Lsi02G009580 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G009580
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Tubulin beta chain
Location	chr02: 9559213 .. 9559848 (-)
RNA-Seq Expression	Lsi02G009580
Synteny	Lsi02G009580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGGTGTTACTTGTTGTCTACGATTCCCTGGACAATTGAACTCTGATCTAAGAAAGCTTGCTGTCAATCTTATTCCATTCCCTCGTCTACATTTCTTTATGGTTGGTTTTGCACCATTAACATCAAGAGGATCCCAGCAGTACCGAGCCCTTACAGTGCCAGAGTTAACCCAGCAGATGTGGGATGCCAAAAACATGATGTGTGCTGCTGATCCACGACACGGTCGGTACCTTACCGCTTCAGCCATGTTCCGTGGCAAGATGAGCACTAAAGAAGTAGATGAGCAGATGATTAATGTACAAAACAAGAACTCATCTTACTTTGTCGAGTGGATACCCAACAACGTGAAGTCTAGCGTCTGTGACATCCCACCCAAGGGTCTGAAAATGGCATCGACTTTCATCGGTAACTCGACTTCGATTCAGGAGATGTTCAGGAGGGTTAGCGAGCAGTTCACAGCCATGTTCAGGCGCAAGGCCTTCTTGCATTGGTACACCGGTGAAGGAATGGACGAAATGGAGTTCACCGAGGCTGAGAGTAACATGAACGATCTGGTCGCCGAGTATCAGCAGTACCAGGATGCAACTGCGGATGAAGAGTATGAAGAGGAAGAAGAGGAAATCCCTGCTTGA

mRNA sequence

ATGAGCGGTGTTACTTGTTGTCTACGATTCCCTGGACAATTGAACTCTGATCTAAGAAAGCTTGCTGTCAATCTTATTCCATTCCCTCGTCTACATTTCTTTATGGTTGGTTTTGCACCATTAACATCAAGAGGATCCCAGCAGTACCGAGCCCTTACAGTGCCAGAGTTAACCCAGCAGATGTGGGATGCCAAAAACATGATGTGTGCTGCTGATCCACGACACGGTCGGTACCTTACCGCTTCAGCCATGTTCCGTGGCAAGATGAGCACTAAAGAAGTAGATGAGCAGATGATTAATGTACAAAACAAGAACTCATCTTACTTTGTCGAGTGGATACCCAACAACGTGAAGTCTAGCGTCTGTGACATCCCACCCAAGGGTCTGAAAATGGCATCGACTTTCATCGGTAACTCGACTTCGATTCAGGAGATGTTCAGGAGGGTTAGCGAGCAGTTCACAGCCATGTTCAGGCGCAAGGCCTTCTTGCATTGGTACACCGGTGAAGGAATGGACGAAATGGAGTTCACCGAGGCTGAGAGTAACATGAACGATCTGGTCGCCGAGTATCAGCAGTACCAGGATGCAACTGCGGATGAAGAGTATGAAGAGGAAGAAGAGGAAATCCCTGCTTGA

Coding sequence (CDS)

ATGAGCGGTGTTACTTGTTGTCTACGATTCCCTGGACAATTGAACTCTGATCTAAGAAAGCTTGCTGTCAATCTTATTCCATTCCCTCGTCTACATTTCTTTATGGTTGGTTTTGCACCATTAACATCAAGAGGATCCCAGCAGTACCGAGCCCTTACAGTGCCAGAGTTAACCCAGCAGATGTGGGATGCCAAAAACATGATGTGTGCTGCTGATCCACGACACGGTCGGTACCTTACCGCTTCAGCCATGTTCCGTGGCAAGATGAGCACTAAAGAAGTAGATGAGCAGATGATTAATGTACAAAACAAGAACTCATCTTACTTTGTCGAGTGGATACCCAACAACGTGAAGTCTAGCGTCTGTGACATCCCACCCAAGGGTCTGAAAATGGCATCGACTTTCATCGGTAACTCGACTTCGATTCAGGAGATGTTCAGGAGGGTTAGCGAGCAGTTCACAGCCATGTTCAGGCGCAAGGCCTTCTTGCATTGGTACACCGGTGAAGGAATGGACGAAATGGAGTTCACCGAGGCTGAGAGTAACATGAACGATCTGGTCGCCGAGTATCAGCAGTACCAGGATGCAACTGCGGATGAAGAGTATGAAGAGGAAGAAGAGGAAATCCCTGCTTGA

Protein sequence

MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEYEEEEEEIPA

Homology

[Close]

BLAST of Lsi02G009580 vs. ExPASy Swiss-Prot
Match: P37832 (Tubulin beta-7 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB7 PE=2 SV=2)

HSP 1 Score: 416.8 bits (1070), Expect = 1.5e-115
Identity = 204/211 (96.68%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPP+GLKMA+TF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPRGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEEYEEEEEEIPA 212
           SNMNDLVAEYQQYQDATADEEYE+EEEE  A
Sbjct: 413 SNMNDLVAEYQQYQDATADEEYEDEEEEAEA 443

[Close]

BLAST of Lsi02G009580 vs. ExPASy Swiss-Prot
Match: Q43594 (Tubulin beta-1 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB1 PE=2 SV=2)

HSP 1 Score: 412.9 bits (1060), Expect = 2.1e-114
Identity = 204/212 (96.23%), Postives = 209/212 (98.58%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPP+GL MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEE--YEEEEEEIP 211
           SNMNDLV+EYQQYQDATADEE  YE+EEE++P
Sbjct: 413 SNMNDLVSEYQQYQDATADEEGDYEDEEEQVP 444

[Close]

BLAST of Lsi02G009580 vs. ExPASy Swiss-Prot
Match: Q6VAF7 (Tubulin beta-5 chain OS=Gossypium hirsutum OX=3635 PE=2 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 2.8e-114
Identity = 204/208 (98.08%), Postives = 206/208 (99.04%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTA AMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDAKNMMCAADPRHGRYLTACAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEEYEEEEEE 209
           S+MNDLVAEYQQYQDATAD+EYEE EEE
Sbjct: 413 SDMNDLVAEYQQYQDATADDEYEEGEEE 440

[Close]

BLAST of Lsi02G009580 vs. ExPASy Swiss-Prot
Match: Q41783 (Tubulin beta-6 chain OS=Zea mays OX=4577 GN=TUBB6 PE=2 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 6.3e-114
Identity = 203/211 (96.21%), Postives = 207/211 (98.10%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPP+GL MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEEYEEEEEEIPA 212
           SNMNDLV+EYQQYQDATADEE  E+EEE+ A
Sbjct: 413 SNMNDLVSEYQQYQDATADEEEYEDEEEVQA 443

[Close]

BLAST of Lsi02G009580 vs. ExPASy Swiss-Prot
Match: Q9ZPP0 (Tubulin beta-1 chain OS=Eleusine indica OX=29674 GN=TUBB1 PE=2 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 1.1e-113
Identity = 204/213 (95.77%), Postives = 209/213 (98.12%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWD+KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPP GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPNGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATA--DEEYEEEEEEIPA 212
           SNMNDLVAEYQQYQDATA  +EEYE+EEEE+ A
Sbjct: 413 SNMNDLVAEYQQYQDATAEDEEEYEDEEEEMAA 445

[Close]

BLAST of Lsi02G009580 vs. ExPASy TrEMBL
Match: A0A0A0LVT8 (Tubulin beta chain OS=Cucumis sativus OX=3659 GN=Csa_1G537560 PE=3 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.5e-115
Identity = 210/211 (99.53%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEEYEEEEEEIPA 212
           SNMNDLVAEYQQYQDATADEEYE+EEEEIPA
Sbjct: 413 SNMNDLVAEYQQYQDATADEEYEDEEEEIPA 443

[Close]

BLAST of Lsi02G009580 vs. ExPASy TrEMBL
Match: A0A6J1CH84 (Tubulin beta chain OS=Momordica charantia OX=3673 GN=LOC111010833 PE=3 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 3.4e-115
Identity = 209/211 (99.05%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEEYEEEEEEIPA 212
           SNMNDLVAEYQQYQDATADEEYE+E+EEIPA
Sbjct: 413 SNMNDLVAEYQQYQDATADEEYEDEDEEIPA 443

[Close]

BLAST of Lsi02G009580 vs. ExPASy TrEMBL
Match: A0A5A7V848 (Tubulin beta chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold178G00090 PE=3 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 4.5e-115
Identity = 209/210 (99.52%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEEYEEEEEEIP 211
           SNMNDLVAEYQQYQDATADEEYE+EEEEIP
Sbjct: 413 SNMNDLVAEYQQYQDATADEEYEDEEEEIP 442

[Close]

BLAST of Lsi02G009580 vs. ExPASy TrEMBL
Match: A0A6J1K657 (Tubulin beta chain OS=Cucurbita maxima OX=3661 GN=LOC111490427 PE=3 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 4.5e-115
Identity = 209/211 (99.05%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEEYEEEEEEIPA 212
           SNMNDLVAEYQQYQDATA+EEYE+EEEEIPA
Sbjct: 413 SNMNDLVAEYQQYQDATAEEEYEDEEEEIPA 443

[Close]

BLAST of Lsi02G009580 vs. ExPASy TrEMBL
Match: A0A6J1GQY6 (Tubulin beta chain OS=Cucurbita moschata OX=3662 GN=LOC111456680 PE=3 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 4.5e-115
Identity = 209/211 (99.05%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEEYEEEEEEIPA 212
           SNMNDLVAEYQQYQDATA+EEYE+EEEEIPA
Sbjct: 413 SNMNDLVAEYQQYQDATAEEEYEDEEEEIPA 443

[Close]

BLAST of Lsi02G009580 vs. NCBI nr
Match: XP_004135544.1 (tubulin beta chain [Cucumis sativus] >XP_038894377.1 tubulin beta chain [Benincasa hispida] >KGN65908.1 hypothetical protein Csa_023215 [Cucumis sativus])

HSP 1 Score: 425.2 bits (1092), Expect = 3.2e-115
Identity = 210/211 (99.53%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEEYEEEEEEIPA 212
           SNMNDLVAEYQQYQDATADEEYE+EEEEIPA
Sbjct: 413 SNMNDLVAEYQQYQDATADEEYEDEEEEIPA 443

[Close]

BLAST of Lsi02G009580 vs. NCBI nr
Match: XP_022140098.1 (tubulin beta chain [Momordica charantia])

HSP 1 Score: 424.1 bits (1089), Expect = 7.1e-115
Identity = 209/211 (99.05%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEEYEEEEEEIPA 212
           SNMNDLVAEYQQYQDATADEEYE+E+EEIPA
Sbjct: 413 SNMNDLVAEYQQYQDATADEEYEDEDEEIPA 443

[Close]

BLAST of Lsi02G009580 vs. NCBI nr
Match: XP_022954422.1 (tubulin beta chain [Cucurbita moschata] >XP_022994808.1 tubulin beta chain [Cucurbita maxima] >XP_023541689.1 tubulin beta chain [Cucurbita pepo subsp. pepo] >KAG6573412.1 Tubulin beta-3 chain, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 423.7 bits (1088), Expect = 9.3e-115
Identity = 209/211 (99.05%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEEYEEEEEEIPA 212
           SNMNDLVAEYQQYQDATA+EEYE+EEEEIPA
Sbjct: 413 SNMNDLVAEYQQYQDATAEEEYEDEEEEIPA 443

[Close]

BLAST of Lsi02G009580 vs. NCBI nr
Match: KAG7012572.1 (Tubulin beta-3 chain [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 423.7 bits (1088), Expect = 9.3e-115
Identity = 209/211 (99.05%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 223 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 282

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS
Sbjct: 283 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 342

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 343 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 402

Query: 181 SNMNDLVAEYQQYQDATADEEYEEEEEEIPA 212
           SNMNDLVAEYQQYQDATA+EEYE+EEEEIPA
Sbjct: 403 SNMNDLVAEYQQYQDATAEEEYEDEEEEIPA 433

[Close]

BLAST of Lsi02G009580 vs. NCBI nr
Match: XP_008445559.1 (PREDICTED: tubulin beta chain [Cucumis melo] >KAA0063758.1 tubulin beta chain [Cucumis melo var. makuwa] >TYK05510.1 tubulin beta chain [Cucumis melo var. makuwa])

HSP 1 Score: 423.7 bits (1088), Expect = 9.3e-115
Identity = 209/210 (99.52%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEEYEEEEEEIP 211
           SNMNDLVAEYQQYQDATADEEYE+EEEEIP
Sbjct: 413 SNMNDLVAEYQQYQDATADEEYEDEEEEIP 442

[Close]

BLAST of Lsi02G009580 vs. TAIR 10
Match: AT5G23860.1 (tubulin beta 8 )

HSP 1 Score: 408.3 bits (1048), Expect = 3.8e-114
Identity = 203/211 (96.21%), Postives = 207/211 (98.10%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKS+
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKST 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPP GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEE--YEEEEEEI 210
           SNMNDLV+EYQQYQDATADEE  YE EE+E+
Sbjct: 413 SNMNDLVSEYQQYQDATADEEEGYEYEEDEV 443

[Close]

BLAST of Lsi02G009580 vs. TAIR 10
Match: AT5G23860.2 (tubulin beta 8 )

HSP 1 Score: 408.3 bits (1048), Expect = 3.8e-114
Identity = 203/211 (96.21%), Postives = 207/211 (98.10%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKS+
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKST 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPP GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEE--YEEEEEEI 210
           SNMNDLV+EYQQYQDATADEE  YE EE+E+
Sbjct: 413 SNMNDLVSEYQQYQDATADEEEGYEYEEDEV 443

[Close]

BLAST of Lsi02G009580 vs. TAIR 10
Match: AT2G29550.1 (tubulin beta-7 chain )

HSP 1 Score: 406.0 bits (1042), Expect = 1.9e-113
Identity = 201/208 (96.63%), Postives = 204/208 (98.08%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR LTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKS+
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKST 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPP GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEEYEEEEEE 209
           SNMNDLV+EYQQYQDATADEE E EEEE
Sbjct: 413 SNMNDLVSEYQQYQDATADEEGEYEEEE 440

[Close]

BLAST of Lsi02G009580 vs. TAIR 10
Match: AT5G62690.1 (tubulin beta chain 2 )

HSP 1 Score: 405.2 bits (1040), Expect = 3.2e-113
Identity = 200/209 (95.69%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR+LTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWD+KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKS+
Sbjct: 293 MWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKST 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPP GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEE--YEEEEE 208
           SNMNDLV+EYQQYQDATADEE  YE+EEE
Sbjct: 413 SNMNDLVSEYQQYQDATADEEGDYEDEEE 441

[Close]

BLAST of Lsi02G009580 vs. TAIR 10
Match: AT5G62700.1 (tubulin beta chain 3 )

HSP 1 Score: 405.2 bits (1040), Expect = 3.2e-113
Identity = 200/209 (95.69%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR+LTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWD+KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKS+
Sbjct: 293 MWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKST 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPP GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEE--YEEEEE 208
           SNMNDLV+EYQQYQDATADEE  YE+EEE
Sbjct: 413 SNMNDLVSEYQQYQDATADEEGDYEDEEE 441

The following BLAST results are available for this feature:

BLAST of Lsi02G009580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P37832	1.5e-115	96.68	Tubulin beta-7 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB7 PE=2 SV=2	[more]
Q43594	2.1e-114	96.23	Tubulin beta-1 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB1 PE=2 SV=2	[more]
Q6VAF7	2.8e-114	98.08	Tubulin beta-5 chain OS=Gossypium hirsutum OX=3635 PE=2 SV=1	[more]
Q41783	6.3e-114	96.21	Tubulin beta-6 chain OS=Zea mays OX=4577 GN=TUBB6 PE=2 SV=1	[more]
Q9ZPP0	1.1e-113	95.77	Tubulin beta-1 chain OS=Eleusine indica OX=29674 GN=TUBB1 PE=2 SV=1	[more]

BLAST of Lsi02G009580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVT8	1.5e-115	99.53	Tubulin beta chain OS=Cucumis sativus OX=3659 GN=Csa_1G537560 PE=3 SV=1	[more]
A0A6J1CH84	3.4e-115	99.05	Tubulin beta chain OS=Momordica charantia OX=3673 GN=LOC111010833 PE=3 SV=1	[more]
A0A5A7V848	4.5e-115	99.52	Tubulin beta chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold178G0...	[more]
A0A6J1K657	4.5e-115	99.05	Tubulin beta chain OS=Cucurbita maxima OX=3661 GN=LOC111490427 PE=3 SV=1	[more]
A0A6J1GQY6	4.5e-115	99.05	Tubulin beta chain OS=Cucurbita moschata OX=3662 GN=LOC111456680 PE=3 SV=1	[more]

BLAST of Lsi02G009580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135544.1	3.2e-115	99.53	tubulin beta chain [Cucumis sativus] >XP_038894377.1 tubulin beta chain [Beninca...	[more]
XP_022140098.1	7.1e-115	99.05	tubulin beta chain [Momordica charantia]	[more]
XP_022954422.1	9.3e-115	99.05	tubulin beta chain [Cucurbita moschata] >XP_022994808.1 tubulin beta chain [Cucu...	[more]
KAG7012572.1	9.3e-115	99.05	Tubulin beta-3 chain [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008445559.1	9.3e-115	99.52	PREDICTED: tubulin beta chain [Cucumis melo] >KAA0063758.1 tubulin beta chain [C...	[more]

BLAST of Lsi02G009580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23860.1	3.8e-114	96.21	tubulin beta 8	[more]
AT5G23860.2	3.8e-114	96.21	tubulin beta 8	[more]
AT2G29550.1	1.9e-113	96.63	tubulin beta-7 chain	[more]
AT5G62690.1	3.2e-113	95.69	tubulin beta chain 2	[more]
AT5G62700.1	3.2e-113	95.69	tubulin beta chain 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 176..196
None	No IPR available	PANTHER	PTHR11588:SF387	TUBULIN BETA CHAIN	coord: 1..205
None	No IPR available	CDD	cd02187	beta_tubulin	coord: 1..194 e-value: 1.99518E-153 score: 430.064
IPR002453	Beta tubulin	PRINTS	PR01163	BETATUBULIN	coord: 145..156 score: 79.05 coord: 115..138 score: 79.4 coord: 13..26 score: 88.61 coord: 79..97 score: 80.51 coord: 97..111 score: 87.09 coord: 33..49 score: 86.49 coord: 180..198 score: 89.35
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	SMART	SM00865	Tubulin_C_4	coord: 14..151 e-value: 5.0E-42 score: 155.6
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	PFAM	PF03953	Tubulin_C	coord: 29..150 e-value: 1.4E-39 score: 135.1
IPR037103	Tubulin/FtsZ-like, C-terminal domain	GENE3D	3.30.1330.20		coord: 31..141 e-value: 6.3E-42 score: 144.4
IPR023123	Tubulin, C-terminal	GENE3D	1.10.287.600	Helix hairpin bin	coord: 142..198 e-value: 3.2E-35 score: 121.7
IPR036525	Tubulin/FtsZ, GTPase domain superfamily	GENE3D	3.40.50.1440	Tubulin/FtsZ, GTPase domain	coord: 1..30 e-value: 9.6E-9 score: 37.0
IPR000217	Tubulin	PANTHER	PTHR11588	TUBULIN	coord: 1..205
IPR008280	Tubulin/FtsZ, C-terminal	SUPERFAMILY	55307	Tubulin C-terminal domain-like	coord: 12..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G009580.1	Lsi02G009580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000226	microtubule cytoskeleton organization
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005874	microtubule
molecular_function	GO:0016757	glycosyltransferase activity
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005200	structural constituent of cytoskeleton