Lsi02G006700 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi02G006700
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionBEST Arabidopsis thaliana protein match is: glycine-rich protein .
Locationchr02: 6004633 .. 6005688 (-)
RNA-Seq ExpressionLsi02G006700
SyntenyLsi02G006700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTTCTACGATTCCTACTACGATTCTGCTCAAACAGAGCTCCCAATTTTGCAATCCAGCAACGAACCCACCTTCTACAATCTCTTTGACTACCCACCTCCTTGTTATTTCGAACAGCCCTATGATTCTGAAGTCGATTACTTTCCCAATGTTCCCTACAGATCGAATTTCTATGAATTCCCCCAATTTATCGAACATGATCCCGTTGACCATGGCGCTTATGGCTATGGAATTAGCTACTCGGTCAATGCTTGTTCTGCATCGAGTTTCACTGTGCCAAATGTAATCGAATACGACCCTGATTTTTACAGCGAGGTGTCGACTCAATTTGTGATCTCTTACTCTGTTTCTGAATTCAACGAGACAGAATTTGAAGAATATGATCCAACCCCTTACGGCGGTGGCTATGATATTTCTGAAACCTACGGTAAGCCCCTTCAACCTTCAACTGAAATTTGTTACCCACCGTCCTCTTCTTCACCGCCGACTGCCACCGCCATTCCCATCTCCACAATACCCAAGGTAGAGGAAGCACCAAAGGGGAAAATCGAAGAACAGACAAAGCCATCGAGTGAAATCAAGCCGACCCAGATCGAGAAAGTTAACCAAAGCTCTTCGAGTGAGAGCGACACGGCTTCTGAATCTGAAGAAATTGAGGAAGTTAAAGCGATTCAATTGGCAGATCCGGGAATTGGGTATGGAAATGGAAGGGAAGTGAATCAATTTCCAAGTGGGTATGGACTGGAAGCGATGGATCTTTGTGAAAGTTTATTTGGGTATTGGCCATGTCTCTCACGGATAAAAAAACAAACAGCTTGTAGGCAACCCATCAACGGTTGTGGGCGTTGCCACGGCCATTGCTATTGCTATGGGAATTACGGCAACCAATGGGAGACGGCGGCGGATTATCTATTTGGAAGCCATAATCCATATCCAGATGGAAGAGGGGAAGGAGATGCTGTTTATGGCTATCAAAGACAAATTCAAGGGGAGCCTGTTTATGGGTACGTTTGGTTGAATCAAAATGACTTCAATCGGTGTGAAGATATTTGA

mRNA sequence

ATGGCCTTCTACGATTCCTACTACGATTCTGCTCAAACAGAGCTCCCAATTTTGCAATCCAGCAACGAACCCACCTTCTACAATCTCTTTGACTACCCACCTCCTTGTTATTTCGAACAGCCCTATGATTCTGAAGTCGATTACTTTCCCAATGTTCCCTACAGATCGAATTTCTATGAATTCCCCCAATTTATCGAACATGATCCCGTTGACCATGGCGCTTATGGCTATGGAATTAGCTACTCGGTCAATGCTTGTTCTGCATCGAGTTTCACTGTGCCAAATGTAATCGAATACGACCCTGATTTTTACAGCGAGGTGTCGACTCAATTTGTGATCTCTTACTCTGTTTCTGAATTCAACGAGACAGAATTTGAAGAATATGATCCAACCCCTTACGGCGGTGGCTATGATATTTCTGAAACCTACGGTAAGCCCCTTCAACCTTCAACTGAAATTTGTTACCCACCGTCCTCTTCTTCACCGCCGACTGCCACCGCCATTCCCATCTCCACAATACCCAAGGTAGAGGAAGCACCAAAGGGGAAAATCGAAGAACAGACAAAGCCATCGAGTGAAATCAAGCCGACCCAGATCGAGAAAGTTAACCAAAGCTCTTCGAGTGAGAGCGACACGGCTTCTGAATCTGAAGAAATTGAGGAAGTTAAAGCGATTCAATTGGCAGATCCGGGAATTGGGTATGGAAATGGAAGGGAAGTGAATCAATTTCCAAGTGGGTATGGACTGGAAGCGATGGATCTTTGTGAAAGTTTATTTGGGTATTGGCCATGTCTCTCACGGATAAAAAAACAAACAGCTTGTAGGCAACCCATCAACGGTTGTGGGCGTTGCCACGGCCATTGCTATTGCTATGGGAATTACGGCAACCAATGGGAGACGGCGGCGGATTATCTATTTGGAAGCCATAATCCATATCCAGATGGAAGAGGGGAAGGAGATGCTGTTTATGGCTATCAAAGACAAATTCAAGGGGAGCCTGTTTATGGGTACGTTTGGTTGAATCAAAATGACTTCAATCGGTGTGAAGATATTTGA

Coding sequence (CDS)

ATGGCCTTCTACGATTCCTACTACGATTCTGCTCAAACAGAGCTCCCAATTTTGCAATCCAGCAACGAACCCACCTTCTACAATCTCTTTGACTACCCACCTCCTTGTTATTTCGAACAGCCCTATGATTCTGAAGTCGATTACTTTCCCAATGTTCCCTACAGATCGAATTTCTATGAATTCCCCCAATTTATCGAACATGATCCCGTTGACCATGGCGCTTATGGCTATGGAATTAGCTACTCGGTCAATGCTTGTTCTGCATCGAGTTTCACTGTGCCAAATGTAATCGAATACGACCCTGATTTTTACAGCGAGGTGTCGACTCAATTTGTGATCTCTTACTCTGTTTCTGAATTCAACGAGACAGAATTTGAAGAATATGATCCAACCCCTTACGGCGGTGGCTATGATATTTCTGAAACCTACGGTAAGCCCCTTCAACCTTCAACTGAAATTTGTTACCCACCGTCCTCTTCTTCACCGCCGACTGCCACCGCCATTCCCATCTCCACAATACCCAAGGTAGAGGAAGCACCAAAGGGGAAAATCGAAGAACAGACAAAGCCATCGAGTGAAATCAAGCCGACCCAGATCGAGAAAGTTAACCAAAGCTCTTCGAGTGAGAGCGACACGGCTTCTGAATCTGAAGAAATTGAGGAAGTTAAAGCGATTCAATTGGCAGATCCGGGAATTGGGTATGGAAATGGAAGGGAAGTGAATCAATTTCCAAGTGGGTATGGACTGGAAGCGATGGATCTTTGTGAAAGTTTATTTGGGTATTGGCCATGTCTCTCACGGATAAAAAAACAAACAGCTTGTAGGCAACCCATCAACGGTTGTGGGCGTTGCCACGGCCATTGCTATTGCTATGGGAATTACGGCAACCAATGGGAGACGGCGGCGGATTATCTATTTGGAAGCCATAATCCATATCCAGATGGAAGAGGGGAAGGAGATGCTGTTTATGGCTATCAAAGACAAATTCAAGGGGAGCCTGTTTATGGGTACGTTTGGTTGAATCAAAATGACTTCAATCGGTGTGAAGATATTTGA

Protein sequence

MAFYDSYYDSAQTELPILQSSNEPTFYNLFDYPPPCYFEQPYDSEVDYFPNVPYRSNFYEFPQFIEHDPVDHGAYGYGISYSVNACSASSFTVPNVIEYDPDFYSEVSTQFVISYSVSEFNETEFEEYDPTPYGGGYDISETYGKPLQPSTEICYPPSSSSPPTATAIPISTIPKVEEAPKGKIEEQTKPSSEIKPTQIEKVNQSSSSESDTASESEEIEEVKAIQLADPGIGYGNGREVNQFPSGYGLEAMDLCESLFGYWPCLSRIKKQTACRQPINGCGRCHGHCYCYGNYGNQWETAADYLFGSHNPYPDGRGEGDAVYGYQRQIQGEPVYGYVWLNQNDFNRCEDI
Homology
BLAST of Lsi02G006700 vs. ExPASy Swiss-Prot
Match: Q9FKA5 (Uncharacterized protein At5g39570 OS=Arabidopsis thaliana OX=3702 GN=At5g39570 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 5.0e-07
Identity = 24/45 (53.33%), Postives = 33/45 (73.33%), Query Frame = 0

Query: 115 YSVSEFNETEFEEYDPTPYGGGYDISETYGKPLQPSTEICYPPSS 160
           Y+  + +  +F+E+DPTPY GGYDI+  YG+P+ PS E CYP SS
Sbjct: 4   YTRDDNDVDDFDEFDPTPYSGGYDITVIYGRPIPPSDETCYPLSS 48

BLAST of Lsi02G006700 vs. ExPASy TrEMBL
Match: A0A1S3B404 (uncharacterized protein LOC103485767 OS=Cucumis melo OX=3656 GN=LOC103485767 PE=4 SV=1)

HSP 1 Score: 618.2 bits (1593), Expect = 2.1e-173
Identity = 303/364 (83.24%), Postives = 316/364 (86.81%), Query Frame = 0

Query: 1   MAFY-------DSYYDSAQTELPILQSSNEPTFYNLFDYPPPCYFEQPYDSEVDYFP-NV 60
           MAFY       DSYY+SAQ E PILQSSNEPTFYNLFDYPPPCYF Q YDSEV YF  N 
Sbjct: 17  MAFYDSYDFYDDSYYNSAQIEPPILQSSNEPTFYNLFDYPPPCYFGQAYDSEVGYFAINA 76

Query: 61  PYRSNFYEFPQFIEHDPVDHGAYGYGISYSVNACSASSFTVPNVIEYDPDFYSEVSTQFV 120
            Y SNF EFPQ IEH+PVDHG YGY I YS NACSASSFT+P V  YDPD YSEVSTQFV
Sbjct: 77  AYGSNFSEFPQLIEHEPVDHGDYGYAIRYSANACSASSFTLPKVFGYDPDLYSEVSTQFV 136

Query: 121 ISYSVSEFNETEFEEYDPTPYGGGYDISETYGKPLQPSTEICYPPSSSS-----PPTATA 180
           ISYSVSEFNET+FEEYDPTPY GGYDI ETYGKPLQPSTEICYPPSSSS     PPTATA
Sbjct: 137 ISYSVSEFNETDFEEYDPTPYDGGYDIYETYGKPLQPSTEICYPPSSSSPSKPPPPTATA 196

Query: 181 IPISTIPKVEEAPKGKIEEQTKPSSEIKPTQIEKVNQSSSSESDTASESEEIEEVKAIQL 240
           IPI+TIPK++EAPKGKIEEQTKPSSEIKP QIEK N SSSS+SDT SES EIEEVKAIQL
Sbjct: 197 IPITTIPKIDEAPKGKIEEQTKPSSEIKPIQIEKTNNSSSSDSDTTSESGEIEEVKAIQL 256

Query: 241 ADPGIGYGNGREVNQFPSGYGLEAMDLCESLFGYWPCLSRIKKQTACRQPINGCGRCHGH 300
            DPGIGYGNGREVN+FPSGYGLEAMDLCESLFGYWPCLSR K+QT CRQP NGCGRCHGH
Sbjct: 257 GDPGIGYGNGREVNEFPSGYGLEAMDLCESLFGYWPCLSRAKRQTLCRQPKNGCGRCHGH 316

Query: 301 CYCYGNYGNQWETAADYLFGSHNPYPDGRGEGDAVYGYQRQIQGEPVYGYVWLNQNDFNR 352
           CYCYGNYGNQW+TAA+YLFGSHNPY DGRGEGD  YGYQRQ Q EPVYGYVWLNQNDFNR
Sbjct: 317 CYCYGNYGNQWQTAAEYLFGSHNPYLDGRGEGDGFYGYQRQFQEEPVYGYVWLNQNDFNR 376

BLAST of Lsi02G006700 vs. ExPASy TrEMBL
Match: A0A5D3DRV2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00010 PE=4 SV=1)

HSP 1 Score: 614.4 bits (1583), Expect = 3.0e-172
Identity = 301/364 (82.69%), Postives = 315/364 (86.54%), Query Frame = 0

Query: 1   MAFY-------DSYYDSAQTELPILQSSNEPTFYNLFDYPPPCYFEQPYDSEVDYFP-NV 60
           MAFY       DSYY+SAQ E PILQSSNEPTFYNLFDYPPPCYF Q YDSEV YF  N 
Sbjct: 1   MAFYDSYDFYDDSYYNSAQIEPPILQSSNEPTFYNLFDYPPPCYFGQAYDSEVGYFAINA 60

Query: 61  PYRSNFYEFPQFIEHDPVDHGAYGYGISYSVNACSASSFTVPNVIEYDPDFYSEVSTQFV 120
            Y SNF EFPQ IEH+PVDHG YGY I YS NACSASSFT+P V  YDPD YSEVSTQFV
Sbjct: 61  AYGSNFSEFPQLIEHEPVDHGDYGYAIRYSANACSASSFTLPKVFGYDPDLYSEVSTQFV 120

Query: 121 ISYSVSEFNETEFEEYDPTPYGGGYDISETYGKPLQPSTEICYPPSSSS-----PPTATA 180
           ISYSVSEFNET+FEEYDPTPY GGYDI ETYGKPLQPSTEICYPPSSSS     PPTATA
Sbjct: 121 ISYSVSEFNETDFEEYDPTPYDGGYDIYETYGKPLQPSTEICYPPSSSSPSKPPPPTATA 180

Query: 181 IPISTIPKVEEAPKGKIEEQTKPSSEIKPTQIEKVNQSSSSESDTASESEEIEEVKAIQL 240
           IPI+TIPK++EAPKGKIEEQTKPSSEIKP QIEK N S SS+SDT SES EIEEVKAIQL
Sbjct: 181 IPITTIPKIDEAPKGKIEEQTKPSSEIKPIQIEKTNNSYSSDSDTTSESGEIEEVKAIQL 240

Query: 241 ADPGIGYGNGREVNQFPSGYGLEAMDLCESLFGYWPCLSRIKKQTACRQPINGCGRCHGH 300
            DPGIGYGNGREVN+FPSGYGLEAMDLCESLFGYWPCLSR K+QT CRQP NGCGRCHGH
Sbjct: 241 GDPGIGYGNGREVNEFPSGYGLEAMDLCESLFGYWPCLSRAKRQTLCRQPKNGCGRCHGH 300

Query: 301 CYCYGNYGNQWETAADYLFGSHNPYPDGRGEGDAVYGYQRQIQGEPVYGYVWLNQNDFNR 352
           CYCYGNYGNQW+TAA+YLFGSHNPY DGRGEGD  YGYQR+ Q EPVYGYVWLNQNDFNR
Sbjct: 301 CYCYGNYGNQWQTAAEYLFGSHNPYLDGRGEGDGFYGYQRRFQEEPVYGYVWLNQNDFNR 360

BLAST of Lsi02G006700 vs. ExPASy TrEMBL
Match: A0A0A0LUY1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G070580 PE=4 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 2.3e-164
Identity = 293/369 (79.40%), Postives = 310/369 (84.01%), Query Frame = 0

Query: 1   MAFY-------DSYYDSAQTELPILQSSNEPTFYNLFDYPPPCYFEQPYDSEVDYFPN-V 60
           MAFY       DSYY+ AQ E PI QSSNEP FYNLFDYPPPCYF Q YD EV Y  N  
Sbjct: 1   MAFYNSYDFYDDSYYNYAQIEPPIPQSSNEPNFYNLFDYPPPCYFGQAYDYEVGYSANDA 60

Query: 61  PYRSNFYEFPQFIEHDPVDHGAYGYGISYSVNACSASSFTVPNVIEYDPDFYSEVSTQFV 120
           PYRSNF E PQ I+H+PVDHG YGY I YS NACSASSFT+P + EY+PD YSEVSTQFV
Sbjct: 61  PYRSNFNELPQLIDHEPVDHGDYGYAIRYSANACSASSFTLPKLCEYNPDLYSEVSTQFV 120

Query: 121 ISYSVSEFNETEFEEYDPTPYGGGYDISETYGKPLQPSTEICYPPSSSS---------PP 180
           ISYSVS+FNETEFEEYDPTPY GGYDISETYGKPLQPS EICYPPSSSS         PP
Sbjct: 121 ISYSVSQFNETEFEEYDPTPYDGGYDISETYGKPLQPSIEICYPPSSSSPSKSPPPPPPP 180

Query: 181 TATAIP-ISTIPKVEEAPKGKIEEQTKPSSEIKPTQIEKVNQSSSSESDTASESEEIEEV 240
           TATAIP I+TIPK++EAPKGKIEEQTKPSSEIKPTQIEK N SSSS+SDT SES EIEE 
Sbjct: 181 TATAIPIITTIPKIDEAPKGKIEEQTKPSSEIKPTQIEKTNNSSSSDSDTTSESGEIEED 240

Query: 241 KAIQLADPGIGYGNGREVNQFPSGYGLEAMDLCESLFGYWPCLSRIKKQTACRQPINGCG 300
           KAIQL DPGIGYGN REVN+FPSG GLEAMDLCESLFGYWPCLSR K+QTA RQP NGCG
Sbjct: 241 KAIQLGDPGIGYGNAREVNEFPSGCGLEAMDLCESLFGYWPCLSRAKRQTAYRQPKNGCG 300

Query: 301 RCHGHCYCYGNYGNQWETAADYLFGSHNPYPDGRGEGDAVYGYQRQIQGEPVYGYVWLNQ 352
           RCHGHCYCYGNYGN+W+TAA+YLFGSHNPY DGR EGD VYGYQRQ Q EPVYGYVWLNQ
Sbjct: 301 RCHGHCYCYGNYGNEWQTAAEYLFGSHNPYLDGRREGDVVYGYQRQFQEEPVYGYVWLNQ 360

BLAST of Lsi02G006700 vs. ExPASy TrEMBL
Match: A0A6J1KI70 (uncharacterized protein LOC111495462 OS=Cucurbita maxima OX=3661 GN=LOC111495462 PE=4 SV=1)

HSP 1 Score: 565.5 bits (1456), Expect = 1.6e-157
Identity = 288/360 (80.00%), Postives = 298/360 (82.78%), Query Frame = 0

Query: 1   MAF---YDSYYDSAQTELPILQSSNEPTFYNLFDYPPPCYFEQPYDSEVDYFPNVPYRSN 60
           MAF   YDSYYDSAQTE PI QSS EPTFYNLFDYPPPCYF Q Y          PY SN
Sbjct: 1   MAFYDSYDSYYDSAQTEPPIPQSSYEPTFYNLFDYPPPCYFGQAY---------APYTSN 60

Query: 61  FYEFPQFIEHDPVDHGAYGYGISYSVNACSASSFTVPNVIEYDPDFYSE----VSTQFVI 120
           F EFPQ IEH PVDHGAYGY ISYS NACSAS+F+VP VIEYD D YS+    VS+QFVI
Sbjct: 61  FNEFPQLIEHQPVDHGAYGYTISYSANACSASTFSVPKVIEYDSDLYSDGTQKVSSQFVI 120

Query: 121 SYSVSEFNETEFEEYDPTPYGGGYDISETYGKPLQPSTEICYPPSSSSP--PTATAIPIS 180
           SYSVSEFNETEFEEYDPTPYGGGYDI ETYGKPLQPST+ICY PSSSSP  P  TAIPIS
Sbjct: 121 SYSVSEFNETEFEEYDPTPYGGGYDIHETYGKPLQPSTDICYSPSSSSPPKPPPTAIPIS 180

Query: 181 TIPKVEEAPKGKIEEQTKPSSEIKPTQIEKVNQSSSSESDTASESEEIEEVKAIQLADPG 240
            I    EAPK KIEE+T+PSSEIKPTQIEK N        TASESEEIEEVKAI  ADPG
Sbjct: 181 AI---HEAPKEKIEEKTEPSSEIKPTQIEKDN--------TASESEEIEEVKAIPFADPG 240

Query: 241 IGYGNGREVNQFPSGYGLEAMDLCESLFGYWPCLSRIKKQTACRQPINGCGRCHGHCYCY 300
           IGYGNGREVNQFPSGYGLEAMDLCESLFGYWPCLSRIKKQTACRQP NGCGRCHGHCYCY
Sbjct: 241 IGYGNGREVNQFPSGYGLEAMDLCESLFGYWPCLSRIKKQTACRQPNNGCGRCHGHCYCY 300

Query: 301 GNYGNQWETAADYLFGSHNPYPDGRGEGDAVYGYQRQIQGEPVYGYVWLNQNDFNRCEDI 352
           GNYGNQW+TAADYLFGSHNPYPDGR EGD VYGYQRQ Q EPVY YVWLNQNDF R +D+
Sbjct: 301 GNYGNQWQTAADYLFGSHNPYPDGRSEGDGVYGYQRQYQAEPVYRYVWLNQNDFVRSDDV 340

BLAST of Lsi02G006700 vs. ExPASy TrEMBL
Match: A0A6J1EHF5 (uncharacterized protein LOC111434325 OS=Cucurbita moschata OX=3662 GN=LOC111434325 PE=4 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 7.4e-155
Identity = 281/354 (79.38%), Postives = 293/354 (82.77%), Query Frame = 0

Query: 1   MAFYDSYYDSAQTELPILQSSNEPTFYNLFDYPPPCYFEQPYDSEVDYFPNVPYRSNFYE 60
           MAFYDSYYDSAQ E PI QSS EPTFYNLFDYPPPCYF Q Y          PY S+  E
Sbjct: 1   MAFYDSYYDSAQIEPPIPQSSYEPTFYNLFDYPPPCYFGQAY---------APYTSSSNE 60

Query: 61  FPQFIEHDPVDHGAYGYGISYSVNACSASSFTVPNVIEYDPDFYSE----VSTQFVISYS 120
           FPQ IE+ PVDHGAYGY ISYS NACSAS+F+VP VIEYDPDFYS+    VS+QFVISYS
Sbjct: 61  FPQLIEYQPVDHGAYGYTISYSANACSASTFSVPKVIEYDPDFYSDGYQKVSSQFVISYS 120

Query: 121 VSEFNETEFEEYDPTPYGGGYDISETYGKPLQPSTEICYPPSSSSPPTATAIPISTIPKV 180
           VSEFNETEFEEYDPTPYGGGYDI ETYGKPLQPST+ICY PSSSSPP     P  T   +
Sbjct: 121 VSEFNETEFEEYDPTPYGGGYDIHETYGKPLQPSTDICYSPSSSSPPK----PPPT--AI 180

Query: 181 EEAPKGKIEEQTKPSSEIKPTQIEKVNQSSSSESDTASESEEIEEVKAIQLADPGIGYGN 240
           +EAPK KIEE+TKPSSEIKPTQIEK N        TASESEEIEEVKAI  ADPGIGYGN
Sbjct: 181 QEAPKEKIEEKTKPSSEIKPTQIEKDN--------TASESEEIEEVKAIPFADPGIGYGN 240

Query: 241 GREVNQFPSGYGLEAMDLCESLFGYWPCLSRIKKQTACRQPINGCGRCHGHCYCYGNYGN 300
           GREVNQFPSGYGLEAMDLCESLFGYWPCLSRIKKQTACRQP NGCGRCHGHCYCYGNYGN
Sbjct: 241 GREVNQFPSGYGLEAMDLCESLFGYWPCLSRIKKQTACRQPNNGCGRCHGHCYCYGNYGN 300

Query: 301 QWETAADYLFGSHNPYPDGRGEGDAVYGYQRQIQGEPVYGYVWLNQNDFNRCED 351
           QW+TAADYLFGSHNPYPDGR EGD VYGYQ Q Q EPVYGYVWLNQND  R +D
Sbjct: 301 QWQTAADYLFGSHNPYPDGRSEGDGVYGYQTQYQTEPVYGYVWLNQNDLVRSDD 331

BLAST of Lsi02G006700 vs. NCBI nr
Match: XP_038895690.1 (uncharacterized protein LOC120083862 [Benincasa hispida])

HSP 1 Score: 657.9 bits (1696), Expect = 4.9e-185
Identity = 316/350 (90.29%), Postives = 324/350 (92.57%), Query Frame = 0

Query: 2   AFYDSYYDSAQTELPILQSSNEPTFYNLFDYPPPCYFEQPYDSEVDYFPNVPYRSNFYEF 61
           ++ DSYY SAQ E PI QSSNEPTFYNLFDYPPPCY EQ YDSEV YF N PYRSNFYEF
Sbjct: 9   SYNDSYYHSAQIEPPISQSSNEPTFYNLFDYPPPCYLEQVYDSEVGYFANAPYRSNFYEF 68

Query: 62  PQFIEHDPVDHGAYGYGISYSVNACSASSFTVPNVIEYDPDFYSEVSTQFVISYSVSEFN 121
           PQ IE + V+HGAYGY ISYS NACSA SFTVP VIEYDPDFYSEVSTQFVISYSVSEFN
Sbjct: 69  PQLIERETVNHGAYGYAISYSANACSAPSFTVPKVIEYDPDFYSEVSTQFVISYSVSEFN 128

Query: 122 ETEFEEYDPTPYGGGYDISETYGKPLQPSTEICYPPSSSSPPTATAIPISTIPKVEEAPK 181
           ETEFEEYDPTPYGGGYDISETYGKPLQPSTEICYPPSSSSPPTATAIPI TIPK EE PK
Sbjct: 129 ETEFEEYDPTPYGGGYDISETYGKPLQPSTEICYPPSSSSPPTATAIPIFTIPKEEEPPK 188

Query: 182 GKIEEQTKPSSEIKPTQIEKVNQSSSSESDTASESEEIEEVKAIQLADPGIGYGNGREVN 241
           GKIEEQTKPSSEIKPTQIEKVN SSSSESDTASESEEIEEVKAIQLADPGI YGNGRE N
Sbjct: 189 GKIEEQTKPSSEIKPTQIEKVNHSSSSESDTASESEEIEEVKAIQLADPGIEYGNGREAN 248

Query: 242 QFPSGYGLEAMDLCESLFGYWPCLSRIKKQTACRQPINGCGRCHGHCYCYGNYGNQWETA 301
           QFPSGYGLEAMDLCESLFGYWPCLSR+KKQT CRQP NGCGRCHGHCYCYGNYGNQW+TA
Sbjct: 249 QFPSGYGLEAMDLCESLFGYWPCLSRVKKQTPCRQPKNGCGRCHGHCYCYGNYGNQWQTA 308

Query: 302 ADYLFGSHNPYPDGRGEGDAVYGYQRQIQGEPVYGYVWLNQNDFNRCEDI 352
           A+YLFGSHNPYPDGRGEGDAVYGYQRQIQGEPVYGYVWLNQNDFN CED+
Sbjct: 309 AEYLFGSHNPYPDGRGEGDAVYGYQRQIQGEPVYGYVWLNQNDFNGCEDV 358

BLAST of Lsi02G006700 vs. NCBI nr
Match: XP_008441695.1 (PREDICTED: uncharacterized protein LOC103485767 [Cucumis melo])

HSP 1 Score: 618.2 bits (1593), Expect = 4.3e-173
Identity = 303/364 (83.24%), Postives = 316/364 (86.81%), Query Frame = 0

Query: 1   MAFY-------DSYYDSAQTELPILQSSNEPTFYNLFDYPPPCYFEQPYDSEVDYFP-NV 60
           MAFY       DSYY+SAQ E PILQSSNEPTFYNLFDYPPPCYF Q YDSEV YF  N 
Sbjct: 17  MAFYDSYDFYDDSYYNSAQIEPPILQSSNEPTFYNLFDYPPPCYFGQAYDSEVGYFAINA 76

Query: 61  PYRSNFYEFPQFIEHDPVDHGAYGYGISYSVNACSASSFTVPNVIEYDPDFYSEVSTQFV 120
            Y SNF EFPQ IEH+PVDHG YGY I YS NACSASSFT+P V  YDPD YSEVSTQFV
Sbjct: 77  AYGSNFSEFPQLIEHEPVDHGDYGYAIRYSANACSASSFTLPKVFGYDPDLYSEVSTQFV 136

Query: 121 ISYSVSEFNETEFEEYDPTPYGGGYDISETYGKPLQPSTEICYPPSSSS-----PPTATA 180
           ISYSVSEFNET+FEEYDPTPY GGYDI ETYGKPLQPSTEICYPPSSSS     PPTATA
Sbjct: 137 ISYSVSEFNETDFEEYDPTPYDGGYDIYETYGKPLQPSTEICYPPSSSSPSKPPPPTATA 196

Query: 181 IPISTIPKVEEAPKGKIEEQTKPSSEIKPTQIEKVNQSSSSESDTASESEEIEEVKAIQL 240
           IPI+TIPK++EAPKGKIEEQTKPSSEIKP QIEK N SSSS+SDT SES EIEEVKAIQL
Sbjct: 197 IPITTIPKIDEAPKGKIEEQTKPSSEIKPIQIEKTNNSSSSDSDTTSESGEIEEVKAIQL 256

Query: 241 ADPGIGYGNGREVNQFPSGYGLEAMDLCESLFGYWPCLSRIKKQTACRQPINGCGRCHGH 300
            DPGIGYGNGREVN+FPSGYGLEAMDLCESLFGYWPCLSR K+QT CRQP NGCGRCHGH
Sbjct: 257 GDPGIGYGNGREVNEFPSGYGLEAMDLCESLFGYWPCLSRAKRQTLCRQPKNGCGRCHGH 316

Query: 301 CYCYGNYGNQWETAADYLFGSHNPYPDGRGEGDAVYGYQRQIQGEPVYGYVWLNQNDFNR 352
           CYCYGNYGNQW+TAA+YLFGSHNPY DGRGEGD  YGYQRQ Q EPVYGYVWLNQNDFNR
Sbjct: 317 CYCYGNYGNQWQTAAEYLFGSHNPYLDGRGEGDGFYGYQRQFQEEPVYGYVWLNQNDFNR 376

BLAST of Lsi02G006700 vs. NCBI nr
Match: KAA0056916.1 (uncharacterized protein E6C27_scaffold96G00880 [Cucumis melo var. makuwa] >TYK26343.1 uncharacterized protein E5676_scaffold861G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 614.4 bits (1583), Expect = 6.2e-172
Identity = 301/364 (82.69%), Postives = 315/364 (86.54%), Query Frame = 0

Query: 1   MAFY-------DSYYDSAQTELPILQSSNEPTFYNLFDYPPPCYFEQPYDSEVDYFP-NV 60
           MAFY       DSYY+SAQ E PILQSSNEPTFYNLFDYPPPCYF Q YDSEV YF  N 
Sbjct: 1   MAFYDSYDFYDDSYYNSAQIEPPILQSSNEPTFYNLFDYPPPCYFGQAYDSEVGYFAINA 60

Query: 61  PYRSNFYEFPQFIEHDPVDHGAYGYGISYSVNACSASSFTVPNVIEYDPDFYSEVSTQFV 120
            Y SNF EFPQ IEH+PVDHG YGY I YS NACSASSFT+P V  YDPD YSEVSTQFV
Sbjct: 61  AYGSNFSEFPQLIEHEPVDHGDYGYAIRYSANACSASSFTLPKVFGYDPDLYSEVSTQFV 120

Query: 121 ISYSVSEFNETEFEEYDPTPYGGGYDISETYGKPLQPSTEICYPPSSSS-----PPTATA 180
           ISYSVSEFNET+FEEYDPTPY GGYDI ETYGKPLQPSTEICYPPSSSS     PPTATA
Sbjct: 121 ISYSVSEFNETDFEEYDPTPYDGGYDIYETYGKPLQPSTEICYPPSSSSPSKPPPPTATA 180

Query: 181 IPISTIPKVEEAPKGKIEEQTKPSSEIKPTQIEKVNQSSSSESDTASESEEIEEVKAIQL 240
           IPI+TIPK++EAPKGKIEEQTKPSSEIKP QIEK N S SS+SDT SES EIEEVKAIQL
Sbjct: 181 IPITTIPKIDEAPKGKIEEQTKPSSEIKPIQIEKTNNSYSSDSDTTSESGEIEEVKAIQL 240

Query: 241 ADPGIGYGNGREVNQFPSGYGLEAMDLCESLFGYWPCLSRIKKQTACRQPINGCGRCHGH 300
            DPGIGYGNGREVN+FPSGYGLEAMDLCESLFGYWPCLSR K+QT CRQP NGCGRCHGH
Sbjct: 241 GDPGIGYGNGREVNEFPSGYGLEAMDLCESLFGYWPCLSRAKRQTLCRQPKNGCGRCHGH 300

Query: 301 CYCYGNYGNQWETAADYLFGSHNPYPDGRGEGDAVYGYQRQIQGEPVYGYVWLNQNDFNR 352
           CYCYGNYGNQW+TAA+YLFGSHNPY DGRGEGD  YGYQR+ Q EPVYGYVWLNQNDFNR
Sbjct: 301 CYCYGNYGNQWQTAAEYLFGSHNPYLDGRGEGDGFYGYQRRFQEEPVYGYVWLNQNDFNR 360

BLAST of Lsi02G006700 vs. NCBI nr
Match: XP_011652905.1 (uncharacterized protein At5g39570 [Cucumis sativus] >KGN64592.1 hypothetical protein Csa_013087 [Cucumis sativus])

HSP 1 Score: 588.2 bits (1515), Expect = 4.7e-164
Identity = 293/369 (79.40%), Postives = 310/369 (84.01%), Query Frame = 0

Query: 1   MAFY-------DSYYDSAQTELPILQSSNEPTFYNLFDYPPPCYFEQPYDSEVDYFPN-V 60
           MAFY       DSYY+ AQ E PI QSSNEP FYNLFDYPPPCYF Q YD EV Y  N  
Sbjct: 1   MAFYNSYDFYDDSYYNYAQIEPPIPQSSNEPNFYNLFDYPPPCYFGQAYDYEVGYSANDA 60

Query: 61  PYRSNFYEFPQFIEHDPVDHGAYGYGISYSVNACSASSFTVPNVIEYDPDFYSEVSTQFV 120
           PYRSNF E PQ I+H+PVDHG YGY I YS NACSASSFT+P + EY+PD YSEVSTQFV
Sbjct: 61  PYRSNFNELPQLIDHEPVDHGDYGYAIRYSANACSASSFTLPKLCEYNPDLYSEVSTQFV 120

Query: 121 ISYSVSEFNETEFEEYDPTPYGGGYDISETYGKPLQPSTEICYPPSSSS---------PP 180
           ISYSVS+FNETEFEEYDPTPY GGYDISETYGKPLQPS EICYPPSSSS         PP
Sbjct: 121 ISYSVSQFNETEFEEYDPTPYDGGYDISETYGKPLQPSIEICYPPSSSSPSKSPPPPPPP 180

Query: 181 TATAIP-ISTIPKVEEAPKGKIEEQTKPSSEIKPTQIEKVNQSSSSESDTASESEEIEEV 240
           TATAIP I+TIPK++EAPKGKIEEQTKPSSEIKPTQIEK N SSSS+SDT SES EIEE 
Sbjct: 181 TATAIPIITTIPKIDEAPKGKIEEQTKPSSEIKPTQIEKTNNSSSSDSDTTSESGEIEED 240

Query: 241 KAIQLADPGIGYGNGREVNQFPSGYGLEAMDLCESLFGYWPCLSRIKKQTACRQPINGCG 300
           KAIQL DPGIGYGN REVN+FPSG GLEAMDLCESLFGYWPCLSR K+QTA RQP NGCG
Sbjct: 241 KAIQLGDPGIGYGNAREVNEFPSGCGLEAMDLCESLFGYWPCLSRAKRQTAYRQPKNGCG 300

Query: 301 RCHGHCYCYGNYGNQWETAADYLFGSHNPYPDGRGEGDAVYGYQRQIQGEPVYGYVWLNQ 352
           RCHGHCYCYGNYGN+W+TAA+YLFGSHNPY DGR EGD VYGYQRQ Q EPVYGYVWLNQ
Sbjct: 301 RCHGHCYCYGNYGNEWQTAAEYLFGSHNPYLDGRREGDVVYGYQRQFQEEPVYGYVWLNQ 360

BLAST of Lsi02G006700 vs. NCBI nr
Match: XP_023001286.1 (uncharacterized protein LOC111495462 [Cucurbita maxima])

HSP 1 Score: 565.5 bits (1456), Expect = 3.3e-157
Identity = 288/360 (80.00%), Postives = 298/360 (82.78%), Query Frame = 0

Query: 1   MAF---YDSYYDSAQTELPILQSSNEPTFYNLFDYPPPCYFEQPYDSEVDYFPNVPYRSN 60
           MAF   YDSYYDSAQTE PI QSS EPTFYNLFDYPPPCYF Q Y          PY SN
Sbjct: 1   MAFYDSYDSYYDSAQTEPPIPQSSYEPTFYNLFDYPPPCYFGQAY---------APYTSN 60

Query: 61  FYEFPQFIEHDPVDHGAYGYGISYSVNACSASSFTVPNVIEYDPDFYSE----VSTQFVI 120
           F EFPQ IEH PVDHGAYGY ISYS NACSAS+F+VP VIEYD D YS+    VS+QFVI
Sbjct: 61  FNEFPQLIEHQPVDHGAYGYTISYSANACSASTFSVPKVIEYDSDLYSDGTQKVSSQFVI 120

Query: 121 SYSVSEFNETEFEEYDPTPYGGGYDISETYGKPLQPSTEICYPPSSSSP--PTATAIPIS 180
           SYSVSEFNETEFEEYDPTPYGGGYDI ETYGKPLQPST+ICY PSSSSP  P  TAIPIS
Sbjct: 121 SYSVSEFNETEFEEYDPTPYGGGYDIHETYGKPLQPSTDICYSPSSSSPPKPPPTAIPIS 180

Query: 181 TIPKVEEAPKGKIEEQTKPSSEIKPTQIEKVNQSSSSESDTASESEEIEEVKAIQLADPG 240
            I    EAPK KIEE+T+PSSEIKPTQIEK N        TASESEEIEEVKAI  ADPG
Sbjct: 181 AI---HEAPKEKIEEKTEPSSEIKPTQIEKDN--------TASESEEIEEVKAIPFADPG 240

Query: 241 IGYGNGREVNQFPSGYGLEAMDLCESLFGYWPCLSRIKKQTACRQPINGCGRCHGHCYCY 300
           IGYGNGREVNQFPSGYGLEAMDLCESLFGYWPCLSRIKKQTACRQP NGCGRCHGHCYCY
Sbjct: 241 IGYGNGREVNQFPSGYGLEAMDLCESLFGYWPCLSRIKKQTACRQPNNGCGRCHGHCYCY 300

Query: 301 GNYGNQWETAADYLFGSHNPYPDGRGEGDAVYGYQRQIQGEPVYGYVWLNQNDFNRCEDI 352
           GNYGNQW+TAADYLFGSHNPYPDGR EGD VYGYQRQ Q EPVY YVWLNQNDF R +D+
Sbjct: 301 GNYGNQWQTAADYLFGSHNPYPDGRSEGDGVYGYQRQYQAEPVYRYVWLNQNDFVRSDDV 340

BLAST of Lsi02G006700 vs. TAIR 10
Match: AT1G11440.1 (BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G29075.1); Has 19337 Blast hits to 8589 proteins in 488 species: Archae - 26; Bacteria - 641; Metazoa - 7852; Fungi - 2167; Plants - 955; Viruses - 616; Other Eukaryotes - 7080 (source: NCBI BLink). )

HSP 1 Score: 128.6 bits (322), Expect = 9.6e-30
Identity = 107/303 (35.31%), Postives = 144/303 (47.52%), Query Frame = 0

Query: 68  DPVDHGAYGYGISYSVN-----ACSASSFTVPNVIEYDPDFYS--EVSTQFVISYSVS-- 127
           DP+ +  Y +  S S       A S S+ + P  + YDP+ Y+  E   QF I  SV+  
Sbjct: 64  DPMSYNCYNWNGSESETTSAYVAYSVSTMSEPKHLFYDPNLYTTYESPPQFSIYCSVASA 123

Query: 128 -EFNETEFEEYDPTPYGGGYDISETYGKPLQPSTEICYPPSSS------SPPTATA-IPI 187
            +FNE EF+EYDPTPYGGGYD+  TYGKPL PS E CYP S++      SPP   A +P+
Sbjct: 124 LDFNEPEFDEYDPTPYGGGYDVVATYGKPLPPSVETCYPCSTAPHAKAPSPPEIIAPVPL 183

Query: 188 STIPKVEEAPKGKIEEQTKPSSEIKPTQIEKVNQSSSSE------------SDTASESEE 247
                 ++    K     +P  E+KP +  K  +    E             D   E EE
Sbjct: 184 GIYDGGQKNVVKKRVSFAEPVEEVKPIETIKEQEQEQDEDYDEESEDEDDGDDDDEEEEE 243

Query: 248 IEEVKAIQLADPGIGYGNGR-------EVNQF--PSGYGLEAMDLCESLF-GYWPCLSRI 307
            +E    +  D    YGN         EV     PSGYGLEA DLCE +F GY+PC+ R 
Sbjct: 244 GDEEAKEEEKDHSSSYGNEEYEVVDKGEVKALYVPSGYGLEATDLCEVIFGGYFPCVLRN 303

Query: 308 KKQTACRQPINGCGRCHGHCYCYGNYGNQWETAADYLFGSHNPYP-DGRGEGD----AVY 327
           K++    Q       C        N  + W+T +D+LFG   PY  + R E +    + Y
Sbjct: 304 KRRQEDEQDRGAAVSC-----WESNDSDPWKTTSDHLFGDSYPYGYENRSERNQFEVSSY 361

BLAST of Lsi02G006700 vs. TAIR 10
Match: AT5G39570.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G29075.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 57.0 bits (136), Expect = 3.5e-08
Identity = 24/45 (53.33%), Postives = 33/45 (73.33%), Query Frame = 0

Query: 115 YSVSEFNETEFEEYDPTPYGGGYDISETYGKPLQPSTEICYPPSS 160
           Y+  + +  +F+E+DPTPY GGYDI+  YG+P+ PS E CYP SS
Sbjct: 4   YTRDDNDVDDFDEFDPTPYSGGYDITVIYGRPIPPSDETCYPLSS 48

BLAST of Lsi02G006700 vs. TAIR 10
Match: AT3G29075.1 (glycine-rich protein )

HSP 1 Score: 42.7 bits (99), Expect = 6.9e-04
Identity = 38/134 (28.36%), Postives = 60/134 (44.78%), Query Frame = 0

Query: 115 YSVSEFNETEFEEYDPTPYGGGYDISETYGKPLQPSTEICYPPSSSSPPTATAIPISTIP 174
           Y+  + +  +F EYDP PY GGYDI+ TYG+ + PS E CYP SS S         +   
Sbjct: 4   YTNDDNDVDDFTEYDPMPYSGGYDITVTYGRSIPPSDETCYPLSSLSGDAFEYQRPNFSS 63

Query: 175 KVEEAPKGKIEEQTKPSSEIKPTQIEKVNQSSSSESDTASESEEIEEVKAIQLADPGIGY 234
             + +       +T+ SS  +P  +   +      +       E+E  +  + ++ G GY
Sbjct: 64  NHDSSAYDDQALKTEYSSYARPGPVGSGSDFGRKPNSGYGGRTEVEYGRKTE-SEHGSGY 123

Query: 235 GNGREVNQFPSGYG 249
           G   E +     YG
Sbjct: 124 GGRIESDYVKPSYG 136

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FKA55.0e-0753.33Uncharacterized protein At5g39570 OS=Arabidopsis thaliana OX=3702 GN=At5g39570 P... [more]
Match NameE-valueIdentityDescription
A0A1S3B4042.1e-17383.24uncharacterized protein LOC103485767 OS=Cucumis melo OX=3656 GN=LOC103485767 PE=... [more]
A0A5D3DRV23.0e-17282.69Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LUY12.3e-16479.40Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G070580 PE=4 SV=1[more]
A0A6J1KI701.6e-15780.00uncharacterized protein LOC111495462 OS=Cucurbita maxima OX=3661 GN=LOC111495462... [more]
A0A6J1EHF57.4e-15579.38uncharacterized protein LOC111434325 OS=Cucurbita moschata OX=3662 GN=LOC1114343... [more]
Match NameE-valueIdentityDescription
XP_038895690.14.9e-18590.29uncharacterized protein LOC120083862 [Benincasa hispida][more]
XP_008441695.14.3e-17383.24PREDICTED: uncharacterized protein LOC103485767 [Cucumis melo][more]
KAA0056916.16.2e-17282.69uncharacterized protein E6C27_scaffold96G00880 [Cucumis melo var. makuwa] >TYK26... [more]
XP_011652905.14.7e-16479.40uncharacterized protein At5g39570 [Cucumis sativus] >KGN64592.1 hypothetical pro... [more]
XP_023001286.13.3e-15780.00uncharacterized protein LOC111495462 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT1G11440.19.6e-3035.31BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G29075... [more]
AT5G39570.13.5e-0853.33FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT3G29075.16.9e-0428.36glycine-rich protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..168
NoneNo IPR availablePANTHERPTHR33971:SF3OS02G0743600 PROTEINcoord: 1..349
IPR038943PLD-regulated protein1-likePANTHERPTHR33971OS06G0232000 PROTEINcoord: 1..349

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G006700.1Lsi02G006700.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0070300 phosphatidic acid binding