATGTGTATATCAATCTTCGGACAGAGAAAGTTTACTGCCTTCCCGATGGATATGAGATTAATGACCCCTCGTTAGATGATATTCGATATGTCCTGAATCCAAGGTTTGCCAAAGAGCAGGTAGAGCAACTTGACAAGAACAAGCAATGGTCTAGGGCACTCGATGGTTCTGATTACCTTCCTGGAATGGTGGGGCTTAACAACATTAAAGAAACCGATTTTGTAAATGTGACAATTCAGTCCTTAATGAGGGTTACACCACTCAGGAACTTCTTTCTAATACCTGAGAACTATCAGCACTGCAGATCTCCACTTGTTCACCGGTTTGGTGAACTCACACGTAAGATTTGGCATGCAAGAAACTTCAAAGGACAGGTAAGCCCGCATGAGTTCCTGCAAGCAGTCATGAAGACTAGTAAAAAGCGTTTTCGAATAGGTGCACAGTCAGATCCTGTTGAATTTATGTCATGGTTTCTTAACACACTTCATTCAGAACTGCGAATTACAAAGAAAAGTAGTAGTATAATCTACGAGTGTTTCCAGGGGGAATTGGAGGTTGTCAAAGAGATTCACTCGAAAGCTCTCGCTGAGAAGAAAGAAAATGGTGATGATCAGGATGCTGTAACTGAAGGTAGCAGCGTGATAATGGAAACTTCAAGAATGCCATTCTTAATGCTTGGATTGGATTTACCGCCGCCACCTCTTTTCAAAGATGTTATGGAGAAAAATATAATACCGCAGGTTCCACTCTTCAACATTTTGAAAAAATTTGATGGTGAAACTATCACAGAAGTTGTACGGCCACGTATAGCAAGAATGCGCTACCGGGTTACTCGATTGCCTCAGTACTTAATTCTTCACATGCGGCGATTTACAAAAAACAACTTTTTTGTGGAAAAGAATCCCACATTAGTGAACTTTCCCGTGAAGAATCTTGAATTGAAGGATTACATCCCCTTGCCAACACCTAAAGAGAAGGAAAAATTGCGTTCAAAGTACGATCTGATTGCAAATATTGTTCATGATGGCAAACCCAACGAAGGGTACTACAGGGTATTTGTACAGAGGAAGTCGGAAGAATTATGGTACGAGATGCAGGATCTTCATGTCTCAGAAACACTTCCTCAAATGGTTGCTCTCTCTGAGGCTTATATGCAGATATATGAACGGCAGCAATAGATAGGAAGTTCAATATCTACATCTAACTGCGTAATTAGTTTTGGTTATTTTCTCTCTAGAAGATATGTACCTGTACTTAAACAGGAGATGAGAGTAGATAAAGCTTTGAAATCCGTGATATAAAGGAAGCTTGCTGCGACTAATCTCTTTGTTTAATTGTAGAATCAATGATCACATTGAACATACTTTGGAAACTTGGAGTGAAAAGGGATGGACTATGCTGCTACGCACTCCTTTCAGTAAAGCAGGTGAAATTTTGTTGCCAATATTAATATTCAGTTTTCTGTAACATAACATTGATTATCATATGTTAGGGCTGTAATTTTCATCATTCTAAATATTTCTATGCAACGGGATAATTTTTGTGTGTTTAGAGGATTTGTATTTGCAGAGATTTGATGTGAAGGCATAACTTCGTCTTAGTAATTTTGAATATCTACTGAATTCTAGTGTTTGAACCATTATAATGGTTGTTTCCTTTACTAATGGGCAATTCGAAACTTGTTAAGTTGATGATCCGCATAGTTTACCACTTCATTATCATAGTAAATACATGTATAATATTTGAGTGTCAAAGAAACTAGGAGGATATTAAATCCTAAATTAGG

Coding sequence (CDS)

ATGTACGGTTGCCGGAATTGTAGTCCAGCAAGCAGTTGTGTTTGGTTGCTGCCCAGCAAGGATATTGGGGTGAAGTTATATATATTCAGGTCATTTATAAATTTGCTCTATTACCAGAGGGAAAAAAGAGTTGATAGAATGGGATCGAAGAGGCGGAACAATAGTCTTCTAGATGAGGAAGAGTTGGGTCCAGACTTAAAGAGGCATAAATTACTTGGGGAGGTGTCACCTTCTTCTTCTCCACCTGCCTCAGAGAATCCTCAGCTTCCTGGTTTTAACTATGGCGATGATGATGAAGAAGAAGATTACAAATTTAAACAAAATGGAAGTAGATATGATGGAGATGAAGGGGATGGCAATGATGACGAAGAAGATGATGAAGATGATGCAAATCATGTTAAGCGAAGTCGTGATGTTGAAGTTCGAAAAGATTGTCCTTATCTTGATACTGTAAATCGTCAGGTTTTGGATTTTGATTTTGAGAAGTTTTGCTCTGTCTCTCTATCAAATCTAAATGTTTATGCCTGCCTGGTATGTGGTAAATACTATCAAGGGAGGGGGAAGAAGTCCCATGCCTACACTCATAGTCTTGAAGCGGGACACCATGTGTATATCAATCTTCGGACAGAGAAAGTTTACTGCCTTCCCGATGGATATGAGATTAATGACCCCTCGTTAGATGATATTCGATATGTCCTGAATCCAAGGTTTGCCAAAGAGCAGGTAGAGCAACTTGACAAGAACAAGCAATGGTCTAGGGCACTCGATGGTTCTGATTACCTTCCTGGAATGGTGGGGCTTAACAACATTAAAGAAACCGATTTTGTAAATGTGACAATTCAGTCCTTAATGAGGGTTACACCACTCAGGAACTTCTTTCTAATACCTGAGAACTATCAGCACTGCAGATCTCCACTTGTTCACCGGTTTGGTGAACTCACACGTAAGATTTGGCATGCAAGAAACTTCAAAGGACAGGTAAGCCCGCATGAGTTCCTGCAAGCAGTCATGAAGACTAGTAAAAAGCGTTTTCGAATAGGTGCACAGTCAGATCCTGTTGAATTTATGTCATGGTTTCTTAACACACTTCATTCAGAACTGCGAATTACAAAGAAAAGTAGTAGTATAATCTACGAGTGTTTCCAGGGGGAATTGGAGGTTGTCAAAGAGATTCACTCGAAAGCTCTCGCTGAGAAGAAAGAAAATGGTGATGATCAGGATGCTGTAACTGAAGGTAGCAGCGTGATAATGGAAACTTCAAGAATGCCATTCTTAATGCTTGGATTGGATTTACCGCCGCCACCTCTTTTCAAAGATGTTATGGAGAAAAATATAATACCGCAGGTTCCACTCTTCAACATTTTGAAAAAATTTGATGGTGAAACTATCACAGAAGTTGTACGGCCACGTATAGCAAGAATGCGCTACCGGGTTACTCGATTGCCTCAGTACTTAATTCTTCACATGCGGCGATTTACAAAAAACAACTTTTTTGTGGAAAAGAATCCCACATTAGTGAACTTTCCCGTGAAGAATCTTGAATTGAAGGATTACATCCCCTTGCCAACACCTAAAGAGAAGGAAAAATTGCGTTCAAAGTACGATCTGATTGCAAATATTGTTCATGATGGCAAACCCAACGAAGGGTACTACAGGGTATTTGTACAGAGGAAGTCGGAAGAATTATGGTACGAGATGCAGGATCTTCATGTCTCAGAAACACTTCCTCAAATGGTTGCTCTCTCTGAGGCTTATATGCAGATATATGAACGGCAGCAATAG

Protein sequence

MYGCRNCSPASSCVWLLPSKDIGVKLYIFRSFINLLYYQREKRVDRMGSKRRNNSLLDEEELGPDLKRHKLLGEVSPSSSPPASENPQLPGFNYGDDDEEEDYKFKQNGSRYDGDEGDGNDDEEDDEDDANHVKRSRDVEVRKDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKTSKKRFRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSKALAEKKENGDDQDAVTEGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETITEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKEKEKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQMVALSEAYMQIYERQQ

Homology

[Close]

BLAST of Lsi02G011050 vs. ExPASy Swiss-Prot
Match: Q53GS9 (U4/U6.U5 tri-snRNP-associated protein 2 OS=Homo sapiens OX=9606 GN=USP39 PE=1 SV=2)

HSP 1 Score: 481.5 bits (1238), Expect = 1.4e-134
Identity = 259/489 (52.97%), Postives = 332/489 (67.89%), Query Frame = 0


Query: 122 DEEDDEDDANHVKRSR-DVEVRKD--CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLV 181
           DE+ + +     K  R D E R+   CPYLDT+NR VLDFDFEK CS+SLS++N YACLV
Sbjct: 79  DEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLV 138

Query: 182 CGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLDDIRYVLNPRFA 241
           CGKY+QGRG KSHAY HS++  HHV++NL T K YCLPD YEI D SL+DI YVL P F 
Sbjct: 139 CGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFT 198

Query: 242 KEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPEN 301
           K+Q+  LDK  + SRA DG+ YLPG+VGLNNIK  D+ N  +Q+L  V PLRN+FL  +N
Sbjct: 199 KQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDN 258

Query: 302 YQHCRSP-------LVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKTSKKRFRIGAQSD 361
           Y++ + P       LV RFGEL RK+W+ RNFK  VSPHE LQAV+  SKK F+I  Q D
Sbjct: 259 YKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGD 318

Query: 362 PVEFMSWFLNTLHSELRIT-KKSSSIIYECFQGELEVV--KEIHSKALAEKKE----NGD 421
            V+F+SWFLN LHS L  T KK  +I+ + FQG + +   K  H    AE+KE    N +
Sbjct: 319 GVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHNDE 378

Query: 422 DQDAVTEGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETIT 481
            Q+ + E +          F+ L LDLP  PL+KD  E+ IIPQVPLFNIL KF+G T  
Sbjct: 379 YQETMVEST----------FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEK 438

Query: 482 EVVRPRIARM-RYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 541
           E    +   + R+++T+LP YLI  ++RFTKNNFFVEKNPT+VNFP+ N++L++Y  L  
Sbjct: 439 EYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREY--LSE 498

Query: 542 PKEKEKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQMVALSE 593
             +     + YDLIANIVHDGKP+EG YR+ V       WYE+QDL V++ LPQM+ LSE
Sbjct: 499 EVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSE 555

[Close]

BLAST of Lsi02G011050 vs. ExPASy Swiss-Prot
Match: Q3TIX9 (U4/U6.U5 tri-snRNP-associated protein 2 OS=Mus musculus OX=10090 GN=Usp39 PE=1 SV=2)

HSP 1 Score: 481.5 bits (1238), Expect = 1.4e-134
Identity = 259/489 (52.97%), Postives = 332/489 (67.89%), Query Frame = 0


Query: 122 DEEDDEDDANHVKRSR-DVEVRKD--CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLV 181
           DE+ + +     K  R D E R+   CPYLDT+NR VLDFDFEK CS+SLS++N YACLV
Sbjct: 78  DEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLV 137

Query: 182 CGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLDDIRYVLNPRFA 241
           CGKY+QGRG KSHAY HS++  HHV++NL T K YCLPD YEI D SL+DI YVL P F 
Sbjct: 138 CGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFT 197

Query: 242 KEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPEN 301
           K+Q+  LDK  + SRA DG+ YLPG+VGLNNIK  D+ N  +Q+L  V PLRN+FL  +N
Sbjct: 198 KQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDN 257

Query: 302 YQHCRSP-------LVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKTSKKRFRIGAQSD 361
           Y++ + P       LV RFGEL RK+W+ RNFK  VSPHE LQAV+  SKK F+I  Q D
Sbjct: 258 YKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGD 317

Query: 362 PVEFMSWFLNTLHSELRIT-KKSSSIIYECFQGELEVV--KEIHSKALAEKKE----NGD 421
            V+F+SWFLN LHS L  T KK  +I+ + FQG + +   K  H    AE+KE    N +
Sbjct: 318 GVDFLSWFLNALHSALGGTKKKKKTIVNDVFQGSMRIFTKKLPHPDLPAEEKEQLLHNDE 377

Query: 422 DQDAVTEGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETIT 481
            Q+ + E +          F+ L LDLP  PL+KD  E+ IIPQVPLFNIL KF+G T  
Sbjct: 378 YQETMVEST----------FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEK 437

Query: 482 EVVRPRIARM-RYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 541
           E    +   + R+++T+LP YLI  ++RFTKNNFFVEKNPT+VNFP+ N++L++Y  L  
Sbjct: 438 EYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREY--LSE 497

Query: 542 PKEKEKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQMVALSE 593
             +     + YDLIANIVHDGKP+EG YR+ V       WYE+QDL V++ LPQM+ LSE
Sbjct: 498 EVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSE 554

[Close]

BLAST of Lsi02G011050 vs. ExPASy Swiss-Prot
Match: Q5R761 (U4/U6.U5 tri-snRNP-associated protein 2 OS=Pongo abelii OX=9601 GN=USP39 PE=2 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 6.9e-134
Identity = 258/489 (52.76%), Postives = 331/489 (67.69%), Query Frame = 0


Query: 122 DEEDDEDDANHVKRSR-DVEVRKD--CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLV 181
           DE+ + +     K  R D E R+   CPYLDT+NR VLDFDFEK CS+S S++N YACLV
Sbjct: 79  DEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDFEKLCSISPSHVNAYACLV 138

Query: 182 CGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLDDIRYVLNPRFA 241
           CGKY+QGRG KSHAY HS++  HHV++NL T K YCLPD YEI D SL+DI YVL P F 
Sbjct: 139 CGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFT 198

Query: 242 KEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPEN 301
           K+Q+  LDK  + SRA DG+ YLPG+VGLNNIK  D+ N  +Q+L  V PLRN+FL  +N
Sbjct: 199 KQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDN 258

Query: 302 YQHCRSP-------LVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKTSKKRFRIGAQSD 361
           Y++ + P       LV RFGEL RK+W+ RNFK  VSPHE LQAV+  SKK F+I  Q D
Sbjct: 259 YKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGD 318

Query: 362 PVEFMSWFLNTLHSELRIT-KKSSSIIYECFQGELEVV--KEIHSKALAEKKE----NGD 421
            V+F+SWFLN LHS L  T KK  +I+ + FQG + +   K  H    AE+KE    N +
Sbjct: 319 GVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHNDE 378

Query: 422 DQDAVTEGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETIT 481
            Q+ + E +          F+ L LDLP  PL+KD  E+ IIPQVPLFNIL KF+G T  
Sbjct: 379 YQETMVEST----------FMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEK 438

Query: 482 EVVRPRIARM-RYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 541
           E    +   + R+++T+LP YLI  ++RFTKNNFFVEKNPT+VNFP+ N++L++Y+    
Sbjct: 439 EYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEV 498

Query: 542 PKEKEKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQMVALSE 593
               E   + YDLIANIVHDGKP+EG YR+ V       WYE+QDL V++ LPQM+ LSE
Sbjct: 499 QAVHE--NTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSE 555

[Close]

BLAST of Lsi02G011050 vs. ExPASy Swiss-Prot
Match: Q9USR2 (Probable mRNA-splicing protein ubp10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ubp10 PE=3 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.0e-101
Identity = 216/506 (42.69%), Postives = 304/506 (60.08%), Query Frame = 0


Query: 100 EEDYKFKQNGSRYDGDEGDGNDDEEDDEDDANHVKRSRDVEVRKDCP------YLDTVNR 159
           EED     NG R   + G    D ED  D A     S+++E  +  P      YLDT+NR
Sbjct: 16  EEDNNI-DNGKRKKLELG---KDMEDVHDIA-----SKEMEEHETTPIISQNLYLDTINR 75

Query: 160 QVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVY 219
           ++LDFDFEK CSVSL+NL+VYACLVCG+Y+QGRG  SHAY H+L   HHV++N  T K Y
Sbjct: 76  KLLDFDFEKVCSVSLTNLSVYACLVCGRYFQGRGPSSHAYFHALTENHHVFVNCSTLKFY 135

Query: 220 CLPDGYEINDPSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKET 279
            LP+ Y++   +L DI YV+ P F K +V++LD   Q S  L    Y+PG VG+NNIK  
Sbjct: 136 VLPESYQVESSALQDIAYVMRPTFTKLEVQRLDHTPQLSYDLMLKPYVPGFVGMNNIKNN 195

Query: 280 DFVNVTIQSLMRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFL 339
           D+ NV I  L  V P RN+FL+ +N+ +C   LV R   L RK+W+ + FK  VSP E +
Sbjct: 196 DYFNVVIHMLAHVKPFRNYFLL-KNFDNC-PQLVQRLAILIRKLWNHKAFKSHVSPQELI 255

Query: 340 QAVMKTSKKRFRIGAQSDPVEFMSWFLNTLHSELRITK----KSSSIIYECFQGELEVVK 399
           Q V   S K++ I  Q DPVEF+SWFLNTLH+ L   K    K +SI++  FQG +    
Sbjct: 256 QEVTVLSHKKYSINEQKDPVEFLSWFLNTLHNCLGGKKSTIAKPTSIVHYSFQGFV---- 315

Query: 400 EIHSKALAEKKENGDDQDAVTEGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQV 459
            I S+ + +  E G  +  V  G  VI +T+ +PFL L LDLPP P+F+D  E NIIPQV
Sbjct: 316 RIESQKIRQHAEKG--EQVVFTGDRVI-QTNVVPFLYLTLDLPPKPIFQDEFEGNIIPQV 375

Query: 460 PLFNILKKFDGETITEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFP 519
            L  IL K++G    E+      R R+ +   P Y I H++RF KNN+F E+N T+V FP
Sbjct: 376 ELKEILNKYNGVHTQELAG---MRRRFHLMTAPPYFIFHIKRFMKNNYFTERNQTIVTFP 435

Query: 520 VKNLELKDYIPLPTPKEKEKLRSKYDLIANIVHD----GKPNEGYYRVFVQRKSEELWYE 579
           + + ++  +I     +   K+ +KY+L+ANI+H+     +     +R+ ++  S   WY+
Sbjct: 436 LDDFDMSPFIDDSFIQSNPKISTKYNLVANIIHESVTHAEEEFHNFRIQIRNPSTNKWYQ 495

Query: 580 MQDLHVSETLPQMVALSEAYMQIYER 592
           +QDL+V E    M+ L E+++Q++ER
Sbjct: 496 IQDLYVEEISSDMIRLGESFIQLWER 500

[Close]

BLAST of Lsi02G011050 vs. ExPASy Swiss-Prot
Match: P43589 (Pre-mRNA-splicing factor SAD1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SAD1 PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.1e-43
Identity = 144/497 (28.97%), Postives = 234/497 (47.08%), Query Frame = 0


Query: 116 EGDGNDDEEDDEDDANHVKRSRDVEVRKDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYA 175
           E D      +DE     VK+ +  E   +  YL+TV R+ LDFD EK C ++LS LNVY 
Sbjct: 2   EVDNKRRHSEDELKQEAVKKIKSQE--PNYAYLETVVREKLDFDSEKICCITLSPLNVYC 61

Query: 176 CLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPS----LDDIRY 235
           CLVCG YYQGR +KS A+ HS++  HHV++NL + K Y LP   +I        L+ I++
Sbjct: 62  CLVCGHYYQGRHEKSPAFIHSIDENHHVFLNLTSLKFYMLPQNVQILHDGEVQLLNSIKF 121

Query: 236 VLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRN 295
              P +  + +E   +       L    YL G +G  N    D+ +  +  +  + P+R+
Sbjct: 122 AAYPTYCPKDLEDFPRQ---CFDLSNRTYLNGFIGFTNAATYDYAHSVLLLISHMVPVRD 181

Query: 296 FFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKTSKKRFRIGAQSD 355
            FL+  N+   +   + R     +KIW  + FK  +S  +F+      S  + R G   +
Sbjct: 182 HFLL--NHFDNQGEFIKRLSICVKKIWSPKLFKHHLSVDDFV------SYLKVREGLNLN 241

Query: 356 PVE---FMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSKALAEKKENGDDQDA 415
           P++   F+ W  N + S     K   SI+    +G++++ K + +K  A +   G     
Sbjct: 242 PIDPRLFLLWLFNKICSSSNDLK---SILNHSCKGKVKIAK-VENKPEASESVTG----- 301

Query: 416 VTEGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETITEVVR 475
                 VI++    PF +L LDLP    F+D    + +PQ+ +  +L KF         R
Sbjct: 302 -----KVIVK----PFWVLTLDLPEFSPFEDGNSVDDLPQINITKLLTKFTKS------R 361

Query: 476 PRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKEKE 535
                  + +TRLPQ+LI H  RF +N+          + PVKN   ++   +    E E
Sbjct: 362 SSSTSTVFELTRLPQFLIFHFNRFDRNS----------DHPVKN---RNQTLVEFSSELE 421

Query: 536 KLRSKYDLIANIVH--------DGKPNEG----YYRVFVQRKSEELWYEMQDLHVSETLP 594
            L  KY L AN+VH        DG    G    ++   +     E W E+  ++ +E   
Sbjct: 422 ILHVKYRLKANVVHVVIKQPSTDGNAFNGDEKSHWITQLYDNKSEKWIEIDGINTTEREA 448

[Close]

BLAST of Lsi02G011050 vs. ExPASy TrEMBL
Match: A0A0A0LTF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G185102 PE=4 SV=1)

HSP 1 Score: 1060.4 bits (2741), Expect = 2.7e-306
Identity = 529/550 (96.18%), Postives = 538/550 (97.82%), Query Frame = 0


Query: 47  MGSKRRNNSLLDEEELGPDLKRHKLLGEVSPSSSPPASENPQLPGFNYGDDDEEEDYKFK 106
           MGSKRR+NSLLDEEELGPDLKRHKLLGEVSPSSSPPASENPQLPGFNYGDDDEEED+KFK
Sbjct: 1   MGSKRRSNSLLDEEELGPDLKRHKLLGEVSPSSSPPASENPQLPGFNYGDDDEEEDFKFK 60

Query: 107 QNGSRYDGDEGDGNDDEEDDED---DANHVKRSRDVEVRKDCPYLDTVNRQVLDFDFEKF 166
           QNGS+YDGDEGD NDDEEDDE+   + N VKRSRDVEVRKDCPYLDTVNRQVLDFDFEKF
Sbjct: 61  QNGSKYDGDEGDYNDDEEDDEEYDNNGNQVKRSRDVEVRKDCPYLDTVNRQVLDFDFEKF 120

Query: 167 CSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIND 226
           CSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIND
Sbjct: 121 CSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIND 180

Query: 227 PSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSL 286
           PSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSL
Sbjct: 181 PSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSL 240

Query: 287 MRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKTSKKR 346
           MRVTPLRNFFLIP NYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMK SKKR
Sbjct: 241 MRVTPLRNFFLIPANYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKR 300

Query: 347 FRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSKALAEKKENG 406
           FRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSKAL EKKENG
Sbjct: 301 FRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSKALIEKKENG 360

Query: 407 DDQDAVTEGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETI 466
           ++QDA TEGSSV METSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETI
Sbjct: 361 EEQDAGTEGSSVAMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETI 420

Query: 467 TEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 526
           TEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT
Sbjct: 421 TEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 480

Query: 527 PKEKEKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQMVALSE 586
           PK+ +KLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQMVALSE
Sbjct: 481 PKDNDKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQMVALSE 540

Query: 587 AYMQIYERQQ 594
           AYMQIYERQQ
Sbjct: 541 AYMQIYERQQ 550

[Close]

BLAST of Lsi02G011050 vs. ExPASy TrEMBL
Match: A0A1S3CJP7 (U4/U6.U5 tri-snRNP-associated protein 2-like OS=Cucumis melo OX=3656 GN=LOC103501728 PE=4 SV=1)

HSP 1 Score: 1059.3 bits (2738), Expect = 5.9e-306
Identity = 528/550 (96.00%), Postives = 536/550 (97.45%), Query Frame = 0


Query: 47  MGSKRRNNSLLDEEELGPDLKRHKLLGEVSPSSSPPASENPQLPGFNYGDDDEEEDYKFK 106
           MGSKRRNNSLLDEEELGPDLKRHKLLGEVSPSSSPPASENPQLPGFNYGDDDEEED+KFK
Sbjct: 1   MGSKRRNNSLLDEEELGPDLKRHKLLGEVSPSSSPPASENPQLPGFNYGDDDEEEDFKFK 60

Query: 107 QNGSRYDGDEGDGNDDEEDDE---DDANHVKRSRDVEVRKDCPYLDTVNRQVLDFDFEKF 166
           QNGS+YD DEGD NDDEEDDE   D  N VKRSRDVEVRKDCPYLDTVNRQVLDFDFEKF
Sbjct: 61  QNGSKYDADEGDYNDDEEDDEEHDDHGNQVKRSRDVEVRKDCPYLDTVNRQVLDFDFEKF 120

Query: 167 CSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIND 226
           CSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIND
Sbjct: 121 CSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIND 180

Query: 227 PSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSL 286
           PSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSL
Sbjct: 181 PSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSL 240

Query: 287 MRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKTSKKR 346
           MRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMK SKKR
Sbjct: 241 MRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKR 300

Query: 347 FRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSKALAEKKENG 406
           FRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSKAL EKKENG
Sbjct: 301 FRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSKALIEKKENG 360

Query: 407 DDQDAVTEGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETI 466
           D+QDA T+GSSV+METSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETI
Sbjct: 361 DEQDAGTQGSSVVMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETI 420

Query: 467 TEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 526
           TEVVRP IARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT
Sbjct: 421 TEVVRPHIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 480

Query: 527 PKEKEKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQMVALSE 586
           PK+ +KLRSKYDLIAN+VHDGKPNEG YRVFVQRKSEELWYEMQDLHVSETLPQMVALSE
Sbjct: 481 PKDNDKLRSKYDLIANVVHDGKPNEGCYRVFVQRKSEELWYEMQDLHVSETLPQMVALSE 540

Query: 587 AYMQIYERQQ 594
           AYMQIYERQQ
Sbjct: 541 AYMQIYERQQ 550

[Close]

BLAST of Lsi02G011050 vs. ExPASy TrEMBL
Match: A0A6J1EKT5 (U4/U6.U5 tri-snRNP-associated protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111434213 PE=4 SV=1)

HSP 1 Score: 1050.4 bits (2715), Expect = 2.8e-303
Identity = 525/547 (95.98%), Postives = 534/547 (97.62%), Query Frame = 0


Query: 47  MGSKRRNNSLLDEEELGPDLKRHKLLGEVSPSSSPPASENPQLPGFNYGDDDEEEDYKFK 106
           MGSKR+N+S++DEEELGPDLKRHK LGE SP SSPPASENPQLPGFNYGDDDEEEDYK K
Sbjct: 1   MGSKRQNDSVVDEEELGPDLKRHKSLGESSP-SSPPASENPQLPGFNYGDDDEEEDYKSK 60

Query: 107 QNGSRYDGDEGDGNDDEEDDEDDANHVKRSRDVEVRKDCPYLDTVNRQVLDFDFEKFCSV 166
           QNGS YDGDEGDG DDEE+DED+ NH+ RSRDVEVRKDCPYLDTVNRQVLDFDFEKFCSV
Sbjct: 61  QNGSGYDGDEGDGTDDEENDEDE-NHIMRSRDVEVRKDCPYLDTVNRQVLDFDFEKFCSV 120

Query: 167 SLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSL 226
           SLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSL
Sbjct: 121 SLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSL 180

Query: 227 DDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSLMRV 286
           DDIRYVLNPRFAKEQVEQLDK KQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSLMRV
Sbjct: 181 DDIRYVLNPRFAKEQVEQLDKKKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSLMRV 240

Query: 287 TPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKTSKKRFRI 346
           TPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMK SKKRFRI
Sbjct: 241 TPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 300

Query: 347 GAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSKALAEKKENGDDQ 406
           GAQSDPVEFMSWFLNTLHSELR++KKSSSIIYECFQGELEVVKEIHSKAL EKKENGDDQ
Sbjct: 301 GAQSDPVEFMSWFLNTLHSELRVSKKSSSIIYECFQGELEVVKEIHSKALTEKKENGDDQ 360

Query: 407 DAVTEGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETITEV 466
           DA TEGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETITEV
Sbjct: 361 DAGTEGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETITEV 420

Query: 467 VRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKE 526
           VRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKE
Sbjct: 421 VRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKE 480

Query: 527 KEKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQMVALSEAYM 586
            EKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQMVALSEAYM
Sbjct: 481 SEKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQMVALSEAYM 540

Query: 587 QIYERQQ 594
           QIYERQQ
Sbjct: 541 QIYERQQ 545

[Close]

BLAST of Lsi02G011050 vs. ExPASy TrEMBL
Match: A0A6J1KIZ3 (U4/U6.U5 tri-snRNP-associated protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111495660 PE=4 SV=1)

HSP 1 Score: 1046.6 bits (2705), Expect = 4.0e-302
Identity = 523/547 (95.61%), Postives = 534/547 (97.62%), Query Frame = 0


Query: 47  MGSKRRNNSLLDEEELGPDLKRHKLLGEVSPSSSPPASENPQLPGFNYGDDDEEEDYKFK 106
           MGSKR+N+S++DEEELGPDLKRHK LGE+SP SSPPASENPQLPGFNYGDDDEEEDYK K
Sbjct: 1   MGSKRQNDSVVDEEELGPDLKRHKSLGELSP-SSPPASENPQLPGFNYGDDDEEEDYKSK 60

Query: 107 QNGSRYDGDEGDGNDDEEDDEDDANHVKRSRDVEVRKDCPYLDTVNRQVLDFDFEKFCSV 166
           QNGS YDGDEGD  DDEE+DED+ NH+ RSRDVEVRKDCPYLDTVNRQVLDFDFEKFCSV
Sbjct: 61  QNGSGYDGDEGDVTDDEENDEDE-NHIMRSRDVEVRKDCPYLDTVNRQVLDFDFEKFCSV 120

Query: 167 SLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSL 226
           SLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSL
Sbjct: 121 SLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSL 180

Query: 227 DDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSLMRV 286
           DDIRYVLNPRFAKEQVEQLDK KQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSLMRV
Sbjct: 181 DDIRYVLNPRFAKEQVEQLDKKKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSLMRV 240

Query: 287 TPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKTSKKRFRI 346
           TPLRNFFLIP+NYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMK SKKRFRI
Sbjct: 241 TPLRNFFLIPKNYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 300

Query: 347 GAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSKALAEKKENGDDQ 406
           GAQSDPVEFMSWFLNTLHSELR++KKSSSIIYECFQGELEVVKEIHSKAL EKKENGDDQ
Sbjct: 301 GAQSDPVEFMSWFLNTLHSELRVSKKSSSIIYECFQGELEVVKEIHSKALTEKKENGDDQ 360

Query: 407 DAVTEGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETITEV 466
           DA TEGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETITEV
Sbjct: 361 DAGTEGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETITEV 420

Query: 467 VRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKE 526
           VRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKE
Sbjct: 421 VRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKE 480

Query: 527 KEKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQMVALSEAYM 586
            EKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQMVALSEAYM
Sbjct: 481 SEKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQMVALSEAYM 540

Query: 587 QIYERQQ 594
           QIYERQQ
Sbjct: 541 QIYERQQ 545

[Close]

BLAST of Lsi02G011050 vs. ExPASy TrEMBL
Match: A0A6J1CND9 (U4/U6.U5 tri-snRNP-associated protein 2-like OS=Momordica charantia OX=3673 GN=LOC111012606 PE=4 SV=1)

HSP 1 Score: 1037.3 bits (2681), Expect = 2.4e-299
Identity = 518/549 (94.35%), Postives = 530/549 (96.54%), Query Frame = 0


Query: 47  MGSKRRNNSLLDEEELGPDLKRHKLLGEVSPSSSPPASENPQLPGFNYGDDDEEEDYKFK 106
           MGSKRR+++ +DEEEL P++KR KLLGE SPSS PPASENP+LPGFNYGDDDEEEDYKFK
Sbjct: 1   MGSKRRDDNAVDEEELAPEIKRQKLLGEFSPSSPPPASENPRLPGFNYGDDDEEEDYKFK 60

Query: 107 QNGSRYDGDEGDGNDDEEDDE--DDANHVKRSRDVEVRKDCPYLDTVNRQVLDFDFEKFC 166
           QNGSR  GD GD NDDEEDDE  DDANHVKRSRDVEVRKDCPYLDTVNRQVLDFDFEKFC
Sbjct: 61  QNGSRNGGDGGDDNDDEEDDEYDDDANHVKRSRDVEVRKDCPYLDTVNRQVLDFDFEKFC 120

Query: 167 SVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDP 226
           SVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDP
Sbjct: 121 SVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDP 180

Query: 227 SLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSLM 286
           SLDDIRYVLNPRF KEQVE LDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSLM
Sbjct: 181 SLDDIRYVLNPRFTKEQVELLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSLM 240

Query: 287 RVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKTSKKRF 346
           RVTPLRNFFLIPENYQHC+SPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMK SKKRF
Sbjct: 241 RVTPLRNFFLIPENYQHCKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRF 300

Query: 347 RIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSKALAEKKENGD 406
           RIGAQSDPVEFMSWFLNTLHSELR++KKSSSIIYECFQGELEVVKEIHSKAL EKKENGD
Sbjct: 301 RIGAQSDPVEFMSWFLNTLHSELRMSKKSSSIIYECFQGELEVVKEIHSKALTEKKENGD 360

Query: 407 DQDAVTEGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETIT 466
           DQDA +EGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE IT
Sbjct: 361 DQDAGSEGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGEAIT 420

Query: 467 EVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTP 526
           EVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTP
Sbjct: 421 EVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTP 480

Query: 527 KEKEKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQMVALSEA 586
           KE EKLRSKYDLIANIVHDGKP+EG YRVFVQRKSEELWYEMQDLHVSETLPQMVALSEA
Sbjct: 481 KENEKLRSKYDLIANIVHDGKPDEGCYRVFVQRKSEELWYEMQDLHVSETLPQMVALSEA 540

Query: 587 YMQIYERQQ 594
           YMQIYERQQ
Sbjct: 541 YMQIYERQQ 549

[Close]

BLAST of Lsi02G011050 vs. NCBI nr
Match: XP_038894254.1 (U4/U6.U5 tri-snRNP-associated protein 2-like isoform X1 [Benincasa hispida] >XP_038894255.1 U4/U6.U5 tri-snRNP-associated protein 2-like isoform X1 [Benincasa hispida])

HSP 1 Score: 1087.4 bits (2811), Expect = 0.0e+00
Identity = 549/575 (95.48%), Postives = 556/575 (96.70%), Query Frame = 0


Query: 22  IGVKLYIFRSFINLLYYQREKRVDRMGSKRRNNSLLDEEELGPDLKRHKLLGEVSPSSSP 81
           I VK  IF  F+  +  +REKRVDRMGSKRRNNSLLDEEELGPDLKRHKLLGEVSP SSP
Sbjct: 22  IKVKNVIFLIFVVGVNQEREKRVDRMGSKRRNNSLLDEEELGPDLKRHKLLGEVSP-SSP 81

Query: 82  PASENPQLPGFNYGDDDEEEDYKFKQNGSRYDGDEGDGNDDEEDDE---DDANHVKRSRD 141
           PASENPQLPGFNYGDD+EEE+YKFKQNGSRYDGDEGD NDDEEDDE   DDANHVKRSRD
Sbjct: 82  PASENPQLPGFNYGDDEEEEEYKFKQNGSRYDGDEGDDNDDEEDDEEHDDDANHVKRSRD 141

Query: 142 VEVRKDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLE 201
           VEVRKDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLE
Sbjct: 142 VEVRKDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLE 201

Query: 202 AGHHVYINLRTEKVYCLPDGYEINDPSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGS 261
           AGHHVYINLRTEKVYCLPDGYEINDPSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGS
Sbjct: 202 AGHHVYINLRTEKVYCLPDGYEINDPSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGS 261

Query: 262 DYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIW 321
           DYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIW
Sbjct: 262 DYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIW 321

Query: 322 HARNFKGQVSPHEFLQAVMKTSKKRFRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIY 381
           HARNFKGQVSPHEFLQAVMK SKKRFRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIY
Sbjct: 322 HARNFKGQVSPHEFLQAVMKASKKRFRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIY 381

Query: 382 ECFQGELEVVKEIHSKALAEKKENGDDQDAVTEGSSVIMETSRMPFLMLGLDLPPPPLFK 441
           ECFQGELEVVKEIHSKALAEKKENGDDQDA TE SSV+METSRMPFLMLGLDLPPPPLFK
Sbjct: 382 ECFQGELEVVKEIHSKALAEKKENGDDQDAGTEDSSVVMETSRMPFLMLGLDLPPPPLFK 441

Query: 442 DVMEKNIIPQVPLFNILKKFDGETITEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFF 501
           DVMEKNIIPQVPLFNILKKFDGETITEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFF
Sbjct: 442 DVMEKNIIPQVPLFNILKKFDGETITEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFF 501

Query: 502 VEKNPTLVNFPVKNLELKDYIPLPTPKEKEKLRSKYDLIANIVHDGKPNEGYYRVFVQRK 561
           VEKNPTLVNFPVKNLELKDYIPLPTPK+ EKL SKYDLIANIVHDGKPNEGYYRVFVQRK
Sbjct: 502 VEKNPTLVNFPVKNLELKDYIPLPTPKDNEKLCSKYDLIANIVHDGKPNEGYYRVFVQRK 561

Query: 562 SEELWYEMQDLHVSETLPQMVALSEAYMQIYERQQ 594
           SEELWYEMQDLHVSETLPQMVALSEAYMQIYERQQ
Sbjct: 562 SEELWYEMQDLHVSETLPQMVALSEAYMQIYERQQ 595

[Close]

BLAST of Lsi02G011050 vs. NCBI nr
Match: XP_038894256.1 (U4/U6.U5 tri-snRNP-associated protein 2-like isoform X2 [Benincasa hispida] >XP_038894257.1 U4/U6.U5 tri-snRNP-associated protein 2-like isoform X2 [Benincasa hispida])

HSP 1 Score: 1068.9 bits (2763), Expect = 1.5e-308
Identity = 536/550 (97.45%), Postives = 540/550 (98.18%), Query Frame = 0


Query: 47  MGSKRRNNSLLDEEELGPDLKRHKLLGEVSPSSSPPASENPQLPGFNYGDDDEEEDYKFK 106
           MGSKRRNNSLLDEEELGPDLKRHKLLGEVSP SSPPASENPQLPGFNYGDD+EEE+YKFK
Sbjct: 1   MGSKRRNNSLLDEEELGPDLKRHKLLGEVSP-SSPPASENPQLPGFNYGDDEEEEEYKFK 60

Query: 107 QNGSRYDGDEGDGNDDEEDDE---DDANHVKRSRDVEVRKDCPYLDTVNRQVLDFDFEKF 166
           QNGSRYDGDEGD NDDEEDDE   DDANHVKRSRDVEVRKDCPYLDTVNRQVLDFDFEKF
Sbjct: 61  QNGSRYDGDEGDDNDDEEDDEEHDDDANHVKRSRDVEVRKDCPYLDTVNRQVLDFDFEKF 120

Query: 167 CSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIND 226
           CSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIND
Sbjct: 121 CSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIND 180

Query: 227 PSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSL 286
           PSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSL
Sbjct: 181 PSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSL 240

Query: 287 MRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKTSKKR 346
           MRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMK SKKR
Sbjct: 241 MRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKR 300

Query: 347 FRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSKALAEKKENG 406
           FRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSKALAEKKENG
Sbjct: 301 FRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSKALAEKKENG 360

Query: 407 DDQDAVTEGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETI 466
           DDQDA TE SSV+METSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETI
Sbjct: 361 DDQDAGTEDSSVVMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETI 420

Query: 467 TEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 526
           TEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT
Sbjct: 421 TEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 480

Query: 527 PKEKEKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQMVALSE 586
           PK+ EKL SKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQMVALSE
Sbjct: 481 PKDNEKLCSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQMVALSE 540

Query: 587 AYMQIYERQQ 594
           AYMQIYERQQ
Sbjct: 541 AYMQIYERQQ 549

[Close]

BLAST of Lsi02G011050 vs. NCBI nr
Match: KAG6583754.1 (U4/U6.U5 tri-snRNP-associated protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1062.0 bits (2745), Expect = 1.9e-306
Identity = 531/556 (95.50%), Postives = 541/556 (97.30%), Query Frame = 0


Query: 38  YQREKRVDRMGSKRRNNSLLDEEELGPDLKRHKLLGEVSPSSSPPASENPQLPGFNYGDD 97
           +QR KR DRMGSKR+N+S++DEEELGPDLKRHK LGE SP SSPPASENPQLPGFNYGDD
Sbjct: 10  FQRRKRDDRMGSKRQNDSVVDEEELGPDLKRHKSLGESSP-SSPPASENPQLPGFNYGDD 69

Query: 98  DEEEDYKFKQNGSRYDGDEGDGNDDEEDDEDDANHVKRSRDVEVRKDCPYLDTVNRQVLD 157
           DEEEDYK KQNGS YDGDEGDG DDEE+DED+ NH+ RSRDVEVRKDCPYLDTVNRQVLD
Sbjct: 70  DEEEDYKSKQNGSGYDGDEGDGTDDEENDEDE-NHIMRSRDVEVRKDCPYLDTVNRQVLD 129

Query: 158 FDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPD 217
           FDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPD
Sbjct: 130 FDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPD 189

Query: 218 GYEINDPSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVN 277
           GYEINDPSLDDIRYVLNPRFAKEQVEQLDK KQWSRALDGSDYLPGMVGLNNIKETDFVN
Sbjct: 190 GYEINDPSLDDIRYVLNPRFAKEQVEQLDKKKQWSRALDGSDYLPGMVGLNNIKETDFVN 249

Query: 278 VTIQSLMRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVM 337
           VTIQSLMRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVM
Sbjct: 250 VTIQSLMRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVM 309

Query: 338 KTSKKRFRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSKALA 397
           K SKKRFRIGAQSDPVEFMSWFLNTLHSELR++KKSSSIIYECFQGELEVVKEIHSKAL 
Sbjct: 310 KASKKRFRIGAQSDPVEFMSWFLNTLHSELRVSKKSSSIIYECFQGELEVVKEIHSKALT 369

Query: 398 EKKENGDDQDAVTEGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKK 457
           EKKENGDDQDA TEGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKK
Sbjct: 370 EKKENGDDQDAGTEGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKK 429

Query: 458 FDGETITEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 517
           FDGETITEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD
Sbjct: 430 FDGETITEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKD 489

Query: 518 YIPLPTPKEKEKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQ 577
           YIPLPTPKE EKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQ
Sbjct: 490 YIPLPTPKESEKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQ 549

Query: 578 MVALSEAYMQIYERQQ 594
           MVALSEAYMQIYERQQ
Sbjct: 550 MVALSEAYMQIYERQQ 563

[Close]

BLAST of Lsi02G011050 vs. NCBI nr
Match: XP_011655023.1 (U4/U6.U5 tri-snRNP-associated protein 2 [Cucumis sativus] >KGN65053.1 hypothetical protein Csa_013002 [Cucumis sativus])

HSP 1 Score: 1060.4 bits (2741), Expect = 5.5e-306
Identity = 529/550 (96.18%), Postives = 538/550 (97.82%), Query Frame = 0


Query: 47  MGSKRRNNSLLDEEELGPDLKRHKLLGEVSPSSSPPASENPQLPGFNYGDDDEEEDYKFK 106
           MGSKRR+NSLLDEEELGPDLKRHKLLGEVSPSSSPPASENPQLPGFNYGDDDEEED+KFK
Sbjct: 1   MGSKRRSNSLLDEEELGPDLKRHKLLGEVSPSSSPPASENPQLPGFNYGDDDEEEDFKFK 60

Query: 107 QNGSRYDGDEGDGNDDEEDDED---DANHVKRSRDVEVRKDCPYLDTVNRQVLDFDFEKF 166
           QNGS+YDGDEGD NDDEEDDE+   + N VKRSRDVEVRKDCPYLDTVNRQVLDFDFEKF
Sbjct: 61  QNGSKYDGDEGDYNDDEEDDEEYDNNGNQVKRSRDVEVRKDCPYLDTVNRQVLDFDFEKF 120

Query: 167 CSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIND 226
           CSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIND
Sbjct: 121 CSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIND 180

Query: 227 PSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSL 286
           PSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSL
Sbjct: 181 PSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSL 240

Query: 287 MRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKTSKKR 346
           MRVTPLRNFFLIP NYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMK SKKR
Sbjct: 241 MRVTPLRNFFLIPANYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKR 300

Query: 347 FRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSKALAEKKENG 406
           FRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSKAL EKKENG
Sbjct: 301 FRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSKALIEKKENG 360

Query: 407 DDQDAVTEGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETI 466
           ++QDA TEGSSV METSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETI
Sbjct: 361 EEQDAGTEGSSVAMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETI 420

Query: 467 TEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 526
           TEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT
Sbjct: 421 TEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 480

Query: 527 PKEKEKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQMVALSE 586
           PK+ +KLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQMVALSE
Sbjct: 481 PKDNDKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQMVALSE 540

Query: 587 AYMQIYERQQ 594
           AYMQIYERQQ
Sbjct: 541 AYMQIYERQQ 550

[Close]

BLAST of Lsi02G011050 vs. NCBI nr
Match: XP_008463627.1 (PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Cucumis melo] >XP_008463628.1 PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Cucumis melo] >XP_008463629.1 PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Cucumis melo] >XP_008463630.1 PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Cucumis melo])

HSP 1 Score: 1059.3 bits (2738), Expect = 1.2e-305
Identity = 528/550 (96.00%), Postives = 536/550 (97.45%), Query Frame = 0


Query: 47  MGSKRRNNSLLDEEELGPDLKRHKLLGEVSPSSSPPASENPQLPGFNYGDDDEEEDYKFK 106
           MGSKRRNNSLLDEEELGPDLKRHKLLGEVSPSSSPPASENPQLPGFNYGDDDEEED+KFK
Sbjct: 1   MGSKRRNNSLLDEEELGPDLKRHKLLGEVSPSSSPPASENPQLPGFNYGDDDEEEDFKFK 60

Query: 107 QNGSRYDGDEGDGNDDEEDDE---DDANHVKRSRDVEVRKDCPYLDTVNRQVLDFDFEKF 166
           QNGS+YD DEGD NDDEEDDE   D  N VKRSRDVEVRKDCPYLDTVNRQVLDFDFEKF
Sbjct: 61  QNGSKYDADEGDYNDDEEDDEEHDDHGNQVKRSRDVEVRKDCPYLDTVNRQVLDFDFEKF 120

Query: 167 CSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIND 226
           CSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIND
Sbjct: 121 CSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIND 180

Query: 227 PSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSL 286
           PSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSL
Sbjct: 181 PSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSL 240

Query: 287 MRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKTSKKR 346
           MRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMK SKKR
Sbjct: 241 MRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKR 300

Query: 347 FRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSKALAEKKENG 406
           FRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSKAL EKKENG
Sbjct: 301 FRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSKALIEKKENG 360

Query: 407 DDQDAVTEGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETI 466
           D+QDA T+GSSV+METSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETI
Sbjct: 361 DEQDAGTQGSSVVMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETI 420

Query: 467 TEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 526
           TEVVRP IARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT
Sbjct: 421 TEVVRPHIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT 480

Query: 527 PKEKEKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQMVALSE 586
           PK+ +KLRSKYDLIAN+VHDGKPNEG YRVFVQRKSEELWYEMQDLHVSETLPQMVALSE
Sbjct: 481 PKDNDKLRSKYDLIANVVHDGKPNEGCYRVFVQRKSEELWYEMQDLHVSETLPQMVALSE 540

Query: 587 AYMQIYERQQ 594
           AYMQIYERQQ
Sbjct: 541 AYMQIYERQQ 550

[Close]

BLAST of Lsi02G011050 vs. TAIR 10
Match: AT4G22285.1 (Ubiquitin C-terminal hydrolases superfamily protein )

HSP 1 Score: 766.5 bits (1978), Expect = 1.5e-221
Identity = 402/562 (71.53%), Postives = 458/562 (81.49%), Query Frame = 0


Query: 48  GSKRRNNSLLDEEELGPDLKRHKLLGEVSPSSSPPAS-ENPQLPGFN-YGDDDEEEDYKF 107
           G +   N + +EE    ++KR +++ E S S  PP    NP LP  N Y DDDEEE+ + 
Sbjct: 3   GEREVKNGVSEEER---EVKRKRVM-ERSDSPPPPLGFNNPLLPLANTYDDDDEEEENEQ 62

Query: 108 KQNGSRYDG---DEGDGN----------DDEEDDEDDANHVKRSRDVEVRKDCPYLDTVN 167
           K++ +R +G    EG+GN          DD+EDD+      K SR VEVR+DCPYLDTVN
Sbjct: 63  KKSQARGNGVAKGEGNGNKVKGEAQEEVDDDEDDDVSKGKGKHSRHVEVRRDCPYLDTVN 122

Query: 168 RQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKV 227
           RQVLDFDFE+FCSVSLSNLNVYACLVCGKY+QGR +KSHAYTHSLEAGHHVYINL TEKV
Sbjct: 123 RQVLDFDFERFCSVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTEKV 182

Query: 228 YCLPDGYEINDPSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKE 287
           YCLPD YEINDPSLDDIR+VLNPRF++ QV +LDKN+QWSRALDGSDYLPGMVGLNNI++
Sbjct: 183 YCLPDSYEINDPSLDDIRHVLNPRFSRAQVNELDKNRQWSRALDGSDYLPGMVGLNNIQK 242

Query: 288 TDFVNVTIQSLMRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEF 347
           T+FVNVTIQSLMRVTPLRNFFLIPENYQHC+SPLVHRFGELTRKIWHARNFKGQVSPHEF
Sbjct: 243 TEFVNVTIQSLMRVTPLRNFFLIPENYQHCKSPLVHRFGELTRKIWHARNFKGQVSPHEF 302

Query: 348 LQAVMKTSKKRFRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIH 407
           LQAVMK SKKRFRIG QSDPVEFMSW LNTLH +LR +K +SSII++CFQGELEVVKE  
Sbjct: 303 LQAVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGELEVVKEF- 362

Query: 408 SKALAEKKENGDDQDAVTEGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLF 467
                +  EN               E SRM FLMLGLDLPPPPLFKDVMEKNIIPQV LF
Sbjct: 363 -----QGNEN--------------KEISRMSFLMLGLDLPPPPLFKDVMEKNIIPQVALF 422

Query: 468 NILKKFDGETITEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKN 527
           ++LKKFDGET+TEVVRP++ARMRYRV + P+YL+ HM RF KNNFF EKNPTLVNFPVK+
Sbjct: 423 DLLKKFDGETVTEVVRPKLARMRYRVIKSPRYLMFHMVRFKKNNFFKEKNPTLVNFPVKD 482

Query: 528 LELKDYIP-LPTPKEKEKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHV 587
           +EL+DYIP LP   E E + SKY+LIANIVHDGKP +GY+RVFVQRKS+ELWYEMQDLHV
Sbjct: 483 MELRDYIPSLPRAPEGENVCSKYNLIANIVHDGKPEDGYFRVFVQRKSQELWYEMQDLHV 540

Query: 588 SETLPQMVALSEAYMQIYERQQ 594
           +ETLPQMV LSEAYMQIYE+++
Sbjct: 543 AETLPQMVELSEAYMQIYEQEE 540

[Close]

BLAST of Lsi02G011050 vs. TAIR 10
Match: AT4G22350.2 (Ubiquitin C-terminal hydrolases superfamily protein )

HSP 1 Score: 763.8 bits (1971), Expect = 9.9e-221
Identity = 400/560 (71.43%), Postives = 453/560 (80.89%), Query Frame = 0


Query: 48  GSKRRNNSLLDEEELGPDLKRHKLLGEVSPSSSPPAS-ENPQLPGFNYGDDDEEEDYKFK 107
           G +   N + +EE    ++KR +++ E S S  PP    NP LP  N  DDD  +  K +
Sbjct: 3   GEREVKNGVSEEER---EVKRKRVM-ERSDSPPPPLGFNNPLLPFANAYDDDNNQQNKSQ 62

Query: 108 QNGSRYDGDEGDGN----------DDEEDDEDDAN--HVKRSRDVEVRKDCPYLDTVNRQ 167
              +     EG+GN          DD+EDD+DDA+    K SR VEVR+DCPYLDTVNRQ
Sbjct: 63  TRCNVVAKGEGNGNKVKGEAQVEVDDDEDDDDDASKGRGKHSRHVEVRRDCPYLDTVNRQ 122

Query: 168 VLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYC 227
           VLDFDFE+FCSVSLSNLNVYACLVCGKY+QGR +KSHAYTHSLEAGHHVYINL TEKVYC
Sbjct: 123 VLDFDFERFCSVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTEKVYC 182

Query: 228 LPDGYEINDPSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETD 287
           LPD YEINDPSLDDIR+VLNPRF++ QV +LDKN+QWSRALDGSDYLPGMVGLNNI++T+
Sbjct: 183 LPDSYEINDPSLDDIRHVLNPRFSRAQVNELDKNRQWSRALDGSDYLPGMVGLNNIQKTE 242

Query: 288 FVNVTIQSLMRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQ 347
           FVNVTIQSLMRVTPLRNFFLIPENYQHC+SPL HRFGELTRKIWHARNFKGQVSPHEFLQ
Sbjct: 243 FVNVTIQSLMRVTPLRNFFLIPENYQHCKSPLGHRFGELTRKIWHARNFKGQVSPHEFLQ 302

Query: 348 AVMKTSKKRFRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSK 407
           AVMK SKKRFRIG QSDPVEFMSW LNTLH +LR +K +SSII++CFQGELEVVKE    
Sbjct: 303 AVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGELEVVKEY--- 362

Query: 408 ALAEKKENGDDQDAVTEGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNI 467
              +  EN               E SRMPFLMLGLDLPPPPLFKDVMEKNIIPQV LF++
Sbjct: 363 ---QGNEN--------------KEISRMPFLMLGLDLPPPPLFKDVMEKNIIPQVALFDL 422

Query: 468 LKKFDGETITEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLE 527
           LKKFDGET+TEVVRP++ARMRYRV + P+YL+ HM RF KNNFF EKNPTLVNFPVK++E
Sbjct: 423 LKKFDGETVTEVVRPKLARMRYRVIKSPRYLMFHMVRFKKNNFFKEKNPTLVNFPVKDME 482

Query: 528 LKDYIP-LPTPKEKEKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSE 587
           L+DYIP LP   E E + SKY+LIANIVHDGKP +GY+RVFVQRKS+ELWYEMQDLHV+E
Sbjct: 483 LRDYIPSLPRAPEGENVCSKYNLIANIVHDGKPEDGYFRVFVQRKSQELWYEMQDLHVAE 538

Query: 588 TLPQMVALSEAYMQIYERQQ 594
           TLPQMV LSEAYMQIYE+Q+
Sbjct: 543 TLPQMVELSEAYMQIYEQQE 538

[Close]

BLAST of Lsi02G011050 vs. TAIR 10
Match: AT4G22350.1 (Ubiquitin C-terminal hydrolases superfamily protein )

HSP 1 Score: 754.2 bits (1946), Expect = 7.9e-218
Identity = 380/493 (77.08%), Postives = 425/493 (86.21%), Query Frame = 0


Query: 104 KFKQNGSRYDGDEGDGNDDEEDDEDDAN--HVKRSRDVEVRKDCPYLDTVNRQVLDFDFE 163
           K + NG++  G+     DD+EDD+DDA+    K SR VEVR+DCPYLDTVNRQVLDFDFE
Sbjct: 37  KGEGNGNKVKGEAQVEVDDDEDDDDDASKGRGKHSRHVEVRRDCPYLDTVNRQVLDFDFE 96

Query: 164 KFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI 223
           +FCSVSLSNLNVYACLVCGKY+QGR +KSHAYTHSLEAGHHVYINL TEKVYCLPD YEI
Sbjct: 97  RFCSVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTEKVYCLPDSYEI 156

Query: 224 NDPSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQ 283
           NDPSLDDIR+VLNPRF++ QV +LDKN+QWSRALDGSDYLPGMVGLNNI++T+FVNVTIQ
Sbjct: 157 NDPSLDDIRHVLNPRFSRAQVNELDKNRQWSRALDGSDYLPGMVGLNNIQKTEFVNVTIQ 216

Query: 284 SLMRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKTSK 343
           SLMRVTPLRNFFLIPENYQHC+SPL HRFGELTRKIWHARNFKGQVSPHEFLQAVMK SK
Sbjct: 217 SLMRVTPLRNFFLIPENYQHCKSPLGHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASK 276

Query: 344 KRFRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSKALAEKKE 403
           KRFRIG QSDPVEFMSW LNTLH +LR +K +SSII++CFQGELEVVKE       +  E
Sbjct: 277 KRFRIGQQSDPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGELEVVKEY------QGNE 336

Query: 404 NGDDQDAVTEGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGE 463
           N               E SRMPFLMLGLDLPPPPLFKDVMEKNIIPQV LF++LKKFDGE
Sbjct: 337 N--------------KEISRMPFLMLGLDLPPPPLFKDVMEKNIIPQVALFDLLKKFDGE 396

Query: 464 TITEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIP- 523
           T+TEVVRP++ARMRYRV + P+YL+ HM RF KNNFF EKNPTLVNFPVK++EL+DYIP 
Sbjct: 397 TVTEVVRPKLARMRYRVIKSPRYLMFHMVRFKKNNFFKEKNPTLVNFPVKDMELRDYIPS 456

Query: 524 LPTPKEKEKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQMVA 583
           LP   E E + SKY+LIANIVHDGKP +GY+RVFVQRKS+ELWYEMQDLHV+ETLPQMV 
Sbjct: 457 LPRAPEGENVCSKYNLIANIVHDGKPEDGYFRVFVQRKSQELWYEMQDLHVAETLPQMVE 509

Query: 584 LSEAYMQIYERQQ 594
           LSEAYMQIYE+Q+
Sbjct: 517 LSEAYMQIYEQQE 509

[Close]

BLAST of Lsi02G011050 vs. TAIR 10
Match: AT4G22410.1 (Ubiquitin C-terminal hydrolases superfamily protein )

HSP 1 Score: 569.3 bits (1466), Expect = 3.6e-162
Identity = 280/355 (78.87%), Postives = 306/355 (86.20%), Query Frame = 0


Query: 151 VNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTE 210
           V  QVLDF FE+FCSVSLSNLNVYACLVCGKY+QGR +KSHAYTHSLEAGHHVYINL TE
Sbjct: 2   VEFQVLDFHFERFCSVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTE 61

Query: 211 KVYCLPDGYEINDPSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNI 270
           KVYCLPD YEINDPSLDDIR+VLNPRF++ QV +LDKN+QWSRALDGSDYLPGMVGLNNI
Sbjct: 62  KVYCLPDSYEINDPSLDDIRHVLNPRFSRAQVNELDKNRQWSRALDGSDYLPGMVGLNNI 121

Query: 271 KETDFVNVTIQSLMRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPH 330
           ++T+FVNVTIQSLMRVTPLRNFF IPENYQHC+SPLVH FGELTRKIWHARNFKGQVSPH
Sbjct: 122 QKTEFVNVTIQSLMRVTPLRNFFHIPENYQHCKSPLVHCFGELTRKIWHARNFKGQVSPH 181

Query: 331 EFLQAVMKTSKKRFRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKE 390
           EFLQAVMK SKKRFRIG QSDPVEFMSW LNTLH +LR +K +SSII++CFQGELEVVKE
Sbjct: 182 EFLQAVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGELEVVKE 241

Query: 391 IHSKALAEKKENGDDQDAVTEGSSVIMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVP 450
                  +  EN               E SRM FLMLGLDLPPPPLFKDVMEKNIIPQV 
Sbjct: 242 F------QGNEN--------------KEISRMSFLMLGLDLPPPPLFKDVMEKNIIPQVA 301

Query: 451 LFNILKKFDGETITEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTL 506
           LF++LKKFDGET+TEVVRP++ARMRYRV + P+YL+ HM RF KNNFF EKNPTL
Sbjct: 302 LFDLLKKFDGETVTEVVRPKLARMRYRVIKSPRYLMFHMVRFKKNNFFKEKNPTL 336

[Close]

BLAST of Lsi02G011050 vs. TAIR 10
Match: AT4G22420.1 (Ubiquitin-specific protease family C19-related protein )

HSP 1 Score: 62.4 bits (150), Expect = 1.4e-09
Identity = 57/122 (46.72%), Postives = 69/122 (56.56%), Query Frame = 0


Query: 55  SLLDEEELGPDLKRHKLLGEVSPSSSPPAS-ENPQLPGFN-YGDDDEEEDYKFKQNGSRY 114
           SL+D  E        K + E S S  PP    N  LP  N Y DDDEEE  + K++ +R 
Sbjct: 33  SLIDSPE--------KRVIERSDSPPPPLGFNNHLLPLANAYDDDDEEEGNELKKSQARR 92

Query: 115 DG---DEGDGN----------DDEEDDEDDAN--HVKRSRDVEVRKDCPYLDTVNRQVLD 160
           +G    EG+GN          DDEEDD+DDA+    K SR VEVR+DCPYLDTVNRQV+ 
Sbjct: 93  NGVAKGEGNGNKVNGEAQEEVDDEEDDDDDASKGRGKHSRHVEVRRDCPYLDTVNRQVII 146

The following BLAST results are available for this feature:

BLAST of Lsi02G011050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q53GS9	1.4e-134	52.97	U4/U6.U5 tri-snRNP-associated protein 2 OS=Homo sapiens OX=9606 GN=USP39 PE=1 SV...	[more]
Q3TIX9	1.4e-134	52.97	U4/U6.U5 tri-snRNP-associated protein 2 OS=Mus musculus OX=10090 GN=Usp39 PE=1 S...	[more]
Q5R761	6.9e-134	52.76	U4/U6.U5 tri-snRNP-associated protein 2 OS=Pongo abelii OX=9601 GN=USP39 PE=2 SV...	[more]
Q9USR2	2.0e-101	42.69	Probable mRNA-splicing protein ubp10 OS=Schizosaccharomyces pombe (strain 972 / ...	[more]
P43589	1.1e-43	28.97	Pre-mRNA-splicing factor SAD1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / ...	[more]

BLAST of Lsi02G011050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTF9	2.7e-306	96.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G185102 PE=4 SV=1	[more]
A0A1S3CJP7	5.9e-306	96.00	U4/U6.U5 tri-snRNP-associated protein 2-like OS=Cucumis melo OX=3656 GN=LOC10350...	[more]
A0A6J1EKT5	2.8e-303	95.98	U4/U6.U5 tri-snRNP-associated protein 2-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1KIZ3	4.0e-302	95.61	U4/U6.U5 tri-snRNP-associated protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1CND9	2.4e-299	94.35	U4/U6.U5 tri-snRNP-associated protein 2-like OS=Momordica charantia OX=3673 GN=L...	[more]

BLAST of Lsi02G011050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894254.1	0.0e+00	95.48	U4/U6.U5 tri-snRNP-associated protein 2-like isoform X1 [Benincasa hispida] >XP_...	[more]
XP_038894256.1	1.5e-308	97.45	U4/U6.U5 tri-snRNP-associated protein 2-like isoform X2 [Benincasa hispida] >XP_...	[more]
KAG6583754.1	1.9e-306	95.50	U4/U6.U5 tri-snRNP-associated protein 2, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_011655023.1	5.5e-306	96.18	U4/U6.U5 tri-snRNP-associated protein 2 [Cucumis sativus] >KGN65053.1 hypothetic...	[more]
XP_008463627.1	1.2e-305	96.00	PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Cucumis melo] >XP_00846...	[more]

BLAST of Lsi02G011050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G22285.1	1.5e-221	71.53	Ubiquitin C-terminal hydrolases superfamily protein	[more]
AT4G22350.2	9.9e-221	71.43	Ubiquitin C-terminal hydrolases superfamily protein	[more]
AT4G22350.1	7.9e-218	77.08	Ubiquitin C-terminal hydrolases superfamily protein	[more]
AT4G22410.1	3.6e-162	78.87	Ubiquitin C-terminal hydrolases superfamily protein	[more]
AT4G22420.1	1.4e-09	46.72	Ubiquitin-specific protease family C19-related protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001607	Zinc finger, UBP-type	SMART	SM00290	Zf_UBP_1	coord: 163..212 e-value: 1.6E-18 score: 77.5
IPR001607	Zinc finger, UBP-type	PFAM	PF02148	zf-UBP	coord: 164..225 e-value: 5.2E-14 score: 52.3
IPR001607	Zinc finger, UBP-type	PROSITE	PS50271	ZF_UBP	coord: 162..223 score: 18.232674
IPR001394	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	PFAM	PF00443	UCH	coord: 265..589 e-value: 1.1E-37 score: 130.0
None	No IPR available	GENE3D	3.90.70.10	Cysteine proteinases	coord: 234..593 e-value: 4.9E-93 score: 314.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..135
None	No IPR available	PANTHER	PTHR21646	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	coord: 123..592
None	No IPR available	PANTHER	PTHR21646:SF71	BNAA06G13940D PROTEIN	coord: 123..592
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 143..237
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 145..233 e-value: 1.6E-41 score: 142.1
IPR028889	Ubiquitin specific protease domain	PROSITE	PS50235	USP_3	coord: 265..592 score: 35.55415
IPR033809	USP39	CDD	cd02669	Peptidase_C19M	coord: 146..590 e-value: 0.0 score: 677.115
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 257..591

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G011050.1	Lsi02G011050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016579	protein deubiquitination
biological_process	GO:0000245	spliceosomal complex assembly
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005681	spliceosomal complex
molecular_function	GO:0004843	thiol-dependent deubiquitinase
molecular_function	GO:0008270	zinc ion binding