Lsi02G010350 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G010350
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein PHLOEM PROTEIN 2-LIKE A9-like
Location	chr02: 10951587 .. 10953643 (+)
RNA-Seq Expression	Lsi02G010350
Synteny	Lsi02G010350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTTCTCAGCACAACGCGTATTTTTCAATCTTTCCACCTTTACACATCACCTTCCCTCGTAAATGATAACACGAGCACTGTATTTTTAAGATCACTACAAAGAGAAGACCCTCTATTTTACATTTTTCTATGACGGTCGTTCTTATCCACTTTACTCCCTTTATTTCTTCATCCTATAAATCCCTCATTTCAGTGATCTCTCAACTACTCATCATTCTAAAATTGATTTTAAAGTTACAAACACAAATTCAAGTTGTTGAGATCTTCTTGTAGGAGAGCCTTACAAATCCAATAATGACGACCACCTGCCCTCACAGAGAAGCAGATGAAACTGCCATTGAAAAGGACGCCATCAAGGTTTGCTCTTTGCAATTATTATTATTAGTATTATTATTTTTAAATTAAAAATATTTTGTATCAAACTCAAGTTTTTTTTAATCACTATTTCTTACATTTTTCTAACATTATTTGGTATTTTCATTTTATAGGGAATCACCAAAATTTATCCAAGAGGATTTAACATCACATGGGGCAATGATGATCGCTATTGGAATATCACCAACCCCAATGAGTAAGTGTCTCTGATCTTTAACATATGTTAAGAGTATGAATAAAAGAGTAGAATTGTTGTCATTATTTGCTTATATTTTGAGTAGAATACCTAGTAATTTAATATGGAATAAGAGGAGAAAAAATCTTGTGTTTGAACTCCTATGATTTTTTATTTTTTGGTTCTTGTTCTAATTTTCAAGACAACTAGTGAAGGAGAGAATTGAAAATATGAACAAATGAAACATGTTGGTCTAGATGAAATGAATTTTACTTAAAAATGGGGTACTTAGGACAAAGAGTGGAGTTCTAGAGTTTGAAGAGTTGTAGAGTGTGTTTAACTCAAAGAGTTGAGAAATCGGGGTTGGAAAGTAGGAGTATTGAACACACTCCTTGTTTGCCCAAGGAGTTGGTGGGTCCCACCACTAAAAAAACATCAACTTTATATCTTATCAACTACTTACACTGTGGACCTTAGGAGTTTACAATTCTATAGACTTCATAACTCTTTACTCCTCACTATTTCACTTCTCATCCCAAACACTCCCTAAGTCTTAAGGCACATAGTGTAACTTAATAAAGTATAAATTGATTTTTTTTTAGTTACGGAGCCACAAATTTCTTGGACCAAACAAGGAGTGAAGTTCACAACTTTAGTACACCTCCCAACTTTACGTCCTTCGGCAGTTCGGCCAAATACCCTCTTAGGATTCATTATTCTATGAGTTTTCTTGGCAAGCAAAAATAGTTAGATTTGACAATTTTTTTATTAAATTAGTCGAGGCACGTGCAAGTTATAGCTCAAATATGCGAAAAAAATAAATTATATAAATAATAACAAAAGACAGATTAATGTATATATAATATGTGATAATAAGCTGTATAATTTTTTTGCAGGCCAGGAAGTTTGTATATAGCAGAGCTGAAGCAAGTTTCATGGCTTGAAGTGACATGTTCAACTGATAATGTACAAGTTGGGAATAAGTATAGAGTGGGTTTCAATATAACAATGAGACCAGATGCATTTGGATGGGATGAGATTGATGTTTATGTAATGGCTAAGGTTGGGAAGAAAGGGAAGTTCATGTCCATGAAAGTTTCTCTTGGAGACATAAAACCAAATAAAAAACCTATCACAATCCCCAAGGAGCCCTTAGTAATCCCAGTTGATCCTTCAACACCCAAAGAGTTCAAGACAATCCATCTTGGTTTGTATGAAGTTTGGAGTTCAAAGTGGAAGGGGGGATTGCAAATCCATGATGCATTCATTCACAAGGTTGCTTAATTAAACTTTCAGCCATAAACCTGTTATTAGAGATATGAGATTTAATTTATTTTTATTTTTACATGTATAAGGGTGTTTTTTAAGCTTTTTTAATATGTTATGAGTTGATGTTTGTAAAAGTAGGAAGGATGTCTTGGCTATTGTCAATTATGAGATACTGATTTTGTAACTATTTTATTGAAAAATATTTTTATTGTTTGAATTAAATAGAGTATTATGAAA

mRNA sequence

AGTTTCTCAGCACAACGCGTATTTTTCAATCTTTCCACCTTTACACATCACCTTCCCTCGTAAATGATAACACGAGCACTGTATTTTTAAGATCACTACAAAGAGAAGACCCTCTATTTTACATTTTTCTATGACGGTCGTTCTTATCCACTTTACTCCCTTTATTTCTTCATCCTATAAATCCCTCATTTCAGTGATCTCTCAACTACTCATCATTCTAAAATTGATTTTAAAGTTACAAACACAAATTCAAGTTGTTGAGATCTTCTTGTAGGAGAGCCTTACAAATCCAATAATGACGACCACCTGCCCTCACAGAGAAGCAGATGAAACTGCCATTGAAAAGGACGCCATCAAGGGAATCACCAAAATTTATCCAAGAGGATTTAACATCACATGGGGCAATGATGATCGCTATTGGAATATCACCAACCCCAATGAGCCAGGAAGTTTGTATATAGCAGAGCTGAAGCAAGTTTCATGGCTTGAAGTGACATGTTCAACTGATAATGTACAAGTTGGGAATAAGTATAGAGTGGGTTTCAATATAACAATGAGACCAGATGCATTTGGATGGGATGAGATTGATGTTTATGTAATGGCTAAGGTTGGGAAGAAAGGGAAGTTCATGTCCATGAAAGTTTCTCTTGGAGACATAAAACCAAATAAAAAACCTATCACAATCCCCAAGGAGCCCTTAGTAATCCCAGTTGATCCTTCAACACCCAAAGAGTTCAAGACAATCCATCTTGGTTTGTATGAAGTTTGGAGTTCAAAGTGGAAGGGGGGATTGCAAATCCATGATGCATTCATTCACAAGGTTGCTTAATTAAACTTTCAGCCATAAACCTGTTATTAGAGATATGAGATTTAATTTATTTTTATTTTTACATGTATAAGGGTGTTTTTTAAGCTTTTTTAATATGTTATGAGTTGATGTTTGTAAAAGTAGGAAGGATGTCTTGGCTATTGTCAATTATGAGATACTGATTTTGTAACTATTTTATTGAAAAATATTTTTATTGTTTGAATTAAATAGAGTATTATGAAA

Coding sequence (CDS)

ATGACGACCACCTGCCCTCACAGAGAAGCAGATGAAACTGCCATTGAAAAGGACGCCATCAAGGGAATCACCAAAATTTATCCAAGAGGATTTAACATCACATGGGGCAATGATGATCGCTATTGGAATATCACCAACCCCAATGAGCCAGGAAGTTTGTATATAGCAGAGCTGAAGCAAGTTTCATGGCTTGAAGTGACATGTTCAACTGATAATGTACAAGTTGGGAATAAGTATAGAGTGGGTTTCAATATAACAATGAGACCAGATGCATTTGGATGGGATGAGATTGATGTTTATGTAATGGCTAAGGTTGGGAAGAAAGGGAAGTTCATGTCCATGAAAGTTTCTCTTGGAGACATAAAACCAAATAAAAAACCTATCACAATCCCCAAGGAGCCCTTAGTAATCCCAGTTGATCCTTCAACACCCAAAGAGTTCAAGACAATCCATCTTGGTTTGTATGAAGTTTGGAGTTCAAAGTGGAAGGGGGGATTGCAAATCCATGATGCATTCATTCACAAGGTTGCTTAA

Protein sequence

MTTTCPHREADETAIEKDAIKGITKIYPRGFNITWGNDDRYWNITNPNEPGSLYIAELKQVSWLEVTCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGKFMSMKVSLGDIKPNKKPITIPKEPLVIPVDPSTPKEFKTIHLGLYEVWSSKWKGGLQIHDAFIHKVA

Homology

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BLAST of Lsi02G010350 vs. ExPASy Swiss-Prot
Match: Q9SA16 (Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana OX=3702 GN=PP2A9 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.5e-33
Identity = 76/178 (42.70%), Postives = 103/178 (57.87%), Query Frame = 0


Query: 7   HREADETAIEKDAIKGITKIYPRGFNITWGNDDRYWNITNPNEPGSLYIAELKQVSWLEV 66
           H +AD + +E+D  +      P G N  WG D RYW I  P EP     AELK VSWLEV
Sbjct: 8   HHKAD-SKMEQDNNRKAWISQPSGLNFVWGGDSRYWVI--PKEP--RMPAELKMVSWLEV 67

Query: 67  TCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGK-----FMSMKVSLGDI 126
           T S D ++ G  YR+GF I+ +PDA GWD+  V++ AK+GKKGK       S+  + G +
Sbjct: 68  TGSFDKIEPGKTYRIGFKISFKPDATGWDKAPVFMSAKIGKKGKTVWKRIKSVSQNFGIL 127

Query: 127 KPNKKPITIPKEP---LVIPVDPSTPKEFKTIHLGLYEVWSSKWKGGLQIHDAFIHKV 177
           K   +P+ IP E      I V P+   +   +  GLYEVW+ +WK GL IH+AF+ +V
Sbjct: 128 KGGSEPVNIPDESDGLFEILVSPTALNQDTKLQFGLYEVWTGRWKTGLLIHEAFVQEV 180

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BLAST of Lsi02G010350 vs. ExPASy TrEMBL
Match: A0A5A7TIU6 (Protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold110G001140 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.7e-86
Identity = 154/176 (87.50%), Postives = 162/176 (92.05%), Query Frame = 0


Query: 1   MTTTCPHREADETAIEKDAIKGITKIYPRGFNITWGNDDRYWNITNPNEPGSLYIAELKQ 60
           MTTTCPHREADETA EK+ IKGITK+YPRGFNITWGNDDRYWNITNPN PGSLY+AELKQ
Sbjct: 1   MTTTCPHREADETAKEKNVIKGITKVYPRGFNITWGNDDRYWNITNPNVPGSLYMAELKQ 60

Query: 61  VSWLEVTCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGKFMSMKVSLGD 120
           VSWLEVTCSTDNV+VG  YRVGFNITMRPDAFGWD IDVYVMAKVGKKGKF SMKVSLG+
Sbjct: 61  VSWLEVTCSTDNVEVGETYRVGFNITMRPDAFGWDGIDVYVMAKVGKKGKFTSMKVSLGE 120

Query: 121 IKPNKKPITIPKEPLVIPVDPSTPKEFKTIHLGLYEVWSSKWKGGLQIHDAFIHKV 177
           I PN+ PITIPKEPL I V  STPKE +TIHLGLYEVWSSKWKGGLQIHDAFI+KV
Sbjct: 121 IGPNETPITIPKEPLEIFVAHSTPKECRTIHLGLYEVWSSKWKGGLQIHDAFIYKV 176

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BLAST of Lsi02G010350 vs. ExPASy TrEMBL
Match: A0A1S3C9E6 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo OX=3656 GN=LOC103498278 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.7e-86
Identity = 154/176 (87.50%), Postives = 162/176 (92.05%), Query Frame = 0


Query: 1   MTTTCPHREADETAIEKDAIKGITKIYPRGFNITWGNDDRYWNITNPNEPGSLYIAELKQ 60
           MTTTCPHREADETA EK+ IKGITK+YPRGFNITWGNDDRYWNITNPN PGSLY+AELKQ
Sbjct: 1   MTTTCPHREADETAKEKNVIKGITKVYPRGFNITWGNDDRYWNITNPNVPGSLYMAELKQ 60

Query: 61  VSWLEVTCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGKFMSMKVSLGD 120
           VSWLEVTCSTDNV+VG  YRVGFNITMRPDAFGWD IDVYVMAKVGKKGKF SMKVSLG+
Sbjct: 61  VSWLEVTCSTDNVEVGETYRVGFNITMRPDAFGWDGIDVYVMAKVGKKGKFTSMKVSLGE 120

Query: 121 IKPNKKPITIPKEPLVIPVDPSTPKEFKTIHLGLYEVWSSKWKGGLQIHDAFIHKV 177
           I PN+ PITIPKEPL I V  STPKE +TIHLGLYEVWSSKWKGGLQIHDAFI+KV
Sbjct: 121 IGPNETPITIPKEPLEIFVAHSTPKECRTIHLGLYEVWSSKWKGGLQIHDAFIYKV 176

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BLAST of Lsi02G010350 vs. ExPASy TrEMBL
Match: A0A0A0LYR0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G708660 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.4e-79
Identity = 144/178 (80.90%), Postives = 158/178 (88.76%), Query Frame = 0


Query: 1   MTTTCPHREADE-TAIEKDAIKGITKIYPRGFNITWGNDDRYWNITNPNEPGSLYIAELK 60
           MTTTCPHREADE    EK+ IKGITK+YP GFNITWGNDDRYWNIT PN PGSLY+AELK
Sbjct: 1   MTTTCPHREADEINGKEKNFIKGITKVYPTGFNITWGNDDRYWNITKPNVPGSLYVAELK 60

Query: 61  QVSWLEVTCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGKFMSMKVSLG 120
           QVSWLEVTCSTDNV+VG  YRVGFNITM+PDAFGW+ IDVYVMAKVGKKGKF SMKVSL 
Sbjct: 61  QVSWLEVTCSTDNVEVGKYYRVGFNITMKPDAFGWNGIDVYVMAKVGKKGKFTSMKVSLE 120

Query: 121 DIKPNKKPITIPKEPLVIPVDPSTPKEFK-TIHLGLYEVWSSKWKGGLQIHDAFIHKV 177
           +IKP+  PITIPK+PL I V+P TP+E + TIHLGLYEVWSSKWKGG+QIHDAFIH+V
Sbjct: 121 EIKPDNIPITIPKKPLEIFVNPVTPEECRSTIHLGLYEVWSSKWKGGMQIHDAFIHRV 178

[Close]

BLAST of Lsi02G010350 vs. ExPASy TrEMBL
Match: A0A6J1CM42 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Momordica charantia OX=3673 GN=LOC111012557 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 5.7e-71
Identity = 128/176 (72.73%), Postives = 151/176 (85.80%), Query Frame = 0


Query: 1   MTTTCPHREADETAIEKDAIKGITKIYPRGFNITWGNDDRYWNITNPNEPGSLYIAELKQ 60
           M+TT PHR ADETAI+KD  KG  +IYPRGFNITWGNDDRYW+I+N N P S  +AELKQ
Sbjct: 1   MSTTGPHRVADETAIDKDT-KGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQ 60

Query: 61  VSWLEVTCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGKFMSMKVSLGD 120
           VSWLEVTCSTDNV++G  Y+VGFN++M+PDAFGW+ I+VYVMAKVGK GKFM  KVSLGD
Sbjct: 61  VSWLEVTCSTDNVEIGKTYKVGFNVSMKPDAFGWNGIEVYVMAKVGKSGKFMFKKVSLGD 120

Query: 121 IKPNKKPITIPKEPLVIPVDPSTPKEFKTIHLGLYEVWSSKWKGGLQIHDAFIHKV 177
            +PN+K +TIP+EPL I VD STPK+ +TIHLGLYEVW+ KWKGGL+IHDAFI K+
Sbjct: 121 KQPNEK-LTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKI 174

[Close]

BLAST of Lsi02G010350 vs. ExPASy TrEMBL
Match: A0A6J1CKW1 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Momordica charantia OX=3673 GN=LOC111012556 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.9e-67
Identity = 123/174 (70.69%), Postives = 143/174 (82.18%), Query Frame = 0


Query: 3   TTCPHREADETAIEKDAIKGITKIYPRGFNITWGNDDRYWNITNPNEPGSLYIAELKQVS 62
           T  PHR AD+TAI KD  KG T+ YPRG NITWGNDDRYW+I+N N P S  +AELKQVS
Sbjct: 2   TIGPHRVADQTAIAKDT-KGNTRFYPRGLNITWGNDDRYWHISNSNTPKSSSVAELKQVS 61

Query: 63  WLEVTCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGKFMSMKVSLGDIK 122
           WLEVTCSTDNV+VG KY+VGFN++M+PDAFGW+ I+VYVMAKVGK GKFM  KVSLGD K
Sbjct: 62  WLEVTCSTDNVEVGKKYKVGFNVSMKPDAFGWNGIEVYVMAKVGKSGKFMFKKVSLGD-K 121

Query: 123 PNKKPITIPKEPLVIPVDPSTPKEFKTIHLGLYEVWSSKWKGGLQIHDAFIHKV 177
           P  + + IP+EPL I VD STPKE +TIHLGLYEVW+ KWKGGL+IHDAF+  +
Sbjct: 122 PTNQSLKIPEEPLEITVDASTPKELRTIHLGLYEVWTQKWKGGLRIHDAFVQTI 173

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BLAST of Lsi02G010350 vs. NCBI nr
Match: XP_038894850.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida])

HSP 1 Score: 337.8 bits (865), Expect = 5.6e-89
Identity = 157/176 (89.20%), Postives = 164/176 (93.18%), Query Frame = 0


Query: 2   TTTCPHREADETAIEKDAIKGITKIYPRGFNITWGNDDRYWNITNPNEPGSLYIAELKQV 61
           T  CPHREAD+TAIEKD  KGITKIYPRGFNITWGNDDRYWNITNPNEPGSLY+AELKQV
Sbjct: 3   TICCPHREADKTAIEKDTNKGITKIYPRGFNITWGNDDRYWNITNPNEPGSLYMAELKQV 62

Query: 62  SWLEVTCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGKFMSMKVSLGDI 121
           SWLEVTCSTDNV  G+KYRVGFN+TMR DAFGWDEIDVYVMAKVG+KGKFMSMKVSLGD+
Sbjct: 63  SWLEVTCSTDNVDRGSKYRVGFNVTMRSDAFGWDEIDVYVMAKVGRKGKFMSMKVSLGDL 122

Query: 122 KPNKKPITIPKEPLVIPVDPSTPKEFKTIHLGLYEVWSSKWKGGLQIHDAFIHKVA 178
           KPNK PITIPK+PLVI VDPSTP E KTIHLGLYEVWSSKWKGGLQIHDAFI KVA
Sbjct: 123 KPNKTPITIPKDPLVISVDPSTPIECKTIHLGLYEVWSSKWKGGLQIHDAFIQKVA 178

[Close]

BLAST of Lsi02G010350 vs. NCBI nr
Match: XP_008459054.1 (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo] >KAA0043232.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo var. makuwa])

HSP 1 Score: 328.6 bits (841), Expect = 3.4e-86
Identity = 154/176 (87.50%), Postives = 162/176 (92.05%), Query Frame = 0


Query: 1   MTTTCPHREADETAIEKDAIKGITKIYPRGFNITWGNDDRYWNITNPNEPGSLYIAELKQ 60
           MTTTCPHREADETA EK+ IKGITK+YPRGFNITWGNDDRYWNITNPN PGSLY+AELKQ
Sbjct: 1   MTTTCPHREADETAKEKNVIKGITKVYPRGFNITWGNDDRYWNITNPNVPGSLYMAELKQ 60

Query: 61  VSWLEVTCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGKFMSMKVSLGD 120
           VSWLEVTCSTDNV+VG  YRVGFNITMRPDAFGWD IDVYVMAKVGKKGKF SMKVSLG+
Sbjct: 61  VSWLEVTCSTDNVEVGETYRVGFNITMRPDAFGWDGIDVYVMAKVGKKGKFTSMKVSLGE 120

Query: 121 IKPNKKPITIPKEPLVIPVDPSTPKEFKTIHLGLYEVWSSKWKGGLQIHDAFIHKV 177
           I PN+ PITIPKEPL I V  STPKE +TIHLGLYEVWSSKWKGGLQIHDAFI+KV
Sbjct: 121 IGPNETPITIPKEPLEIFVAHSTPKECRTIHLGLYEVWSSKWKGGLQIHDAFIYKV 176

[Close]

BLAST of Lsi02G010350 vs. NCBI nr
Match: XP_004145459.1 (protein PHLOEM PROTEIN 2-LIKE A9 [Cucumis sativus] >KGN66903.1 hypothetical protein Csa_006885 [Cucumis sativus])

HSP 1 Score: 303.9 bits (777), Expect = 9.0e-79
Identity = 144/178 (80.90%), Postives = 158/178 (88.76%), Query Frame = 0


Query: 1   MTTTCPHREADE-TAIEKDAIKGITKIYPRGFNITWGNDDRYWNITNPNEPGSLYIAELK 60
           MTTTCPHREADE    EK+ IKGITK+YP GFNITWGNDDRYWNIT PN PGSLY+AELK
Sbjct: 1   MTTTCPHREADEINGKEKNFIKGITKVYPTGFNITWGNDDRYWNITKPNVPGSLYVAELK 60

Query: 61  QVSWLEVTCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGKFMSMKVSLG 120
           QVSWLEVTCSTDNV+VG  YRVGFNITM+PDAFGW+ IDVYVMAKVGKKGKF SMKVSL 
Sbjct: 61  QVSWLEVTCSTDNVEVGKYYRVGFNITMKPDAFGWNGIDVYVMAKVGKKGKFTSMKVSLE 120

Query: 121 DIKPNKKPITIPKEPLVIPVDPSTPKEFK-TIHLGLYEVWSSKWKGGLQIHDAFIHKV 177
           +IKP+  PITIPK+PL I V+P TP+E + TIHLGLYEVWSSKWKGG+QIHDAFIH+V
Sbjct: 121 EIKPDNIPITIPKKPLEIFVNPVTPEECRSTIHLGLYEVWSSKWKGGMQIHDAFIHRV 178

[Close]

BLAST of Lsi02G010350 vs. NCBI nr
Match: XP_022142416.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Momordica charantia])

HSP 1 Score: 276.9 bits (707), Expect = 1.2e-70
Identity = 128/176 (72.73%), Postives = 151/176 (85.80%), Query Frame = 0


Query: 1   MTTTCPHREADETAIEKDAIKGITKIYPRGFNITWGNDDRYWNITNPNEPGSLYIAELKQ 60
           M+TT PHR ADETAI+KD  KG  +IYPRGFNITWGNDDRYW+I+N N P S  +AELKQ
Sbjct: 1   MSTTGPHRVADETAIDKDT-KGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQ 60

Query: 61  VSWLEVTCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGKFMSMKVSLGD 120
           VSWLEVTCSTDNV++G  Y+VGFN++M+PDAFGW+ I+VYVMAKVGK GKFM  KVSLGD
Sbjct: 61  VSWLEVTCSTDNVEIGKTYKVGFNVSMKPDAFGWNGIEVYVMAKVGKSGKFMFKKVSLGD 120

Query: 121 IKPNKKPITIPKEPLVIPVDPSTPKEFKTIHLGLYEVWSSKWKGGLQIHDAFIHKV 177
            +PN+K +TIP+EPL I VD STPK+ +TIHLGLYEVW+ KWKGGL+IHDAFI K+
Sbjct: 121 KQPNEK-LTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKI 174

[Close]

BLAST of Lsi02G010350 vs. NCBI nr
Match: XP_022142415.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Momordica charantia])

HSP 1 Score: 264.6 bits (675), Expect = 6.0e-67
Identity = 123/174 (70.69%), Postives = 143/174 (82.18%), Query Frame = 0


Query: 3   TTCPHREADETAIEKDAIKGITKIYPRGFNITWGNDDRYWNITNPNEPGSLYIAELKQVS 62
           T  PHR AD+TAI KD  KG T+ YPRG NITWGNDDRYW+I+N N P S  +AELKQVS
Sbjct: 2   TIGPHRVADQTAIAKDT-KGNTRFYPRGLNITWGNDDRYWHISNSNTPKSSSVAELKQVS 61

Query: 63  WLEVTCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGKFMSMKVSLGDIK 122
           WLEVTCSTDNV+VG KY+VGFN++M+PDAFGW+ I+VYVMAKVGK GKFM  KVSLGD K
Sbjct: 62  WLEVTCSTDNVEVGKKYKVGFNVSMKPDAFGWNGIEVYVMAKVGKSGKFMFKKVSLGD-K 121

Query: 123 PNKKPITIPKEPLVIPVDPSTPKEFKTIHLGLYEVWSSKWKGGLQIHDAFIHKV 177
           P  + + IP+EPL I VD STPKE +TIHLGLYEVW+ KWKGGL+IHDAF+  +
Sbjct: 122 PTNQSLKIPEEPLEITVDASTPKELRTIHLGLYEVWTQKWKGGLRIHDAFVQTI 173

[Close]

BLAST of Lsi02G010350 vs. TAIR 10
Match: AT1G31200.1 (phloem protein 2-A9 )

HSP 1 Score: 142.9 bits (359), Expect = 2.5e-34
Identity = 76/178 (42.70%), Postives = 103/178 (57.87%), Query Frame = 0


Query: 7   HREADETAIEKDAIKGITKIYPRGFNITWGNDDRYWNITNPNEPGSLYIAELKQVSWLEV 66
           H +AD + +E+D  +      P G N  WG D RYW I  P EP     AELK VSWLEV
Sbjct: 8   HHKAD-SKMEQDNNRKAWISQPSGLNFVWGGDSRYWVI--PKEP--RMPAELKMVSWLEV 67

Query: 67  TCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGK-----FMSMKVSLGDI 126
           T S D ++ G  YR+GF I+ +PDA GWD+  V++ AK+GKKGK       S+  + G +
Sbjct: 68  TGSFDKIEPGKTYRIGFKISFKPDATGWDKAPVFMSAKIGKKGKTVWKRIKSVSQNFGIL 127

Query: 127 KPNKKPITIPKEP---LVIPVDPSTPKEFKTIHLGLYEVWSSKWKGGLQIHDAFIHKV 177
           K   +P+ IP E      I V P+   +   +  GLYEVW+ +WK GL IH+AF+ +V
Sbjct: 128 KGGSEPVNIPDESDGLFEILVSPTALNQDTKLQFGLYEVWTGRWKTGLLIHEAFVQEV 180

[Close]

BLAST of Lsi02G010350 vs. TAIR 10
Match: AT1G10155.1 (phloem protein 2-A10 )

HSP 1 Score: 132.1 bits (331), Expect = 4.4e-31
Identity = 75/179 (41.90%), Postives = 101/179 (56.42%), Query Frame = 0


Query: 7   HREADETAIEKDAIKGITKIYPRGFNITWGNDDRYWNITNPNEPGSLYIAELKQVSWLEV 66
           H EA E+ +E+D ++      P G N  WG D RYW I  PNE  +   AELK+VSWLEV
Sbjct: 11  HYEA-ESNMEQDIVRKAWVFKPSGLNFIWGGDSRYWVI--PNEDRT--PAELKKVSWLEV 70

Query: 67  TCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKG-----KFMSMKVSLGDI 126
           T S D ++ G  YR+GF I+   DA GWD+  V++ AK+GKKG     +  S+  +   +
Sbjct: 71  TGSYDKIEPGKTYRIGFKISFTADATGWDQAPVFMSAKIGKKGRTIWKRIKSVNNNFDKL 130

Query: 127 KPNKKPITIPKEP---LVIPVDPSTPKEFKT-IHLGLYEVWSSKWKGGLQIHDAFIHKV 177
           K    P+ IP E      I V P       T +  GLYEVW+ KWK GL I++AF+ +V
Sbjct: 131 KGGTGPVNIPDETDGRFEIFVSPKVAINQDTKLQFGLYEVWTGKWKTGLLIYEAFVEEV 184

[Close]

BLAST of Lsi02G010350 vs. TAIR 10
Match: AT5G45080.1 (phloem protein 2-A6 )

HSP 1 Score: 45.8 bits (107), Expect = 4.1e-05
Identity = 27/96 (28.12%), Postives = 49/96 (51.04%), Query Frame = 0


Query: 6   PHREADETAIEKDAIKGITKIYPRGFNITWGNDDRYWNITNPNE-PGS--LYIAELKQVS 65
           P R+ +  A ++ +    + +  R  +IT     + W  +  NE P S  + IA L +V 
Sbjct: 219 PARKPEREASQEGSSVVPSMVPARDLDITHSEKPQKWTWSTINEAPNSAEIEIATLNKVY 278

Query: 66  WLEV--TCSTDNVQVGNKYRVGFNITMRPDAFGWDE 97
           WL++  T +T+N+  G KY   F + +  +A GW++
Sbjct: 279 WLKIVGTITTENLTPGAKYEAVFVVKLENNASGWEQ 314

The following BLAST results are available for this feature:

BLAST of Lsi02G010350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SA16	3.5e-33	42.70	Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana OX=3702 GN=PP2A9 PE=2 S...	[more]

BLAST of Lsi02G010350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TIU6	1.7e-86	87.50	Protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3C9E6	1.7e-86	87.50	protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo OX=3656 GN=LOC103498278 PE...	[more]
A0A0A0LYR0	4.4e-79	80.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G708660 PE=4 SV=1	[more]
A0A6J1CM42	5.7e-71	72.73	protein PHLOEM PROTEIN 2-LIKE A9-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A6J1CKW1	2.9e-67	70.69	protein PHLOEM PROTEIN 2-LIKE A9-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]

BLAST of Lsi02G010350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894850.1	5.6e-89	89.20	protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida]	[more]
XP_008459054.1	3.4e-86	87.50	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo] >KAA0043232.1 pr...	[more]
XP_004145459.1	9.0e-79	80.90	protein PHLOEM PROTEIN 2-LIKE A9 [Cucumis sativus] >KGN66903.1 hypothetical prot...	[more]
XP_022142416.1	1.2e-70	72.73	protein PHLOEM PROTEIN 2-LIKE A9-like [Momordica charantia]	[more]
XP_022142415.1	6.0e-67	70.69	protein PHLOEM PROTEIN 2-LIKE A9-like [Momordica charantia]	[more]

BLAST of Lsi02G010350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31200.1	2.5e-34	42.70	phloem protein 2-A9	[more]
AT1G10155.1	4.4e-31	41.90	phloem protein 2-A10	[more]
AT5G45080.1	4.1e-05	28.13	phloem protein 2-A6	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 26..173 e-value: 2.3E-21 score: 76.4
None	No IPR available	PANTHER	PTHR32278:SF2	PROTEIN PHLOEM PROTEIN 2-LIKE A9	coord: 14..173
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 14..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G010350.1	Lsi02G010350.1	mRNA