Lsi02G010880 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi02G010880
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr02: 12281607 .. 12282200 (-)
RNA-Seq ExpressionLsi02G010880
SyntenyLsi02G010880
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAGCTCTACCGGAAAAGAGGAACGGTCCACCCATCGCCGCCGATCATTTCCGACCACCTCTCGTTTCTCCCCACAGCCATCCTCACCCTCGCGGCGGCGCTCTCGCTGGAGGATCGAGAGGTTTTGGCCTACCTCATCTCCTCCTGCTCCAACGAATTCACCACCGTTAACAACTCCTCCAGCCACCGCAGCAAGGCGGCCCACCAGAAACCCACTACCGCCGCAAAAGGCGGTTCCGATCATCCCCCGGCGTTCTCCTGCGACTGTTTCCGGTGCTACACCAGCTACTGGGTCAGATGGGATTCCTCTCCGAATCGGCAACTGATACACGAAATAATCGACGCTTATGAAGAGAAATTGGCTGAAAGCAAATCCGGGAAGAACAATAAGAAAGAGAGGAAGAAGAAGAATAGCGGGTCGGTTTCCGGTCCGGGTGAGGGGAAAGGGTCGGAACCGGCGGCGAAGGAAGAAGAGTCGAGGGTGACGGAAAAGGAGACGGCGGAAAGCGGTGAGGAGGAGGCGGAGAAAGGGTCGGTAAGGAGGATTGTGAGTTTCATAGGGGAAAGAATCTGGGGAGGTTGGAATTAG

mRNA sequence

ATGAAGAAGCTCTACCGGAAAAGAGGAACGGTCCACCCATCGCCGCCGATCATTTCCGACCACCTCTCGTTTCTCCCCACAGCCATCCTCACCCTCGCGGCGGCGCTCTCGCTGGAGGATCGAGAGGTTTTGGCCTACCTCATCTCCTCCTGCTCCAACGAATTCACCACCGTTAACAACTCCTCCAGCCACCGCAGCAAGGCGGCCCACCAGAAACCCACTACCGCCGCAAAAGGCGGTTCCGATCATCCCCCGGCGTTCTCCTGCGACTGTTTCCGGTGCTACACCAGCTACTGGGTCAGATGGGATTCCTCTCCGAATCGGCAACTGATACACGAAATAATCGACGCTTATGAAGAGAAATTGGCTGAAAGCAAATCCGGGAAGAACAATAAGAAAGAGAGGAAGAAGAAGAATAGCGGGTCGGTTTCCGGTCCGGGTGAGGGGAAAGGGTCGGAACCGGCGGCGAAGGAAGAAGAGTCGAGGGTGACGGAAAAGGAGACGGCGGAAAGCGGTGAGGAGGAGGCGGAGAAAGGGTCGGTAAGGAGGATTGTGAGTTTCATAGGGGAAAGAATCTGGGGAGGTTGGAATTAG

Coding sequence (CDS)

ATGAAGAAGCTCTACCGGAAAAGAGGAACGGTCCACCCATCGCCGCCGATCATTTCCGACCACCTCTCGTTTCTCCCCACAGCCATCCTCACCCTCGCGGCGGCGCTCTCGCTGGAGGATCGAGAGGTTTTGGCCTACCTCATCTCCTCCTGCTCCAACGAATTCACCACCGTTAACAACTCCTCCAGCCACCGCAGCAAGGCGGCCCACCAGAAACCCACTACCGCCGCAAAAGGCGGTTCCGATCATCCCCCGGCGTTCTCCTGCGACTGTTTCCGGTGCTACACCAGCTACTGGGTCAGATGGGATTCCTCTCCGAATCGGCAACTGATACACGAAATAATCGACGCTTATGAAGAGAAATTGGCTGAAAGCAAATCCGGGAAGAACAATAAGAAAGAGAGGAAGAAGAAGAATAGCGGGTCGGTTTCCGGTCCGGGTGAGGGGAAAGGGTCGGAACCGGCGGCGAAGGAAGAAGAGTCGAGGGTGACGGAAAAGGAGACGGCGGAAAGCGGTGAGGAGGAGGCGGAGAAAGGGTCGGTAAGGAGGATTGTGAGTTTCATAGGGGAAAGAATCTGGGGAGGTTGGAATTAG

Protein sequence

MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIIDAYEEKLAESKSGKNNKKERKKKNSGSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEAEKGSVRRIVSFIGERIWGGWN
Homology
BLAST of Lsi02G010880 vs. ExPASy TrEMBL
Match: A0A6J1ENT0 (uncharacterized protein LOC111434229 OS=Cucurbita moschata OX=3662 GN=LOC111434229 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.5e-83
Identity = 168/201 (83.58%), Postives = 178/201 (88.56%), Query Frame = 0

Query: 1   MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNN 60
           MKKLYR+RGTVHPSPPIISDHLSFLPTAILTLAAALS EDRE+LAYLISS SN+FTTVNN
Sbjct: 1   MKKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60

Query: 61  SSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIIDAYEE 120
            S HR KAAHQKP  AAK GSDHPP FSCDCFRCYTSYWVRWDSSPNRQ+IHEIIDAYEE
Sbjct: 61  FSGHRGKAAHQKP-AAAKSGSDHPPVFSCDCFRCYTSYWVRWDSSPNRQMIHEIIDAYEE 120

Query: 121 KLAESKSGKNNKKERKKKN----SGSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEA 180
            LAESK+GKNNKKERKK+N    SGSVS PG+GKGSE A K EESRVTE E A+ GE EA
Sbjct: 121 TLAESKAGKNNKKERKKRNTGSGSGSVSSPGDGKGSELAPKVEESRVTEMEAADGGENEA 180

Query: 181 EKGSVRRIVSFIGERIWGGWN 198
           EKGSVR IVS+IGE+IWGGWN
Sbjct: 181 EKGSVRWIVSYIGEKIWGGWN 200

BLAST of Lsi02G010880 vs. ExPASy TrEMBL
Match: A0A0A0LVV3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G196260 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 6.8e-81
Identity = 166/198 (83.84%), Postives = 173/198 (87.37%), Query Frame = 0

Query: 1   MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNN 60
           MKKLYRKRGTVHPSP IISDHLSFLPT ILTLAAALSL DREVLAYLISSCSN+FT V N
Sbjct: 124 MKKLYRKRGTVHPSPLIISDHLSFLPTVILTLAAALSLHDREVLAYLISSCSNDFTAVIN 183

Query: 61  SSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIIDAYEE 120
           SSSHR KA HQK   AA GG DHPPAFSC CF+CYTSYWVRWDSSPNRQLIHEIIDAYEE
Sbjct: 184 SSSHRGKATHQK-HAAAMGGLDHPPAFSCYCFQCYTSYWVRWDSSPNRQLIHEIIDAYEE 243

Query: 121 KLAESKSGKNNKKERKKKNS-GSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEAEKG 180
           KLAESK GKNNKKERKK+N+ G VSGPGEGKGSE A KEEE RVTE+E AE GEE AEKG
Sbjct: 244 KLAESKVGKNNKKERKKRNNRGPVSGPGEGKGSEAATKEEEWRVTEREVAEGGEEGAEKG 303

Query: 181 SVRRIVSFIGERIWGGWN 198
            VRRIVS +GE+IWG WN
Sbjct: 304 PVRRIVSLLGEKIWGSWN 320

BLAST of Lsi02G010880 vs. ExPASy TrEMBL
Match: A0A6J1KLN6 (uncharacterized protein LOC111495687 OS=Cucurbita maxima OX=3661 GN=LOC111495687 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 8.3e-79
Identity = 164/204 (80.39%), Postives = 175/204 (85.78%), Query Frame = 0

Query: 1   MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNN 60
           M KLYR+RGTVHPSPPIISDHLSFLPTAILTLAAALS EDRE+LAYLISS SN+FTTVNN
Sbjct: 1   MNKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60

Query: 61  SSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIIDAYEE 120
            S HR KAA QKP  AAK GSDHPPAFSCDCFRCYTSYWVRWDSSPNRQ+IHEIIDAYEE
Sbjct: 61  FSGHRGKAAQQKP-AAAKSGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQIIHEIIDAYEE 120

Query: 121 KLAESKSGKNNKKERKKKN----SGSVSGPGEGKGSEPAAKEEESRVTEKETAE---SGE 180
            LAESK+GKNNKKERKK+N    SGSVS  G+GKGSE A K EESRVTE E A+    GE
Sbjct: 121 TLAESKAGKNNKKERKKRNTGSGSGSVSSQGDGKGSELAPKVEESRVTEMEAADGGGGGE 180

Query: 181 EEAEKGSVRRIVSFIGERIWGGWN 198
            EAEKG+VR IV +IGE+IWGGWN
Sbjct: 181 NEAEKGTVRWIVRYIGEKIWGGWN 203

BLAST of Lsi02G010880 vs. ExPASy TrEMBL
Match: A0A5D3CKA3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001180 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 7.7e-77
Identity = 157/198 (79.29%), Postives = 173/198 (87.37%), Query Frame = 0

Query: 1   MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNN 60
           MKKLYRK GTVHPSPP+ISDHLSFLPTAILTL++ALSL+DREVLAYLISSCSN+FT V+N
Sbjct: 1   MKKLYRKTGTVHPSPPLISDHLSFLPTAILTLSSALSLQDREVLAYLISSCSNDFTPVHN 60

Query: 61  SSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIIDAYEE 120
           SS+HR KAAH K   A   GSDHPPAFSC CF+CYTSYWVRWDSSPNRQLIHEIIDAYE+
Sbjct: 61  SSTHRGKAAHHK-HAAPMAGSDHPPAFSCYCFQCYTSYWVRWDSSPNRQLIHEIIDAYED 120

Query: 121 KLAESKSGKNNKKERKKKN-SGSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEAEKG 180
           KLAE+K GKNNKKERKK+N SG+VSGPGEGKG+E AAK EE +VT     E GEEEAEKG
Sbjct: 121 KLAETKVGKNNKKERKKRNSSGTVSGPGEGKGAEAAAKVEEWKVT-----EGGEEEAEKG 180

Query: 181 SVRRIVSFIGERIWGGWN 198
            VRRIVS +GE+IWG WN
Sbjct: 181 PVRRIVSLLGEKIWGSWN 192

BLAST of Lsi02G010880 vs. ExPASy TrEMBL
Match: A0A1S3C9P0 (uncharacterized protein LOC103498228 OS=Cucumis melo OX=3656 GN=LOC103498228 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 7.7e-77
Identity = 157/198 (79.29%), Postives = 173/198 (87.37%), Query Frame = 0

Query: 1   MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNN 60
           MKKLYRK GTVHPSPP+ISDHLSFLPTAILTL++ALSL+DREVLAYLISSCSN+FT V+N
Sbjct: 1   MKKLYRKTGTVHPSPPLISDHLSFLPTAILTLSSALSLQDREVLAYLISSCSNDFTPVHN 60

Query: 61  SSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIIDAYEE 120
           SS+HR KAAH K   A   GSDHPPAFSC CF+CYTSYWVRWDSSPNRQLIHEIIDAYE+
Sbjct: 61  SSTHRGKAAHHK-HAAPMAGSDHPPAFSCYCFQCYTSYWVRWDSSPNRQLIHEIIDAYED 120

Query: 121 KLAESKSGKNNKKERKKKN-SGSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEAEKG 180
           KLAE+K GKNNKKERKK+N SG+VSGPGEGKG+E AAK EE +VT     E GEEEAEKG
Sbjct: 121 KLAETKVGKNNKKERKKRNSSGTVSGPGEGKGAEAAAKVEEWKVT-----EGGEEEAEKG 180

Query: 181 SVRRIVSFIGERIWGGWN 198
            VRRIVS +GE+IWG WN
Sbjct: 181 PVRRIVSLLGEKIWGSWN 192

BLAST of Lsi02G010880 vs. NCBI nr
Match: XP_038894832.1 (uncharacterized protein LOC120083238 [Benincasa hispida])

HSP 1 Score: 351.3 bits (900), Expect = 5.5e-93
Identity = 179/197 (90.86%), Postives = 185/197 (93.91%), Query Frame = 0

Query: 1   MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNN 60
           MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSN+FT VNN
Sbjct: 74  MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNDFTAVNN 133

Query: 61  SSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIIDAYEE 120
            S+HR KAAHQKP  AAKGGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIIDAYEE
Sbjct: 134 RSNHRGKAAHQKPPAAAKGGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIIDAYEE 193

Query: 121 KLAESKSGKNNKKERKKKNSGSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEAEKGS 180
           KLAESK+GKNNKKERKK+NSG VSGPGEGK SEPAA+EEE RVTE+E AE GEEE EKGS
Sbjct: 194 KLAESKAGKNNKKERKKRNSGPVSGPGEGKRSEPAAEEEELRVTEREAAEGGEEETEKGS 253

Query: 181 VRRIVSFIGERIWGGWN 198
           VRRIVSFIGERIWG WN
Sbjct: 254 VRRIVSFIGERIWGSWN 270

BLAST of Lsi02G010880 vs. NCBI nr
Match: KAG7019402.1 (hypothetical protein SDJN02_18363, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 319.7 bits (818), Expect = 1.8e-83
Identity = 169/201 (84.08%), Postives = 179/201 (89.05%), Query Frame = 0

Query: 1   MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNN 60
           MKKLYR+RGTVHPSPPIISDHLSFLPTAILTLAAALS EDRE+LAYLISS SN+FTTVNN
Sbjct: 1   MKKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60

Query: 61  SSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIIDAYEE 120
            SSHR KAAHQKP  AAK GSDHPP FSCDCFRCYTSYWVRWDSSPNRQ+IHEIIDAYEE
Sbjct: 61  FSSHRGKAAHQKP-AAAKSGSDHPPVFSCDCFRCYTSYWVRWDSSPNRQMIHEIIDAYEE 120

Query: 121 KLAESKSGKNNKKERKKKN----SGSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEA 180
            LAESK+GKNNKKERKK+N    SGSVS PG+GKGSE A K EESRVTE E A+ GE EA
Sbjct: 121 TLAESKAGKNNKKERKKRNTGSGSGSVSSPGDGKGSELAPKVEESRVTEMEAADGGENEA 180

Query: 181 EKGSVRRIVSFIGERIWGGWN 198
           EKGSVR IVS+IGE+IWGGWN
Sbjct: 181 EKGSVRWIVSYIGEKIWGGWN 200

BLAST of Lsi02G010880 vs. NCBI nr
Match: XP_022927395.1 (uncharacterized protein LOC111434229 [Cucurbita moschata] >KAG6583763.1 hypothetical protein SDJN03_19695, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 318.2 bits (814), Expect = 5.1e-83
Identity = 168/201 (83.58%), Postives = 178/201 (88.56%), Query Frame = 0

Query: 1   MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNN 60
           MKKLYR+RGTVHPSPPIISDHLSFLPTAILTLAAALS EDRE+LAYLISS SN+FTTVNN
Sbjct: 1   MKKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60

Query: 61  SSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIIDAYEE 120
            S HR KAAHQKP  AAK GSDHPP FSCDCFRCYTSYWVRWDSSPNRQ+IHEIIDAYEE
Sbjct: 61  FSGHRGKAAHQKP-AAAKSGSDHPPVFSCDCFRCYTSYWVRWDSSPNRQMIHEIIDAYEE 120

Query: 121 KLAESKSGKNNKKERKKKN----SGSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEA 180
            LAESK+GKNNKKERKK+N    SGSVS PG+GKGSE A K EESRVTE E A+ GE EA
Sbjct: 121 TLAESKAGKNNKKERKKRNTGSGSGSVSSPGDGKGSELAPKVEESRVTEMEAADGGENEA 180

Query: 181 EKGSVRRIVSFIGERIWGGWN 198
           EKGSVR IVS+IGE+IWGGWN
Sbjct: 181 EKGSVRWIVSYIGEKIWGGWN 200

BLAST of Lsi02G010880 vs. NCBI nr
Match: XP_004150423.1 (uncharacterized protein LOC101221021 [Cucumis sativus])

HSP 1 Score: 310.1 bits (793), Expect = 1.4e-80
Identity = 166/198 (83.84%), Postives = 173/198 (87.37%), Query Frame = 0

Query: 1   MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNN 60
           MKKLYRKRGTVHPSP IISDHLSFLPT ILTLAAALSL DREVLAYLISSCSN+FT V N
Sbjct: 1   MKKLYRKRGTVHPSPLIISDHLSFLPTVILTLAAALSLHDREVLAYLISSCSNDFTAVIN 60

Query: 61  SSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIIDAYEE 120
           SSSHR KA HQK   AA GG DHPPAFSC CF+CYTSYWVRWDSSPNRQLIHEIIDAYEE
Sbjct: 61  SSSHRGKATHQK-HAAAMGGLDHPPAFSCYCFQCYTSYWVRWDSSPNRQLIHEIIDAYEE 120

Query: 121 KLAESKSGKNNKKERKKKNS-GSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEAEKG 180
           KLAESK GKNNKKERKK+N+ G VSGPGEGKGSE A KEEE RVTE+E AE GEE AEKG
Sbjct: 121 KLAESKVGKNNKKERKKRNNRGPVSGPGEGKGSEAATKEEEWRVTEREVAEGGEEGAEKG 180

Query: 181 SVRRIVSFIGERIWGGWN 198
            VRRIVS +GE+IWG WN
Sbjct: 181 PVRRIVSLLGEKIWGSWN 197

BLAST of Lsi02G010880 vs. NCBI nr
Match: KAE8652887.1 (hypothetical protein Csa_017671 [Cucumis sativus])

HSP 1 Score: 310.1 bits (793), Expect = 1.4e-80
Identity = 166/198 (83.84%), Postives = 173/198 (87.37%), Query Frame = 0

Query: 1   MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNN 60
           MKKLYRKRGTVHPSP IISDHLSFLPT ILTLAAALSL DREVLAYLISSCSN+FT V N
Sbjct: 157 MKKLYRKRGTVHPSPLIISDHLSFLPTVILTLAAALSLHDREVLAYLISSCSNDFTAVIN 216

Query: 61  SSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIIDAYEE 120
           SSSHR KA HQK   AA GG DHPPAFSC CF+CYTSYWVRWDSSPNRQLIHEIIDAYEE
Sbjct: 217 SSSHRGKATHQK-HAAAMGGLDHPPAFSCYCFQCYTSYWVRWDSSPNRQLIHEIIDAYEE 276

Query: 121 KLAESKSGKNNKKERKKKNS-GSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEAEKG 180
           KLAESK GKNNKKERKK+N+ G VSGPGEGKGSE A KEEE RVTE+E AE GEE AEKG
Sbjct: 277 KLAESKVGKNNKKERKKRNNRGPVSGPGEGKGSEAATKEEEWRVTEREVAEGGEEGAEKG 336

Query: 181 SVRRIVSFIGERIWGGWN 198
            VRRIVS +GE+IWG WN
Sbjct: 337 PVRRIVSLLGEKIWGSWN 353

BLAST of Lsi02G010880 vs. TAIR 10
Match: AT1G62422.1 (unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12020.1); Has 87 Blast hits to 86 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 147.5 bits (371), Expect = 1.1e-35
Identity = 105/203 (51.72%), Postives = 127/203 (62.56%), Query Frame = 0

Query: 1   MKKLYRKRGTVHPSPP--IISDH--LSFLPTAILTLAAALSLEDREVLAYLISSCSNEFT 60
           MKKL RK GTVHPSPP  I +D   LS LP AIL+L AALS+EDREVLAYLIS       
Sbjct: 1   MKKLCRK-GTVHPSPPPAIKTDEQFLSLLPVAILSLVAALSVEDREVLAYLIS------- 60

Query: 61  TVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIID 120
             N+  S+R     +      K  + H P F CDCF CYTSYWVRWD+SP RQLIHEIID
Sbjct: 61  --NSGDSNRISRLKKN-----KEDNHHSPLFLCDCFSCYTSYWVRWDTSPRRQLIHEIID 120

Query: 121 AYEEKLAESKSGKNNKKERKKKNSGSVSGPGEGKGSEPAAKEEE--SRVTEKETAESGEE 180
           AYE+ L E K  K ++++R  K SG V+  G  + SE  +   E     +EK+    GEE
Sbjct: 121 AYEDSL-EMKKKKKDRRKRSGKASGRVNSIGTSRLSELGSSSAEFAGGDSEKDGNCGGEE 180

Query: 181 -EAEKGSVRRIVSFIGERIWGGW 197
            E EKGSV +++SFIG+R  G W
Sbjct: 181 AEKEKGSVGKVMSFIGQRFLGVW 187

BLAST of Lsi02G010880 vs. TAIR 10
Match: AT1G12020.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62422.1); Has 89 Blast hits to 88 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 146.0 bits (367), Expect = 3.3e-35
Identity = 109/233 (46.78%), Postives = 135/233 (57.94%), Query Frame = 0

Query: 1   MKKLYRKRGTVHPSPPII--SDH-LSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTT 60
           MKKLYRK GTVHPSPP I  +DH L+ LP AI +LAA LS EDREVLAYLIS+ S  ++ 
Sbjct: 1   MKKLYRK-GTVHPSPPQIKSNDHLLTLLPVAIFSLAAVLSPEDREVLAYLISTAS--YSG 60

Query: 61  VNNSSSHRSKA-AHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIID 120
             N +S  +K  AH+K         +H P F CDCF CYTSYWVRWDSSP+RQLIHEIID
Sbjct: 61  ERNPTSRLNKTKAHKKALF-----DNHSPLFHCDCFSCYTSYWVRWDSSPSRQLIHEIID 120

Query: 121 AYEEKLAESKSGKNN---KKERKKKNSGS----VSGPGEGKGSEPAAKEEESRVTEKETA 180
           A+E+ L ++K+ K N   KK+R+K++  S     S       SE  ++  ES V      
Sbjct: 121 AFEDSLEKNKNKKKNVTGKKDRRKRSGKSSSLLASSSFSTDDSEIPSRLGESVVNSCPCT 180

Query: 181 ESGE--------------------------EEAEKGSVRRIVSFIGERIWGGW 197
            S E                           E EKG+VRR VSFIGE+++G W
Sbjct: 181 SSSELTQDGGGCSGGLEPMEFFCAGDACEKVEEEKGTVRRFVSFIGEKVFGVW 225

BLAST of Lsi02G010880 vs. TAIR 10
Match: AT5G13090.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 107.1 bits (266), Expect = 1.7e-23
Identity = 65/153 (42.48%), Postives = 86/153 (56.21%), Query Frame = 0

Query: 6   RKRGTVHPSPP---------IISDHLS-----------FLPTAILTLAAALSLEDREVLA 65
           +K+G V+PSPP           S+HL+            LP  IL L + LS E+REVLA
Sbjct: 4   KKKGKVYPSPPPPPQSSSSSSSSNHLNEEDDDSLSVLKLLPATILVLVSVLSSEEREVLA 63

Query: 66  YLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWVRWDSS 125
           YLI+  +      N+SS +++K    K +   K     PP F C+CF CYT+YW RWDSS
Sbjct: 64  YLITRGTTISDRGNSSSKNKTKKKSNKSSKNHK-----PPVFDCECFDCYTNYWFRWDSS 123

Query: 126 PNRQLIHEIIDAYEEKLAESKSGKNNKKERKKK 139
           PNR+LIHEII+A+E    E  S   +K +R KK
Sbjct: 124 PNRELIHEIIEAFENHHGEENSASRSKSKRGKK 151

BLAST of Lsi02G010880 vs. TAIR 10
Match: AT1G24270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13090.1); Has 84 Blast hits to 83 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 92.4 bits (228), Expect = 4.3e-19
Identity = 62/146 (42.47%), Postives = 81/146 (55.48%), Query Frame = 0

Query: 7   KRGTVHPSPPIIS-------DHLS---FLPTAILTLAAALSLEDREVLAYLISSCSNEFT 66
           K+G VHPSPP+ S       D LS    L +AIL L + LS ED EVLAYLI+   N   
Sbjct: 59  KKGKVHPSPPLPSSSSSNGDDSLSVFKLLQSAILVLVSVLSAEDLEVLAYLITRSLN--- 118

Query: 67  TVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIID 126
              N  S + K +H+             P   C CF CYTSYW +WDSS NR+LI++II+
Sbjct: 119 -TTNVVSCKKKRSHK------------APLLDCQCFDCYTSYWSKWDSSSNRELINQIIE 178

Query: 127 AYE-----EKLAESKSGKNNKKERKK 138
           A+E     ++++ S + K NKK  KK
Sbjct: 179 AFEDHLTRDEISASHTSKKNKKRAKK 188

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1ENT02.5e-8383.58uncharacterized protein LOC111434229 OS=Cucurbita moschata OX=3662 GN=LOC1114342... [more]
A0A0A0LVV36.8e-8183.84Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G196260 PE=4 SV=1[more]
A0A6J1KLN68.3e-7980.39uncharacterized protein LOC111495687 OS=Cucurbita maxima OX=3661 GN=LOC111495687... [more]
A0A5D3CKA37.7e-7779.29Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3C9P07.7e-7779.29uncharacterized protein LOC103498228 OS=Cucumis melo OX=3656 GN=LOC103498228 PE=... [more]
Match NameE-valueIdentityDescription
XP_038894832.15.5e-9390.86uncharacterized protein LOC120083238 [Benincasa hispida][more]
KAG7019402.11.8e-8384.08hypothetical protein SDJN02_18363, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022927395.15.1e-8383.58uncharacterized protein LOC111434229 [Cucurbita moschata] >KAG6583763.1 hypothet... [more]
XP_004150423.11.4e-8083.84uncharacterized protein LOC101221021 [Cucumis sativus][more]
KAE8652887.11.4e-8083.84hypothetical protein Csa_017671 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
AT1G62422.11.1e-3551.72unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth ... [more]
AT1G12020.13.3e-3546.78unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G13090.11.7e-2342.48unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G24270.14.3e-1942.47unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 115..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..180
NoneNo IPR availablePANTHERPTHR31903F12F1.11-RELATEDcoord: 1..197
NoneNo IPR availablePANTHERPTHR31903:SF6F12F1.11-RELATEDcoord: 1..197

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G010880.1Lsi02G010880.1mRNA