Lsi02G010830 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGAAATGGCCTCGGGAAAGAGCCAGCTGCCGATTGACAATTCCTCCGCGGTTCATCCTTCTCATACTTCCCCCCACATTCTCTTCTTCTTCCTCCATTCTAACCTTCATTTCCCAAGCTATGGCTACTGCTTCCTCTTCTTCCTCTTCCGCAGTTTTCGCTATCTCTTCCCTCCAATTGAAGCCAAACAACGTAGCCTCTTACAGAATCCCCAATTCCTTCTCTCGCCCTTCCTTCTTTGCACGCCCTTTAATTTCCAGGTAACACTTCCTCTAAATGCTTCTTTAATACCTACACCTTTTGGATTTTATCTGCTTCCTTCATTGCCATTTCTTGAATGGTTTTTGATTTCATATTATTCGCAATTTCATTTTCTTGATGTAGAAAATCATGTCGGGTGCTGGCAACAGTTGTTAAGGAAAATGAGGAAAAAGTGGTTGTGGAGGATTCATTCCCTCCTAAGGCTTCTCCTGTCCACGACGGGGAAGGAGGCAGTAACCAAGGACCAGAAAATTCATCCTCCAATGGCTTGGATAAATGGATCATTAAGCTTGAACAATCTGTTAATGTTCTTCTCACGGTAATCTCAGTTCAAACTGATCATTGCTCTTCATTTGTGCAAAATTGGTTCTCTAATACTTGATATGTTGAATCGTGAACTCTGCTTTACTAATCTTTTCAGGATTCAGTAATAAGGATTCTTGATGCATTTTACCACGATAGACACTACGCAAGGTTCTTTGTCTTGGAAACTATTGCAAGGGTTCCCTATTTTGGTGAGATTTTTTTTTTTCTTCCTTGAAACAGAGCTAACCTGTAATAATCTTAATATGAGTGGGACTTTTATTTTGGTGAAGTTTGGAAGGCTGTAGAAACGATTTTATGACGCCTAATGCTTATGAAAAGCATTTTCATTCAGTGAAATTGAGTTATCTAATAAATATGCAGATAGTTGTTTATTTCAAAGAATTGATTCTGCAACTAACTAATTCTGGAGCCAGATTGTACATCTTCTGTGGATGTTATTGAGGATTAGAACAGTAGTATCTAGTTTGAAATTGTTTCTAATTTCTCCCTTTTAAATTGCAGCGTTTCTGTCAGTTCTGCATTTGTATGAAAGTTTTGGCTGGTGGAGAAGAGCTGATTATCTTAAAGTTCACTTTGCTGAGAGCTGGAATGAGATGCATCACTTGCTGATCATGGAGGTACTTATTATCTTGGGCTTCCTTTAGATGGCACATAATATCCTTTCCTTAAGTTGCCCCATTGGAAACTCCATGATTTCATCCTGGTTTTAGTTGGAAGTATTTCCTTTTTTCATTTGTCCTAGTATGTTGTAGGACTATGATAGGAATATTATTAGGAAATAATTAGAGTATTAAGAGCATATTAGCAATTAGTTAAGGAGTATCAAGTATGTTAGGGAAGTTTGGTTATAAATAGAGTGAGTAGGGAAGGAGATCTTGAGATTGAGAGGGTCCAGGTACTTCGAATTACTTGGTATATCTTGTAGTTTAGTTACCATTTATATTCCAATATATTTGAGTTCTACTAGACTATATTGATCATAATGGTGGCTGCATAAGACTTTCCTATTTCCTACAATATATTTTCCTTTTGAATCATCCATGTTTAACCCTGTGCACCCATCTAGACATTGAATTACTGAATAAATTATCTCTGTTTCTGACTTGAGTGCAGGAATTGGGGGGTAATGATGGGTGGTTTGATCGATTTCTTGCTCAACATATCGCTGTTGCTTATTATTTTATGACAGTACTGATGTACATGATTAGCCCAAGAATGGCATGTAAGTATTGTTGGAGCTGATAAATTCAACCTGCTTATACTCTCTTTCTTGCATCCTTTTATGGGCTTGTTCAGTTTTTACAACTGTACTAAGTTACCAAGAAAACAGAAAATTAGCATGACTTTCCTTCTCAATAAAACTTACAAAGGAACTAAAATGTAAATTGCAGTTTGGTGTAAAACAATAAGAAGTGGCGAGTTGCTTTGGGACACCTTTCTACTTTGCTGCGCTTTAACATCTTAAGTTCTTTGCATTCAACTTTTAGTGACATTGTTCTCTATTGATATTTGATTAGTGCAGATCATCTTTCTGAATGTGTTGAAAGCCATGCATTTTCAACTTATGATAAGTTTATAAAGGCCCAAGGAGGTACGTTGGTTGCATTATTTGATGATGATCTTAAATTTCATCTAGTTAACATTAATTCTCGAAGGGGAATATCGTTCTGACGTGTTCCATTCCTTGTGCTATAGAGGAGTTGAAAAAATTGCCTGCTCCCGAGGTTGCTGTGAAGTATTACACTGAGGGAGACTTGTACTTATTTGGTAAGTTCTAGCTTTCTTACCACGTGCACAGTTATTTCGTTCAAACTGACACTAACAGATTGATTTCATTCAGATGAATTTCAAACTTCCAGAGCTCCAAAATCACGAAGACCAAAAATAGGTAAATTTTATAATATGGAATAGTTACCGTACTTCATCGCCCAATATATAATACTACCATCATGAAGGCATGTCTTAAAAATAGAAGGATAAGAGTAGAAGCCCCAAGCACGCGTATGTGACTCTTTTTCTCTTCTTTTTCTTTGAAGTTTTAAGATCCCTCAAACTAGATAGACCTTTAAACATTACTGGCTGATAAATCATAATATTATACGTAATAGTTGATATTTGTGGTAATTGGTTCGTTGTATCTGCGTTCTTTGTGTTGGAAAGTTCATTTTACTAGATATAAATTTATATGCACCTGAGAAATTGATTAATGAAGGAAATAGTTGGAGTATTAAAAGTTTGATACCTTCATGGCTTCATTTCCAGAATTGACCTTAAAATTAGACTTGATTGTGAAACATCAAAAGTTTTACAACTCTTCAATTGTAAAAAAAAGGTTTTGATTCCCTTTTTTCTGCACCAACTTGATCTCCCACTTCTTCCTTTGCTTTTCTTCAATATACACAGTTTTCGTTAGGCAAAGTTGCAAGATTGCTAGGAGTGCAAACAAAATCCCACATTGGTTAAGGAATGGAATGATTATGGGTATATAAGTGAGGTCAATTATCTTTATTGGTATGAGACTTTTTGGGTGGTACCAAAAGCAAAGTCATGAAGCTTAAAAAGAGGGTGTATTGGCTTTGTCTAGCAAGGCAACACATGACCTTACTTGAACAGAATCTGTTGAAATATGCTATAATTGTATCTCAGATCAGTTGCTTGATTGACTTCAAGCATTCAGAAATTTTCTCAAAAGAAACTGTATAATACATGACAGCACTTAAGAACTGTTATATATTTGTTTTCAATTGTCGCCATATTTCTAATTCTTGCAAGTTTGAATATGATACTTTTTTTTCGTAGAGAGCTTGTACGATGTGTTTGTGAACATCAGAGACGACGAAGCCGAGCATTGCAAGACCATGAGAGCTTGTCAATCGCATGGGAACCTCCGGTCACCACATTCTTATTCAGAGAGCTATCCTGAAGATGATGAGCCACTCTGCAACCTTGCTGAAGCAGATTGTGAAGGCATTGTAGACTGTATAAAGAAATCCGTTACTTCTTCCCCTCCGGTAAAGCAAAAACTATGATATGCGTATATACATATAAAGAAAATGTAAGTTCACTAAATTCACACGTAGTAAATATCTGTCACATACATACAGGAGAAAAAATGTAAGGTCCATATATAGGTTATTTGATGATCTTACAAAAGCTGACATTGCACCTATCTTTGTAATGGACTGCTTATACCAATAATATAGAGTTCAAAATTCTGATGTC GGGAAATGGCCTCGGGAAAGAGCCAGCTGCCGATTGACAATTCCTCCGCGGTTCATCCTTCTCATACTTCCCCCCACATTCTCTTCTTCTTCCTCCATTCTAACCTTCATTTCCCAAGCTATGGCTACTGCTTCCTCTTCTTCCTCTTCCGCAGTTTTCGCTATCTCTTCCCTCCAATTGAAGCCAAACAACGTAGCCTCTTACAGAATCCCCAATTCCTTCTCTCGCCCTTCCTTCTTTGCACGCCCTTTAATTTCCAGAAAATCATGTCGGGTGCTGGCAACAGTTGTTAAGGAAAATGAGGAAAAAGTGGTTGTGGAGGATTCATTCCCTCCTAAGGCTTCTCCTGTCCACGACGGGGAAGGAGGCAGTAACCAAGGACCAGAAAATTCATCCTCCAATGGCTTGGATAAATGGATCATTAAGCTTGAACAATCTGTTAATGTTCTTCTCACGGATTCAGTAATAAGGATTCTTGATGCATTTTACCACGATAGACACTACGCAAGGTTCTTTGTCTTGGAAACTATTGCAAGGGTTCCCTATTTTGCGTTTCTGTCAGTTCTGCATTTGTATGAAAGTTTTGGCTGGTGGAGAAGAGCTGATTATCTTAAAGTTCACTTTGCTGAGAGCTGGAATGAGATGCATCACTTGCTGATCATGGAGGAATTGGGGGGTAATGATGGGTGGTTTGATCGATTTCTTGCTCAACATATCGCTGTTGCTTATTATTTTATGACAGTACTGATGTACATGATTAGCCCAAGAATGGCATATCATCTTTCTGAATGTGTTGAAAGCCATGCATTTTCAACTTATGATAAGTTTATAAAGGCCCAAGGAGAGGAGTTGAAAAAATTGCCTGCTCCCGAGGTTGCTGTGAAGTATTACACTGAGGGAGACTTGTACTTATTTGAGAGCTTGTACGATGTGTTTGTGAACATCAGAGACGACGAAGCCGAGCATTGCAAGACCATGAGAGCTTGTCAATCGCATGGGAACCTCCGGTCACCACATTCTTATTCAGAGAGCTATCCTGAAGATGATGAGCCACTCTGCAACCTTGCTGAAGCAGATTGTGAAGGCATTGTAGACTGTATAAAGAAATCCGTTACTTCTTCCCCTCCGGTAAAGCAAAAACTATGATATGCGTATATACATATAAAGAAAATGTAAGTTCACTAAATTCACACGTAGTAAATATCTGTCACATACATACAGGAGAAAAAATGTAAGGTCCATATATAGGTTATTTGATGATCTTACAAAAGCTGACATTGCACCTATCTTTGTAATGGACTGCTTATACCAATAATATAGAGTTCAAAATTCTGATGTC ATGGCTACTGCTTCCTCTTCTTCCTCTTCCGCAGTTTTCGCTATCTCTTCCCTCCAATTGAAGCCAAACAACGTAGCCTCTTACAGAATCCCCAATTCCTTCTCTCGCCCTTCCTTCTTTGCACGCCCTTTAATTTCCAGAAAATCATGTCGGGTGCTGGCAACAGTTGTTAAGGAAAATGAGGAAAAAGTGGTTGTGGAGGATTCATTCCCTCCTAAGGCTTCTCCTGTCCACGACGGGGAAGGAGGCAGTAACCAAGGACCAGAAAATTCATCCTCCAATGGCTTGGATAAATGGATCATTAAGCTTGAACAATCTGTTAATGTTCTTCTCACGGATTCAGTAATAAGGATTCTTGATGCATTTTACCACGATAGACACTACGCAAGGTTCTTTGTCTTGGAAACTATTGCAAGGGTTCCCTATTTTGCGTTTCTGTCAGTTCTGCATTTGTATGAAAGTTTTGGCTGGTGGAGAAGAGCTGATTATCTTAAAGTTCACTTTGCTGAGAGCTGGAATGAGATGCATCACTTGCTGATCATGGAGGAATTGGGGGGTAATGATGGGTGGTTTGATCGATTTCTTGCTCAACATATCGCTGTTGCTTATTATTTTATGACAGTACTGATGTACATGATTAGCCCAAGAATGGCATATCATCTTTCTGAATGTGTTGAAAGCCATGCATTTTCAACTTATGATAAGTTTATAAAGGCCCAAGGAGAGGAGTTGAAAAAATTGCCTGCTCCCGAGGTTGCTGTGAAGTATTACACTGAGGGAGACTTGTACTTATTTGAGAGCTTGTACGATGTGTTTGTGAACATCAGAGACGACGAAGCCGAGCATTGCAAGACCATGAGAGCTTGTCAATCGCATGGGAACCTCCGGTCACCACATTCTTATTCAGAGAGCTATCCTGAAGATGATGAGCCACTCTGCAACCTTGCTGAAGCAGATTGTGAAGGCATTGTAGACTGTATAAAGAAATCCGTTACTTCTTCCCCTCCGGTAAAGCAAAAACTATGA MATASSSSSSAVFAISSLQLKPNNVASYRIPNSFSRPSFFARPLISRKSCRVLATVVKENEEKVVVEDSFPPKASPVHDGEGGSNQGPENSSSNGLDKWIIKLEQSVNVLLTDSVIRILDAFYHDRHYARFFVLETIARVPYFAFLSVLHLYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNDGWFDRFLAQHIAVAYYFMTVLMYMISPRMAYHLSECVESHAFSTYDKFIKAQGEELKKLPAPEVAVKYYTEGDLYLFESLYDVFVNIRDDEAEHCKTMRACQSHGNLRSPHSYSESYPEDDEPLCNLAEADCEGIVDCIKKSVTSSPPVKQKL Homology
BLAST of Lsi02G010830 vs. ExPASy Swiss-Prot
Match: Q56X52 (Ubiquinol oxidase 4, chloroplastic/chromoplastic OS=Arabidopsis thaliana OX=3702 GN=AOX4 PE=1 SV=2) HSP 1 Score: 409.1 bits (1050), Expect = 5.0e-113 Identity = 208/310 (67.10%), Postives = 241/310 (77.74%), Query Frame = 0
BLAST of Lsi02G010830 vs. ExPASy Swiss-Prot
Match: O22049 (Ubiquinol oxidase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=AOX2 PE=1 SV=2) HSP 1 Score: 71.6 bits (174), Expect = 1.9e-11 Identity = 50/164 (30.49%), Postives = 82/164 (50.00%), Query Frame = 0
BLAST of Lsi02G010830 vs. ExPASy Swiss-Prot
Match: Q40578 (Ubiquinol oxidase 2, mitochondrial OS=Nicotiana tabacum OX=4097 GN=AOX2 PE=1 SV=2) HSP 1 Score: 71.6 bits (174), Expect = 1.9e-11 Identity = 49/167 (29.34%), Postives = 86/167 (51.50%), Query Frame = 0
BLAST of Lsi02G010830 vs. ExPASy Swiss-Prot
Match: Q8W855 (Ubiquinol oxidase 1c, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=AOX1C PE=2 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 2.5e-11 Identity = 51/169 (30.18%), Postives = 86/169 (50.89%), Query Frame = 0
BLAST of Lsi02G010830 vs. ExPASy Swiss-Prot
Match: O22048 (Ubiquinol oxidase 1c, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=AOX1C PE=1 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 7.2e-11 Identity = 46/164 (28.05%), Postives = 82/164 (50.00%), Query Frame = 0
BLAST of Lsi02G010830 vs. ExPASy TrEMBL
Match: A0A5A7UI87 (Ubiquinol oxidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00950 PE=3 SV=1) HSP 1 Score: 603.6 bits (1555), Expect = 5.1e-169 Identity = 306/360 (85.00%), Postives = 325/360 (90.28%), Query Frame = 0
BLAST of Lsi02G010830 vs. ExPASy TrEMBL
Match: A0A1S3C992 (Ubiquinol oxidase OS=Cucumis melo OX=3656 GN=LOC103498237 PE=3 SV=1) HSP 1 Score: 603.6 bits (1555), Expect = 5.1e-169 Identity = 306/360 (85.00%), Postives = 325/360 (90.28%), Query Frame = 0
BLAST of Lsi02G010830 vs. ExPASy TrEMBL
Match: A0A0A0M130 (Ubiquinol oxidase OS=Cucumis sativus OX=3659 GN=Csa_1G699610 PE=3 SV=1) HSP 1 Score: 595.5 bits (1534), Expect = 1.4e-166 Identity = 300/360 (83.33%), Postives = 322/360 (89.44%), Query Frame = 0
BLAST of Lsi02G010830 vs. ExPASy TrEMBL
Match: A0A6J1GSZ7 (Ubiquinol oxidase OS=Cucurbita moschata OX=3662 GN=LOC111457254 PE=3 SV=1) HSP 1 Score: 589.0 bits (1517), Expect = 1.3e-164 Identity = 301/361 (83.38%), Postives = 320/361 (88.64%), Query Frame = 0
BLAST of Lsi02G010830 vs. ExPASy TrEMBL
Match: A0A6J1K2B2 (Ubiquinol oxidase OS=Cucurbita maxima OX=3661 GN=LOC111490026 PE=3 SV=1) HSP 1 Score: 586.6 bits (1511), Expect = 6.5e-164 Identity = 299/361 (82.83%), Postives = 320/361 (88.64%), Query Frame = 0
BLAST of Lsi02G010830 vs. NCBI nr
Match: XP_038893742.1 (ubiquinol oxidase 4, chloroplastic/chromoplastic-like [Benincasa hispida]) HSP 1 Score: 613.2 bits (1580), Expect = 1.3e-171 Identity = 313/360 (86.94%), Postives = 323/360 (89.72%), Query Frame = 0
BLAST of Lsi02G010830 vs. NCBI nr
Match: XP_008458986.1 (PREDICTED: ubiquinol oxidase 4, chloroplastic/chromoplastic-like [Cucumis melo] >KAA0054287.1 ubiquinol oxidase 4 [Cucumis melo var. makuwa] >TYK12325.1 ubiquinol oxidase 4 [Cucumis melo var. makuwa]) HSP 1 Score: 603.6 bits (1555), Expect = 1.1e-168 Identity = 306/360 (85.00%), Postives = 325/360 (90.28%), Query Frame = 0
BLAST of Lsi02G010830 vs. NCBI nr
Match: XP_004145426.1 (ubiquinol oxidase 4, chloroplastic/chromoplastic [Cucumis sativus]) HSP 1 Score: 595.5 bits (1534), Expect = 2.9e-166 Identity = 300/360 (83.33%), Postives = 322/360 (89.44%), Query Frame = 0
BLAST of Lsi02G010830 vs. NCBI nr
Match: XP_022955227.1 (ubiquinol oxidase 4, chloroplastic/chromoplastic [Cucurbita moschata]) HSP 1 Score: 589.0 bits (1517), Expect = 2.7e-164 Identity = 301/361 (83.38%), Postives = 320/361 (88.64%), Query Frame = 0
BLAST of Lsi02G010830 vs. NCBI nr
Match: XP_022994224.1 (ubiquinol oxidase 4, chloroplastic/chromoplastic [Cucurbita maxima]) HSP 1 Score: 586.6 bits (1511), Expect = 1.3e-163 Identity = 299/361 (82.83%), Postives = 320/361 (88.64%), Query Frame = 0
BLAST of Lsi02G010830 vs. TAIR 10
Match: AT4G22260.1 (Alternative oxidase family protein ) HSP 1 Score: 409.1 bits (1050), Expect = 3.6e-114 Identity = 208/310 (67.10%), Postives = 241/310 (77.74%), Query Frame = 0
BLAST of Lsi02G010830 vs. TAIR 10
Match: AT5G64210.1 (alternative oxidase 2 ) HSP 1 Score: 71.6 bits (174), Expect = 1.3e-12 Identity = 50/164 (30.49%), Postives = 82/164 (50.00%), Query Frame = 0
BLAST of Lsi02G010830 vs. TAIR 10
Match: AT3G27620.1 (alternative oxidase 1C ) HSP 1 Score: 69.7 bits (169), Expect = 5.1e-12 Identity = 46/164 (28.05%), Postives = 82/164 (50.00%), Query Frame = 0
BLAST of Lsi02G010830 vs. TAIR 10
Match: AT1G32350.1 (alternative oxidase 1D ) HSP 1 Score: 68.9 bits (167), Expect = 8.7e-12 Identity = 47/162 (29.01%), Postives = 80/162 (49.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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