Homology
BLAST of Lsi02G007940 vs. ExPASy Swiss-Prot
Match:
Q1PFQ9 (Pentatricopeptide repeat-containing protein At1g28690, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E34 PE=2 SV=2)
HSP 1 Score: 635.6 bits (1638), Expect = 5.1e-181
Identity = 327/518 (63.13%), Postives = 401/518 (77.41%), Query Frame = 0
Query: 1 MKNGRFQSVIHRIFSSLSEYAPSFAATQISNQTSTS-LSSALQHYINSDDPSHGQKIHAH 60
M+ RF S+ RI S + Y+ +S+ + ++ ALQ +INS P G+KIHA
Sbjct: 1 MRIFRFTSISPRILPS-NHYSTFPLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHAD 60
Query: 61 ILKTGFIPNTNISIKLLILHLKCGSLKFARQVFDALPQKTLSAYNYMIGGYIKMGKVPES 120
I+KTGF P+ NISIKLLILHLKCG L +ARQVFD LP+ TLSAYNYMI GY+K G V E
Sbjct: 61 IIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKEL 120
Query: 121 LALVRELISSGERPDGYTFSMLLKASTCAHGDSV-PRSLGRVVHAQILKSDVSSDDVLYT 180
L LV+ + SGE+ DGYT SM+LKAS + PRSL R+VHA+I+K DV DDVL T
Sbjct: 121 LLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLIT 180
Query: 181 TLVDSYVKNGDIYFARMVFDLMLKKNVICSTSMISGYMNQGLVEDAEEIFSKTVEKDIVV 240
LVD+YVK+G + AR VF+ M +NV+C TSMISGYMNQG VEDAEEIF+ T KDIVV
Sbjct: 181 ALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVV 240
Query: 241 FNAMVEGYSKTHEHAKKSLEVYIDMQRLCFSPNISTFSSVIGACSMLAAFEAGQQIQCQL 300
+NAMVEG+S++ E AK+S+++YI MQR F PNISTF+SVIGACS+L + E GQQ+ Q+
Sbjct: 241 YNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQI 300
Query: 301 MKTKFFTDIRMGSALLDMYSKCGRTEDARRVFDQMPERNVFSWTSMIDGYGKNGYPSEAL 360
MK+ +T I+MGS+LLDMY+KCG DARRVFDQM E+NVFSWTSMIDGYGKNG P EAL
Sbjct: 301 MKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEAL 360
Query: 361 ELFCIMQEEHQIQPNFVTFLSALSACAHGGLVEKGWEIFESMERDYLLKPKMEHYACMVD 420
ELF M +E +I+PN+VTFL ALSAC+H GLV+KG+EIFESM+RDY +KPKMEHYAC+VD
Sbjct: 361 ELFTRM-KEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVD 420
Query: 421 LLGRAGRLLQAWEFIMQMPETPNSDIWAALLSSAKLHGNIEMACIAANELFKLNADSRPG 480
L+GRAG L +A+EF MPE P+SDIWAALLSS LHGN+E+A IAA+ELFKLNAD RPG
Sbjct: 421 LMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPG 480
Query: 481 AYVALSNTFAEAGKWDNVTELRELMKIRRV-KCKGSSW 516
AY+ALSN +A KWDNV+++RE+MK RR+ K G SW
Sbjct: 481 AYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSW 516
BLAST of Lsi02G007940 vs. ExPASy Swiss-Prot
Match:
Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)
HSP 1 Score: 309.7 bits (792), Expect = 6.4e-83
Identity = 177/489 (36.20%), Postives = 287/489 (58.69%), Query Frame = 0
Query: 36 SLSSALQHYINSDDPSHGQKIHAHILKTGFIPNTNISIKLLILHLKCGSLKFARQVFDAL 95
S +S L +D + G ++H+ I K+ F+ + I L+ ++ KCG++ A++VFD +
Sbjct: 154 SFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEM 213
Query: 96 PQKTLSAYNYMIGGYIKMGKVPESLALVRELISSGERPDGYTFSMLLKASTCAHGDSVPR 155
+ + ++N +I + + G E+L + + ++ S PD T + ++ S CA ++
Sbjct: 214 GDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVI--SACASLSAI-- 273
Query: 156 SLGRVVHAQILKSD-VSSDDVLYTTLVDSYVKNGDIYFARMVFDLMLKKNVICSTSMISG 215
+G+ VH +++K+D + +D +L VD Y K I AR +FD M +NVI TSMISG
Sbjct: 274 KVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISG 333
Query: 216 YMNQGLVEDAEEIFSKTVEKDIVVFNAMVEGYSKTHEHAKKSLEVYIDMQRLCFSPNIST 275
Y + A +F+K E+++V +NA++ GY++ E+ +++L ++ ++R P +
Sbjct: 334 YAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGEN-EEALSLFCLLKRESVCPTHYS 393
Query: 276 FSSVIGACSMLAAFEAGQQIQCQLMKTKF------FTDIRMGSALLDMYSKCGRTEDARR 335
F++++ AC+ LA G Q ++K F DI +G++L+DMY KCG E+
Sbjct: 394 FANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYL 453
Query: 336 VFDQMPERNVFSWTSMIDGYGKNGYPSEALELFCIMQEEHQIQPNFVTFLSALSACAHGG 395
VF +M ER+ SW +MI G+ +NGY +EALELF M E + +P+ +T + LSAC H G
Sbjct: 454 VFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGE-KPDHITMIGVLSACGHAG 513
Query: 396 LVEKGWEIFESMERDYLLKPKMEHYACMVDLLGRAGRLLQAWEFIMQMPETPNSDIWAAL 455
VE+G F SM RD+ + P +HY CMVDLLGRAG L +A I +MP P+S IW +L
Sbjct: 514 FVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSL 573
Query: 456 LSSAKLHGNIEMACIAANELFKLNADSRPGAYVALSNTFAEAGKWDNVTELRELMKIRRV 515
L++ K+H NI + A +L ++ S G YV LSN +AE GKW++V +R+ M+ V
Sbjct: 574 LAACKVHRNITLGKYVAEKLLEVE-PSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGV 633
Query: 516 -KCKGSSWV 517
K G SW+
Sbjct: 634 TKQPGCSWI 635
BLAST of Lsi02G007940 vs. ExPASy Swiss-Prot
Match:
Q9LIC3 (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H85 PE=3 SV=1)
HSP 1 Score: 300.8 bits (769), Expect = 3.0e-80
Identity = 161/466 (34.55%), Postives = 269/466 (57.73%), Query Frame = 0
Query: 53 GQKIHAHILKTGFIPNTNISIKLLILHLKCGSLKFARQVFDALPQKTLSAYNYMIGGYIK 112
GQ++HAH++KT ++P T + +LLI + KC L+ AR+V D +P+K + ++ MI Y +
Sbjct: 71 GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQ 130
Query: 113 MGKVPESLALVRELISSGERPDGYTFSMLLKASTCAHGDSVPRSLGRVVHAQILKSDVSS 172
G E+L + E++ S +P+ +TF+ +L + A G LG+ +H I+K + S
Sbjct: 131 TGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASG----LGLGKQIHGLIVKWNYDS 190
Query: 173 DDVLYTTLVDSYVKNGDIYFARMVFDLMLKKNVICSTSMISGYMNQGLVEDAEEIFSKTV 232
+ ++L+D Y K G I AR +F+ + +++V+ T++I+GY GL E+A E+F +
Sbjct: 191 HIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLH 250
Query: 233 EKDIVVFNAMVEGYSKTHEHAKKSLEVYIDMQRLCFSPNISTFSSVIGACSMLAAFEAGQ 292
+ + SPN T++S++ A S LA + G+
Sbjct: 251 SEGM--------------------------------SPNYVTYASLLTALSGLALLDHGK 310
Query: 293 QIQCQLMKTKFFTDIRMGSALLDMYSKCGRTEDARRVFDQMPERNVFSWTSMIDGYGKNG 352
Q C +++ + + ++L+DMYSKCG ARR+FD MPER SW +M+ GY K+G
Sbjct: 311 QAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHG 370
Query: 353 YPSEALELFCIMQEEHQIQPNFVTFLSALSACAHGGLVEKGWEIFESM-ERDYLLKPKME 412
E LELF +M++E +++P+ VT L+ LS C+HG + + G IF+ M +Y KP E
Sbjct: 371 LGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTE 430
Query: 413 HYACMVDLLGRAGRLLQAWEFIMQMPETPNSDIWAALLSSAKLHGNIEMACIAANELFKL 472
HY C+VD+LGRAGR+ +A+EFI +MP P + + +LL + ++H ++++ L ++
Sbjct: 431 HYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEI 490
Query: 473 NADSRPGAYVALSNTFAEAGKWDNVTELRELMKIRRV-KCKGSSWV 517
++ G YV LSN +A AG+W +V +R +M + V K G SW+
Sbjct: 491 EPEN-AGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWI 499
BLAST of Lsi02G007940 vs. ExPASy Swiss-Prot
Match:
Q9FNN7 (Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E20 PE=2 SV=1)
HSP 1 Score: 296.6 bits (758), Expect = 5.6e-79
Identity = 167/453 (36.87%), Postives = 266/453 (58.72%), Query Frame = 0
Query: 54 QKIHAHILKTGFIPNTNISIKLLILHLKCGSLKFARQVFDALPQKTLSAYNYMIGGYIKM 113
+++HAH L+TG ++ +LL++ +L +AR++FD YN +I Y
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLLLI----PNLVYARKLFDHHQNSCTFLYNKLIQAYYVH 64
Query: 114 GKVPESLALVRELISSGERPDGYTFSMLLKASTCAHGDSVPRSLGRVVHAQILKSDVSSD 173
+ ES+ L L G RP +TF+ + AS S R L R++H+Q +S SD
Sbjct: 65 HQPHESIVLYNLLSFDGLRPSHHTFNFIFAASA---SFSSARPL-RLLHSQFFRSGFESD 124
Query: 174 DVLYTTLVDSYVKNGDIYFARMVFDLMLKKNVICSTSMISGYMNQGLVEDAEEIFSKTVE 233
TTL+ +Y K G + AR VFD M K++V +MI+GY +G ++ A E+F
Sbjct: 125 SFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPR 184
Query: 234 KDIVVFNAMVEGYSKTHEHAKKSLEVYIDMQR-LCFSPNISTFSSVIGACSMLAAFEAGQ 293
K++ + ++ G+S+ ++ ++L++++ M++ PN T SV+ AC+ L E G+
Sbjct: 185 KNVTSWTTVISGFSQNGNYS-EALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGR 244
Query: 294 QIQCQLMKTKFFTDIRMGSALLDMYSKCGRTEDARRVFDQM-PERNVFSWTSMIDGYGKN 353
+++ + FF +I + +A ++MYSKCG + A+R+F+++ +RN+ SW SMI +
Sbjct: 245 RLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATH 304
Query: 354 GYPSEALELFCIMQEEHQIQPNFVTFLSALSACAHGGLVEKGWEIFESMERDYLLKPKME 413
G EAL LF M E + +P+ VTF+ L AC HGG+V KG E+F+SME + + PK+E
Sbjct: 305 GKHDEALTLFAQMLREGE-KPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLE 364
Query: 414 HYACMVDLLGRAGRLLQAWEFIMQMPETPNSDIWAALLSSAKLHGNIEMACIAANELFKL 473
HY CM+DLLGR G+L +A++ I MP P++ +W LL + HGN+E+A IA+ LFKL
Sbjct: 365 HYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKL 424
Query: 474 NADSRPGAYVALSNTFAEAGKWDNVTELRELMK 505
+ PG V +SN +A KWD V +R+LMK
Sbjct: 425 E-PTNPGNCVIMSNIYAANEKWDGVLRMRKLMK 446
BLAST of Lsi02G007940 vs. ExPASy Swiss-Prot
Match:
O23337 (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H3 PE=2 SV=1)
HSP 1 Score: 293.9 bits (751), Expect = 3.6e-78
Identity = 160/463 (34.56%), Postives = 261/463 (56.37%), Query Frame = 0
Query: 53 GQKIHAHILKTGFIPNTNISIKLLILHLKCGSLKFARQVFDALPQKTLSAYNYMIGGYIK 112
G ++H K + + + + ++ CG + +AR VFD + + + +N MI Y +
Sbjct: 130 GMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCR 189
Query: 113 MGKVPESLALVRELISSGERPDGYTFSMLLKASTCAHGDSVPRSLGRVVHAQILKSDVSS 172
G V E+ L E+ S PD M+L A G + R ++ ++++DV
Sbjct: 190 FGLVDEAFKLFEEMKDSNVMPD----EMILCNIVSACGRTGNMRYNRAIYEFLIENDVRM 249
Query: 173 DDVLYTTLVDSYVKNGDIYFARMVFDLMLKKNVICSTSMISGYMNQGLVEDAEEIFSKTV 232
D L T LV Y G + AR F M +N+ ST+M+SGY G ++DA+ IF +T
Sbjct: 250 DTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTE 309
Query: 233 EKDIVVFNAMVEGYSKTHEHAKKSLEVYIDMQRLCFSPNISTFSSVIGACSMLAAFEAGQ 292
+KD+V + M+ Y ++ ++ +++L V+ +M P++ + SVI AC+ L + +
Sbjct: 310 KKDLVCWTTMISAYVES-DYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAK 369
Query: 293 QIQCQLMKTKFFTDIRMGSALLDMYSKCGRTEDARRVFDQMPERNVFSWTSMIDGYGKNG 352
+ + +++ + +AL++MY+KCG + R VF++MP RNV SW+SMI+ +G
Sbjct: 370 WVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHG 429
Query: 353 YPSEALELFCIMQEEHQIQPNFVTFLSALSACAHGGLVEKGWEIFESMERDYLLKPKMEH 412
S+AL LF M++E+ ++PN VTF+ L C+H GLVE+G +IF SM +Y + PK+EH
Sbjct: 430 EASDALSLFARMKQEN-VEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEH 489
Query: 413 YACMVDLLGRAGRLLQAWEFIMQMPETPNSDIWAALLSSAKLHGNIEMACIAANELFKLN 472
Y CMVDL GRA L +A E I MP N IW +L+S+ ++HG +E+ AA + +L
Sbjct: 490 YGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELE 549
Query: 473 ADSRPGAYVALSNTFAEAGKWDNVTELRELMKIRRV-KCKGSS 515
D GA V +SN +A +W++V +R +M+ + V K KG S
Sbjct: 550 PD-HDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLS 585
BLAST of Lsi02G007940 vs. ExPASy TrEMBL
Match:
A0A0A0LX92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G478080 PE=4 SV=1)
HSP 1 Score: 961.4 bits (2484), Expect = 1.5e-276
Identity = 471/523 (90.06%), Postives = 499/523 (95.41%), Query Frame = 0
Query: 1 MKNGRFQSVIHRIFSSLSEYAPSFAATQISNQTSTSLSSALQHYINSDDPSHGQKIHAHI 60
MKN RF+SV HR+FSSL +Y PSFA TQ SNQTSTSLSSALQHYINSDDPSHG KIHAHI
Sbjct: 1 MKNDRFKSVTHRVFSSLIDYVPSFAPTQTSNQTSTSLSSALQHYINSDDPSHGLKIHAHI 60
Query: 61 LKTGFIPNTNISIKLLILHLKCGSLKFARQVFDALPQKTLSAYNYMIGGYIKMGKVPESL 120
LKTGFIPNTNISIKLLILHLKC SLKFARQ FDALPQKTLSAYNYMIGGY+KMG+VPESL
Sbjct: 61 LKTGFIPNTNISIKLLILHLKCKSLKFARQAFDALPQKTLSAYNYMIGGYMKMGEVPESL 120
Query: 121 ALVRELISSGERPDGYTFSMLLKASTCAHGDSVPRSLGRVVHAQILKSDVSSDDVLYTTL 180
LVRELI SGE+PDG+TFSMLLKAST A D VPRSLGRVVHAQILKS+VS DDVLYT L
Sbjct: 121 PLVRELICSGEKPDGFTFSMLLKASTLAREDFVPRSLGRVVHAQILKSNVSPDDVLYTAL 180
Query: 181 VDSYVKNGDIYFARMVFDLMLKKNVICSTSMISGYMNQGLVEDAEEIFSKTVEKDIVVFN 240
VDSY+KNGD+Y ARMVFDLMLKKNVICSTSMISGYMN+GLV+DAEEIF KTVEKDIVVFN
Sbjct: 181 VDSYIKNGDVYIARMVFDLMLKKNVICSTSMISGYMNRGLVKDAEEIFRKTVEKDIVVFN 240
Query: 241 AMVEGYSKTHEHAKKSLEVYIDMQRLCFSPNISTFSSVIGACSMLAAFEAGQQIQCQLMK 300
AM+EGYSKTHEHAKKSLE YIDMQRLCFSPNISTFSSVIGACS+LAAFEAGQQIQCQLMK
Sbjct: 241 AMIEGYSKTHEHAKKSLEFYIDMQRLCFSPNISTFSSVIGACSVLAAFEAGQQIQCQLMK 300
Query: 301 TKFFTDIRMGSALLDMYSKCGRTEDARRVFDQMPERNVFSWTSMIDGYGKNGYPSEALEL 360
TKFFTDIRMGSAL+DMYSKCGRT+DAR+VFDQM ERNVFSWTSMIDGYGKNGYPSEALEL
Sbjct: 301 TKFFTDIRMGSALIDMYSKCGRTDDARQVFDQMQERNVFSWTSMIDGYGKNGYPSEALEL 360
Query: 361 FCIMQEEHQIQPNFVTFLSALSACAHGGLVEKGWEIFESMERDYLLKPKMEHYACMVDLL 420
FCIMQE+HQIQPNFVTFLSALSACAHGGLVE+GWEIFESMERDY LKPKMEHYACMVDLL
Sbjct: 361 FCIMQEKHQIQPNFVTFLSALSACAHGGLVEEGWEIFESMERDYSLKPKMEHYACMVDLL 420
Query: 421 GRAGRLLQAWEFIMQMPETPNSDIWAALLSSAKLHGNIEMACIAANELFKLNADSRPGAY 480
GRAG LLQAWEF MQMPETPNSD+WAALLSSAKLHGN+E+AC+AA+ELFKLNADSRPGAY
Sbjct: 421 GRAGSLLQAWEFAMQMPETPNSDVWAALLSSAKLHGNVEIACMAADELFKLNADSRPGAY 480
Query: 481 VALSNTFAEAGKWDNVTELRELMKIRRVKCKGSSWVGAGDGSL 524
VALSNTFAEAGKW+NV+ELRE+MKI+RVKCKGSSWVGAGDGSL
Sbjct: 481 VALSNTFAEAGKWNNVSELREIMKIKRVKCKGSSWVGAGDGSL 523
BLAST of Lsi02G007940 vs. ExPASy TrEMBL
Match:
A0A5A7UQW1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002130 PE=4 SV=1)
HSP 1 Score: 960.3 bits (2481), Expect = 3.3e-276
Identity = 471/523 (90.06%), Postives = 496/523 (94.84%), Query Frame = 0
Query: 1 MKNGRFQSVIHRIFSSLSEYAPSFAATQISNQTSTSLSSALQHYINSDDPSHGQKIHAHI 60
MKNGRF SV HR+FSSLS+Y PSFA Q SNQTSTSLSSALQHYINSDDPSHG KIHAHI
Sbjct: 1 MKNGRFTSVTHRVFSSLSDYVPSFAPIQTSNQTSTSLSSALQHYINSDDPSHGLKIHAHI 60
Query: 61 LKTGFIPNTNISIKLLILHLKCGSLKFARQVFDALPQKTLSAYNYMIGGYIKMGKVPESL 120
LKTGFIPNTNISIKLLILHLKC SLKFARQVFDALPQKTLSAYNYMIGGYIKMGKVPESL
Sbjct: 61 LKTGFIPNTNISIKLLILHLKCKSLKFARQVFDALPQKTLSAYNYMIGGYIKMGKVPESL 120
Query: 121 ALVRELISSGERPDGYTFSMLLKASTCAHGDSVPRSLGRVVHAQILKSDVSSDDVLYTTL 180
LVRELI SGE+PDG+TFSMLLKAST AH D +P SLGRVVHAQILKS+V DDVLYT L
Sbjct: 121 PLVRELIFSGEKPDGFTFSMLLKASTLAHEDFLPHSLGRVVHAQILKSNVPPDDVLYTAL 180
Query: 181 VDSYVKNGDIYFARMVFDLMLKKNVICSTSMISGYMNQGLVEDAEEIFSKTVEKDIVVFN 240
+DS +KNGDIYFARMVFDLMLKKNVICSTSMISGYMNQGLV DAEEIFSKTVEKDIVVFN
Sbjct: 181 IDSCIKNGDIYFARMVFDLMLKKNVICSTSMISGYMNQGLVNDAEEIFSKTVEKDIVVFN 240
Query: 241 AMVEGYSKTHEHAKKSLEVYIDMQRLCFSPNISTFSSVIGACSMLAAFEAGQQIQCQLMK 300
AM+EGYSKTHEHA+KS EVYIDMQRLCFSPNISTFSSVIGACS+LAA EAGQQIQCQLMK
Sbjct: 241 AMIEGYSKTHEHARKSFEVYIDMQRLCFSPNISTFSSVIGACSVLAALEAGQQIQCQLMK 300
Query: 301 TKFFTDIRMGSALLDMYSKCGRTEDARRVFDQMPERNVFSWTSMIDGYGKNGYPSEALEL 360
TKFFTDIRMGSAL+DMYSKCGRT+DAR+VFDQM ERNVFSWTSMIDGYGKNGYPSEAL+L
Sbjct: 301 TKFFTDIRMGSALIDMYSKCGRTDDARQVFDQMRERNVFSWTSMIDGYGKNGYPSEALKL 360
Query: 361 FCIMQEEHQIQPNFVTFLSALSACAHGGLVEKGWEIFESMERDYLLKPKMEHYACMVDLL 420
FCIMQE+HQIQPN VTFLSALSACAHGGLVE+GWEIFESMERDY LKPKMEHYACMVDLL
Sbjct: 361 FCIMQEKHQIQPNLVTFLSALSACAHGGLVEEGWEIFESMERDYSLKPKMEHYACMVDLL 420
Query: 421 GRAGRLLQAWEFIMQMPETPNSDIWAALLSSAKLHGNIEMACIAANELFKLNADSRPGAY 480
GRAG LLQAWEF+MQMPETPNSD+WAALLSSAKLHGN+EMAC AANELFKLNA+SRPGAY
Sbjct: 421 GRAGSLLQAWEFVMQMPETPNSDVWAALLSSAKLHGNVEMACTAANELFKLNANSRPGAY 480
Query: 481 VALSNTFAEAGKWDNVTELRELMKIRRVKCKGSSWVGAGDGSL 524
VALSNTFAEAGKW+NV+ELRE+MKI+RVKCKGSSW GAGDGSL
Sbjct: 481 VALSNTFAEAGKWNNVSELREIMKIKRVKCKGSSWFGAGDGSL 523
BLAST of Lsi02G007940 vs. ExPASy TrEMBL
Match:
A0A1S4DW82 (pentatricopeptide repeat-containing protein At1g28690, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103486768 PE=4 SV=1)
HSP 1 Score: 960.3 bits (2481), Expect = 3.3e-276
Identity = 471/523 (90.06%), Postives = 496/523 (94.84%), Query Frame = 0
Query: 1 MKNGRFQSVIHRIFSSLSEYAPSFAATQISNQTSTSLSSALQHYINSDDPSHGQKIHAHI 60
MKNGRF SV HR+FSSLS+Y PSFA Q SNQTSTSLSSALQHYINSDDPSHG KIHAHI
Sbjct: 1 MKNGRFTSVTHRVFSSLSDYVPSFAPIQTSNQTSTSLSSALQHYINSDDPSHGLKIHAHI 60
Query: 61 LKTGFIPNTNISIKLLILHLKCGSLKFARQVFDALPQKTLSAYNYMIGGYIKMGKVPESL 120
LKTGFIPNTNISIKLLILHLKC SLKFARQVFDALPQKTLSAYNYMIGGYIKMGKVPESL
Sbjct: 61 LKTGFIPNTNISIKLLILHLKCKSLKFARQVFDALPQKTLSAYNYMIGGYIKMGKVPESL 120
Query: 121 ALVRELISSGERPDGYTFSMLLKASTCAHGDSVPRSLGRVVHAQILKSDVSSDDVLYTTL 180
LVRELI SGE+PDG+TFSMLLKAST AH D +P SLGRVVHAQILKS+V DDVLYT L
Sbjct: 121 PLVRELIFSGEKPDGFTFSMLLKASTLAHEDFLPHSLGRVVHAQILKSNVPPDDVLYTAL 180
Query: 181 VDSYVKNGDIYFARMVFDLMLKKNVICSTSMISGYMNQGLVEDAEEIFSKTVEKDIVVFN 240
+DS +KNGDIYFARMVFDLMLKKNVICSTSMISGYMNQGLV DAEEIFSKTVEKDIVVFN
Sbjct: 181 IDSCIKNGDIYFARMVFDLMLKKNVICSTSMISGYMNQGLVNDAEEIFSKTVEKDIVVFN 240
Query: 241 AMVEGYSKTHEHAKKSLEVYIDMQRLCFSPNISTFSSVIGACSMLAAFEAGQQIQCQLMK 300
AM+EGYSKTHEHA+KS EVYIDMQRLCFSPNISTFSSVIGACS+LAA EAGQQIQCQLMK
Sbjct: 241 AMIEGYSKTHEHARKSFEVYIDMQRLCFSPNISTFSSVIGACSVLAALEAGQQIQCQLMK 300
Query: 301 TKFFTDIRMGSALLDMYSKCGRTEDARRVFDQMPERNVFSWTSMIDGYGKNGYPSEALEL 360
TKFFTDIRMGSAL+DMYSKCGRT+DAR+VFDQM ERNVFSWTSMIDGYGKNGYPSEAL+L
Sbjct: 301 TKFFTDIRMGSALIDMYSKCGRTDDARQVFDQMRERNVFSWTSMIDGYGKNGYPSEALKL 360
Query: 361 FCIMQEEHQIQPNFVTFLSALSACAHGGLVEKGWEIFESMERDYLLKPKMEHYACMVDLL 420
FCIMQE+HQIQPN VTFLSALSACAHGGLVE+GWEIFESMERDY LKPKMEHYACMVDLL
Sbjct: 361 FCIMQEKHQIQPNLVTFLSALSACAHGGLVEEGWEIFESMERDYSLKPKMEHYACMVDLL 420
Query: 421 GRAGRLLQAWEFIMQMPETPNSDIWAALLSSAKLHGNIEMACIAANELFKLNADSRPGAY 480
GRAG LLQAWEF+MQMPETPNSD+WAALLSSAKLHGN+EMAC AANELFKLNA+SRPGAY
Sbjct: 421 GRAGSLLQAWEFVMQMPETPNSDVWAALLSSAKLHGNVEMACTAANELFKLNANSRPGAY 480
Query: 481 VALSNTFAEAGKWDNVTELRELMKIRRVKCKGSSWVGAGDGSL 524
VALSNTFAEAGKW+NV+ELRE+MKI+RVKCKGSSW GAGDGSL
Sbjct: 481 VALSNTFAEAGKWNNVSELREIMKIKRVKCKGSSWFGAGDGSL 523
BLAST of Lsi02G007940 vs. ExPASy TrEMBL
Match:
A0A6J1K506 (pentatricopeptide repeat-containing protein At1g28690, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111490117 PE=4 SV=1)
HSP 1 Score: 924.9 bits (2389), Expect = 1.5e-265
Identity = 458/523 (87.57%), Postives = 489/523 (93.50%), Query Frame = 0
Query: 1 MKNGRFQSVIHRIFSSLSEYAPSFAATQISNQTSTSLSSALQHYINSDDPSHGQKIHAHI 60
MKNGRFQ++ RIFSSLS+ PS ATQ SNQTST L+SALQHYINSDDPS GQK+H+HI
Sbjct: 1 MKNGRFQAITRRIFSSLSDSLPSATATQTSNQTSTILASALQHYINSDDPSPGQKLHSHI 60
Query: 61 LKTGFIPNTNISIKLLILHLKCGSLKFARQVFDALPQKTLSAYNYMIGGYIKMGKVPESL 120
LK+GFIPNT+ISIKLLILHLKC SLK+ARQ FD LPQKTLSAYNYMI GYIK+GKV E+
Sbjct: 61 LKSGFIPNTSISIKLLILHLKCNSLKYARQAFDELPQKTLSAYNYMISGYIKVGKVAEAF 120
Query: 121 ALVRELISSGERPDGYTFSMLLKASTCAHGDSVPRSLGRVVHAQILKSDVSSDDVLYTTL 180
+LVRELI SGER DGYTFSM+LKASTCA DSV R LGRVVHAQILKSDVS DDVLYT L
Sbjct: 121 SLVRELIISGERLDGYTFSMILKASTCARNDSVLRCLGRVVHAQILKSDVSPDDVLYTAL 180
Query: 181 VDSYVKNGDIYFARMVFDLMLKKNVICSTSMISGYMNQGLVEDAEEIFSKTVEKDIVVFN 240
+DSYVKNGD+YFAR+VFD+ML+ NVICSTSMISGYMNQGLV+DAEEIF KTVEKDIVVFN
Sbjct: 181 IDSYVKNGDVYFARIVFDMMLQNNVICSTSMISGYMNQGLVQDAEEIFMKTVEKDIVVFN 240
Query: 241 AMVEGYSKTHEHAKKSLEVYIDMQRLCFSPNISTFSSVIGACSMLAAFEAGQQIQCQLMK 300
AM+EGYSKT EHAKKSLEVYIDMQRLCFSPNISTFSS IGACS+LAAFEAGQQIQCQLMK
Sbjct: 241 AMIEGYSKTLEHAKKSLEVYIDMQRLCFSPNISTFSSAIGACSVLAAFEAGQQIQCQLMK 300
Query: 301 TKFFTDIRMGSALLDMYSKCGRTEDARRVFDQMPERNVFSWTSMIDGYGKNGYPSEALEL 360
TKFFTDIRMGSAL+DM+SKCGRTE+ARRVFDQMPERNVFSWTSMIDGYGKNGYP+EAL L
Sbjct: 301 TKFFTDIRMGSALIDMHSKCGRTEEARRVFDQMPERNVFSWTSMIDGYGKNGYPNEALVL 360
Query: 361 FCIMQEEHQIQPNFVTFLSALSACAHGGLVEKGWEIFESMERDYLLKPKMEHYACMVDLL 420
FCIMQE+HQIQPNFVTFLSALSACAHGGLVEKG EIFESMERDY LKPK+EHYACMVDLL
Sbjct: 361 FCIMQEKHQIQPNFVTFLSALSACAHGGLVEKGQEIFESMERDYSLKPKLEHYACMVDLL 420
Query: 421 GRAGRLLQAWEFIMQMPETPNSDIWAALLSSAKLHGNIEMACIAANELFKLNADSRPGAY 480
GRAG L QAWEFIMQMPE PNSD+WAALLSSAKLHGNIEMACIAANELFKLNADSRPGAY
Sbjct: 421 GRAGSLHQAWEFIMQMPEPPNSDVWAALLSSAKLHGNIEMACIAANELFKLNADSRPGAY 480
Query: 481 VALSNTFAEAGKWDNVTELRELMKIRRVKCKGSSWVGAGDGSL 524
VALSNTFAEAGKWDNV+ELRE+MK+RRVKCKGSSWVGA DGSL
Sbjct: 481 VALSNTFAEAGKWDNVSELREVMKMRRVKCKGSSWVGA-DGSL 522
BLAST of Lsi02G007940 vs. ExPASy TrEMBL
Match:
A0A6J1GUP8 (pentatricopeptide repeat-containing protein At1g28690, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111457097 PE=4 SV=1)
HSP 1 Score: 922.5 bits (2383), Expect = 7.6e-265
Identity = 457/523 (87.38%), Postives = 489/523 (93.50%), Query Frame = 0
Query: 1 MKNGRFQSVIHRIFSSLSEYAPSFAATQISNQTSTSLSSALQHYINSDDPSHGQKIHAHI 60
MK GRFQ++ RIFSSLS+ PS +TQ SNQTST L+SALQHYINSDDPS GQK+H+HI
Sbjct: 1 MKKGRFQAITRRIFSSLSDSLPSATSTQTSNQTSTILASALQHYINSDDPSPGQKLHSHI 60
Query: 61 LKTGFIPNTNISIKLLILHLKCGSLKFARQVFDALPQKTLSAYNYMIGGYIKMGKVPESL 120
LK+GFIPNT+ISIKLLILHLKC SLK+ARQVFD LPQKTLSAYNYMI GYIK+GKV ES
Sbjct: 61 LKSGFIPNTSISIKLLILHLKCNSLKYARQVFDELPQKTLSAYNYMISGYIKVGKVAESF 120
Query: 121 ALVRELISSGERPDGYTFSMLLKASTCAHGDSVPRSLGRVVHAQILKSDVSSDDVLYTTL 180
+LVRELI SGER DGYTFSM+LKASTC+ DSV LGRVVHAQILKSDVS DDVLYT L
Sbjct: 121 SLVRELIISGERLDGYTFSMILKASTCSRDDSVLSCLGRVVHAQILKSDVSPDDVLYTAL 180
Query: 181 VDSYVKNGDIYFARMVFDLMLKKNVICSTSMISGYMNQGLVEDAEEIFSKTVEKDIVVFN 240
+DSYVKNGD+YFAR+VFD+ML+ NVICSTSMISGYMNQGLV+DAEEIF KTVEKDIVVFN
Sbjct: 181 IDSYVKNGDVYFARIVFDMMLQNNVICSTSMISGYMNQGLVQDAEEIFMKTVEKDIVVFN 240
Query: 241 AMVEGYSKTHEHAKKSLEVYIDMQRLCFSPNISTFSSVIGACSMLAAFEAGQQIQCQLMK 300
AM+EGYSKT EHAKKSLEVYIDMQRLCFSPNISTFSSVIGACS+LAAFEAGQQIQCQLMK
Sbjct: 241 AMIEGYSKTLEHAKKSLEVYIDMQRLCFSPNISTFSSVIGACSVLAAFEAGQQIQCQLMK 300
Query: 301 TKFFTDIRMGSALLDMYSKCGRTEDARRVFDQMPERNVFSWTSMIDGYGKNGYPSEALEL 360
TKFF DIRMGSAL+DM+SKCGRTEDARRVFDQMPERNVFSWTSMIDGYGKNGYP+EALEL
Sbjct: 301 TKFFRDIRMGSALIDMHSKCGRTEDARRVFDQMPERNVFSWTSMIDGYGKNGYPNEALEL 360
Query: 361 FCIMQEEHQIQPNFVTFLSALSACAHGGLVEKGWEIFESMERDYLLKPKMEHYACMVDLL 420
FCIMQE+HQIQPNFVTFLSALSACAHGGLVEKG EIFESMERDY LKPK+EHYACMVDLL
Sbjct: 361 FCIMQEKHQIQPNFVTFLSALSACAHGGLVEKGQEIFESMERDYSLKPKLEHYACMVDLL 420
Query: 421 GRAGRLLQAWEFIMQMPETPNSDIWAALLSSAKLHGNIEMACIAANELFKLNADSRPGAY 480
GRAG L QAWEFIMQMPE PNSD+WAALLSSAKLHGNIEMACIAANE+FKLNADSRPGAY
Sbjct: 421 GRAGSLHQAWEFIMQMPEPPNSDVWAALLSSAKLHGNIEMACIAANEVFKLNADSRPGAY 480
Query: 481 VALSNTFAEAGKWDNVTELRELMKIRRVKCKGSSWVGAGDGSL 524
VALSNTFAEAGKWDNV+ELRE+MK+RRVKCKGSSWVGA DGSL
Sbjct: 481 VALSNTFAEAGKWDNVSELREVMKMRRVKCKGSSWVGA-DGSL 522
BLAST of Lsi02G007940 vs. NCBI nr
Match:
XP_038895625.1 (pentatricopeptide repeat-containing protein At1g28690, mitochondrial [Benincasa hispida] >XP_038895626.1 pentatricopeptide repeat-containing protein At1g28690, mitochondrial [Benincasa hispida] >XP_038895627.1 pentatricopeptide repeat-containing protein At1g28690, mitochondrial [Benincasa hispida] >XP_038895628.1 pentatricopeptide repeat-containing protein At1g28690, mitochondrial [Benincasa hispida] >XP_038895630.1 pentatricopeptide repeat-containing protein At1g28690, mitochondrial [Benincasa hispida] >XP_038895631.1 pentatricopeptide repeat-containing protein At1g28690, mitochondrial [Benincasa hispida])
HSP 1 Score: 1004.2 bits (2595), Expect = 4.1e-289
Identity = 498/523 (95.22%), Postives = 508/523 (97.13%), Query Frame = 0
Query: 1 MKNGRFQSVIHRIFSSLSEYAPSFAATQISNQTSTSLSSALQHYINSDDPSHGQKIHAHI 60
MKNGRFQSV HR+FSSLS+Y PS AATQISNQT TSLSSALQHYINSDDPSHGQKIHAHI
Sbjct: 1 MKNGRFQSVTHRVFSSLSDYVPSIAATQISNQTFTSLSSALQHYINSDDPSHGQKIHAHI 60
Query: 61 LKTGFIPNTNISIKLLILHLKCGSLKFARQVFDALPQKTLSAYNYMIGGYIKMGKVPESL 120
LKTGFIPNTNISIKLLILHLKCGSLKFARQVFD LPQKTLSAYNYMIGGYIKMGKVPESL
Sbjct: 61 LKTGFIPNTNISIKLLILHLKCGSLKFARQVFDVLPQKTLSAYNYMIGGYIKMGKVPESL 120
Query: 121 ALVRELISSGERPDGYTFSMLLKASTCAHGDSVPRSLGRVVHAQILKSDVSSDDVLYTTL 180
ALVRELISSGERPDGYTFSMLLKASTCA GDSV RSLGRVVHAQILKSDVS DDVLYT L
Sbjct: 121 ALVRELISSGERPDGYTFSMLLKASTCARGDSVLRSLGRVVHAQILKSDVSPDDVLYTAL 180
Query: 181 VDSYVKNGDIYFARMVFDLMLKKNVICSTSMISGYMNQGLVEDAEEIFSKTVEKDIVVFN 240
VDSYVKNGDI FARMVFDLMLKKNVICSTSMISGYMNQGLVEDAEEIFSKTVEKDIVVFN
Sbjct: 181 VDSYVKNGDICFARMVFDLMLKKNVICSTSMISGYMNQGLVEDAEEIFSKTVEKDIVVFN 240
Query: 241 AMVEGYSKTHEHAKKSLEVYIDMQRLCFSPNISTFSSVIGACSMLAAFEAGQQIQCQLMK 300
AMVEGYSKTHEHAKKSLEVYIDMQRLCFSPNISTFSSVIGACSMLAAFEAGQQIQCQLMK
Sbjct: 241 AMVEGYSKTHEHAKKSLEVYIDMQRLCFSPNISTFSSVIGACSMLAAFEAGQQIQCQLMK 300
Query: 301 TKFFTDIRMGSALLDMYSKCGRTEDARRVFDQMPERNVFSWTSMIDGYGKNGYPSEALEL 360
TKFFTDIRMGSALLDMYSKCGRTEDARRVFDQMPERN+FSWTSMIDGYGKNGYPSEAL L
Sbjct: 301 TKFFTDIRMGSALLDMYSKCGRTEDARRVFDQMPERNIFSWTSMIDGYGKNGYPSEALNL 360
Query: 361 FCIMQEEHQIQPNFVTFLSALSACAHGGLVEKGWEIFESMERDYLLKPKMEHYACMVDLL 420
FCIMQEEHQIQPNFVTFLSALSACAHGGLVE+GWEIFESMERDY LKPKMEHYACMVDLL
Sbjct: 361 FCIMQEEHQIQPNFVTFLSALSACAHGGLVERGWEIFESMERDYSLKPKMEHYACMVDLL 420
Query: 421 GRAGRLLQAWEFIMQMPETPNSDIWAALLSSAKLHGNIEMACIAANELFKLNADSRPGAY 480
GRAG LLQAWEFIM+MPETPNSD+WAALLSSAKLHGNIEMACIAANELFKL+A+SRPGAY
Sbjct: 421 GRAGSLLQAWEFIMRMPETPNSDVWAALLSSAKLHGNIEMACIAANELFKLSANSRPGAY 480
Query: 481 VALSNTFAEAGKWDNVTELRELMKIRRVKCKGSSWVGAGDGSL 524
VALSNTFAEAGKWDNV+ELRE+MKIRRVKCKGSSWVGA DG L
Sbjct: 481 VALSNTFAEAGKWDNVSELREIMKIRRVKCKGSSWVGAADGIL 523
BLAST of Lsi02G007940 vs. NCBI nr
Match:
XP_004149063.1 (pentatricopeptide repeat-containing protein At1g28690, mitochondrial [Cucumis sativus] >XP_011657846.1 pentatricopeptide repeat-containing protein At1g28690, mitochondrial [Cucumis sativus])
HSP 1 Score: 961.4 bits (2484), Expect = 3.1e-276
Identity = 471/523 (90.06%), Postives = 499/523 (95.41%), Query Frame = 0
Query: 1 MKNGRFQSVIHRIFSSLSEYAPSFAATQISNQTSTSLSSALQHYINSDDPSHGQKIHAHI 60
MKN RF+SV HR+FSSL +Y PSFA TQ SNQTSTSLSSALQHYINSDDPSHG KIHAHI
Sbjct: 1 MKNDRFKSVTHRVFSSLIDYVPSFAPTQTSNQTSTSLSSALQHYINSDDPSHGLKIHAHI 60
Query: 61 LKTGFIPNTNISIKLLILHLKCGSLKFARQVFDALPQKTLSAYNYMIGGYIKMGKVPESL 120
LKTGFIPNTNISIKLLILHLKC SLKFARQ FDALPQKTLSAYNYMIGGY+KMG+VPESL
Sbjct: 61 LKTGFIPNTNISIKLLILHLKCKSLKFARQAFDALPQKTLSAYNYMIGGYMKMGEVPESL 120
Query: 121 ALVRELISSGERPDGYTFSMLLKASTCAHGDSVPRSLGRVVHAQILKSDVSSDDVLYTTL 180
LVRELI SGE+PDG+TFSMLLKAST A D VPRSLGRVVHAQILKS+VS DDVLYT L
Sbjct: 121 PLVRELICSGEKPDGFTFSMLLKASTLAREDFVPRSLGRVVHAQILKSNVSPDDVLYTAL 180
Query: 181 VDSYVKNGDIYFARMVFDLMLKKNVICSTSMISGYMNQGLVEDAEEIFSKTVEKDIVVFN 240
VDSY+KNGD+Y ARMVFDLMLKKNVICSTSMISGYMN+GLV+DAEEIF KTVEKDIVVFN
Sbjct: 181 VDSYIKNGDVYIARMVFDLMLKKNVICSTSMISGYMNRGLVKDAEEIFRKTVEKDIVVFN 240
Query: 241 AMVEGYSKTHEHAKKSLEVYIDMQRLCFSPNISTFSSVIGACSMLAAFEAGQQIQCQLMK 300
AM+EGYSKTHEHAKKSLE YIDMQRLCFSPNISTFSSVIGACS+LAAFEAGQQIQCQLMK
Sbjct: 241 AMIEGYSKTHEHAKKSLEFYIDMQRLCFSPNISTFSSVIGACSVLAAFEAGQQIQCQLMK 300
Query: 301 TKFFTDIRMGSALLDMYSKCGRTEDARRVFDQMPERNVFSWTSMIDGYGKNGYPSEALEL 360
TKFFTDIRMGSAL+DMYSKCGRT+DAR+VFDQM ERNVFSWTSMIDGYGKNGYPSEALEL
Sbjct: 301 TKFFTDIRMGSALIDMYSKCGRTDDARQVFDQMQERNVFSWTSMIDGYGKNGYPSEALEL 360
Query: 361 FCIMQEEHQIQPNFVTFLSALSACAHGGLVEKGWEIFESMERDYLLKPKMEHYACMVDLL 420
FCIMQE+HQIQPNFVTFLSALSACAHGGLVE+GWEIFESMERDY LKPKMEHYACMVDLL
Sbjct: 361 FCIMQEKHQIQPNFVTFLSALSACAHGGLVEEGWEIFESMERDYSLKPKMEHYACMVDLL 420
Query: 421 GRAGRLLQAWEFIMQMPETPNSDIWAALLSSAKLHGNIEMACIAANELFKLNADSRPGAY 480
GRAG LLQAWEF MQMPETPNSD+WAALLSSAKLHGN+E+AC+AA+ELFKLNADSRPGAY
Sbjct: 421 GRAGSLLQAWEFAMQMPETPNSDVWAALLSSAKLHGNVEIACMAADELFKLNADSRPGAY 480
Query: 481 VALSNTFAEAGKWDNVTELRELMKIRRVKCKGSSWVGAGDGSL 524
VALSNTFAEAGKW+NV+ELRE+MKI+RVKCKGSSWVGAGDGSL
Sbjct: 481 VALSNTFAEAGKWNNVSELREIMKIKRVKCKGSSWVGAGDGSL 523
BLAST of Lsi02G007940 vs. NCBI nr
Match:
XP_016900228.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g28690, mitochondrial [Cucumis melo] >KAA0057027.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 960.3 bits (2481), Expect = 6.8e-276
Identity = 471/523 (90.06%), Postives = 496/523 (94.84%), Query Frame = 0
Query: 1 MKNGRFQSVIHRIFSSLSEYAPSFAATQISNQTSTSLSSALQHYINSDDPSHGQKIHAHI 60
MKNGRF SV HR+FSSLS+Y PSFA Q SNQTSTSLSSALQHYINSDDPSHG KIHAHI
Sbjct: 1 MKNGRFTSVTHRVFSSLSDYVPSFAPIQTSNQTSTSLSSALQHYINSDDPSHGLKIHAHI 60
Query: 61 LKTGFIPNTNISIKLLILHLKCGSLKFARQVFDALPQKTLSAYNYMIGGYIKMGKVPESL 120
LKTGFIPNTNISIKLLILHLKC SLKFARQVFDALPQKTLSAYNYMIGGYIKMGKVPESL
Sbjct: 61 LKTGFIPNTNISIKLLILHLKCKSLKFARQVFDALPQKTLSAYNYMIGGYIKMGKVPESL 120
Query: 121 ALVRELISSGERPDGYTFSMLLKASTCAHGDSVPRSLGRVVHAQILKSDVSSDDVLYTTL 180
LVRELI SGE+PDG+TFSMLLKAST AH D +P SLGRVVHAQILKS+V DDVLYT L
Sbjct: 121 PLVRELIFSGEKPDGFTFSMLLKASTLAHEDFLPHSLGRVVHAQILKSNVPPDDVLYTAL 180
Query: 181 VDSYVKNGDIYFARMVFDLMLKKNVICSTSMISGYMNQGLVEDAEEIFSKTVEKDIVVFN 240
+DS +KNGDIYFARMVFDLMLKKNVICSTSMISGYMNQGLV DAEEIFSKTVEKDIVVFN
Sbjct: 181 IDSCIKNGDIYFARMVFDLMLKKNVICSTSMISGYMNQGLVNDAEEIFSKTVEKDIVVFN 240
Query: 241 AMVEGYSKTHEHAKKSLEVYIDMQRLCFSPNISTFSSVIGACSMLAAFEAGQQIQCQLMK 300
AM+EGYSKTHEHA+KS EVYIDMQRLCFSPNISTFSSVIGACS+LAA EAGQQIQCQLMK
Sbjct: 241 AMIEGYSKTHEHARKSFEVYIDMQRLCFSPNISTFSSVIGACSVLAALEAGQQIQCQLMK 300
Query: 301 TKFFTDIRMGSALLDMYSKCGRTEDARRVFDQMPERNVFSWTSMIDGYGKNGYPSEALEL 360
TKFFTDIRMGSAL+DMYSKCGRT+DAR+VFDQM ERNVFSWTSMIDGYGKNGYPSEAL+L
Sbjct: 301 TKFFTDIRMGSALIDMYSKCGRTDDARQVFDQMRERNVFSWTSMIDGYGKNGYPSEALKL 360
Query: 361 FCIMQEEHQIQPNFVTFLSALSACAHGGLVEKGWEIFESMERDYLLKPKMEHYACMVDLL 420
FCIMQE+HQIQPN VTFLSALSACAHGGLVE+GWEIFESMERDY LKPKMEHYACMVDLL
Sbjct: 361 FCIMQEKHQIQPNLVTFLSALSACAHGGLVEEGWEIFESMERDYSLKPKMEHYACMVDLL 420
Query: 421 GRAGRLLQAWEFIMQMPETPNSDIWAALLSSAKLHGNIEMACIAANELFKLNADSRPGAY 480
GRAG LLQAWEF+MQMPETPNSD+WAALLSSAKLHGN+EMAC AANELFKLNA+SRPGAY
Sbjct: 421 GRAGSLLQAWEFVMQMPETPNSDVWAALLSSAKLHGNVEMACTAANELFKLNANSRPGAY 480
Query: 481 VALSNTFAEAGKWDNVTELRELMKIRRVKCKGSSWVGAGDGSL 524
VALSNTFAEAGKW+NV+ELRE+MKI+RVKCKGSSW GAGDGSL
Sbjct: 481 VALSNTFAEAGKWNNVSELREIMKIKRVKCKGSSWFGAGDGSL 523
BLAST of Lsi02G007940 vs. NCBI nr
Match:
XP_023541225.1 (pentatricopeptide repeat-containing protein At1g28690, mitochondrial [Cucurbita pepo subsp. pepo])
HSP 1 Score: 932.9 bits (2410), Expect = 1.2e-267
Identity = 463/523 (88.53%), Postives = 492/523 (94.07%), Query Frame = 0
Query: 1 MKNGRFQSVIHRIFSSLSEYAPSFAATQISNQTSTSLSSALQHYINSDDPSHGQKIHAHI 60
MKNGRFQ + RIFSSLS+ PS AATQ SNQTST L+SALQHYINSDDPS GQK+H+HI
Sbjct: 1 MKNGRFQPITRRIFSSLSDSLPSAAATQTSNQTSTILASALQHYINSDDPSPGQKLHSHI 60
Query: 61 LKTGFIPNTNISIKLLILHLKCGSLKFARQVFDALPQKTLSAYNYMIGGYIKMGKVPESL 120
LK+GFIPNT+ISIKLLILHLKC SLK+ARQVFD LPQKTLSAYNYMI GYIK+GKV ES
Sbjct: 61 LKSGFIPNTSISIKLLILHLKCNSLKYARQVFDELPQKTLSAYNYMISGYIKVGKVAESF 120
Query: 121 ALVRELISSGERPDGYTFSMLLKASTCAHGDSVPRSLGRVVHAQILKSDVSSDDVLYTTL 180
+LVRELI SGER DGYTFSM+LKASTCA DSV R LGRVVHAQILKSDVS DDVLYT L
Sbjct: 121 SLVRELIISGERLDGYTFSMILKASTCARNDSVLRCLGRVVHAQILKSDVSPDDVLYTAL 180
Query: 181 VDSYVKNGDIYFARMVFDLMLKKNVICSTSMISGYMNQGLVEDAEEIFSKTVEKDIVVFN 240
+DSYVKNGD+YFAR+VFD+ML+ NVICSTSMISGYMNQGLV+DAEEIF KTVEKDIVVFN
Sbjct: 181 IDSYVKNGDVYFARIVFDMMLQNNVICSTSMISGYMNQGLVQDAEEIFMKTVEKDIVVFN 240
Query: 241 AMVEGYSKTHEHAKKSLEVYIDMQRLCFSPNISTFSSVIGACSMLAAFEAGQQIQCQLMK 300
AM+EGYSKT EHAKKSLEVYIDMQRLCFSPNISTFSSVIGACS+LAAFEAGQQIQCQLMK
Sbjct: 241 AMIEGYSKTLEHAKKSLEVYIDMQRLCFSPNISTFSSVIGACSVLAAFEAGQQIQCQLMK 300
Query: 301 TKFFTDIRMGSALLDMYSKCGRTEDARRVFDQMPERNVFSWTSMIDGYGKNGYPSEALEL 360
TKFFTDIRMGSAL+DM+SKCGRTEDARRVFDQMPERNVFSWTSMIDGYGKNGYP+EALEL
Sbjct: 301 TKFFTDIRMGSALIDMHSKCGRTEDARRVFDQMPERNVFSWTSMIDGYGKNGYPNEALEL 360
Query: 361 FCIMQEEHQIQPNFVTFLSALSACAHGGLVEKGWEIFESMERDYLLKPKMEHYACMVDLL 420
FCIMQE+HQIQPNFVTFLSALSACAHGGLVEKG +IFESMERDY LKPK+EHYACMVDLL
Sbjct: 361 FCIMQEKHQIQPNFVTFLSALSACAHGGLVEKGQDIFESMERDYSLKPKLEHYACMVDLL 420
Query: 421 GRAGRLLQAWEFIMQMPETPNSDIWAALLSSAKLHGNIEMACIAANELFKLNADSRPGAY 480
GRAG L QAWEFIMQMPE PNSD+WAALLSSAKLHGNIEMACIAANELFKLNADSRPGAY
Sbjct: 421 GRAGSLHQAWEFIMQMPEPPNSDVWAALLSSAKLHGNIEMACIAANELFKLNADSRPGAY 480
Query: 481 VALSNTFAEAGKWDNVTELRELMKIRRVKCKGSSWVGAGDGSL 524
VALSNTFAEAGKWDNV+ELRE+MK+RRVKCKGSSWVGA DGSL
Sbjct: 481 VALSNTFAEAGKWDNVSELREVMKMRRVKCKGSSWVGA-DGSL 522
BLAST of Lsi02G007940 vs. NCBI nr
Match:
KAG6573296.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 925.6 bits (2391), Expect = 1.9e-265
Identity = 459/523 (87.76%), Postives = 490/523 (93.69%), Query Frame = 0
Query: 1 MKNGRFQSVIHRIFSSLSEYAPSFAATQISNQTSTSLSSALQHYINSDDPSHGQKIHAHI 60
MK GRFQ++ RIFSSLS+ PS ATQ SNQTS L+SALQHYINSDDPS GQK+H+HI
Sbjct: 1 MKKGRFQAITRRIFSSLSDSLPSATATQTSNQTSIILASALQHYINSDDPSPGQKLHSHI 60
Query: 61 LKTGFIPNTNISIKLLILHLKCGSLKFARQVFDALPQKTLSAYNYMIGGYIKMGKVPESL 120
LK+GFIPNT+ISIKLLILHLKC SLK+ARQVFD LPQKTLSAYNYMI GYIK+GKV ES
Sbjct: 61 LKSGFIPNTSISIKLLILHLKCNSLKYARQVFDELPQKTLSAYNYMISGYIKVGKVAESF 120
Query: 121 ALVRELISSGERPDGYTFSMLLKASTCAHGDSVPRSLGRVVHAQILKSDVSSDDVLYTTL 180
+LVRELI SGER DGYTFSM+LKASTC+ DSV R LGRVVHAQILKSDVS DDVLYT L
Sbjct: 121 SLVRELIISGERLDGYTFSMILKASTCSRDDSVLRCLGRVVHAQILKSDVSPDDVLYTAL 180
Query: 181 VDSYVKNGDIYFARMVFDLMLKKNVICSTSMISGYMNQGLVEDAEEIFSKTVEKDIVVFN 240
+DSYVKNGD+YFAR+VFD+ML+ NVICSTSMISGYMNQGLV+DAEEIF KTVEKDIVVFN
Sbjct: 181 IDSYVKNGDVYFARIVFDMMLQNNVICSTSMISGYMNQGLVQDAEEIFMKTVEKDIVVFN 240
Query: 241 AMVEGYSKTHEHAKKSLEVYIDMQRLCFSPNISTFSSVIGACSMLAAFEAGQQIQCQLMK 300
AM+EGYSKT EHAKKSLEVYIDMQRLCFSPNISTFSSVIGACS+LAAFEAGQQIQCQLMK
Sbjct: 241 AMIEGYSKTLEHAKKSLEVYIDMQRLCFSPNISTFSSVIGACSVLAAFEAGQQIQCQLMK 300
Query: 301 TKFFTDIRMGSALLDMYSKCGRTEDARRVFDQMPERNVFSWTSMIDGYGKNGYPSEALEL 360
TKFFTDIRMGSAL+DM+SKCGRTEDARRVFDQMPERNVFSWTSMIDGYGKNGYP+EALEL
Sbjct: 301 TKFFTDIRMGSALIDMHSKCGRTEDARRVFDQMPERNVFSWTSMIDGYGKNGYPNEALEL 360
Query: 361 FCIMQEEHQIQPNFVTFLSALSACAHGGLVEKGWEIFESMERDYLLKPKMEHYACMVDLL 420
FCIMQE+HQI+PNFVTFLSALSACAHGGLVEKG EIFESMERDY LKPK+EHYACMVDLL
Sbjct: 361 FCIMQEKHQIKPNFVTFLSALSACAHGGLVEKGQEIFESMERDYSLKPKLEHYACMVDLL 420
Query: 421 GRAGRLLQAWEFIMQMPETPNSDIWAALLSSAKLHGNIEMACIAANELFKLNADSRPGAY 480
GRAG L QAWEFIMQMPE PNSD+WAALLSSAKLHGNIEMACIAANELFKLNADSRPGAY
Sbjct: 421 GRAGSLHQAWEFIMQMPEPPNSDVWAALLSSAKLHGNIEMACIAANELFKLNADSRPGAY 480
Query: 481 VALSNTFAEAGKWDNVTELRELMKIRRVKCKGSSWVGAGDGSL 524
VALSNTFAEAGKWDNV+ELRE+MK+RRVKCKGSSWVGA DGSL
Sbjct: 481 VALSNTFAEAGKWDNVSELREVMKMRRVKCKGSSWVGA-DGSL 522
BLAST of Lsi02G007940 vs. TAIR 10
Match:
AT1G28690.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 635.6 bits (1638), Expect = 3.6e-182
Identity = 327/518 (63.13%), Postives = 401/518 (77.41%), Query Frame = 0
Query: 1 MKNGRFQSVIHRIFSSLSEYAPSFAATQISNQTSTS-LSSALQHYINSDDPSHGQKIHAH 60
M+ RF S+ RI S + Y+ +S+ + ++ ALQ +INS P G+KIHA
Sbjct: 1 MRIFRFTSISPRILPS-NHYSTFPLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHAD 60
Query: 61 ILKTGFIPNTNISIKLLILHLKCGSLKFARQVFDALPQKTLSAYNYMIGGYIKMGKVPES 120
I+KTGF P+ NISIKLLILHLKCG L +ARQVFD LP+ TLSAYNYMI GY+K G V E
Sbjct: 61 IIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKEL 120
Query: 121 LALVRELISSGERPDGYTFSMLLKASTCAHGDSV-PRSLGRVVHAQILKSDVSSDDVLYT 180
L LV+ + SGE+ DGYT SM+LKAS + PRSL R+VHA+I+K DV DDVL T
Sbjct: 121 LLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLIT 180
Query: 181 TLVDSYVKNGDIYFARMVFDLMLKKNVICSTSMISGYMNQGLVEDAEEIFSKTVEKDIVV 240
LVD+YVK+G + AR VF+ M +NV+C TSMISGYMNQG VEDAEEIF+ T KDIVV
Sbjct: 181 ALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVV 240
Query: 241 FNAMVEGYSKTHEHAKKSLEVYIDMQRLCFSPNISTFSSVIGACSMLAAFEAGQQIQCQL 300
+NAMVEG+S++ E AK+S+++YI MQR F PNISTF+SVIGACS+L + E GQQ+ Q+
Sbjct: 241 YNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQI 300
Query: 301 MKTKFFTDIRMGSALLDMYSKCGRTEDARRVFDQMPERNVFSWTSMIDGYGKNGYPSEAL 360
MK+ +T I+MGS+LLDMY+KCG DARRVFDQM E+NVFSWTSMIDGYGKNG P EAL
Sbjct: 301 MKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEAL 360
Query: 361 ELFCIMQEEHQIQPNFVTFLSALSACAHGGLVEKGWEIFESMERDYLLKPKMEHYACMVD 420
ELF M +E +I+PN+VTFL ALSAC+H GLV+KG+EIFESM+RDY +KPKMEHYAC+VD
Sbjct: 361 ELFTRM-KEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVD 420
Query: 421 LLGRAGRLLQAWEFIMQMPETPNSDIWAALLSSAKLHGNIEMACIAANELFKLNADSRPG 480
L+GRAG L +A+EF MPE P+SDIWAALLSS LHGN+E+A IAA+ELFKLNAD RPG
Sbjct: 421 LMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPG 480
Query: 481 AYVALSNTFAEAGKWDNVTELRELMKIRRV-KCKGSSW 516
AY+ALSN +A KWDNV+++RE+MK RR+ K G SW
Sbjct: 481 AYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSW 516
BLAST of Lsi02G007940 vs. TAIR 10
Match:
AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 309.7 bits (792), Expect = 4.5e-84
Identity = 177/489 (36.20%), Postives = 287/489 (58.69%), Query Frame = 0
Query: 36 SLSSALQHYINSDDPSHGQKIHAHILKTGFIPNTNISIKLLILHLKCGSLKFARQVFDAL 95
S +S L +D + G ++H+ I K+ F+ + I L+ ++ KCG++ A++VFD +
Sbjct: 154 SFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEM 213
Query: 96 PQKTLSAYNYMIGGYIKMGKVPESLALVRELISSGERPDGYTFSMLLKASTCAHGDSVPR 155
+ + ++N +I + + G E+L + + ++ S PD T + ++ S CA ++
Sbjct: 214 GDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVI--SACASLSAI-- 273
Query: 156 SLGRVVHAQILKSD-VSSDDVLYTTLVDSYVKNGDIYFARMVFDLMLKKNVICSTSMISG 215
+G+ VH +++K+D + +D +L VD Y K I AR +FD M +NVI TSMISG
Sbjct: 274 KVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISG 333
Query: 216 YMNQGLVEDAEEIFSKTVEKDIVVFNAMVEGYSKTHEHAKKSLEVYIDMQRLCFSPNIST 275
Y + A +F+K E+++V +NA++ GY++ E+ +++L ++ ++R P +
Sbjct: 334 YAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGEN-EEALSLFCLLKRESVCPTHYS 393
Query: 276 FSSVIGACSMLAAFEAGQQIQCQLMKTKF------FTDIRMGSALLDMYSKCGRTEDARR 335
F++++ AC+ LA G Q ++K F DI +G++L+DMY KCG E+
Sbjct: 394 FANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYL 453
Query: 336 VFDQMPERNVFSWTSMIDGYGKNGYPSEALELFCIMQEEHQIQPNFVTFLSALSACAHGG 395
VF +M ER+ SW +MI G+ +NGY +EALELF M E + +P+ +T + LSAC H G
Sbjct: 454 VFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGE-KPDHITMIGVLSACGHAG 513
Query: 396 LVEKGWEIFESMERDYLLKPKMEHYACMVDLLGRAGRLLQAWEFIMQMPETPNSDIWAAL 455
VE+G F SM RD+ + P +HY CMVDLLGRAG L +A I +MP P+S IW +L
Sbjct: 514 FVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSL 573
Query: 456 LSSAKLHGNIEMACIAANELFKLNADSRPGAYVALSNTFAEAGKWDNVTELRELMKIRRV 515
L++ K+H NI + A +L ++ S G YV LSN +AE GKW++V +R+ M+ V
Sbjct: 574 LAACKVHRNITLGKYVAEKLLEVE-PSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGV 633
Query: 516 -KCKGSSWV 517
K G SW+
Sbjct: 634 TKQPGCSWI 635
BLAST of Lsi02G007940 vs. TAIR 10
Match:
AT3G13770.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 300.8 bits (769), Expect = 2.1e-81
Identity = 161/466 (34.55%), Postives = 269/466 (57.73%), Query Frame = 0
Query: 53 GQKIHAHILKTGFIPNTNISIKLLILHLKCGSLKFARQVFDALPQKTLSAYNYMIGGYIK 112
GQ++HAH++KT ++P T + +LLI + KC L+ AR+V D +P+K + ++ MI Y +
Sbjct: 71 GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQ 130
Query: 113 MGKVPESLALVRELISSGERPDGYTFSMLLKASTCAHGDSVPRSLGRVVHAQILKSDVSS 172
G E+L + E++ S +P+ +TF+ +L + A G LG+ +H I+K + S
Sbjct: 131 TGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASG----LGLGKQIHGLIVKWNYDS 190
Query: 173 DDVLYTTLVDSYVKNGDIYFARMVFDLMLKKNVICSTSMISGYMNQGLVEDAEEIFSKTV 232
+ ++L+D Y K G I AR +F+ + +++V+ T++I+GY GL E+A E+F +
Sbjct: 191 HIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLH 250
Query: 233 EKDIVVFNAMVEGYSKTHEHAKKSLEVYIDMQRLCFSPNISTFSSVIGACSMLAAFEAGQ 292
+ + SPN T++S++ A S LA + G+
Sbjct: 251 SEGM--------------------------------SPNYVTYASLLTALSGLALLDHGK 310
Query: 293 QIQCQLMKTKFFTDIRMGSALLDMYSKCGRTEDARRVFDQMPERNVFSWTSMIDGYGKNG 352
Q C +++ + + ++L+DMYSKCG ARR+FD MPER SW +M+ GY K+G
Sbjct: 311 QAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHG 370
Query: 353 YPSEALELFCIMQEEHQIQPNFVTFLSALSACAHGGLVEKGWEIFESM-ERDYLLKPKME 412
E LELF +M++E +++P+ VT L+ LS C+HG + + G IF+ M +Y KP E
Sbjct: 371 LGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTE 430
Query: 413 HYACMVDLLGRAGRLLQAWEFIMQMPETPNSDIWAALLSSAKLHGNIEMACIAANELFKL 472
HY C+VD+LGRAGR+ +A+EFI +MP P + + +LL + ++H ++++ L ++
Sbjct: 431 HYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEI 490
Query: 473 NADSRPGAYVALSNTFAEAGKWDNVTELRELMKIRRV-KCKGSSWV 517
++ G YV LSN +A AG+W +V +R +M + V K G SW+
Sbjct: 491 EPEN-AGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWI 499
BLAST of Lsi02G007940 vs. TAIR 10
Match:
AT5G08510.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 296.6 bits (758), Expect = 4.0e-80
Identity = 167/453 (36.87%), Postives = 266/453 (58.72%), Query Frame = 0
Query: 54 QKIHAHILKTGFIPNTNISIKLLILHLKCGSLKFARQVFDALPQKTLSAYNYMIGGYIKM 113
+++HAH L+TG ++ +LL++ +L +AR++FD YN +I Y
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLLLI----PNLVYARKLFDHHQNSCTFLYNKLIQAYYVH 64
Query: 114 GKVPESLALVRELISSGERPDGYTFSMLLKASTCAHGDSVPRSLGRVVHAQILKSDVSSD 173
+ ES+ L L G RP +TF+ + AS S R L R++H+Q +S SD
Sbjct: 65 HQPHESIVLYNLLSFDGLRPSHHTFNFIFAASA---SFSSARPL-RLLHSQFFRSGFESD 124
Query: 174 DVLYTTLVDSYVKNGDIYFARMVFDLMLKKNVICSTSMISGYMNQGLVEDAEEIFSKTVE 233
TTL+ +Y K G + AR VFD M K++V +MI+GY +G ++ A E+F
Sbjct: 125 SFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPR 184
Query: 234 KDIVVFNAMVEGYSKTHEHAKKSLEVYIDMQR-LCFSPNISTFSSVIGACSMLAAFEAGQ 293
K++ + ++ G+S+ ++ ++L++++ M++ PN T SV+ AC+ L E G+
Sbjct: 185 KNVTSWTTVISGFSQNGNYS-EALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGR 244
Query: 294 QIQCQLMKTKFFTDIRMGSALLDMYSKCGRTEDARRVFDQM-PERNVFSWTSMIDGYGKN 353
+++ + FF +I + +A ++MYSKCG + A+R+F+++ +RN+ SW SMI +
Sbjct: 245 RLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATH 304
Query: 354 GYPSEALELFCIMQEEHQIQPNFVTFLSALSACAHGGLVEKGWEIFESMERDYLLKPKME 413
G EAL LF M E + +P+ VTF+ L AC HGG+V KG E+F+SME + + PK+E
Sbjct: 305 GKHDEALTLFAQMLREGE-KPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLE 364
Query: 414 HYACMVDLLGRAGRLLQAWEFIMQMPETPNSDIWAALLSSAKLHGNIEMACIAANELFKL 473
HY CM+DLLGR G+L +A++ I MP P++ +W LL + HGN+E+A IA+ LFKL
Sbjct: 365 HYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKL 424
Query: 474 NADSRPGAYVALSNTFAEAGKWDNVTELRELMK 505
+ PG V +SN +A KWD V +R+LMK
Sbjct: 425 E-PTNPGNCVIMSNIYAANEKWDGVLRMRKLMK 446
BLAST of Lsi02G007940 vs. TAIR 10
Match:
AT4G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 293.9 bits (751), Expect = 2.6e-79
Identity = 160/463 (34.56%), Postives = 261/463 (56.37%), Query Frame = 0
Query: 53 GQKIHAHILKTGFIPNTNISIKLLILHLKCGSLKFARQVFDALPQKTLSAYNYMIGGYIK 112
G ++H K + + + + ++ CG + +AR VFD + + + +N MI Y +
Sbjct: 130 GMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCR 189
Query: 113 MGKVPESLALVRELISSGERPDGYTFSMLLKASTCAHGDSVPRSLGRVVHAQILKSDVSS 172
G V E+ L E+ S PD M+L A G + R ++ ++++DV
Sbjct: 190 FGLVDEAFKLFEEMKDSNVMPD----EMILCNIVSACGRTGNMRYNRAIYEFLIENDVRM 249
Query: 173 DDVLYTTLVDSYVKNGDIYFARMVFDLMLKKNVICSTSMISGYMNQGLVEDAEEIFSKTV 232
D L T LV Y G + AR F M +N+ ST+M+SGY G ++DA+ IF +T
Sbjct: 250 DTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTE 309
Query: 233 EKDIVVFNAMVEGYSKTHEHAKKSLEVYIDMQRLCFSPNISTFSSVIGACSMLAAFEAGQ 292
+KD+V + M+ Y ++ ++ +++L V+ +M P++ + SVI AC+ L + +
Sbjct: 310 KKDLVCWTTMISAYVES-DYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAK 369
Query: 293 QIQCQLMKTKFFTDIRMGSALLDMYSKCGRTEDARRVFDQMPERNVFSWTSMIDGYGKNG 352
+ + +++ + +AL++MY+KCG + R VF++MP RNV SW+SMI+ +G
Sbjct: 370 WVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHG 429
Query: 353 YPSEALELFCIMQEEHQIQPNFVTFLSALSACAHGGLVEKGWEIFESMERDYLLKPKMEH 412
S+AL LF M++E+ ++PN VTF+ L C+H GLVE+G +IF SM +Y + PK+EH
Sbjct: 430 EASDALSLFARMKQEN-VEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEH 489
Query: 413 YACMVDLLGRAGRLLQAWEFIMQMPETPNSDIWAALLSSAKLHGNIEMACIAANELFKLN 472
Y CMVDL GRA L +A E I MP N IW +L+S+ ++HG +E+ AA + +L
Sbjct: 490 YGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELE 549
Query: 473 ADSRPGAYVALSNTFAEAGKWDNVTELRELMKIRRV-KCKGSS 515
D GA V +SN +A +W++V +R +M+ + V K KG S
Sbjct: 550 PD-HDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLS 585
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q1PFQ9 | 5.1e-181 | 63.13 | Pentatricopeptide repeat-containing protein At1g28690, mitochondrial OS=Arabidop... | [more] |
Q9SIT7 | 6.4e-83 | 36.20 | Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... | [more] |
Q9LIC3 | 3.0e-80 | 34.55 | Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS... | [more] |
Q9FNN7 | 5.6e-79 | 36.87 | Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana OX... | [more] |
O23337 | 3.6e-78 | 34.56 | Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LX92 | 1.5e-276 | 90.06 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G478080 PE=4 SV=1 | [more] |
A0A5A7UQW1 | 3.3e-276 | 90.06 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S4DW82 | 3.3e-276 | 90.06 | pentatricopeptide repeat-containing protein At1g28690, mitochondrial OS=Cucumis ... | [more] |
A0A6J1K506 | 1.5e-265 | 87.57 | pentatricopeptide repeat-containing protein At1g28690, mitochondrial OS=Cucurbit... | [more] |
A0A6J1GUP8 | 7.6e-265 | 87.38 | pentatricopeptide repeat-containing protein At1g28690, mitochondrial OS=Cucurbit... | [more] |
Match Name | E-value | Identity | Description | |
XP_038895625.1 | 4.1e-289 | 95.22 | pentatricopeptide repeat-containing protein At1g28690, mitochondrial [Benincasa ... | [more] |
XP_004149063.1 | 3.1e-276 | 90.06 | pentatricopeptide repeat-containing protein At1g28690, mitochondrial [Cucumis sa... | [more] |
XP_016900228.1 | 6.8e-276 | 90.06 | PREDICTED: pentatricopeptide repeat-containing protein At1g28690, mitochondrial ... | [more] |
XP_023541225.1 | 1.2e-267 | 88.53 | pentatricopeptide repeat-containing protein At1g28690, mitochondrial [Cucurbita ... | [more] |
KAG6573296.1 | 1.9e-265 | 87.76 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
Match Name | E-value | Identity | Description | |
AT1G28690.1 | 3.6e-182 | 63.13 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G13600.1 | 4.5e-84 | 36.20 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G13770.1 | 2.1e-81 | 34.55 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G08510.1 | 4.0e-80 | 36.87 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G14820.1 | 2.6e-79 | 34.56 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |