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Lsi02G010870 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTCTTCTAAAAAAAATAAATCCAACCCTTCCCGGTAAAAATAATAAAATAAAATAAAAAATAAAACCATTGACCAGAAAACCTCGGGCCGAGTTTTGTTGAACGGAGAGAGAATGGATAATAGGAAGATGGGGAAAAGGTTTGAGGGGAAGGTCGCCATTGTTACTGCTTCAACTCAAGGTATTGGCTTCCAAATTGCTCGGCGTCTCGCCTTGGAAGGTGCCTCCGTCGTTATTTCTTCCCGCAGACAGGTTAATTGATACTCTCCGATCTTCTTTCTTTTTTTAAGCTCCAATTTGAACATCATCGCTTGATTCTGCTGTTTTCCTTTGTGATTCTTGAGGTTTTAGAAATTAATGACTTCTAATCGTCGTTTACGTAAGAAAAACAAAATTATTTGCAGGATGACTTTGTTCGTTGTAGTCTTAATCTTTGGTTCGGTTCTTCTTTTAGTTATTTAAATTTCGCCTTATTCGATTTCAGTCTTTATATTATCAATTTTTTTTCTGTTTTTCTTTTGAATTTTGTATAAAATTTAATTCGGACTCTTGCCGTTTGATTTCTATAATGAAAGCACAACATTGGATTTGTGCTTTGAAATACGTATACAGTGTTTGAAGATAGATCATATTAGATGTCTGTTTGGTTTAGTACAAAAAAATTTACCAACAAGGACAGAAAACAGATTTTATGAAATTTCAAAAGTTAAGACAGGGCAATTCAGATTATGCAGATGAGAATGGAATGAATTAAAAAATTGATGAATCTTCGCTGCCAAATTTGAGATAACTCAGTATTATTTGTATATACCTTCTACACCACACTTAAAAGGTCACCTTATAAGCTCTTGTCATATAGAAAAGAAATATTGTTAATGAAGAGTAACGATGATAAAGTTAACAAAAGCATCGACTCCAACAAGAATCTTACATACCTACCACTTCCATCAACTTGGTTAATACATATTTATGGTAAAGTTTTATTTTCTTTTAATAACTGGTCTTAATTTATGAAATTTTTGAATGTTTAAATGGACAATAGGAGATAAGACTTTTCTACTCATTATTTATGTGAAGCATAAATCATGAATGTTATAAAAACTATAACATAAAACTGGTGGATGCTTTCTTTCTTAGTCATATTCCAGTTGGCCTTTAGTGCATCCTTCCTGACTGAATAATGATAATAATGAACAAATTGAGAAAAGGAAACGAAGGAACTAAAACTAGATATATTTTGGTTATTTCAAAGTTTTTTTCAGCAATCAGCAACAACTTTTTGCTTTTAAGAACTTTGGTCTCCCTATACTTTGTTCTTGTAAATGGTTTTTTTGTGAAGTATTTTTTAAATATTTCTTTTTGGCTTATGAATTTGTAGTAATTTTTTTTAACAAGAAGTGAAAGAATGGGTAGTAATTTTAAATGCACAAGAACTTCCCTTTGTGATCCAATTGATCACAATTCTGAAATGCAGTTTCATTTTTTTTAAAAAAAAGAGTCCCAAACACACCCTTGAGTTTTCTTCTCTCTGAGATTTGAATTACCTCCTTTACTGAAGAACTGACATAAAAAGTTTGTGAATTTTGTTGTCTTAACTTTTAGGTTCAAACAGTAAACCATTTATAAGTGAAATGTATTACCTGTGTGAACTCTACTTGTGACTCCATTACCTCTACTAACTACAATGAATTTACTTTCTGTGTTTTACTTTTATGTTTTATGAACTCTTCTTAAATCAAATGTTCTTCTAGAAAAATGTCGATGAGGCAATTGAAAAACTCAAAGCTCAAGGACTTGAAGTGTTAGGGATTATTTGTCATGTATCAAATGCACAGCAAAGAAAGAACCTGGTGGAAAAGACTATCCAGGTGAGAGTAGTTTTATGCTTGCTTTCTAAGTTCTCCTGAACCTAGTGAAAACTGAAAGTGGTTATAATAGATGATCCTTTAACATTATGTTAAAAATCATTATGCGGTTGGTAGATTCAAGCTCATAAGGTTTTTGTTTCCAAAGACAAATAAATTTCTTATTTGATAAACTGAAAAACTTGGCCAGATTTTCGTAATTTTCTCTTGTATTTTTGTTGATAATTTAAAGTCATTTCAAGCTCAGAGTCAATGATATACTCCTGCTACAGTATCTGTAACTTGCTGCTCATATATATGGTGTTATCAATAACACCAATAATGTTACAGTTTTCTTTTGGGTAAGAAACATATGGCCACAAGTTGTATCTGTTCTCTTTCCCATTGCATATTTCAGTTATTAGTTTGAGGTTAATTGACATTAATTGGTTTGCTTACAGAAATATGGAAAAATAGACGTGGTTGTATCGAATGCAGCTGTCAATCCATCAGTCGAATCCATCTTGCGAACTCAAGAATCTGTCCTTGACAAGCTGTGGGACATAAATGTTAAAGCTTCGGTCCTCCTTTTGCAGGTACTATACCGAAGCACAATTTTTAAGAATATTGTCATGATTCAGGGCTTTTTGAAATTAAAGAATATTTCAATGTGAGATTTGGACTTTTTTGAACTAACTAACTACTCCCTTAACTTCTCCCTTCAATATGAACACTACTTGTGTATATATTTAACTTTCATAAATTTCTGCCACAGGAAGTAGCTCCTCACTTGCAGAAAGGCTCTTCAGTTGTTCTCATTTCCTCCATTGAAGGATTCCAGCCTTCTGCCTTATTGGCCATGTATGGGGTGACAAAAACAGCCCTTCTTGGACTGACAAAGGTTAAACAATGGCTTTTCATGCTTTTTGCTCCAACTCTTGTAACTTTTGAATGATAAATATCTGTATATTTTTCTGCTTATTATTCTTCTTGATTGATTTCCTTCAGGCTCTTGCTGCAGAGATGGCCCCTGACACTCGTGTAAACTGTGTCGCCCCCGGTTTCGTGCCAACACACTTTGCTGATTTCCTTGTGTCTAATGAAGCCGTTGTAAGTAACTGTTTTAATACCTTAGTCTTTTTATTGTTCTGGTAAATATGTTTTACAGTTCTAAAGATAGTTCATTGGATTTGAACCAAATTCAGAAAAAGGGGGTTGAGTCAAAGACTTTACTCAACCGGCTCGGCACGACTGAAGACATGGCTGCTGCCACCGCCTTCTTGGCATCGGACGACGCTTCGTATATTACAGGCGAAACTCTGGTTGTAGCTGGGGGGATGCCTTCCAGACTCTAGCTCATTTCCACTATATCCTCAAAGATAATTAAATTAGAACTGGTGAGGGTGTTGGTTGGTTTTCTTTCTCAATTAGGAATTCAGAAATAAATATTTATAAGCTCTCTTATGCCTTTTTCCCTTTTTACTTATTATGGGTTAGCTTTTGTAACCGAAAGAAAGAAATCTTATTTATCATAATAAATTTTCTACTTATATTTAGTGTGTGTAAATATGTCAACTTCTGGTAATCTCCAAGAAAGAAGGTAGTGCAGTTTTTGGGTGTGTTGTTTATTTAAGTGAAGTGCTTTATATCCATCCTGAATATTTGATGGGTTGATTTATTTTTCATTTTCTTGAATCGATATTATAAGTATACACTTAATTCTAAA AATTCTTCTAAAAAAAATAAATCCAACCCTTCCCGGTAAAAATAATAAAATAAAATAAAAAATAAAACCATTGACCAGAAAACCTCGGGCCGAGTTTTGTTGAACGGAGAGAGAATGGATAATAGGAAGATGGGGAAAAGGTTTGAGGGGAAGGTCGCCATTGTTACTGCTTCAACTCAAGGTATTGGCTTCCAAATTGCTCGGCGTCTCGCCTTGGAAGGTGCCTCCGTCGTTATTTCTTCCCGCAGACAGAAAAATGTCGATGAGGCAATTGAAAAACTCAAAGCTCAAGGACTTGAAGTGTTAGGGATTATTTGTCATGTATCAAATGCACAGCAAAGAAAGAACCTGGTGGAAAAGACTATCCAGAAATATGGAAAAATAGACGTGGTTGTATCGAATGCAGCTGTCAATCCATCAGTCGAATCCATCTTGCGAACTCAAGAATCTGTCCTTGACAAGCTGTGGGACATAAATGTTAAAGCTTCGGTCCTCCTTTTGCAGGAAGTAGCTCCTCACTTGCAGAAAGGCTCTTCAGTTGTTCTCATTTCCTCCATTGAAGGATTCCAGCCTTCTGCCTTATTGGCCATGTATGGGGTGACAAAAACAGCCCTTCTTGGACTGACAAAGGCTCTTGCTGCAGAGATGGCCCCTGACACTCGTGTAAACTGTGTCGCCCCCGGTTTCGTGCCAACACACTTTGCTGATTTCCTTGTGTCTAATGAAGCCGTTAAAAAGGGGGTTGAGTCAAAGACTTTACTCAACCGGCTCGGCACGACTGAAGACATGGCTGCTGCCACCGCCTTCTTGGCATCGGACGACGCTTCGTATATTACAGGCGAAACTCTGGTTGTAGCTGGGGGGATGCCTTCCAGACTCTAGCTCATTTCCACTATATCCTCAAAGATAATTAAATTAGAACTGGTGAGGGTGTTGGTTGGTTTTCTTTCTCAATTAGGAATTCAGAAATAAATATTTATAAGCTCTCTTATGCCTTTTTCCCTTTTTACTTATTATGGGTTAGCTTTTGTAACCGAAAGAAAGAAATCTTATTTATCATAATAAATTTTCTACTTATATTTAGTGTGTGTAAATATGTCAACTTCTGGTAATCTCCAAGAAAGAAGGTAGTGCAGTTTTTGGGTGTGTTGTTTATTTAAGTGAAGTGCTTTATATCCATCCTGAATATTTGATGGGTTGATTTATTTTTCATTTTCTTGAATCGATATTATAAGTATACACTTAATTCTAAA ATGGATAATAGGAAGATGGGGAAAAGGTTTGAGGGGAAGGTCGCCATTGTTACTGCTTCAACTCAAGGTATTGGCTTCCAAATTGCTCGGCGTCTCGCCTTGGAAGGTGCCTCCGTCGTTATTTCTTCCCGCAGACAGAAAAATGTCGATGAGGCAATTGAAAAACTCAAAGCTCAAGGACTTGAAGTGTTAGGGATTATTTGTCATGTATCAAATGCACAGCAAAGAAAGAACCTGGTGGAAAAGACTATCCAGAAATATGGAAAAATAGACGTGGTTGTATCGAATGCAGCTGTCAATCCATCAGTCGAATCCATCTTGCGAACTCAAGAATCTGTCCTTGACAAGCTGTGGGACATAAATGTTAAAGCTTCGGTCCTCCTTTTGCAGGAAGTAGCTCCTCACTTGCAGAAAGGCTCTTCAGTTGTTCTCATTTCCTCCATTGAAGGATTCCAGCCTTCTGCCTTATTGGCCATGTATGGGGTGACAAAAACAGCCCTTCTTGGACTGACAAAGGCTCTTGCTGCAGAGATGGCCCCTGACACTCGTGTAAACTGTGTCGCCCCCGGTTTCGTGCCAACACACTTTGCTGATTTCCTTGTGTCTAATGAAGCCGTTAAAAAGGGGGTTGAGTCAAAGACTTTACTCAACCGGCTCGGCACGACTGAAGACATGGCTGCTGCCACCGCCTTCTTGGCATCGGACGACGCTTCGTATATTACAGGCGAAACTCTGGTTGTAGCTGGGGGGATGCCTTCCAGACTCTAG MDNRKMGKRFEGKVAIVTASTQGIGFQIARRLALEGASVVISSRRQKNVDEAIEKLKAQGLEVLGIICHVSNAQQRKNLVEKTIQKYGKIDVVVSNAAVNPSVESILRTQESVLDKLWDINVKASVLLLQEVAPHLQKGSSVVLISSIEGFQPSALLAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFADFLVSNEAVKKGVESKTLLNRLGTTEDMAAATAFLASDDASYITGETLVVAGGMPSRL Homology
BLAST of Lsi02G010870 vs. ExPASy Swiss-Prot
Match: H9BFQ2 (Tropinone reductase-like 3 OS=Erythroxylum coca OX=289672 PE=2 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 8.1e-108 Identity = 197/252 (78.17%), Postives = 228/252 (90.48%), Query Frame = 0
BLAST of Lsi02G010870 vs. ExPASy Swiss-Prot
Match: Q9S9W2 (Short-chain dehydrogenase/reductase SDRA OS=Arabidopsis thaliana OX=3702 GN=SDRA PE=1 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 4.6e-103 Identity = 187/252 (74.21%), Postives = 220/252 (87.30%), Query Frame = 0
BLAST of Lsi02G010870 vs. ExPASy Swiss-Prot
Match: Q9BTZ2 (Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens OX=9606 GN=DHRS4 PE=1 SV=3) HSP 1 Score: 241.5 bits (615), Expect = 1.0e-62 Identity = 131/246 (53.25%), Postives = 172/246 (69.92%), Query Frame = 0
BLAST of Lsi02G010870 vs. ExPASy Swiss-Prot
Match: Q5RCF8 (Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii OX=9601 GN=DHRS4 PE=2 SV=3) HSP 1 Score: 240.7 bits (613), Expect = 1.8e-62 Identity = 130/246 (52.85%), Postives = 172/246 (69.92%), Query Frame = 0
BLAST of Lsi02G010870 vs. ExPASy Swiss-Prot
Match: Q9GKX2 (Dehydrogenase/reductase SDR family member 4 (Fragment) OS=Oryctolagus cuniculus OX=9986 GN=DHRS4 PE=1 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 4.4e-61 Identity = 130/246 (52.85%), Postives = 171/246 (69.51%), Query Frame = 0
BLAST of Lsi02G010870 vs. ExPASy TrEMBL
Match: A0A1S3CAC1 (tropinone reductase-like 3 OS=Cucumis melo OX=3656 GN=LOC103498229 PE=4 SV=1) HSP 1 Score: 460.3 bits (1183), Expect = 5.2e-126 Identity = 240/255 (94.12%), Postives = 252/255 (98.82%), Query Frame = 0
BLAST of Lsi02G010870 vs. ExPASy TrEMBL
Match: A0A6J1EBY0 (tropinone reductase-like 3 OS=Cucurbita moschata OX=3662 GN=LOC111432646 PE=4 SV=1) HSP 1 Score: 459.5 bits (1181), Expect = 8.9e-126 Identity = 240/255 (94.12%), Postives = 251/255 (98.43%), Query Frame = 0
BLAST of Lsi02G010870 vs. ExPASy TrEMBL
Match: A0A6J1K1F0 (tropinone reductase-like 3 OS=Cucurbita maxima OX=3661 GN=LOC111490216 PE=4 SV=1) HSP 1 Score: 456.4 bits (1173), Expect = 7.6e-125 Identity = 240/255 (94.12%), Postives = 251/255 (98.43%), Query Frame = 0
BLAST of Lsi02G010870 vs. ExPASy TrEMBL
Match: A0A0A0LYF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G698530 PE=4 SV=1) HSP 1 Score: 453.4 bits (1165), Expect = 6.4e-124 Identity = 236/255 (92.55%), Postives = 250/255 (98.04%), Query Frame = 0
BLAST of Lsi02G010870 vs. ExPASy TrEMBL
Match: A0A6J1CNC4 (tropinone reductase-like 3 OS=Momordica charantia OX=3673 GN=LOC111012595 PE=4 SV=1) HSP 1 Score: 452.2 bits (1162), Expect = 1.4e-123 Identity = 236/255 (92.55%), Postives = 249/255 (97.65%), Query Frame = 0
BLAST of Lsi02G010870 vs. NCBI nr
Match: XP_038893919.1 (tropinone reductase-like 3 [Benincasa hispida]) HSP 1 Score: 464.2 bits (1193), Expect = 7.5e-127 Identity = 245/255 (96.08%), Postives = 252/255 (98.82%), Query Frame = 0
BLAST of Lsi02G010870 vs. NCBI nr
Match: XP_008458979.1 (PREDICTED: tropinone reductase-like 3 [Cucumis melo]) HSP 1 Score: 460.3 bits (1183), Expect = 1.1e-125 Identity = 240/255 (94.12%), Postives = 252/255 (98.82%), Query Frame = 0
BLAST of Lsi02G010870 vs. NCBI nr
Match: KAG6573495.1 (hypothetical protein SDJN03_27382, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 459.9 bits (1182), Expect = 1.4e-125 Identity = 241/255 (94.51%), Postives = 251/255 (98.43%), Query Frame = 0
BLAST of Lsi02G010870 vs. NCBI nr
Match: XP_022925358.1 (tropinone reductase-like 3 [Cucurbita moschata] >XP_022925359.1 tropinone reductase-like 3 [Cucurbita moschata]) HSP 1 Score: 459.5 bits (1181), Expect = 1.8e-125 Identity = 240/255 (94.12%), Postives = 251/255 (98.43%), Query Frame = 0
BLAST of Lsi02G010870 vs. NCBI nr
Match: XP_023525934.1 (tropinone reductase-like 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 458.4 bits (1178), Expect = 4.1e-125 Identity = 240/255 (94.12%), Postives = 251/255 (98.43%), Query Frame = 0
BLAST of Lsi02G010870 vs. TAIR 10
Match: AT4G05530.1 (indole-3-butyric acid response 1 ) HSP 1 Score: 375.6 bits (963), Expect = 3.3e-104 Identity = 187/252 (74.21%), Postives = 220/252 (87.30%), Query Frame = 0
BLAST of Lsi02G010870 vs. TAIR 10
Match: AT5G06060.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 129.0 bits (323), Expect = 5.3e-30 Identity = 84/243 (34.57%), Postives = 133/243 (54.73%), Query Frame = 0
BLAST of Lsi02G010870 vs. TAIR 10
Match: AT2G29150.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 122.9 bits (307), Expect = 3.8e-28 Identity = 83/244 (34.02%), Postives = 135/244 (55.33%), Query Frame = 0
BLAST of Lsi02G010870 vs. TAIR 10
Match: AT2G29260.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 117.9 bits (294), Expect = 1.2e-26 Identity = 84/244 (34.43%), Postives = 127/244 (52.05%), Query Frame = 0
BLAST of Lsi02G010870 vs. TAIR 10
Match: AT2G29340.2 (NAD-dependent epimerase/dehydratase family protein ) HSP 1 Score: 116.3 bits (290), Expect = 3.6e-26 Identity = 81/252 (32.14%), Postives = 138/252 (54.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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