Lsi02G010800 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi02G010800
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionE3 ubiquitin-protein ligase COP1-like
Locationchr02: 12058182 .. 12067943 (-)
RNA-Seq ExpressionLsi02G010800
SyntenyLsi02G010800
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTCACTAACCCCATTCATTCCTTTCCTTTCTTCTTCCGTACGCTAATCGCTAACCCCTTCCTTTCCCTTCTTCTTCCTTCTTTAAACCTCTCTCTTTCTTCCTTCCCCCCTTCAATGGCAGCCACATAATTTCCATATATCTTTTCTCCTTAACAATCTTCACTTATGGGTGGCGGTTCCACTTCCATTGGAGCTTTGGTTCCTACTGTCAAACCTGAGCCCTCTACTGTCGACTCTACCGCTTCCCCTACTCCCCCTCCCTTACCTCCTACTACTCCTCCTCCCCCTCCTCCGCCCCCCTCCGACCTAATGCCTGCTCAATTCGAACCTGGGGATACCAATGCCGCCACTGCGTCTCAACCCAATACCGATGATTTAGATAAGGATATGCTTTGCCCTATTTGCATGCAGATCATTAAAGATGCCTTTCTCACTACTTGTGGACATAGCTTTTGCTATATGTGTATTGTTACTCATCTTCGGAATAAGAGTGATTGTCCTTGCTGCGCTCATTTCCTCAGGAGTAACAGCATTTTCCCCAATATTTTGCTTGATAAGGTTTGCTGCTCTTCATTTCTCTTTTTTCGATTTTCAATTTCACTCATCTGTTGAATTGGATCTTGATTCCTAGCGTTCGGTTTTCAATTTTGCTTGCAGTCTCTGTTTGGTTTACACTATTATTAGTTGATGATCACATGTTACTTTATATTTTTTTAAGTATATGTGGGTGATAAAGTGCCTAGGTTTTGACACTTTGACTGTTGTTGCACTGGAGACCGTTCTATAGTGTGAGTCGATCGTTTAATGGTATATTATATAATAATGAAGTCATTCCATTATGGGTGGAACTATTCTTTCTTTAATTTCTTAGATTGTTGCTGATCTTCCCCTAGATCTGTGAAGTTTCTTAATGCCTGTAGGGTATGCAGCCTAGATTTTATATTTATGTTTTCTAGTTTGTTTGGCATATTTGTTTTTGAAAATTGTTTATGGATCCTATGGTCCAAATTGTGAAATTTCTGAAAACAACGTTTTTGTGTTTTTAATGTATTTCGATATTGAATTTGAATTATTGAACTGTTGAATTACATTAAAGAAAATTAAAAACTTTGATAAACATAGTATTTCATATTGTAAAGTTATTTTTATTTTTGTACAAATAAATAGTATAACATATTATACTATAAATGATATGATATTGTGAAATAATAATCACACAGAATTTATAACGTGAAATGAAACACGTGTTCATTAATTAATATTCATAGTTGAGATTTAATATAACATTGATTTTGTTACTAGAACCATTTTTATGGTCTATAAAATATATTATCAAACATGTTATGAACATTATTTTTAAAAATTTGGAATCCAATTTTGAAATTTCCTATGAAACACATCCAAAAACATTGGAACCATGAAATATAATATTTTTTAATTGATTCTCTTGTTTTCAAATCACTAACCAAATGCACCCTTAGATTTGGAACGAACTGTCTGTTACATATCAGCTAAGCTATGCTTTACAATTTGTACCATAGCATACTAACATGGTAGAAGTTCCAAAAATCCTCATTATGCAGTAGTTGAGCTTGATGCTAAAATATTGTTACATTTTATATCTAGTGTTTGATGTAATTTATTATGCTGATTATACCTTGATCACATAATCATTCTTATGCAATAATGCATTCATAAAAGAAAAGGGTTAAATTTACATATTTGGTTGTTATCATCTAGAGAAAGTTAGAATTTAGTTCATGTGGTTATATCAAACCATAGTGATGAATTTAACTTTTAAACCATAGGGATTAAATTCTAACTTTCTTTGAAATATGAGGAACAAATTTGTAATGTAACCTAATAAATGATTATGCAATAGTGCAAATCAACATTCTTTTTTAGAACATTTCAATTCAAACAAAGAGTGAGGGGAGGTTTTCCAACGTCTTGATTAGTTGGACTATGTTTAAGTTGGTGTCTATAATTGGATACTTTTGCTCTAATATTTCAGATATATTATGGAAGCTTCATGTTTGGTTGAAACTGAATTCTTATGGCCAAAGTGAGCTTAGCTCAATGGTAATTGGCATGACCTTCCTCTCTAGAGGTTGAAGGTTCAATTCCCCATCCCCACAGTTGTTATACTCAAAAAAAAAAAAAAAAGGAATTCTTGTGCCCTTGTCTCTGACTTAATGTCTAGTTACTGTGTCACGATACTTTTGGATTTTTAAATTGCATTCTTGAATTATGACATTACATTGCATCTTTCATCGGTACTTGTGTACCCATTTTGCAGTTGTTAAAGAAAACATCTGCTCGTCAGATTAAGAAGACTACATCCCCATTTGGTTATCTTCATCAGGCTTTACAGAAGGTTAGCAAAATTTCCGTTACAATTGTTTTTTTTTCAGAATTTACTACTCATCATCACTCCAGTTTGGAAAATGAACCATAAAGGTGTGATGTGAATAAACCTTTGACATAGGATTCAAGGATAATATAGTTTATTAGCTGACTGCCATACTAGTAATTCTACAGTTACTAATGTGTGAATTTTAGTTCAAATTTCCTATTATTAATTTCCCCTACGATTGACCTCATCATTCAACAAGCTGAATATTTCCTTGTCACCTTTATCAGGGCTGCGACATGTCAATAAAGGATCTGGAAGAACTGTTAACCCTCCTCGCTGAGAAGAAAAGAAAAATGGAGCAAGAAGAAGCAGAGACAAATATGCAAATTTTACTTGGCTTCTTGTATTGCTTGAGAAAGCAAAAGCTTGAGGAGCTCAATGAGGTCTCTTTTACTTCCATTGTCATTTTTTGTTTCTTGCTTATTATAAATTGGTATATGAATTTTATGAAAACGGTTTGTTGTTCATTTTTTTTTAAAGTACATGAATAACTTTATGTGTTCTTATTAAATTTTTGTTTTCCCCCCTGAGGCTTGGTTATCCTGTCTGTAATTTGATTGGCTGCTTTGCAGTGTGTAAAAGATGGTAATGACTAGATCTAAGAAAGAGGTCTGAGTAACAGAATGTTTAGAATTCGAGTAAATTTAACTTTATCAAGTTAGAAAAGAACATAGTTTTATTGGAAGAAGTACAAACCTCCTTTGATTAATGACTGAGACTAAATATGTAGTCTGGACATAACTAAATTTGTCCAGGGATCTAAATTCCTATTTATGGAACTCTAGATTTCAATCAACTCTCGGAACATTTTTTTTTATATTTACTTTAACATATCGTTGAGTTTTTATTTTCCTTTGTTTTGGACAATGTTCAACTGGTTGAATAATTAGTTTTATGTCGATGCTTTAACTCATTTGTAAATATGTCTACGATTGTACTGCATGGCTTAAGATAAATCATAAATCACCATGTTTTTGTACAACCTTACATGGAGTCTGGCTTAGTTAAGTTACATGTATGTAAAGTACTAAAGTGTATTATTTTTTTTTTAATAGGAGTATGTAAAGGGTAGTATGTATGTATTACCTGCATGGTAGAAGGTTGAGTGTTGGTGAATGCACCAAGTATTTTCCCATTATAAATGCAGAGAAGCTCTCATTGATCAATTCAAGAATATCTTGTGTTAATTTGCTTCATTATTTATTTATTTTCCAATTATAGATACAAGCTGATCTTCACTATATTAAGGAAGATATTAGTTCTGTGGAGAAACAGAGATTGGAACTATATAGGTCTAAAGAAAGGTATTCGGGCAAAATGAAAATGCTAGCCGATGACACTGTATCCACAAAATCACGGTCTTCATTAATTGACAAGCATGGAAATGGGATTAATTGTGGCACCCAACGGTCACAAGGCTGGATGAGTTCTGGGACTTCTCCCAACCCTAGAGCAGATGCAAAGATACAATTAGGCTCCCAGGGACCACTTAGAAAAGATGCTTATTGTAGTTCAGATTTGCATTCTGTTGCACAATCTGGACTAGCTGTAGCAAATAAAAGGCGGGTTCATACACAGGTAAAGCTTTTATTTGAATACCACTTTTACGGGAAAGCTATCACAATGGTTTACTACGGTCTGGCTTCTTAGTTAAAAATTCAATGGGCATCTTTCTGTTAACAAAATTTCAGTGTTTTGGAGATAGACTATTTAACCTCCTTGATGAGTATTCTCTGAAATAACAATCTGGTTGGTTATTGTGAAGACTGAAGACTGAAGATTTTAGATGTTGTCTTCCTGGTTCTAATGGTGTATACTATTGCAAATATCATCATGACTCTCAAGCTATTTATTAACGTTTGTGTTCTGTTTTTCGTTTCTATAATAAAAATATGTATTACTTCTGGTTAGGGAGAAAAAGAAAGATTTGGGGATTTAATTCTTTTTTTTCTTTTAAAGAAAAGGAGAGAGGGACTAGGAAAAGAATTTGTCACCTAGAGCAAAGACGCAATGAATGGGGAAACTATGTGTACAATAAGGAAAGTGTGGTCAGCCGATTAGGAAGCGTTCCTTATAATTTGCTTATTATGTCAACATCTTTTGAAACTTGACGGATATCTAGTTTGGGCAACCTATACATTAATTTATTTTCTATTTCTTGCATATTGATCTTTTTGTGAAACTAGGAAAAGTTTAGCTTGTCGTGCTGATTGAATCCATCTAGTGATGATATTTTGTCAACCGATCTTAAGTTAAGAAATAGCATTGTTAATGTGAAATGGAATGTCTATGTTACTGTTTGGTTTAATTATTGACATTTAGGATCTGTCCTTTCTTATAGTTTAATGAATTGCAAGATTGCTATCTGCAAAAACGACGAAATTGGAGGAAGCAATTGTATAAACAAGAAGATAGGGATATAAAGTTCAGCAGTGGGGAGAGTTATAATCCAGCTCTTGAAGATTTTCAATCTGTGCTAACTTCTTTTATGCGATACAGGTATAATTTTTATTTACTTATTTTAGTTATTTGGCATTGGTTTCTCTTGTGAGTGTTAACTGTCTAATAATTTACTTCTGTCTTATCACATGGCCTATGGATTAGCCGATTGAGGGTCATTGCGGAACTTCGACATGGCGATCTTTTTCATTCTGCAAATATTGTATCAAGGTGAGTGATTGGTATTCACATTATACATTCCCATGGGTTGGGAGACTCTGCTGGAGCAATTTTATTTTACTTGATCATTCTAAAACTTGAATTAATCACAATACACTTTAATTTGGACACATCATAGTATGATTCAGCCGATGGTAGGTATCTGGTTTAAATTAAAAATAAGTTTAGTTGAATTTGAAGTTATTTTTTGCCCTATGCTACCTCAAACTTCTTGTTCACAACATTAAAGGATGACCACATAATTGTTACGGATTTTGAATAATGAGATTCTTGTGACTCACTTTTATTTTCACAAGTTACTTTGAACTTTCTTCTATCACCATTTTGTCTTTCACTGAGATAAGTGCATATCCATGTTCTTTAGGATTTGTCCTGAGTTCTAAAATTTCGGAAATGATAATCATGTCATTCTTGTTTCAGTATAGAGTTTGATCGTGATGATGAGTTCTTTGCAACTGCTGGTGTCTCGCGTTGCATCAAGGTTTTTGAGTTTAGCTCGGTAAGGATTTAATTTTTATTCACTGGACAACTAAAAGGTATTAATAGTTAAGGAGACAAATGAAACATTGGAATTGTTTTTTAAATATTCATTTCACGTTACAGGGAGCTATTGGAATTGTTTATTGCTAGCCATTTGTTTGTTTTGAAAGTTAAATTTTCTTTCATTCCTTTCGTAAAGTGTATATGTAAGAGTCAATCTACGGAAATGTTAACATCTCTAGATTTTATGAAATTGGGATGTTAAGGAAATCTCATCCCAAAAATCTGGGAATGGGAACTTGTGTAAATTTTTTGAATTCATTGATTAAACTTTATTACCTACGTACATGGATTATAATTCATTCCTTTCAATACTCCAAATTCATATACAAAAGCAATAAATGAACATACGTAATTTCTGTGGTTTTAAAAATGAGTTGGTTATTTGGGGCTTAAGCATGAGGCAAAGAAACAGCTAGAGCTTTTCTTGTGAGGTGTGCGATTGAAAATGTGAAAATATAGTATTATGAATAATAAGATCATGAAAGTCTTAAAAGTAGTTTTGTAGGAAATTATTGAGAGGAATGAACCATTTTAAAATTATTTATTGGTTTTGTAATAAAAAAAGTTTTAAAAGTAACAAACAAAAAATAGAAGTTTAAGCACGGCTCAGCTAGACTTTTCTTGTGAGGTGCACAGTTGAAGAATATAGATAGTTTTATATATATGCCAAAATATAGTATTGTTAATAATGATAATGAAATTCTTAATTCTTAATTCTTAAAAGATTAAAAGATTAAAGGTTTTGTAGGATTGACTAAAATGAACCTTTTTAAAAAGTATATAATTTAATAAAATTTTAATAGATCGGATCATAGTATTAACTGATGGTGTTTATTATATATTTTTCTTGATATAAATCCTGAATATTAATTGTTTTTATTAGTAAGGTAATAACATGTGATGCTTCAATACTATTTTCTTGATATAAGTCCATGTTGTAACCCCTTTTGTATCTCTCTTTTGAAAAAAATGGAAAAAATGAAACATGTAATGTTTCAAAAAAGAAAGAAGTTAAGAACATGTAAGGTATGATGACGAGCACAACTGAAAAATATTGGTTTATGCAACTTATAAGTTAGATCTATATGTGTAAATTATTGTGGCCTTGCATAGATCATCCATGGGGGATATACAGTGCACAACTCTGCATAATGCTTTATGTTCATGGCCACATGATATACTTGTATCCCTTTTTTTTATTTAATTCTCTAGTATATATGATGTGAATATAAATGATTTACCAATTATCAATAGCACTTGCTGTTTCCAGGTAGTAAATGAACCAGCAGATGTTCACTTCCCCGTTGTGGAGATGTCTACACGATCAAAGCTTAGCTGCTTGAGCTGGAATAAATACACAAAAAGTCATATTGCTAGTAGTGATTATGAGGGGATAGTAACTGTCTGGGATGTAAATACTCGTCAGGTGGTGGCCATTATCTATTTTAAGTTTCTAGAGCTTGTCGATTATCTCCATTATTTGGTCATATTTCTCTTTTTTAACAGGCTCTTTTCCTTTTAGAGTGTTATGGAGTATGAAGAACATGAAAAACGAGCTTGGAGTGTTGATTTTTCACGTTCTGAACCTTCCATGCTTGTATCCGGCAGTGATGACTGTAAGGTATTTGACTGAAGCAAACACTCTTTTGAGTTGGTGAAGATTATTGATCTTCGAAATTGAATTTGTGATTGATGAGCCATAAGTGAGGATTAACCAGCAATTCCCTAATTTTTGCAATGGAAAACTTTCAACTTTTTCAATGGTTAACTTTGTAGCAGAGGATATTTGACTCATCAACTGTGGCACTTGGAAAATGCTATCCTTTGTTGAGTTTTATCTGTCAATTCACCATTATATTTTGGATCCATACTGAAACTGTTACTACTACATGATTTGTAGAAATTGCCCAATACAATGGGGCATCACTCAGCTCTGGGTCAAAGAGTTAATAGTTTGGTCAATTCTAGTTGGTTTTTGTTGAAACAAGTTATATTCCTGCTACGACCTTATTTGAACAAATTGTATTCTTGAGTTCTAAAAAGTTATATTCCTGCTAACTAACACCAAGTTACAACACTAGGTTCTTTTTATGTTTTTGTCTGAAACTATTCTCAGGTGCATTGTTCTCTTTCTGTTAACAGGTCAAAATTTGGTGCACAAGGCAGGAAGCTAGCGTGTTTAACATTGACATGAAAGCAAATGTTTGCTCCGTCAAGTACAACCCAGGATCTAGCTTATACGTGGCTGTATGTCTATTTTGCTCTATTTACACGAATATCATAAATATTGAACTGCAATTTTCTGTGTGTGTGTTTTTTTTATAATTCCTTTTAACCTAAGATTTCTTGAGTTTCCCTGATTAACCCTTTGCTTGCACAGTTTGGCAAATCCTTCTCTCCCTAATACTTGAGCATTTTCAGGTGGGTTCCGCTGATCATAATATCCACTACTACGACTTGAGAAATATCAGCCAACCTCTGCATGTTTTTAATGGCCATAAGAAAGCTGTTTCTTATGTGAAATTCTTGTCAAACAACGAACTCGCTTCTGCTTCAACTGACAGTACTCTGCGATTATGGGATGTAAAGGAAAATCTGCCTGTGAGTTATCTTCTTGATATGTTATCCATTGACATCCAAAATGAAGTTAATCTTCATGAAATTCTGCTCCTTGTTCCCCTCTTTTTTGTCACTCGTTGGTCTTTCTTGCCAATTCCCAAAACAGGTTTGAAAGCCAAAGCATAAAACCATGTGGAAAGTTGCTAGACTTCTTAAACTTTTTTCACAAAGGATACAATGTGGTTATTGTGCTTGCCGGAACTAGGGACCCTGTCAATTTTATGGCTTAGACACCTTTTCTTCTCCCGCTCTCTCTAGTTCTCATAGATTTCTGTAAATTTAATAAAGTTCTCTGTTAAGCAAATTTAGAATGTTAGTCATGATGAAAAAGTTGTCGACTGGAAGAACTAACGTATATTTGGCATGTTTGGGAGTAATTCTGAAATGGTTAAAATTACTTGTCATTTTCAGAATCACTCCAAAAATGGCCTTTAATCATTCAAAATTCAACTTTGATAGTATGAAATTTGTGTTAAAAGTGTAAAATTAAACATTAAATTGATTTTGAGTGATTAAAGATATGTTTCGAGGTGATTTTGAACAAAACAAAAGTAATTTTAACCAATTCAAAATCACTTTCAAACATGCACATATTCAAACCGGTTACATTTTGGTTTTGTGCATATAGAGCTAACGTATATCAATACTGATTCGTCTTTTTATTATTTCAGCTGTGTGTGTATAGAGGACACACAAACGAGAAGAATTTTGTGGGTCTAACAGTAAACAGTGAATACATAGCATGCGGCAGTGAAACTAATGAAGTTTTCATATACCACAAGGTTAACATTTATATTCTTTCACCACCTTGTTTGCTGCTAGATAAATTTTTGCTTGTGATAAAGATCAAGTTCTTAAAAGGAATTTACTTGCAGGCAATATCAAAACCAATGGCTTGGCATAGGTTTAGTTCAGATTTGGAAGATAATGATGAAGATGCAGGTTCATATTTCATAAGTGCTGTTTGTTGGAAGAGTGACAGCCCAACAATTTTAACAGCAAACAGCCAAGGAACAATCAAAGTGCTGGTTCTTGCACCCTGAATCACAGCATTAGAAATGACTTGAAAGACAAGAAAAGAATAATAAGAAGGTACCAAAATTCCATGCCCTCAATCTGTGTATATGGTGATATTGATATTACTTCCATGTATATCAGCTTGTAAATTTGGTTTTCATTCAACATCTGTGGAAAGGGTGGATTATGCAACTATGTGGACTCCATCTCCTCACTTAGATATTTCCCCATCTTTTTTTCCTTTTTGGGTTAGGGGTAGTGGGAATATTAGTAGAATTATGTGATTATTTGCAAGATAAGTTTAGCATGAATGGTTATTTGTTGGAGAGTTAAAAGTTCAATACATAGTTTGAATACTGCAAATGTTTGTATATTATAACATTGAACTTTGATGGGGAAAGACAAATGTAGACATTCTTAAATACTTAGAAGTTATGTAAAGGAAATGAAATGAAATGAAATCTAAACTTGATTATTGTCATGCAA

mRNA sequence

TTTTCACTAACCCCATTCATTCCTTTCCTTTCTTCTTCCGTACGCTAATCGCTAACCCCTTCCTTTCCCTTCTTCTTCCTTCTTTAAACCTCTCTCTTTCTTCCTTCCCCCCTTCAATGGCAGCCACATAATTTCCATATATCTTTTCTCCTTAACAATCTTCACTTATGGGTGGCGGTTCCACTTCCATTGGAGCTTTGGTTCCTACTGTCAAACCTGAGCCCTCTACTGTCGACTCTACCGCTTCCCCTACTCCCCCTCCCTTACCTCCTACTACTCCTCCTCCCCCTCCTCCGCCCCCCTCCGACCTAATGCCTGCTCAATTCGAACCTGGGGATACCAATGCCGCCACTGCGTCTCAACCCAATACCGATGATTTAGATAAGGATATGCTTTGCCCTATTTGCATGCAGATCATTAAAGATGCCTTTCTCACTACTTGTGGACATAGCTTTTGCTATATGTGTATTGTTACTCATCTTCGGAATAAGAGTGATTGTCCTTGCTGCGCTCATTTCCTCAGGAGTAACAGCATTTTCCCCAATATTTTGCTTGATAAGTTGTTAAAGAAAACATCTGCTCGTCAGATTAAGAAGACTACATCCCCATTTGGTTATCTTCATCAGGCTTTACAGAAGGGCTGCGACATGTCAATAAAGGATCTGGAAGAACTGTTAACCCTCCTCGCTGAGAAGAAAAGAAAAATGGAGCAAGAAGAAGCAGAGACAAATATGCAAATTTTACTTGGCTTCTTGTATTGCTTGAGAAAGCAAAAGCTTGAGGAGCTCAATGAGATACAAGCTGATCTTCACTATATTAAGGAAGATATTAGTTCTGTGGAGAAACAGAGATTGGAACTATATAGGTCTAAAGAAAGGTATTCGGGCAAAATGAAAATGCTAGCCGATGACACTGTATCCACAAAATCACGGTCTTCATTAATTGACAAGCATGGAAATGGGATTAATTGTGGCACCCAACGGTCACAAGGCTGGATGAGTTCTGGGACTTCTCCCAACCCTAGAGCAGATGCAAAGATACAATTAGGCTCCCAGGGACCACTTAGAAAAGATGCTTATTGTAGTTCAGATTTGCATTCTGTTGCACAATCTGGACTAGCTGTAGCAAATAAAAGGCGGGTTCATACACAGTTTAATGAATTGCAAGATTGCTATCTGCAAAAACGACGAAATTGGAGGAAGCAATTGTATAAACAAGAAGATAGGGATATAAAGTTCAGCAGTGGGGAGAGTTATAATCCAGCTCTTGAAGATTTTCAATCTGTGCTAACTTCTTTTATGCGATACAGCCGATTGAGGGTCATTGCGGAACTTCGACATGGCGATCTTTTTCATTCTGCAAATATTGTATCAAGTATAGAGTTTGATCGTGATGATGAGTTCTTTGCAACTGCTGGTGTCTCGCGTTGCATCAAGGTTTTTGAGTTTAGCTCGGTAGTAAATGAACCAGCAGATGTTCACTTCCCCGTTGTGGAGATGTCTACACGATCAAAGCTTAGCTGCTTGAGCTGGAATAAATACACAAAAAGTCATATTGCTAGTAGTGATTATGAGGGGATAGTAACTGTCTGGGATGTAAATACTCGTCAGAGTGTTATGGAGTATGAAGAACATGAAAAACGAGCTTGGAGTGTTGATTTTTCACGTTCTGAACCTTCCATGCTTGTATCCGGCAGTGATGACTGTAAGGTCAAAATTTGGTGCACAAGGCAGGAAGCTAGCGTGTTTAACATTGACATGAAAGCAAATGTTTGCTCCGTCAAGTACAACCCAGGATCTAGCTTATACGTGGCTGTGGGTTCCGCTGATCATAATATCCACTACTACGACTTGAGAAATATCAGCCAACCTCTGCATGTTTTTAATGGCCATAAGAAAGCTGTTTCTTATGTGAAATTCTTGTCAAACAACGAACTCGCTTCTGCTTCAACTGACAGTACTCTGCGATTATGGGATGTAAAGGAAAATCTGCCTGCAATATCAAAACCAATGGCTTGGCATAGGTTTAGTTCAGATTTGGAAGATAATGATGAAGATGCAGGTTCATATTTCATAAGTGCTGTTTGTTGGAAGAGTGACAGCCCAACAATTTTAACAGCAAACAGCCAAGGAACAATCAAAGTGCTGGTTCTTGCACCCTGAATCACAGCATTAGAAATGACTTGAAAGACAAGAAAAGAATAATAAGAAGGTACCAAAATTCCATGCCCTCAATCTGTGTATATGGTGATATTGATATTACTTCCATGTATATCAGCTTGTAAATTTGGTTTTCATTCAACATCTGTGGAAAGGGTGGATTATGCAACTATGTGGACTCCATCTCCTCACTTAGATATTTCCCCATCTTTTTTTCCTTTTTGGGTTAGGGGTAGTGGGAATATTAGTAGAATTATGTGATTATTTGCAAGATAAGTTTAGCATGAATGGTTATTTGTTGGAGAGTTAAAAGTTCAATACATAGTTTGAATACTGCAAATGTTTGTATATTATAACATTGAACTTTGATGGGGAAAGACAAATGTAGACATTCTTAAATACTTAGAAGTTATGTAAAGGAAATGAAATGAAATGAAATCTAAACTTGATTATTGTCATGCAA

Coding sequence (CDS)

ATGGGTGGCGGTTCCACTTCCATTGGAGCTTTGGTTCCTACTGTCAAACCTGAGCCCTCTACTGTCGACTCTACCGCTTCCCCTACTCCCCCTCCCTTACCTCCTACTACTCCTCCTCCCCCTCCTCCGCCCCCCTCCGACCTAATGCCTGCTCAATTCGAACCTGGGGATACCAATGCCGCCACTGCGTCTCAACCCAATACCGATGATTTAGATAAGGATATGCTTTGCCCTATTTGCATGCAGATCATTAAAGATGCCTTTCTCACTACTTGTGGACATAGCTTTTGCTATATGTGTATTGTTACTCATCTTCGGAATAAGAGTGATTGTCCTTGCTGCGCTCATTTCCTCAGGAGTAACAGCATTTTCCCCAATATTTTGCTTGATAAGTTGTTAAAGAAAACATCTGCTCGTCAGATTAAGAAGACTACATCCCCATTTGGTTATCTTCATCAGGCTTTACAGAAGGGCTGCGACATGTCAATAAAGGATCTGGAAGAACTGTTAACCCTCCTCGCTGAGAAGAAAAGAAAAATGGAGCAAGAAGAAGCAGAGACAAATATGCAAATTTTACTTGGCTTCTTGTATTGCTTGAGAAAGCAAAAGCTTGAGGAGCTCAATGAGATACAAGCTGATCTTCACTATATTAAGGAAGATATTAGTTCTGTGGAGAAACAGAGATTGGAACTATATAGGTCTAAAGAAAGGTATTCGGGCAAAATGAAAATGCTAGCCGATGACACTGTATCCACAAAATCACGGTCTTCATTAATTGACAAGCATGGAAATGGGATTAATTGTGGCACCCAACGGTCACAAGGCTGGATGAGTTCTGGGACTTCTCCCAACCCTAGAGCAGATGCAAAGATACAATTAGGCTCCCAGGGACCACTTAGAAAAGATGCTTATTGTAGTTCAGATTTGCATTCTGTTGCACAATCTGGACTAGCTGTAGCAAATAAAAGGCGGGTTCATACACAGTTTAATGAATTGCAAGATTGCTATCTGCAAAAACGACGAAATTGGAGGAAGCAATTGTATAAACAAGAAGATAGGGATATAAAGTTCAGCAGTGGGGAGAGTTATAATCCAGCTCTTGAAGATTTTCAATCTGTGCTAACTTCTTTTATGCGATACAGCCGATTGAGGGTCATTGCGGAACTTCGACATGGCGATCTTTTTCATTCTGCAAATATTGTATCAAGTATAGAGTTTGATCGTGATGATGAGTTCTTTGCAACTGCTGGTGTCTCGCGTTGCATCAAGGTTTTTGAGTTTAGCTCGGTAGTAAATGAACCAGCAGATGTTCACTTCCCCGTTGTGGAGATGTCTACACGATCAAAGCTTAGCTGCTTGAGCTGGAATAAATACACAAAAAGTCATATTGCTAGTAGTGATTATGAGGGGATAGTAACTGTCTGGGATGTAAATACTCGTCAGAGTGTTATGGAGTATGAAGAACATGAAAAACGAGCTTGGAGTGTTGATTTTTCACGTTCTGAACCTTCCATGCTTGTATCCGGCAGTGATGACTGTAAGGTCAAAATTTGGTGCACAAGGCAGGAAGCTAGCGTGTTTAACATTGACATGAAAGCAAATGTTTGCTCCGTCAAGTACAACCCAGGATCTAGCTTATACGTGGCTGTGGGTTCCGCTGATCATAATATCCACTACTACGACTTGAGAAATATCAGCCAACCTCTGCATGTTTTTAATGGCCATAAGAAAGCTGTTTCTTATGTGAAATTCTTGTCAAACAACGAACTCGCTTCTGCTTCAACTGACAGTACTCTGCGATTATGGGATGTAAAGGAAAATCTGCCTGCAATATCAAAACCAATGGCTTGGCATAGGTTTAGTTCAGATTTGGAAGATAATGATGAAGATGCAGGTTCATATTTCATAAGTGCTGTTTGTTGGAAGAGTGACAGCCCAACAATTTTAACAGCAAACAGCCAAGGAACAATCAAAGTGCTGGTTCTTGCACCCTGA

Protein sequence

MGGGSTSIGALVPTVKPEPSTVDSTASPTPPPLPPTTPPPPPPPPSDLMPAQFEPGDTNAATASQPNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTTSPFGYLHQALQKGCDMSIKDLEELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINCGTQRSQGWMSSGTSPNPRADAKIQLGSQGPLRKDAYCSSDLHSVAQSGLAVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSSGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMKANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTLRLWDVKENLPAISKPMAWHRFSSDLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP
Homology
[Close]
BLAST of Lsi02G010800 vs. ExPASy Swiss-Prot
Match: P93471 (E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1)

HSP 1 Score: 840.5 bits (2170), Expect = 1.3e-242
Identity = 443/700 (63.29%), Postives = 519/700 (74.14%), Query Frame = 0 

Query: 7   SIGALVP-TVKPEPSTVDSTASPTPPPLPPTTPPPPPPPPSDLMPAQFEPGDTNAATA-- 66
           S+G LVP  VKPEPS   ST                               DT AA    
Sbjct: 5   SVGPLVPAVVKPEPSKNFST-------------------------------DTTAAGTFL 64

Query: 67  SQPNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSI 126
             P   DLDKD LCPICMQIIKDAFLT CGHSFCYMCI+THLRNKSDCPCC H+L ++++
Sbjct: 65  LVPTMSDLDKDFLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNSNL 124

Query: 127 FPNILLDKLLKKTSARQIKKTTSPFGYLHQALQKGCDMSIKDLEELLTLLAEKKRKMEQE 186
           FPN LLDKLLKKTS RQI KT SP  +  QA+QKGC++++K+L+ LL LL EKKRKMEQE
Sbjct: 125 FPNFLLDKLLKKTSDRQISKTASPVEHFRQAVQKGCEVTMKELDTLLLLLTEKKRKMEQE 184

Query: 187 EAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYSGKMK 246
           EAE NMQILL FL+CLRKQK++EL E+Q DL +IKEDI +VEK R++LYR+++RYS K++
Sbjct: 185 EAERNMQILLDFLHCLRKQKVDELKEVQTDLQFIKEDIGAVEKHRMDLYRARDRYSVKLR 244

Query: 247 MLADDTVSTKSRSSLIDKHGNGINCGTQRSQGWMSSGTSPNPRADAKIQLGSQGP--LRK 306
           ML DD+   KSR S +D + +G+       +G +SSG S   + D K Q+ S G    R+
Sbjct: 245 ML-DDSGGRKSRHSSMDLNSSGLASSPLNLRGGLSSG-SHTKKNDGKSQISSHGHGIQRR 304

Query: 307 DAYCSSDLHSVAQSGLAVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSSGE 366
           D    SD   + QSGLA+  K+RVHTQFN+LQ+CYLQKRR    + + Q++RD  F S E
Sbjct: 305 DPITGSDSQYINQSGLALVRKKRVHTQFNDLQECYLQKRRQAADKPHGQQERDTNFISRE 364

Query: 367 SYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSRC 426
            Y+  L+DFQSVLT+F RYSRLRVIAE+RHGD+FHSANIVSSIEFDRDD+ FATAGVSR 
Sbjct: 365 GYSCGLDDFQSVLTTFTRYSRLRVIAEIRHGDIFHSANIVSSIEFDRDDDLFATAGVSRR 424

Query: 427 IKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIVTVWDVNTRQ 486
           IKVF+FS+VVNEP D H PVVEM+TRSKLSCLSWNKY K+ IASSDYEGIVTVW + TR+
Sbjct: 425 IKVFDFSAVVNEPTDAHCPVVEMTTRSKLSCLSWNKYAKNQIASSDYEGIVTVWTMTTRK 484

Query: 487 SVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMKANVCSVKYN 546
           S+MEYEEHEKRAWSVDFSR++PSMLVSGSDDCKVK+WCT QEASV NIDMKAN+C VKYN
Sbjct: 485 SLMEYEEHEKRAWSVDFSRTDPSMLVSGSDDCKVKVWCTNQEASVLNIDMKANICCVKYN 544

Query: 547 PGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTLRL 606
           PGS  Y+AVGSADH+IHYYDLRNIS+P+HVF GHKKAVSYVKFLSN+ELASASTDSTLRL
Sbjct: 545 PGSGNYIAVGSADHHIHYYDLRNISRPVHVFTGHKKAVSYVKFLSNDELASASTDSTLRL 604

Query: 607 WDVKENLPA-------------------------------------ISKPMAWHRFSS-D 664
           WDVK+NLP                                      ISKP+ WHRF + D
Sbjct: 605 WDVKQNLPVRTFRGHANEKNFVGLTVRSEYIACGSETNEVFVYHKEISKPLTWHRFGTLD 664

[Close]
BLAST of Lsi02G010800 vs. ExPASy Swiss-Prot
Match: P43254 (E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV=2)

HSP 1 Score: 828.2 bits (2138), Expect = 6.7e-239
Identity = 433/673 (64.34%), Postives = 510/673 (75.78%), Query Frame = 0 

Query: 29  TPPPLPPTTPPPPPPPPSDLMPAQFEPGDTNAATASQPNTDDLDKDMLCPICMQIIKDAF 88
           T P +P   P P      +   A     D   +  S+    DLDKD+LCPICMQIIKDAF
Sbjct: 6   TDPVVPAVKPDPRTSSVGE--GANRHENDDGGSGGSEIGAPDLDKDLLCPICMQIIKDAF 65

Query: 89  LTTCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTTSPF 148
           LT CGHSFCYMCI+THLRNKSDCPCC+  L +N ++PN LLDKLLKKTSAR + KT SP 
Sbjct: 66  LTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLDKLLKKTSARHVSKTASPL 125

Query: 149 GYLHQALQKGCDMSIKDLEELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELN 208
               +ALQ+GCD+SIK+++ LLTLLAE+KRKMEQEEAE NMQILL FL+CLRKQK++ELN
Sbjct: 126 DQFREALQRGCDVSIKEVDNLLTLLAERKRKMEQEEAERNMQILLDFLHCLRKQKVDELN 185

Query: 209 EIQADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINC 268
           E+Q DL YIKEDI++VE+ R++LYR+++RYS K++ML DD  +  +     +K+  G N 
Sbjct: 186 EVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPSTRNAWPH--EKNQIGFNS 245

Query: 269 GTQRSQGWMSSGTSPNPRADAKIQLGSQGPLRKDAYCSSDLHSVAQSGLAVANKRRVHTQ 328
            +   +G    G   N + + K Q  S G  +KDA   SD  S+ QS +++A K+R+H Q
Sbjct: 246 NSLSIRGGNFVGNYQNKKVEGKAQGSSHGLPKKDALSGSDSQSLNQSTVSMARKKRIHAQ 305

Query: 329 FNELQDCYLQKRRNWRKQLYKQEDRDIKFSSGESYNPALEDFQSVLTSFMRYSRLRVIAE 388
           FN+LQ+CYLQKRR    Q   +++ D      E Y+  L DFQSVLT+F RYSRLRVIAE
Sbjct: 306 FNDLQECYLQKRRQLADQPNSKQENDKSVVRREGYSNGLADFQSVLTTFTRYSRLRVIAE 365

Query: 389 LRHGDLFHSANIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRS 448
           +RHGD+FHSANIVSSIEFDRDDE FATAGVSRCIKVF+FSSVVNEPAD+  P+VEMSTRS
Sbjct: 366 IRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMSTRS 425

Query: 449 KLSCLSWNKYTKSHIASSDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVS 508
           KLSCLSWNK+ K+HIASSDYEGIVTVWDV TRQS+MEYEEHEKRAWSVDFSR+EPSMLVS
Sbjct: 426 KLSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVS 485

Query: 509 GSDDCKVKIWCTRQEASVFNIDMKANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQP 568
           GSDDCKVK+WCTRQEASV NIDMKAN+C VKYNPGSS Y+AVGSADH+IHYYDLRNISQP
Sbjct: 486 GSDDCKVKVWCTRQEASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQP 545

Query: 569 LHVFNGHKKAVSYVKFLSNNELASASTDSTLRLWDVKENLPA------------------ 628
           LHVF+GHKKAVSYVKFLSNNELASASTDSTLRLWDVK+NLP                   
Sbjct: 546 LHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVN 605

Query: 629 -------------------ISKPMAWHRFSS-DLEDNDEDAGSYFISAVCWKSDSPTILT 664
                              I++P+  HRF S D++D +E+AGSYFISAVCWKSDSPT+LT
Sbjct: 606 SEYLACGSETNEVYVYHKEITRPVTSHRFGSPDMDDAEEEAGSYFISAVCWKSDSPTMLT 665

[Close]
BLAST of Lsi02G010800 vs. ExPASy Swiss-Prot
Match: Q9R1A8 (E3 ubiquitin-protein ligase COP1 OS=Mus musculus OX=10090 GN=Cop1 PE=1 SV=2)

HSP 1 Score: 384.4 bits (986), Expect = 2.6e-105
Identity = 242/659 (36.72%), Postives = 355/659 (53.87%), Query Frame = 0 

Query: 69  DDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCAHFLRS-NSIFPNI 128
           +D   D +CPIC  +I++A++T CGHSFCY CI   L + + CP C + + + + ++PN 
Sbjct: 130 EDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNF 189

Query: 129 LLDKLLKKTSARQIKK-------TTSPFGYLHQALQK--GCDMSIKDLEE---LLTLLAE 188
           L+++L+ K   R  +K        +S  G+  Q  Q   G D    DL     +L LL +
Sbjct: 190 LVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQ 249

Query: 189 KKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSK 248
           KK+++E E     +QIL+ FL   R+ K E+L +IQ +L  ++EDI  VE+         
Sbjct: 250 KKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEM-------- 309

Query: 249 ERYSGKMKMLADDT------VSTKSRSSLIDKHGNGINCGTQRSQGWMSSGTSPNPRADA 308
              SG    +++D+        + S SS+ID         T+ SQ    SGTS       
Sbjct: 310 ---SGLYSPVSEDSTVPQFEAPSPSHSSIID--------STEYSQPPGFSGTSQT----- 369

Query: 309 KIQLGSQGPLRKDAYCSSDLHSVAQSGLAVANKRRVHTQFNELQDCYLQKRRNWRKQLYK 368
                     +K  + +S L S          ++R+   F +L+ CY   R +       
Sbjct: 370 ----------KKQPWYNSTLAS---------RRKRLTAHFEDLEQCYFSTRMS------- 429

Query: 369 QEDRDIKFSSGESYNPALEDFQSVLTSFMRYSRLRVIAELRH-GDLFHSANIVSSIEFDR 428
                 + S        L++FQ  L+ F RY+ +R +A L +  DL++ ++IVSSIEFDR
Sbjct: 430 ------RISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDR 489

Query: 429 DDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDY 488
           D ++FA AGV++ IKV+E+ +V+ +  D+H+P  EM+  SK+SC+SW+ Y K+ +ASSDY
Sbjct: 490 DCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDY 549

Query: 489 EGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFN 548
           EG V +WD  T Q    Y+EHEKR WSVDF+  +P +L SGSDD KVK+W T  + SV +
Sbjct: 550 EGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVAS 609

Query: 549 IDMKANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN 608
           I+ KANVC VK++P S  ++A G ADH +HYYDLRN  QP+ VF GH+KAVSY KF+S  
Sbjct: 610 IEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGE 669

Query: 609 ELASASTDSTLRLWDV-------------------------------KEN------LPAI 663
           E+ SASTDS L+LW+V                                EN         +
Sbjct: 670 EIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGL 729

[Close]
BLAST of Lsi02G010800 vs. ExPASy Swiss-Prot
Match: Q8NHY2 (E3 ubiquitin-protein ligase COP1 OS=Homo sapiens OX=9606 GN=COP1 PE=1 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 7.5e-105
Identity = 241/659 (36.57%), Postives = 355/659 (53.87%), Query Frame = 0 

Query: 69  DDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCAHFLRS-NSIFPNI 128
           +D   D +CPIC  +I++A++T CGHSFCY CI   L + + CP C + + + + ++PN 
Sbjct: 128 EDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNF 187

Query: 129 LLDKLLKKTSARQIKK-------TTSPFGYLHQALQK--GCDMSIKDLEE---LLTLLAE 188
           L+++L+ K   R  +K        +S  G+  Q  Q   G D    DL     +L LL +
Sbjct: 188 LVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQ 247

Query: 189 KKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSK 248
           KK+++E E     +QIL+ FL   R+ K E+L +IQ +L  ++EDI  VE+         
Sbjct: 248 KKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEM-------- 307

Query: 249 ERYSGKMKMLADDT------VSTKSRSSLIDKHGNGINCGTQRSQGWMSSGTSPNPRADA 308
              SG    +++D+        + S SS+ID         T+ SQ    SG+S       
Sbjct: 308 ---SGLYSPVSEDSTVPQFEAPSPSHSSIID--------STEYSQPPGFSGSSQT----- 367

Query: 309 KIQLGSQGPLRKDAYCSSDLHSVAQSGLAVANKRRVHTQFNELQDCYLQKRRNWRKQLYK 368
                     +K  + +S L S          ++R+   F +L+ CY   R +       
Sbjct: 368 ----------KKQPWYNSTLAS---------RRKRLTAHFEDLEQCYFSTRMS------- 427

Query: 369 QEDRDIKFSSGESYNPALEDFQSVLTSFMRYSRLRVIAELRH-GDLFHSANIVSSIEFDR 428
                 + S        L++FQ  L+ F RY+ +R +A L +  DL++ ++IVSSIEFDR
Sbjct: 428 ------RISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDR 487

Query: 429 DDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDY 488
           D ++FA AGV++ IKV+E+ +V+ +  D+H+P  EM+  SK+SC+SW+ Y K+ +ASSDY
Sbjct: 488 DCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDY 547

Query: 489 EGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFN 548
           EG V +WD  T Q    Y+EHEKR WSVDF+  +P +L SGSDD KVK+W T  + SV +
Sbjct: 548 EGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVAS 607

Query: 549 IDMKANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN 608
           I+ KANVC VK++P S  ++A G ADH +HYYDLRN  QP+ VF GH+KAVSY KF+S  
Sbjct: 608 IEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGE 667

Query: 609 ELASASTDSTLRLWDV-------------------------------KEN------LPAI 663
           E+ SASTDS L+LW+V                                EN         +
Sbjct: 668 EIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGL 727

[Close]
BLAST of Lsi02G010800 vs. ExPASy Swiss-Prot
Match: Q94BM7 (Protein SPA1-RELATED 4 OS=Arabidopsis thaliana OX=3702 GN=SPA4 PE=1 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.8e-72
Identity = 174/533 (32.65%), Postives = 281/533 (52.72%), Query Frame = 0 

Query: 173 LAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELY 232
           L E++  ME  +     ++LL FL+ ++++K E  +++Q  +  +  DI  V K++L L 
Sbjct: 275 LEEREAAMELRDRIEEQELLLEFLFLIQQRKQEAADKLQDTISLLSSDIDQVVKRQLVL- 334

Query: 233 RSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINCGTQRSQGWMSSGTSPNPRADAKIQ 292
             +++       LA      +   +   +  N  N   + S+      T  +   ++   
Sbjct: 335 --QQKGRDVRSFLASRKRIRQGAETTAAEEENDDNSIDEESK---LDDTLESTLLESSRL 394

Query: 293 LGSQGPLRKDAYCSSDLHSVAQSGLAVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQED 352
           + +   L    + +       Q   A A ++ +   ++ L        ++   Q  K   
Sbjct: 395 MRNLKKLESVYFAT----RYRQIKAATAAEKPLARYYSALSCNGRSSEKSSMSQPSKDPI 454

Query: 353 RDIKFSSGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEF 412
            D +   G   +P LE     L  ++ +S+LRV A+L+ GDL +S+N+V +I FDRD EF
Sbjct: 455 NDSR--QGGWIDPFLEG----LCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEF 514

Query: 413 FATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIV 472
           FATAGV++ IK+FE  S++ +  D+H+PVVE+++RSKLS + WN Y KS +ASS++EG+V
Sbjct: 515 FATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVV 574

Query: 473 TVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMK 532
            VWDV   Q V E +EHEKR WS+D+S ++P++L SGSDD  VK+W   Q  S+  I  K
Sbjct: 575 QVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK 634

Query: 533 ANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELAS 592
           AN+C V++   +   +A GSADH ++YYDLRN   PL    GH K VSYV+F+ ++ L S
Sbjct: 635 ANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFVDSSTLVS 694

Query: 593 ASTDSTLRLWDVKENLPAISK--------------------------------------- 652
           +STD+TL+LWD+  ++  I++                                       
Sbjct: 695 SSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHK 754

Query: 653 ----PMAWHRFSS--DLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVL 661
               P+  ++F +   + + + D  S FIS+VCW+  S T++ ANS G IK+L
Sbjct: 755 AFPMPVLSYKFKTIDPVSELEVDDASQFISSVCWRGQSSTLVAANSTGNIKIL 791

[Close]
BLAST of Lsi02G010800 vs. ExPASy TrEMBL
Match: A0A0A0LYH0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699620 PE=4 SV=1)

HSP 1 Score: 1218.8 bits (3152), Expect = 0.0e+00
Identity = 632/711 (88.89%), Postives = 637/711 (89.59%), Query Frame = 0 

Query: 1   MGGGSTSIGALVPTVKPEPSTVDSTASPTPPPLPPTTPPPPPPPPSDLMPAQFEPGDTNA 60
           MGGG  SIGALVPTVK EPST+DST S +PPP PP  PPPPPPPPSDLMP QF+P   NA
Sbjct: 1   MGGG--SIGALVPTVKTEPSTLDSTPSSSPPPPPPLPPPPPPPPPSDLMPPQFQPDAANA 60

Query: 61  A----------TASQPNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSD 120
           A            S  NTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSD
Sbjct: 61  AAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSD 120

Query: 121 CPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTTSPFGYLHQALQKGCDMSIKDLEELL 180
           CPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKT SPFGYL QALQKGCDMSIKDLEELL
Sbjct: 121 CPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGYLQQALQKGCDMSIKDLEELL 180

Query: 181 TLLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLE 240
           TLL EKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLE
Sbjct: 181 TLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLE 240

Query: 241 LYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINCGTQRSQGWMSSGTSPNPRADAK 300
           LYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGIN G QRSQGWMSSG SPNPRADAK
Sbjct: 241 LYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSGNSPNPRADAK 300

Query: 301 IQLGSQGPLRKDAYCSSDLHSVAQSGLAVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQ 360
           IQL SQGPLRKDAYCSSDLHSVAQSGL VANKRRVHTQFNELQDCYLQKRRNWRKQLYKQ
Sbjct: 301 IQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQ 360

Query: 361 EDRDIKFSSGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDD 420
           EDRDIKFS GESYNP+LEDFQSVLTSFMRYSRLRVIAEL HGDLFHS NIVSSIEFDRDD
Sbjct: 361 EDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNIVSSIEFDRDD 420

Query: 421 EFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEG 480
           EFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEM+TRSKLSCLSWNKYTKSHIASSDYEG
Sbjct: 421 EFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMATRSKLSCLSWNKYTKSHIASSDYEG 480

Query: 481 IVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNID 540
           IVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNID
Sbjct: 481 IVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNID 540

Query: 541 MKANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNEL 600
           MKANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNEL
Sbjct: 541 MKANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNEL 600

Query: 601 ASASTDSTLRLWDVKENLP-------------------------------------AISK 660
           ASASTDSTLRLWDVKENLP                                     AISK
Sbjct: 601 ASASTDSTLRLWDVKENLPICVYRGHTNEKNFVGLTVNSEYIACGSETNEVFIYHKAISK 660

Query: 661 PMAWHRFSSDLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 665
           PMAWHRFSSDLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP
Sbjct: 661 PMAWHRFSSDLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 709

[Close]
BLAST of Lsi02G010800 vs. ExPASy TrEMBL
Match: A0A5A7TIH5 (E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold110G00010 PE=4 SV=1)

HSP 1 Score: 1216.8 bits (3147), Expect = 0.0e+00
Identity = 633/709 (89.28%), Postives = 640/709 (90.27%), Query Frame = 0 

Query: 1   MGGGSTSIGALVPTVKPEPSTVDSTASPTPPPLPPTTPPPPPPPPSDLMPAQFEPGDTNA 60
           MGGG  S+GALVPTVK EPST+DST S +PPP PP  P PPPPPPSDLMP QF P D NA
Sbjct: 1   MGGG--SVGALVPTVKTEPSTLDSTPSSSPPPPPPLPPSPPPPPPSDLMP-QFLPEDANA 60

Query: 61  --------ATASQPNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCP 120
                   A AS  +TDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCP
Sbjct: 61  AAATPTPTAAASHSDTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCP 120

Query: 121 CCAHFLRSNSIFPNILLDKLLKKTSARQIKKTTSPFGYLHQALQKGCDMSIKDLEELLTL 180
           CCAHFLRS SIFPNILLDKLLKKTSARQIKKTTSPFGYL QALQKGCDM+IKDLEELLTL
Sbjct: 121 CCAHFLRSTSIFPNILLDKLLKKTSARQIKKTTSPFGYLQQALQKGCDMTIKDLEELLTL 180

Query: 181 LAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELY 240
           LAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLEL+
Sbjct: 181 LAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELH 240

Query: 241 RSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINCGTQRSQGWMSSGTSPNPRADAKIQ 300
           RSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGIN G QRSQGWMSSG SPNPRADAKIQ
Sbjct: 241 RSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQ 300

Query: 301 LGSQGPLRKDAYCSSDLHSVAQSGLAVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQED 360
           L SQGPLRKDAYCSSDLHS+AQSGL VANKRRVHTQFNELQDCYLQKRRNWRKQLYKQED
Sbjct: 301 LSSQGPLRKDAYCSSDLHSIAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQED 360

Query: 361 RDIKFSSGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEF 420
           RDIKFS GESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEF
Sbjct: 361 RDIKFSGGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEF 420

Query: 421 FATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIV 480
           FATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIV
Sbjct: 421 FATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIV 480

Query: 481 TVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMK 540
           TVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMK
Sbjct: 481 TVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMK 540

Query: 541 ANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELAS 600
           ANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELAS
Sbjct: 541 ANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELAS 600

Query: 601 ASTDSTLRLWDVKENLP-------------------------------------AISKPM 660
           ASTDSTLRLWDVKENLP                                     AISKPM
Sbjct: 601 ASTDSTLRLWDVKENLPLCVYRGHTNEKNFVGLTVNSEYIACGSETNEVFIYHKAISKPM 660

Query: 661 AWHRFSSDLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 665
           AWHRFSSDLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP
Sbjct: 661 AWHRFSSDLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 706

[Close]
BLAST of Lsi02G010800 vs. ExPASy TrEMBL
Match: A0A1S3C954 (E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo OX=3656 GN=LOC103498239 PE=4 SV=1)

HSP 1 Score: 1216.8 bits (3147), Expect = 0.0e+00
Identity = 633/709 (89.28%), Postives = 640/709 (90.27%), Query Frame = 0 

Query: 1   MGGGSTSIGALVPTVKPEPSTVDSTASPTPPPLPPTTPPPPPPPPSDLMPAQFEPGDTNA 60
           MGGG  S+GALVPTVK EPST+DST S +PPP PP  P PPPPPPSDLMP QF P D NA
Sbjct: 1   MGGG--SVGALVPTVKTEPSTLDSTPSSSPPPPPPLPPSPPPPPPSDLMP-QFLPEDANA 60

Query: 61  --------ATASQPNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCP 120
                   A AS  +TDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCP
Sbjct: 61  AAATPTPTAAASHSDTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCP 120

Query: 121 CCAHFLRSNSIFPNILLDKLLKKTSARQIKKTTSPFGYLHQALQKGCDMSIKDLEELLTL 180
           CCAHFLRS SIFPNILLDKLLKKTSARQIKKTTSPFGYL QALQKGCDM+IKDLEELLTL
Sbjct: 121 CCAHFLRSTSIFPNILLDKLLKKTSARQIKKTTSPFGYLQQALQKGCDMTIKDLEELLTL 180

Query: 181 LAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELY 240
           LAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLEL+
Sbjct: 181 LAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELH 240

Query: 241 RSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINCGTQRSQGWMSSGTSPNPRADAKIQ 300
           RSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGIN G QRSQGWMSSG SPNPRADAKIQ
Sbjct: 241 RSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQ 300

Query: 301 LGSQGPLRKDAYCSSDLHSVAQSGLAVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQED 360
           L SQGPLRKDAYCSSDLHS+AQSGL VANKRRVHTQFNELQDCYLQKRRNWRKQLYKQED
Sbjct: 301 LSSQGPLRKDAYCSSDLHSIAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQED 360

Query: 361 RDIKFSSGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEF 420
           RDIKFS GESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEF
Sbjct: 361 RDIKFSGGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEF 420

Query: 421 FATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIV 480
           FATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIV
Sbjct: 421 FATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIV 480

Query: 481 TVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMK 540
           TVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMK
Sbjct: 481 TVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMK 540

Query: 541 ANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELAS 600
           ANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELAS
Sbjct: 541 ANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELAS 600

Query: 601 ASTDSTLRLWDVKENLP-------------------------------------AISKPM 660
           ASTDSTLRLWDVKENLP                                     AISKPM
Sbjct: 601 ASTDSTLRLWDVKENLPLCVYRGHTNEKNFVGLTVNSEYIACGSETNEVFIYHKAISKPM 660

Query: 661 AWHRFSSDLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 665
           AWHRFSSDLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP
Sbjct: 661 AWHRFSSDLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 706

[Close]
BLAST of Lsi02G010800 vs. ExPASy TrEMBL
Match: A0A5D3CLL8 (E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00900 PE=4 SV=1)

HSP 1 Score: 1201.0 bits (3106), Expect = 0.0e+00
Identity = 633/739 (85.66%), Postives = 640/739 (86.60%), Query Frame = 0 

Query: 1   MGGGSTSIGALVPTVKPEPSTVDSTASPTPPPLPPTTPPPPPPPPSDLMPAQFEPGDTNA 60
           MGGG  S+GALVPTVK EPST+DST S +PPP PP  P PPPPPPSDLMP QF P D NA
Sbjct: 1   MGGG--SVGALVPTVKTEPSTLDSTPSSSPPPPPPLPPSPPPPPPSDLMP-QFLPEDANA 60

Query: 61  --------ATASQPNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCP 120
                   A AS  +TDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCP
Sbjct: 61  AAATPTPTAAASHSDTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCP 120

Query: 121 CCAHFLRSNSIFPNILLD------------------------------KLLKKTSARQIK 180
           CCAHFLRS SIFPNILLD                              KLLKKTSARQIK
Sbjct: 121 CCAHFLRSTSIFPNILLDKITNRMQCSFKAQGAIKRNCLLGLKRKMQKKLLKKTSARQIK 180

Query: 181 KTTSPFGYLHQALQKGCDMSIKDLEELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQ 240
           KTTSPFGYL QALQKGCDM+IKDLEELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQ
Sbjct: 181 KTTSPFGYLQQALQKGCDMTIKDLEELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQ 240

Query: 241 KLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKH 300
           KLEELNEIQADLHYIKEDISSVEKQRLEL+RSKERYSGKMKMLADDTVSTKSRSSLIDKH
Sbjct: 241 KLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYSGKMKMLADDTVSTKSRSSLIDKH 300

Query: 301 GNGINCGTQRSQGWMSSGTSPNPRADAKIQLGSQGPLRKDAYCSSDLHSVAQSGLAVANK 360
           GNGIN G QRSQGWMSSG SPNPRADAKIQL SQGPLRKDAYCSSDLHS+AQSGL VANK
Sbjct: 301 GNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSIAQSGLTVANK 360

Query: 361 RRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSSGESYNPALEDFQSVLTSFMRYSR 420
           RRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFS GESYNPALEDFQSVLTSFMRYSR
Sbjct: 361 RRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNPALEDFQSVLTSFMRYSR 420

Query: 421 LRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVV 480
           LRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVV
Sbjct: 421 LRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVV 480

Query: 481 EMSTRSKLSCLSWNKYTKSHIASSDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSE 540
           EMSTRSKLSCLSWNKYTKSHIASSDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSE
Sbjct: 481 EMSTRSKLSCLSWNKYTKSHIASSDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSE 540

Query: 541 PSMLVSGSDDCKVKIWCTRQEASVFNIDMKANVCSVKYNPGSSLYVAVGSADHNIHYYDL 600
           PSMLVSGSDDCKVKIWCTRQEASVFNIDMKANVCSVKYNPGSSLYVAVGSADHNIHYYDL
Sbjct: 541 PSMLVSGSDDCKVKIWCTRQEASVFNIDMKANVCSVKYNPGSSLYVAVGSADHNIHYYDL 600

Query: 601 RNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTLRLWDVKENLP------------- 660
           RNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTLRLWDVKENLP             
Sbjct: 601 RNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTLRLWDVKENLPLCVYRGHTNEKNF 660

Query: 661 ------------------------AISKPMAWHRFSSDLEDNDEDAGSYFISAVCWKSDS 665
                                   AISKPMAWHRFSSDLEDNDEDAGSYFISAVCWKSDS
Sbjct: 661 VGLTVNSEYIACGSETNEVFIYHKAISKPMAWHRFSSDLEDNDEDAGSYFISAVCWKSDS 720

[Close]
BLAST of Lsi02G010800 vs. ExPASy TrEMBL
Match: A0A6J1CL47 (E3 ubiquitin-protein ligase COP1-like OS=Momordica charantia OX=3673 GN=LOC111012608 PE=4 SV=1)

HSP 1 Score: 1195.3 bits (3091), Expect = 0.0e+00
Identity = 620/702 (88.32%), Postives = 633/702 (90.17%), Query Frame = 0 

Query: 1   MGGGSTSIGALVPTVKPEPSTVDSTASPTPPPLPPTTPPPPPPPPSDLMPAQFEPGDTNA 60
           MGGG  S+  LVPTVK EPS  DSTA   PPP PP  PPPPPPPP + M A+ E G+ N 
Sbjct: 1   MGGG--SMAPLVPTVKTEPSAADSTA---PPPPPPPLPPPPPPPP-EAMAAELEAGELN- 60

Query: 61  ATASQPNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCAHFLRS 120
           ATAS+ N++DLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCC HFLRS
Sbjct: 61  ATASEANSEDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCGHFLRS 120

Query: 121 NSIFPNILLDKLLKKTSARQIKKTTSPFGYLHQALQKGCDMSIKDLEELLTLLAEKKRKM 180
           NSIFPNILLDKLLKKTSARQIKKTTSPFGYLHQALQKGCDMSIK+LEEL+TLLAEKKRKM
Sbjct: 121 NSIFPNILLDKLLKKTSARQIKKTTSPFGYLHQALQKGCDMSIKELEELVTLLAEKKRKM 180

Query: 181 EQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYSG 240
           EQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYSG
Sbjct: 181 EQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYSG 240

Query: 241 KMKMLADDTVSTKSRSSLIDKHGNGINCGTQRSQGWMSSGTSPNPRADAKIQLGSQGPLR 300
           KMKML DDTVSTKSRSSLIDKHGNGINCGTQRSQGWMSSG S NPRAD KIQLGSQGPLR
Sbjct: 241 KMKMLVDDTVSTKSRSSLIDKHGNGINCGTQRSQGWMSSGNSANPRADVKIQLGSQGPLR 300

Query: 301 KDAYCSSDLHSVAQSGLAVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSSG 360
           KDAYC SDLHSVAQSGLAVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRD KF+SG
Sbjct: 301 KDAYCGSDLHSVAQSGLAVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDTKFNSG 360

Query: 361 ESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSR 420
           ESYNPAL+DFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSR
Sbjct: 361 ESYNPALDDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSR 420

Query: 421 CIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIVTVWDVNTR 480
           CIKVFEFSSVVNEP DVHFP VEMSTRSKLSCLSWNKYTKSHIASSDYEGIVTVWDVNTR
Sbjct: 421 CIKVFEFSSVVNEPTDVHFPAVEMSTRSKLSCLSWNKYTKSHIASSDYEGIVTVWDVNTR 480

Query: 481 QSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMKANVCSVKY 540
           QSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQE S+FNIDMKANVCSVKY
Sbjct: 481 QSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQENSLFNIDMKANVCSVKY 540

Query: 541 NPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTLR 600
           NPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTLR
Sbjct: 541 NPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTLR 600

Query: 601 LWDVKENLP-------------------------------------AISKPMAWHRF-SS 660
           LWDVKEN+P                                     AISKPMAWHRF SS
Sbjct: 601 LWDVKENMPLCVYRGHTNEKNFVGLTVNSEYIACGSETNEVFIYHKAISKPMAWHRFSSS 660

Query: 661 DLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 665
           DLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP
Sbjct: 661 DLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 695

[Close]
BLAST of Lsi02G010800 vs. NCBI nr
Match: XP_038894733.1 (E3 ubiquitin-protein ligase COP1-like [Benincasa hispida])

HSP 1 Score: 1246.5 bits (3224), Expect = 0.0e+00
Identity = 645/703 (91.75%), Postives = 649/703 (92.32%), Query Frame = 0 

Query: 1   MGGGSTSIGALVPTVKPEPSTVDSTASPTP-PPLPPTTPPPPPPPPSDLMPAQFEPGDTN 60
           MGGG  SIGALVPTVKPEPST+DSTASPTP PP PP  PPPPPPPPSDLMP QFEPGD N
Sbjct: 1   MGGG--SIGALVPTVKPEPSTLDSTASPTPTPPPPPPPPPPPPPPPSDLMPPQFEPGDAN 60

Query: 61  AAT-ASQPNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCAHFL 120
           AA  ASQ NTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCAHFL
Sbjct: 61  AAAPASQSNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCAHFL 120

Query: 121 RSNSIFPNILLDKLLKKTSARQIKKTTSPFGYLHQALQKGCDMSIKDLEELLTLLAEKKR 180
           RSNSIFPNILLDKLLKKTSARQIKK+TS FGYLHQALQKGCDMSIKDLEELLTLLAEKKR
Sbjct: 121 RSNSIFPNILLDKLLKKTSARQIKKSTSQFGYLHQALQKGCDMSIKDLEELLTLLAEKKR 180

Query: 181 KMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERY 240
           KMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERY
Sbjct: 181 KMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERY 240

Query: 241 SGKMKMLADDTVSTKSRSSLIDKHGNGINCGTQRSQGWMSSGTSPNPRADAKIQLGSQGP 300
           SGKMKMLADDT+STKSRSSLIDKHGNGIN G QRSQGW+SSG SPNPRADAKIQL SQGP
Sbjct: 241 SGKMKMLADDTISTKSRSSLIDKHGNGINSGAQRSQGWVSSGNSPNPRADAKIQLSSQGP 300

Query: 301 LRKDAYCSSDLHSVAQSGLAVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFS 360
           LRKDAYCSSDLHSVAQSGL VANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFS
Sbjct: 301 LRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFS 360

Query: 361 SGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGV 420
           SGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGV
Sbjct: 361 SGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGV 420

Query: 421 SRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIVTVWDVN 480
           SRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIVTVWDVN
Sbjct: 421 SRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIVTVWDVN 480

Query: 481 TRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMKANVCSV 540
           TRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMKANVCSV
Sbjct: 481 TRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMKANVCSV 540

Query: 541 KYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDST 600
           KYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDST
Sbjct: 541 KYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDST 600

Query: 601 LRLWDVKENLP-------------------------------------AISKPMAWHRFS 660
           LRLWDVKENLP                                     AISKPMAWHRFS
Sbjct: 601 LRLWDVKENLPLCVYRGHTNEKNFVGLTVNSEYIACGSETNEVFIYHKAISKPMAWHRFS 660

Query: 661 SDLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 665
           SDLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP
Sbjct: 661 SDLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 701

[Close]
BLAST of Lsi02G010800 vs. NCBI nr
Match: XP_008458987.1 (PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis melo] >KAA0043144.1 E3 ubiquitin-protein ligase COP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 1216.8 bits (3147), Expect = 0.0e+00
Identity = 633/709 (89.28%), Postives = 640/709 (90.27%), Query Frame = 0 

Query: 1   MGGGSTSIGALVPTVKPEPSTVDSTASPTPPPLPPTTPPPPPPPPSDLMPAQFEPGDTNA 60
           MGGG  S+GALVPTVK EPST+DST S +PPP PP  P PPPPPPSDLMP QF P D NA
Sbjct: 1   MGGG--SVGALVPTVKTEPSTLDSTPSSSPPPPPPLPPSPPPPPPSDLMP-QFLPEDANA 60

Query: 61  --------ATASQPNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCP 120
                   A AS  +TDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCP
Sbjct: 61  AAATPTPTAAASHSDTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCP 120

Query: 121 CCAHFLRSNSIFPNILLDKLLKKTSARQIKKTTSPFGYLHQALQKGCDMSIKDLEELLTL 180
           CCAHFLRS SIFPNILLDKLLKKTSARQIKKTTSPFGYL QALQKGCDM+IKDLEELLTL
Sbjct: 121 CCAHFLRSTSIFPNILLDKLLKKTSARQIKKTTSPFGYLQQALQKGCDMTIKDLEELLTL 180

Query: 181 LAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELY 240
           LAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLEL+
Sbjct: 181 LAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELH 240

Query: 241 RSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINCGTQRSQGWMSSGTSPNPRADAKIQ 300
           RSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGIN G QRSQGWMSSG SPNPRADAKIQ
Sbjct: 241 RSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQ 300

Query: 301 LGSQGPLRKDAYCSSDLHSVAQSGLAVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQED 360
           L SQGPLRKDAYCSSDLHS+AQSGL VANKRRVHTQFNELQDCYLQKRRNWRKQLYKQED
Sbjct: 301 LSSQGPLRKDAYCSSDLHSIAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQED 360

Query: 361 RDIKFSSGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEF 420
           RDIKFS GESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEF
Sbjct: 361 RDIKFSGGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEF 420

Query: 421 FATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIV 480
           FATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIV
Sbjct: 421 FATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIV 480

Query: 481 TVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMK 540
           TVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMK
Sbjct: 481 TVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMK 540

Query: 541 ANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELAS 600
           ANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELAS
Sbjct: 541 ANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELAS 600

Query: 601 ASTDSTLRLWDVKENLP-------------------------------------AISKPM 660
           ASTDSTLRLWDVKENLP                                     AISKPM
Sbjct: 601 ASTDSTLRLWDVKENLPLCVYRGHTNEKNFVGLTVNSEYIACGSETNEVFIYHKAISKPM 660

Query: 661 AWHRFSSDLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 665
           AWHRFSSDLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP
Sbjct: 661 AWHRFSSDLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 706

[Close]
BLAST of Lsi02G010800 vs. NCBI nr
Match: TYK12320.1 (E3 ubiquitin-protein ligase COP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 1201.0 bits (3106), Expect = 0.0e+00
Identity = 633/739 (85.66%), Postives = 640/739 (86.60%), Query Frame = 0 

Query: 1   MGGGSTSIGALVPTVKPEPSTVDSTASPTPPPLPPTTPPPPPPPPSDLMPAQFEPGDTNA 60
           MGGG  S+GALVPTVK EPST+DST S +PPP PP  P PPPPPPSDLMP QF P D NA
Sbjct: 1   MGGG--SVGALVPTVKTEPSTLDSTPSSSPPPPPPLPPSPPPPPPSDLMP-QFLPEDANA 60

Query: 61  --------ATASQPNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCP 120
                   A AS  +TDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCP
Sbjct: 61  AAATPTPTAAASHSDTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCP 120

Query: 121 CCAHFLRSNSIFPNILLD------------------------------KLLKKTSARQIK 180
           CCAHFLRS SIFPNILLD                              KLLKKTSARQIK
Sbjct: 121 CCAHFLRSTSIFPNILLDKITNRMQCSFKAQGAIKRNCLLGLKRKMQKKLLKKTSARQIK 180

Query: 181 KTTSPFGYLHQALQKGCDMSIKDLEELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQ 240
           KTTSPFGYL QALQKGCDM+IKDLEELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQ
Sbjct: 181 KTTSPFGYLQQALQKGCDMTIKDLEELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQ 240

Query: 241 KLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKH 300
           KLEELNEIQADLHYIKEDISSVEKQRLEL+RSKERYSGKMKMLADDTVSTKSRSSLIDKH
Sbjct: 241 KLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYSGKMKMLADDTVSTKSRSSLIDKH 300

Query: 301 GNGINCGTQRSQGWMSSGTSPNPRADAKIQLGSQGPLRKDAYCSSDLHSVAQSGLAVANK 360
           GNGIN G QRSQGWMSSG SPNPRADAKIQL SQGPLRKDAYCSSDLHS+AQSGL VANK
Sbjct: 301 GNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSIAQSGLTVANK 360

Query: 361 RRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSSGESYNPALEDFQSVLTSFMRYSR 420
           RRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFS GESYNPALEDFQSVLTSFMRYSR
Sbjct: 361 RRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNPALEDFQSVLTSFMRYSR 420

Query: 421 LRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVV 480
           LRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVV
Sbjct: 421 LRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVV 480

Query: 481 EMSTRSKLSCLSWNKYTKSHIASSDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSE 540
           EMSTRSKLSCLSWNKYTKSHIASSDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSE
Sbjct: 481 EMSTRSKLSCLSWNKYTKSHIASSDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSE 540

Query: 541 PSMLVSGSDDCKVKIWCTRQEASVFNIDMKANVCSVKYNPGSSLYVAVGSADHNIHYYDL 600
           PSMLVSGSDDCKVKIWCTRQEASVFNIDMKANVCSVKYNPGSSLYVAVGSADHNIHYYDL
Sbjct: 541 PSMLVSGSDDCKVKIWCTRQEASVFNIDMKANVCSVKYNPGSSLYVAVGSADHNIHYYDL 600

Query: 601 RNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTLRLWDVKENLP------------- 660
           RNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTLRLWDVKENLP             
Sbjct: 601 RNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTLRLWDVKENLPLCVYRGHTNEKNF 660

Query: 661 ------------------------AISKPMAWHRFSSDLEDNDEDAGSYFISAVCWKSDS 665
                                   AISKPMAWHRFSSDLEDNDEDAGSYFISAVCWKSDS
Sbjct: 661 VGLTVNSEYIACGSETNEVFIYHKAISKPMAWHRFSSDLEDNDEDAGSYFISAVCWKSDS 720

[Close]
BLAST of Lsi02G010800 vs. NCBI nr
Match: XP_022142505.1 (E3 ubiquitin-protein ligase COP1-like [Momordica charantia])

HSP 1 Score: 1195.3 bits (3091), Expect = 0.0e+00
Identity = 620/702 (88.32%), Postives = 633/702 (90.17%), Query Frame = 0 

Query: 1   MGGGSTSIGALVPTVKPEPSTVDSTASPTPPPLPPTTPPPPPPPPSDLMPAQFEPGDTNA 60
           MGGG  S+  LVPTVK EPS  DSTA   PPP PP  PPPPPPPP + M A+ E G+ N 
Sbjct: 1   MGGG--SMAPLVPTVKTEPSAADSTA---PPPPPPPLPPPPPPPP-EAMAAELEAGELN- 60

Query: 61  ATASQPNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCAHFLRS 120
           ATAS+ N++DLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCC HFLRS
Sbjct: 61  ATASEANSEDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCGHFLRS 120

Query: 121 NSIFPNILLDKLLKKTSARQIKKTTSPFGYLHQALQKGCDMSIKDLEELLTLLAEKKRKM 180
           NSIFPNILLDKLLKKTSARQIKKTTSPFGYLHQALQKGCDMSIK+LEEL+TLLAEKKRKM
Sbjct: 121 NSIFPNILLDKLLKKTSARQIKKTTSPFGYLHQALQKGCDMSIKELEELVTLLAEKKRKM 180

Query: 181 EQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYSG 240
           EQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYSG
Sbjct: 181 EQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYSG 240

Query: 241 KMKMLADDTVSTKSRSSLIDKHGNGINCGTQRSQGWMSSGTSPNPRADAKIQLGSQGPLR 300
           KMKML DDTVSTKSRSSLIDKHGNGINCGTQRSQGWMSSG S NPRAD KIQLGSQGPLR
Sbjct: 241 KMKMLVDDTVSTKSRSSLIDKHGNGINCGTQRSQGWMSSGNSANPRADVKIQLGSQGPLR 300

Query: 301 KDAYCSSDLHSVAQSGLAVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSSG 360
           KDAYC SDLHSVAQSGLAVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRD KF+SG
Sbjct: 301 KDAYCGSDLHSVAQSGLAVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDTKFNSG 360

Query: 361 ESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSR 420
           ESYNPAL+DFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSR
Sbjct: 361 ESYNPALDDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSR 420

Query: 421 CIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIVTVWDVNTR 480
           CIKVFEFSSVVNEP DVHFP VEMSTRSKLSCLSWNKYTKSHIASSDYEGIVTVWDVNTR
Sbjct: 421 CIKVFEFSSVVNEPTDVHFPAVEMSTRSKLSCLSWNKYTKSHIASSDYEGIVTVWDVNTR 480

Query: 481 QSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMKANVCSVKY 540
           QSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQE S+FNIDMKANVCSVKY
Sbjct: 481 QSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQENSLFNIDMKANVCSVKY 540

Query: 541 NPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTLR 600
           NPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTLR
Sbjct: 541 NPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTLR 600

Query: 601 LWDVKENLP-------------------------------------AISKPMAWHRF-SS 660
           LWDVKEN+P                                     AISKPMAWHRF SS
Sbjct: 601 LWDVKENMPLCVYRGHTNEKNFVGLTVNSEYIACGSETNEVFIYHKAISKPMAWHRFSSS 660

Query: 661 DLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 665
           DLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP
Sbjct: 661 DLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 695

[Close]
BLAST of Lsi02G010800 vs. NCBI nr
Match: XP_023523813.1 (E3 ubiquitin-protein ligase COP1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1173.3 bits (3034), Expect = 0.0e+00
Identity = 611/710 (86.06%), Postives = 631/710 (88.87%), Query Frame = 0 

Query: 1   MGGGSTSIGALVPTVKPEPSTVDSTASPTPPPLPPTTPPPP-PPPPSD--------LMPA 60
           MGGG  SIGALVPTVKP+PS +DSTASP P PLPP  PPPP PPPPS         +M A
Sbjct: 1   MGGG--SIGALVPTVKPDPSALDSTASPAPQPLPPPPPPPPSPPPPSSPPPPPLPLVMAA 60

Query: 61  QFEPGDTNAATASQPNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDC 120
           QF+ G+   A+AS  N +DLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDC
Sbjct: 61  QFDAGEAK-ASASDVNAEDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDC 120

Query: 121 PCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTTSPFGYLHQALQKGCDMSIKDLEELLT 180
           PCC++F+RSNSIFPNILLDK LKKT+ARQIKKTTSPF YLH ALQKGCDMSIKDL+ELLT
Sbjct: 121 PCCSNFIRSNSIFPNILLDKFLKKTAARQIKKTTSPFEYLHHALQKGCDMSIKDLDELLT 180

Query: 181 LLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLEL 240
           LLAEKKRKMEQEEAETNMQILLGFLY LRKQKLEELNEIQADLHYIKEDISSVEKQRLEL
Sbjct: 181 LLAEKKRKMEQEEAETNMQILLGFLYYLRKQKLEELNEIQADLHYIKEDISSVEKQRLEL 240

Query: 241 YRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINCGTQRSQGWMSSGTSPNPRADAKI 300
           YRSKERYSGKMKML DDTVSTKSRSSLIDK+GNG NCG QRSQGWMSSG SPN RADAK 
Sbjct: 241 YRSKERYSGKMKMLVDDTVSTKSRSSLIDKNGNGANCGAQRSQGWMSSGNSPNARADAKT 300

Query: 301 QLGSQGPLRKDAYCSSDLHSVAQSGLAVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQE 360
            +GSQGPLRKDA+CSSDLHSVAQSGL VANKRRVHTQFNELQD YLQKRRNWRKQL KQE
Sbjct: 301 HIGSQGPLRKDAHCSSDLHSVAQSGLGVANKRRVHTQFNELQDYYLQKRRNWRKQLVKQE 360

Query: 361 DRDIKFSSGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDE 420
           D+D+K SSGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDE
Sbjct: 361 DKDVKLSSGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDE 420

Query: 421 FFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGI 480
           FFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGI
Sbjct: 421 FFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGI 480

Query: 481 VTVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDM 540
           VTVWDVNTRQSVMEYEEHEKRAWSVDFSRSEP+MLVSGSDDCKVKIWCTRQEASVFNID+
Sbjct: 481 VTVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPTMLVSGSDDCKVKIWCTRQEASVFNIDL 540

Query: 541 KANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELA 600
           KANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELA
Sbjct: 541 KANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELA 600

Query: 601 SASTDSTLRLWDVKENLP-------------------------------------AISKP 660
           SASTDSTLRLWDVKE +P                                     AISKP
Sbjct: 601 SASTDSTLRLWDVKEYMPLCVYRGHTNEKNFVGLTVNSEYIACGSETNEVFIYHKAISKP 660

Query: 661 MAWHRFSSDLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 665
           MAWHRFSSDLEDNDEDA SYFISAVCWKSDSPTILTANSQGTIKVLVLAP
Sbjct: 661 MAWHRFSSDLEDNDEDASSYFISAVCWKSDSPTILTANSQGTIKVLVLAP 707

[Close]
BLAST of Lsi02G010800 vs. TAIR 10
Match: AT2G32950.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 828.2 bits (2138), Expect = 4.8e-240
Identity = 433/673 (64.34%), Postives = 510/673 (75.78%), Query Frame = 0 

Query: 29  TPPPLPPTTPPPPPPPPSDLMPAQFEPGDTNAATASQPNTDDLDKDMLCPICMQIIKDAF 88
           T P +P   P P      +   A     D   +  S+    DLDKD+LCPICMQIIKDAF
Sbjct: 6   TDPVVPAVKPDPRTSSVGE--GANRHENDDGGSGGSEIGAPDLDKDLLCPICMQIIKDAF 65

Query: 89  LTTCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTTSPF 148
           LT CGHSFCYMCI+THLRNKSDCPCC+  L +N ++PN LLDKLLKKTSAR + KT SP 
Sbjct: 66  LTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLDKLLKKTSARHVSKTASPL 125

Query: 149 GYLHQALQKGCDMSIKDLEELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELN 208
               +ALQ+GCD+SIK+++ LLTLLAE+KRKMEQEEAE NMQILL FL+CLRKQK++ELN
Sbjct: 126 DQFREALQRGCDVSIKEVDNLLTLLAERKRKMEQEEAERNMQILLDFLHCLRKQKVDELN 185

Query: 209 EIQADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINC 268
           E+Q DL YIKEDI++VE+ R++LYR+++RYS K++ML DD  +  +     +K+  G N 
Sbjct: 186 EVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPSTRNAWPH--EKNQIGFNS 245

Query: 269 GTQRSQGWMSSGTSPNPRADAKIQLGSQGPLRKDAYCSSDLHSVAQSGLAVANKRRVHTQ 328
            +   +G    G   N + + K Q  S G  +KDA   SD  S+ QS +++A K+R+H Q
Sbjct: 246 NSLSIRGGNFVGNYQNKKVEGKAQGSSHGLPKKDALSGSDSQSLNQSTVSMARKKRIHAQ 305

Query: 329 FNELQDCYLQKRRNWRKQLYKQEDRDIKFSSGESYNPALEDFQSVLTSFMRYSRLRVIAE 388
           FN+LQ+CYLQKRR    Q   +++ D      E Y+  L DFQSVLT+F RYSRLRVIAE
Sbjct: 306 FNDLQECYLQKRRQLADQPNSKQENDKSVVRREGYSNGLADFQSVLTTFTRYSRLRVIAE 365

Query: 389 LRHGDLFHSANIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRS 448
           +RHGD+FHSANIVSSIEFDRDDE FATAGVSRCIKVF+FSSVVNEPAD+  P+VEMSTRS
Sbjct: 366 IRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMSTRS 425

Query: 449 KLSCLSWNKYTKSHIASSDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVS 508
           KLSCLSWNK+ K+HIASSDYEGIVTVWDV TRQS+MEYEEHEKRAWSVDFSR+EPSMLVS
Sbjct: 426 KLSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVS 485

Query: 509 GSDDCKVKIWCTRQEASVFNIDMKANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQP 568
           GSDDCKVK+WCTRQEASV NIDMKAN+C VKYNPGSS Y+AVGSADH+IHYYDLRNISQP
Sbjct: 486 GSDDCKVKVWCTRQEASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQP 545

Query: 569 LHVFNGHKKAVSYVKFLSNNELASASTDSTLRLWDVKENLPA------------------ 628
           LHVF+GHKKAVSYVKFLSNNELASASTDSTLRLWDVK+NLP                   
Sbjct: 546 LHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVN 605

Query: 629 -------------------ISKPMAWHRFSS-DLEDNDEDAGSYFISAVCWKSDSPTILT 664
                              I++P+  HRF S D++D +E+AGSYFISAVCWKSDSPT+LT
Sbjct: 606 SEYLACGSETNEVYVYHKEITRPVTSHRFGSPDMDDAEEEAGSYFISAVCWKSDSPTMLT 665

[Close]
BLAST of Lsi02G010800 vs. TAIR 10
Match: AT1G53090.1 (SPA1-related 4 )

HSP 1 Score: 274.2 bits (700), Expect = 2.7e-73
Identity = 174/533 (32.65%), Postives = 281/533 (52.72%), Query Frame = 0 

Query: 173 LAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELY 232
           L E++  ME  +     ++LL FL+ ++++K E  +++Q  +  +  DI  V K++L L 
Sbjct: 275 LEEREAAMELRDRIEEQELLLEFLFLIQQRKQEAADKLQDTISLLSSDIDQVVKRQLVL- 334

Query: 233 RSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINCGTQRSQGWMSSGTSPNPRADAKIQ 292
             +++       LA      +   +   +  N  N   + S+      T  +   ++   
Sbjct: 335 --QQKGRDVRSFLASRKRIRQGAETTAAEEENDDNSIDEESK---LDDTLESTLLESSRL 394

Query: 293 LGSQGPLRKDAYCSSDLHSVAQSGLAVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQED 352
           + +   L    + +       Q   A A ++ +   ++ L        ++   Q  K   
Sbjct: 395 MRNLKKLESVYFAT----RYRQIKAATAAEKPLARYYSALSCNGRSSEKSSMSQPSKDPI 454

Query: 353 RDIKFSSGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEF 412
            D +   G   +P LE     L  ++ +S+LRV A+L+ GDL +S+N+V +I FDRD EF
Sbjct: 455 NDSR--QGGWIDPFLEG----LCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEF 514

Query: 413 FATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIV 472
           FATAGV++ IK+FE  S++ +  D+H+PVVE+++RSKLS + WN Y KS +ASS++EG+V
Sbjct: 515 FATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVV 574

Query: 473 TVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMK 532
            VWDV   Q V E +EHEKR WS+D+S ++P++L SGSDD  VK+W   Q  S+  I  K
Sbjct: 575 QVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK 634

Query: 533 ANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELAS 592
           AN+C V++   +   +A GSADH ++YYDLRN   PL    GH K VSYV+F+ ++ L S
Sbjct: 635 ANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFVDSSTLVS 694

Query: 593 ASTDSTLRLWDVKENLPAISK--------------------------------------- 652
           +STD+TL+LWD+  ++  I++                                       
Sbjct: 695 SSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHK 754

Query: 653 ----PMAWHRFSS--DLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVL 661
               P+  ++F +   + + + D  S FIS+VCW+  S T++ ANS G IK+L
Sbjct: 755 AFPMPVLSYKFKTIDPVSELEVDDASQFISSVCWRGQSSTLVAANSTGNIKIL 791

[Close]
BLAST of Lsi02G010800 vs. TAIR 10
Match: AT1G53090.2 (SPA1-related 4 )

HSP 1 Score: 274.2 bits (700), Expect = 2.7e-73
Identity = 174/533 (32.65%), Postives = 281/533 (52.72%), Query Frame = 0 

Query: 173 LAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELY 232
           L E++  ME  +     ++LL FL+ ++++K E  +++Q  +  +  DI  V K++L L 
Sbjct: 275 LEEREAAMELRDRIEEQELLLEFLFLIQQRKQEAADKLQDTISLLSSDIDQVVKRQLVL- 334

Query: 233 RSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINCGTQRSQGWMSSGTSPNPRADAKIQ 292
             +++       LA      +   +   +  N  N   + S+      T  +   ++   
Sbjct: 335 --QQKGRDVRSFLASRKRIRQGAETTAAEEENDDNSIDEESK---LDDTLESTLLESSRL 394

Query: 293 LGSQGPLRKDAYCSSDLHSVAQSGLAVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQED 352
           + +   L    + +       Q   A A ++ +   ++ L        ++   Q  K   
Sbjct: 395 MRNLKKLESVYFAT----RYRQIKAATAAEKPLARYYSALSCNGRSSEKSSMSQPSKDPI 454

Query: 353 RDIKFSSGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEF 412
            D +   G   +P LE     L  ++ +S+LRV A+L+ GDL +S+N+V +I FDRD EF
Sbjct: 455 NDSR--QGGWIDPFLEG----LCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEF 514

Query: 413 FATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIV 472
           FATAGV++ IK+FE  S++ +  D+H+PVVE+++RSKLS + WN Y KS +ASS++EG+V
Sbjct: 515 FATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVV 574

Query: 473 TVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDMK 532
            VWDV   Q V E +EHEKR WS+D+S ++P++L SGSDD  VK+W   Q  S+  I  K
Sbjct: 575 QVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK 634

Query: 533 ANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELAS 592
           AN+C V++   +   +A GSADH ++YYDLRN   PL    GH K VSYV+F+ ++ L S
Sbjct: 635 ANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFVDSSTLVS 694

Query: 593 ASTDSTLRLWDVKENLPAISK--------------------------------------- 652
           +STD+TL+LWD+  ++  I++                                       
Sbjct: 695 SSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHK 754

Query: 653 ----PMAWHRFSS--DLEDNDEDAGSYFISAVCWKSDSPTILTANSQGTIKVL 661
               P+  ++F +   + + + D  S FIS+VCW+  S T++ ANS G IK+L
Sbjct: 755 AFPMPVLSYKFKTIDPVSELEVDDASQFISSVCWRGQSSTLVAANSTGNIKIL 791

[Close]
BLAST of Lsi02G010800 vs. TAIR 10
Match: AT2G46340.1 (SPA (suppressor of phyA-105) protein family )

HSP 1 Score: 266.9 bits (681), Expect = 4.3e-71
Identity = 178/540 (32.96%), Postives = 271/540 (50.19%), Query Frame = 0 

Query: 172  LLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLEL 231
            L+ E         AE   ++LL FL  L  QK ++ +++  D+  +++DI   E+     
Sbjct: 528  LICEDDSVKSTAAAEEISELLLHFLSSLEVQKKKKASKLLQDIQTLEDDIKEAER----- 587

Query: 232  YRSKERYSGKMKML-ADDTVSTKSRSSLIDKHGNGINCGTQRSQGWMSSGTSPNPRADAK 291
                 RYS  + ++ +   +  + +SS +D+H     C T       S+   P    D  
Sbjct: 588  -----RYSSNVSLVRSHGAIEKRVQSSPLDEH-----CTTS------SALFVPTANTD-- 647

Query: 292  IQLGSQGPLRKDAYCSSDLHSVAQSGLAVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQ 351
             +L S     +DAY          S  A A             D  L+ R    +   + 
Sbjct: 648  -RLMSNIRQLEDAYFFMRSQINLSSSAATAR-----------SDKTLKDRDRCSENQNEN 707

Query: 352  EDRDIKFSSGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDD 411
            +D   K  S +     LE F   L  F RYS+      +R GDL +SA++V S+ FD D+
Sbjct: 708  QDMSTKGKSSDQ----LEVFFEGLCKFARYSKFETCGTIRSGDLLNSASVVCSLSFDPDE 767

Query: 412  EFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEG 471
            E  A AG+S+ IK+F+F++ +NE   VH+P+VEM  +SKLSC+ WN Y K+++AS+DY+G
Sbjct: 768  EHIAAAGISKKIKIFDFNAFMNESVGVHYPLVEMVNKSKLSCVCWNSYIKNYLASTDYDG 827

Query: 472  IVTVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNID 531
            +V +WD  T Q   +Y EH+KRAWSVDFS S+P+  VSGSDDC VK+W   ++ S+  I 
Sbjct: 828  VVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSINEKRSLGTIW 887

Query: 532  MKANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNEL 591
              ANVC V+++  S+  +A GSAD+ ++ YDLR +  P     GH+KAVSYVKF+ +  +
Sbjct: 888  SPANVCCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKFMDSETI 947

Query: 592  ASASTDSTLRLWDV-KENLPAIS------------------------------------- 651
             SASTD++L+LW++ K N   +S                                     
Sbjct: 948  VSASTDNSLKLWNLNKTNSSGLSPGACSLTYKGHTNQKNFVGLSVLDGYIACGSETNEVY 1007

Query: 652  -------KPMAWHRFSS--DLEDNDE-DAGSYFISAVCWKSDSPTILTANSQGTIKVLVL 663
                    PM  ++F S   +  N+  D    F+S+VCW+  S  ++ ANS G +K+L L
Sbjct: 1008 SYYKSLPMPMTSYKFGSVDPISGNEYFDDNGQFVSSVCWRKKSNMLVAANSTGNMKLLKL 1028

[Close]
BLAST of Lsi02G010800 vs. TAIR 10
Match: AT4G11110.1 (SPA1-related 2 )

HSP 1 Score: 259.2 bits (661), Expect = 8.9e-69
Identity = 151/419 (36.04%), Postives = 230/419 (54.89%), Query Frame = 0 

Query: 298  PLRKDAYCSSDLHSVAQSGLAVANKRRVHTQFNELQDCYLQKRR---NWRKQLYKQEDR- 357
            P  ++A  SS   SV +  L     +     F    D +L + R      + L +  D  
Sbjct: 617  PSLEEASSSSPASSVPEMRLIRNINQLESAYFAARIDAHLPEARYRLRPDRDLLRNSDNT 676

Query: 358  --DIKFSSGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDE 417
              +++ S   S +  +  F   L  + RYS+      LR  +L +++N++ S+ FDRD++
Sbjct: 677  VAEVENSETWSSDDRVGAFFDGLCKYARYSKFETRGVLRTSELNNTSNVICSLGFDRDED 736

Query: 418  FFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGI 477
            +FATAGVS+ IK++EF+S+ NE  D+H+P +EM  RSKLS + WN Y ++++ASSDY+GI
Sbjct: 737  YFATAGVSKKIKIYEFNSLFNESVDIHYPAIEMPNRSKLSGVCWNNYIRNYLASSDYDGI 796

Query: 478  VTVWDVNTRQSVMEYEEHEKRAWSVDFSRSEPSMLVSGSDDCKVKIWCTRQEASVFNIDM 537
            V +WDV T Q++  + EHEKRAWSVDFS + P+ L SGSDDC VK+W   +   +  I  
Sbjct: 797  VKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNINERNCLGTIRN 856

Query: 538  KANVCSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELA 597
             ANVC V+++P SS  +A GS+D   + YDLRN+  P  + +GH KAVSY KFL N  L 
Sbjct: 857  IANVCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVSYAKFLDNETLV 916

Query: 598  SASTDSTLRLWDVKENL------------------------------------------- 657
            +ASTD+TL+LWD+K+                                             
Sbjct: 917  TASTDNTLKLWDLKKTTHGGLSTNACSLTFGGHTNEKNFVGLSTSDGYIACGSETNEVYA 976

Query: 658  --PAISKPMAWHRFSS--DLEDND-EDAGSYFISAVCWKSDSPTILTANSQGTIKVLVL 663
               ++  P+  ++F S   +   + E+  + F+S+VCW+  S  +++A+S G+IKVL L
Sbjct: 977  YHRSLPMPITSYKFGSIDPISGKEIEEDNNLFVSSVCWRKRSNMVVSASSNGSIKVLQL 1035

The following BLAST results are available for this feature:
BLAST of Lsi02G010800 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P934711.3e-24263.29E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1[more]
P432546.7e-23964.34E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV... [more]
Q9R1A82.6e-10536.72E3 ubiquitin-protein ligase COP1 OS=Mus musculus OX=10090 GN=Cop1 PE=1 SV=2[more]
Q8NHY27.5e-10536.57E3 ubiquitin-protein ligase COP1 OS=Homo sapiens OX=9606 GN=COP1 PE=1 SV=1[more]
Q94BM73.8e-7232.65Protein SPA1-RELATED 4 OS=Arabidopsis thaliana OX=3702 GN=SPA4 PE=1 SV=1[more]
BLAST of Lsi02G010800 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LYH00.0e+0088.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699620 PE=4 SV=1[more]
A0A5A7TIH50.0e+0089.28E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A1S3C9540.0e+0089.28E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo OX=3656 GN=LOC103498239 PE... [more]
A0A5D3CLL80.0e+0085.66E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A6J1CL470.0e+0088.32E3 ubiquitin-protein ligase COP1-like OS=Momordica charantia OX=3673 GN=LOC11101... [more]
BLAST of Lsi02G010800 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038894733.10.0e+0091.75E3 ubiquitin-protein ligase COP1-like [Benincasa hispida][more]
XP_008458987.10.0e+0089.28PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis melo] >KAA0043144.1 E3... [more]
TYK12320.10.0e+0085.66E3 ubiquitin-protein ligase COP1-like [Cucumis melo var. makuwa][more]
XP_022142505.10.0e+0088.32E3 ubiquitin-protein ligase COP1-like [Momordica charantia][more]
XP_023523813.10.0e+0086.06E3 ubiquitin-protein ligase COP1-like [Cucurbita pepo subsp. pepo][more]
BLAST of Lsi02G010800 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G32950.14.8e-24064.34Transducin/WD40 repeat-like superfamily protein [more]
AT1G53090.12.7e-7332.65SPA1-related 4 [more]
AT1G53090.22.7e-7332.65SPA1-related 4 [more]
AT2G46340.14.3e-7132.96SPA (suppressor of phyA-105) protein family [more]
AT4G11110.18.9e-6936.04SPA1-related 2 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 163..186
NoneNo IPR availablePFAMPF13923zf-C3HC4_2coord: 77..114
e-value: 3.7E-10
score: 39.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..50
NoneNo IPR availablePANTHERPTHR44080:SF2E3 UBIQUITIN-PROTEIN LIGASE COP1coord: 60..609
coord: 611..663
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 486..518
score: 8.597424
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 572..605
score: 10.601049
NoneNo IPR availableCDDcd16504RING-HC_COP1coord: 73..118
e-value: 5.0915E-22
score: 87.3137
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 69..135
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 77..114
e-value: 6.9E-7
score: 38.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 77..114
score: 11.987676
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 437..476
e-value: 2.8
score: 14.1
coord: 479..519
e-value: 1.7E-7
score: 40.9
coord: 520..561
e-value: 0.21
score: 20.7
coord: 565..603
e-value: 9.3E-8
score: 41.8
coord: 382..426
e-value: 0.46
score: 19.2
coord: 621..661
e-value: 290.0
score: 1.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 481..518
e-value: 0.0014
score: 19.4
coord: 567..603
e-value: 4.2E-5
score: 24.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 572..612
score: 12.914561
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 486..518
score: 10.207686
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 369..664
e-value: 4.2E-123
score: 412.5
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 53..166
e-value: 7.5E-20
score: 72.9
IPR042755E3 ubiquitin-protein ligase COP1PANTHERPTHR44080E3 UBIQUITIN-PROTEIN LIGASE COP1coord: 60..609
coord: 611..663
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 590..604
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 92..101
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 399..659

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G010800.1Lsi02G010800.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0016567 protein ubiquitination
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0061630 ubiquitin protein ligase activity