Lsi02G006380 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G006380
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	exopolygalacturonase-like
Location	chr02: 5695610 .. 5697303 (-)
RNA-Seq Expression	Lsi02G006380
Synteny	Lsi02G006380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTTTAACAAGTGCATGGAAGGAAGCATGTGCGTCGACCACTCCAAGTAAAGTGTTGATTCCAAAAGGAAGTTATCAATTAAGTCAATCCAACCTTAAAGGCCCTTGTAAAAGTTCTATTGAGCTTCAAATTGACGGGACATTACAAGCTCCAGCTCACCCAAAAGGAGATGGATTGCTCATTTTGGAATATGTTGATCGATTGACATTGTCAGGTACTGGAGTTTTGGATGGCCAAGGAAAAGGAGGTTGGGAAAAGAATGATTGCCACCTAAAAAAAATATGCACCAAACTTCCCATGGTAAATGCTTAAATTGTAATAGCTTTCTATTTTTGGCCCAATATTCATTTATAATTTAAGAACACATAATCTCAATTTAACATATGCATATTTTAACACGAGGAGTTGTTTTATTTAATAATTTGCATAAAATGATTGCAGAATTTGAAGTTCAATTTCATCACTAATTCAATAGTGAAGGGCATAACTTCATTGGATAGCAAGAACTTCCATATCAATCTTTTGGGCTGCAAGAATCTTACCTTTGACCACGTGACAATTACTGCACCAGAGAATAGTCCCAACACAGATGGAATTCACATAAGCAGCTCAGAAGCGATCAACATTCTCAATACCAAAATCGCAACCGGAGATGATTGTATATCTGTGGGAGATAGCAACAAACAAATAGCCATTAGCGATGTTACTTGCGGACCAGGACATGGAATTAGCATCGGAAGTTTGGGCAAATATAGTAAAGAAAAAGCTGTGGAAGGAGTTACAGTGAAAAAATGCAAATTGATCGGTACTACAAACGGTGTCAGGATCAAAACATGGCCAGATTCTGTCGGCGATTTCACAGCCACTGACATGCATTTTGAAGATATTGAAATGGTTCAAGTCAGCAATCCTATCATCATAGACCAAGAATATTGTCCATGGAACCAGTGCAATCGAAAGGTATGTATTAAAATTAGGCCTACTTAATTCTCAAACTTATTAACATAAAACATATTATTTTAAAAAAGTGCAAGCTTTGACTTATATATATTTCAATAATGTTTTCTTTAACGTTTAGGTTCCTTCAAAGATTAAGATCAGCAAAGTTAGTTTCAAGAATATAAGAGGAACTTCTGCCACTCCAGTCGCAGTCAAACTTGTTTGCAGTAAAAATTTTCCATGTCAAGGTGTAGAAGTTGCTAATATTGACCTCACTTACAGTGGAAACCGTGGGCCGATTACGTCTGAGTGTGCAAATGTGAATCCTACTGTTACTGGAACGCAAAACCCTCGCATATGTGCTAAACCTGCTCCTGTTAATGCTGCTCCATCAACTGACTGAATAAACTTCTAACCCATTTGTAGATGCTATTTTCAAATCTTTTTTGTTTTACCTTTTAAAACTCCTTAGGTAAGCTTCATTTAATTTAATATGCATGCTGTGATCTTGTGCATGCTCTCAATAATTGTATTTCAATATTTCTAAAGAGAAATAATTCTTTGTAGTTAATTACAAAGCTTGAAAGCAATAATGCTTTCTTTAAAGTTTAATTTGTATCTTTTTCATGCGCTAATTTTCTTGTAATTCCATTCTCTGAATGATATCTTGGAGTGGTAAAGAGAGCTCTCAAATTCTTCATCGGTTGTTGATAAATAAAATTGAGGCCTAAGCCTATCAGATTATACAGTTTATT

mRNA sequence

GCTTTAACAAGTGCATGGAAGGAAGCATGTGCGTCGACCACTCCAAGTAAAGTGTTGATTCCAAAAGGAAGTTATCAATTAAGTCAATCCAACCTTAAAGGCCCTTGTAAAAGTTCTATTGAGCTTCAAATTGACGGGACATTACAAGCTCCAGCTCACCCAAAAGGAGATGGATTGCTCATTTTGGAATATGTTGATCGATTGACATTGTCAGGTACTGGAGTTTTGGATGGCCAAGGAAAAGGAGGTTGGGAAAAGAATGATTGCCACCTAAAAAAAATATGCACCAAACTTCCCATGAATTTGAAGTTCAATTTCATCACTAATTCAATAGTGAAGGGCATAACTTCATTGGATAGCAAGAACTTCCATATCAATCTTTTGGGCTGCAAGAATCTTACCTTTGACCACGTGACAATTACTGCACCAGAGAATAGTCCCAACACAGATGGAATTCACATAAGCAGCTCAGAAGCGATCAACATTCTCAATACCAAAATCGCAACCGGAGATGATTGTATATCTGTGGGAGATAGCAACAAACAAATAGCCATTAGCGATGTTACTTGCGGACCAGGACATGGAATTAGCATCGGAAGTTTGGGCAAATATAGTAAAGAAAAAGCTGTGGAAGGAGTTACAGTGAAAAAATGCAAATTGATCGGTACTACAAACGGTGTCAGGATCAAAACATGGCCAGATTCTGTCGGCGATTTCACAGCCACTGACATGCATTTTGAAGATATTGAAATGGTTCAAGTCAGCAATCCTATCATCATAGACCAAGAATATTGTCCATGGAACCAGTGCAATCGAAAGGTTCCTTCAAAGATTAAGATCAGCAAAGTTAGTTTCAAGAATATAAGAGGAACTTCTGCCACTCCAGTCGCAGTCAAACTTGTTTGCAGTAAAAATTTTCCATGTCAAGGTGTAGAAGTTGCTAATATTGACCTCACTTACAGTGGAAACCGTGGGCCGATTACGTCTGAGTGTGCAAATGTGAATCCTACTGTTACTGGAACGCAAAACCCTCGCATATGTGCTAAACCTGCTCCTGTTAATGCTGCTCCATCAACTGACTGAATAAACTTCTAACCCATTTGTAGATGCTATTTTCAAATCTTTTTTGTTTTACCTTTTAAAACTCCTTAGGTAAGCTTCATTTAATTTAATATGCATGCTGTGATCTTGTGCATGCTCTCAATAATTGTATTTCAATATTTCTAAAGAGAAATAATTCTTTGTAGTTAATTACAAAGCTTGAAAGCAATAATGCTTTCTTTAAAGTTTAATTTGTATCTTTTTCATGCGCTAATTTTCTTGTAATTCCATTCTCTGAATGATATCTTGGAGTGGTAAAGAGAGCTCTCAAATTCTTCATCGGTTGTTGATAAATAAAATTGAGGCCTAAGCCTATCAGATTATACAGTTTATT

Coding sequence (CDS)

GCTTTAACAAGTGCATGGAAGGAAGCATGTGCGTCGACCACTCCAAGTAAAGTGTTGATTCCAAAAGGAAGTTATCAATTAAGTCAATCCAACCTTAAAGGCCCTTGTAAAAGTTCTATTGAGCTTCAAATTGACGGGACATTACAAGCTCCAGCTCACCCAAAAGGAGATGGATTGCTCATTTTGGAATATGTTGATCGATTGACATTGTCAGGTACTGGAGTTTTGGATGGCCAAGGAAAAGGAGGTTGGGAAAAGAATGATTGCCACCTAAAAAAAATATGCACCAAACTTCCCATGAATTTGAAGTTCAATTTCATCACTAATTCAATAGTGAAGGGCATAACTTCATTGGATAGCAAGAACTTCCATATCAATCTTTTGGGCTGCAAGAATCTTACCTTTGACCACGTGACAATTACTGCACCAGAGAATAGTCCCAACACAGATGGAATTCACATAAGCAGCTCAGAAGCGATCAACATTCTCAATACCAAAATCGCAACCGGAGATGATTGTATATCTGTGGGAGATAGCAACAAACAAATAGCCATTAGCGATGTTACTTGCGGACCAGGACATGGAATTAGCATCGGAAGTTTGGGCAAATATAGTAAAGAAAAAGCTGTGGAAGGAGTTACAGTGAAAAAATGCAAATTGATCGGTACTACAAACGGTGTCAGGATCAAAACATGGCCAGATTCTGTCGGCGATTTCACAGCCACTGACATGCATTTTGAAGATATTGAAATGGTTCAAGTCAGCAATCCTATCATCATAGACCAAGAATATTGTCCATGGAACCAGTGCAATCGAAAGGTTCCTTCAAAGATTAAGATCAGCAAAGTTAGTTTCAAGAATATAAGAGGAACTTCTGCCACTCCAGTCGCAGTCAAACTTGTTTGCAGTAAAAATTTTCCATGTCAAGGTGTAGAAGTTGCTAATATTGACCTCACTTACAGTGGAAACCGTGGGCCGATTACGTCTGAGTGTGCAAATGTGAATCCTACTGTTACTGGAACGCAAAACCCTCGCATATGTGCTAAACCTGCTCCTGTTAATGCTGCTCCATCAACTGACTGA

Protein sequence

ALTSAWKEACASTTPSKVLIPKGSYQLSQSNLKGPCKSSIELQIDGTLQAPAHPKGDGLLILEYVDRLTLSGTGVLDGQGKGGWEKNDCHLKKICTKLPMNLKFNFITNSIVKGITSLDSKNFHINLLGCKNLTFDHVTITAPENSPNTDGIHISSSEAINILNTKIATGDDCISVGDSNKQIAISDVTCGPGHGISIGSLGKYSKEKAVEGVTVKKCKLIGTTNGVRIKTWPDSVGDFTATDMHFEDIEMVQVSNPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKLVCSKNFPCQGVEVANIDLTYSGNRGPITSECANVNPTVTGTQNPRICAKPAPVNAAPSTD

Homology

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BLAST of Lsi02G006380 vs. ExPASy Swiss-Prot
Match: P24548 (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 6.2e-122
Identity = 210/355 (59.15%), Postives = 267/355 (75.21%), Query Frame = 0


Query: 1   ALTSAWKEACASTTPSKVLIPKGSYQLSQSNLKGPCKSSIELQIDGTLQAPAHP---KGD 60
           ALT+AWKEACAS +PS +L+PKG++ +    L+GPCKSSI LQ+ GTL+APA P   KG 
Sbjct: 5   ALTTAWKEACASASPSTILVPKGNFAVGLITLEGPCKSSIGLQLQGTLKAPADPSKIKGL 64

Query: 61  GLLILEYVDRLTLSGTGVLDGQGKGGWEKNDCHLK-KICTKLPMNLKFNFITNSIVKGIT 120
           G + L  +D LT+ G GV DGQGK  W +NDCH    IC  L MNL+   +TNSI++ +T
Sbjct: 65  GWINLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSILRDVT 124

Query: 121 SLDSKNFHINLLGCKNLTFDHVTITAPENSPNTDGIHISSSEAINILNTKIATGDDCISV 180
           +LDSKNFH+N++GCKNLTF+   I+A E S NTDGIHI  S+ +NI+NT+I TGDDCIS+
Sbjct: 125 TLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDDCISL 184

Query: 181 GDSNKQIAISDVTCGPGHGISIGSLGKYSKEKAVEGVTVKKCKLIGTTNGVRIKTWPDSV 240
           GD +K I I+++TCGPGHGIS+GSLG+Y  E++V G+ VK C + G+ NGVRIKTWP S 
Sbjct: 185 GDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKTWPKSE 244

Query: 241 GDFTATDMHFEDIEMVQVSNPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPV 300
               A++MHF+DI M  V  PI+IDQ YCP+NQC  +VPS +K+SK+SFKNI+GTS T  
Sbjct: 245 PG-EASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKLSKISFKNIKGTSTTKE 304

Query: 301 AVKLVCSKNFPCQGVEVANIDLTYSGNRGPITSECANVNPTVTGTQNPRICAKPA 352
           AVKLVCSK+FPC GVE+A+IDLTYSG  GP TS C N+ PT+ G Q P IC+  A
Sbjct: 305 AVKLVCSKSFPCNGVELADIDLTYSGKGGPATSVCENIKPTIKGKQIPAICSGSA 358

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BLAST of Lsi02G006380 vs. ExPASy Swiss-Prot
Match: Q40312 (Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 6.0e-117
Identity = 211/368 (57.34%), Postives = 265/368 (72.01%), Query Frame = 0


Query: 1   ALTSAWKEACASTTPSKVLIPKGSYQLSQSNLKGPCKSSIELQIDGTLQAPAHP---KG- 60
           ALTSAW EACASTT +K++IP G+YQL+   LKGPCK+ IELQ+DGT+QAPA P   KG 
Sbjct: 41  ALTSAWNEACASTTAAKIVIPAGTYQLNGIELKGPCKAPIELQVDGTIQAPADPSVIKGT 100

Query: 61  DGLLILEYVDRLTLSGTGVLDGQGKGGWEK----NDCHLKKICTKLPMNLKFNFITNSIV 120
           +      Y+D LTLSG GV DGQG   ++K    +    K   +K+ MN  FNF+ NSIV
Sbjct: 101 EQWFKFLYMDHLTLSGKGVFDGQGATVYKKAAPASAWSGKNSNSKVFMNFGFNFVNNSIV 160

Query: 121 KGITSLDSKNFHINLLGCKNLTFDHVTITAPENSPNTDGIHISSSEAINILNTKIATGDD 180
           +G+TS DSKNFH+ + GCKN+TFD  TITAP +SPNTDGIH+  S  + ILNT I TGDD
Sbjct: 161 RGVTSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHMGKSTDVKILNTNIGTGDD 220

Query: 181 CISVGDSNKQIAISDVTCGPGHGISIGSLGKYSKEKAVEGVTVKKCKLIGTTNGVRIKTW 240
           C+S+GD +KQI +  V CGPGHG+S+GSLGK++ E+ VEG+TVK C L  T NGVRIKTW
Sbjct: 221 CVSIGDGSKQITVQGVNCGPGHGLSVGSLGKFTTEENVEGITVKNCTLTATDNGVRIKTW 280

Query: 241 PDSVGDFTATDMHFEDIEMVQVSNPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTS 300
           PD+ G  T +D+HFEDI M  V NP+IIDQEY PWNQC++K PSKIK+SK+SFKN++GTS
Sbjct: 281 PDAPGTITVSDIHFEDITMTNVKNPVIIDQEYYPWNQCSKKNPSKIKLSKISFKNVKGTS 340

Query: 301 ATPVAVKLVCSKNFPCQGVEVANIDLTYSGNRGPITSECANVNPTVTGTQNPRICAKP-A 360
            T   V L+CS   PC GVE+ N+DL ++G   P T++C NV P VTGT    +C  P A
Sbjct: 341 GTAEGVVLICSSAVPCDGVELNNVDLKFNG--APTTAKCTNVKPLVTGT--APVCQAPGA 400

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BLAST of Lsi02G006380 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 1.4e-110
Identity = 185/351 (52.71%), Postives = 251/351 (71.51%), Query Frame = 0


Query: 5   AWKEACASTTPSKVLIPKGSYQLSQSNLKGPCKSSIELQIDGTLQAPAHP---KGDGLLI 64
           AWKEACAS TPS V+IPKG+Y LS+ NL+GPCK+ IE+ + GT+QAPA P   K    + 
Sbjct: 52  AWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWVR 111

Query: 65  LEYVDRLTLSGTGVLDGQGKGGWEKNDCHLKKICTKLPMNLKFNFITNSIVKGITSLDSK 124
              V+   + G G+ DGQG   +EKN C  ++  +KLP+N++F+F+TN++++ ITS DSK
Sbjct: 112 FYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFLTNALIQDITSKDSK 171

Query: 125 NFHINLLGCKNLTFDHVTITAPENSPNTDGIHISSSEAINILNTKIATGDDCISVGDSNK 184
            FHIN+  CKN+T + + I AP+ SPNTDGIH+  SE +NI+ + I TGDDCIS+GD  K
Sbjct: 172 LFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTK 231

Query: 185 QIAISDVTCGPGHGISIGSLGKYSKEKAVEGVTVKKCKLIGTTNGVRIKTWPDSVGDFTA 244
            + I ++TCGPGHGISIGSLGK+  E+ VEG+ +  C +  T+NG RIKTWP   G    
Sbjct: 232 NMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGG-AV 291

Query: 245 TDMHFEDIEMVQVSNPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKLV 304
           +++HFEDI M  VS+PI+IDQ+YCPWN+C +   SK+K+S +SFKNIRGTSA P A+K +
Sbjct: 292 SEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFI 351

Query: 305 CSKNFPCQGVEVANIDLTYSGNRGPITSECANVNPTVTGTQNPRICAKPAP 353
           CS + PCQ VE+A+ID+ ++G   P TS+C NV P  +G  NP  C+ P P
Sbjct: 352 CSGSSPCQNVELADIDIKHNGAE-PATSQCLNVKPITSGKLNPIPCSGPVP 400

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BLAST of Lsi02G006380 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 1.9e-110
Identity = 185/351 (52.71%), Postives = 250/351 (71.23%), Query Frame = 0


Query: 5   AWKEACASTTPSKVLIPKGSYQLSQSNLKGPCKSSIELQIDGTLQAPAHP---KGDGLLI 64
           AWKEACAS TPS V+IPKG+Y LS+ NL+GPCK+ IE+ + GT+QAPA P   K    + 
Sbjct: 52  AWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWVR 111

Query: 65  LEYVDRLTLSGTGVLDGQGKGGWEKNDCHLKKICTKLPMNLKFNFITNSIVKGITSLDSK 124
              V+   + G G+ DGQG   +EKN C  ++  +KLP+N++F+F+TN++++ ITS DSK
Sbjct: 112 FYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFVTNALIQDITSKDSK 171

Query: 125 NFHINLLGCKNLTFDHVTITAPENSPNTDGIHISSSEAINILNTKIATGDDCISVGDSNK 184
            FHIN+  CKN+T + + I AP+ SPNTDGIH+  SE +NI+ + I TGDDCIS+GD  K
Sbjct: 172 LFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTK 231

Query: 185 QIAISDVTCGPGHGISIGSLGKYSKEKAVEGVTVKKCKLIGTTNGVRIKTWPDSVGDFTA 244
            + I ++TCGPGHGISIGSLGK+  E+ VEG+ +  C +  T+NG RIKTWP   G    
Sbjct: 232 NMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGG-AV 291

Query: 245 TDMHFEDIEMVQVSNPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKLV 304
           +++HFEDI M  VS+PI+IDQ+YCPWN+C +   SK+K+S +SFKNIRGTSA P A+K +
Sbjct: 292 SEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFI 351

Query: 305 CSKNFPCQGVEVANIDLTYSGNRGPITSECANVNPTVTGTQNPRICAKPAP 353
           CS + PCQ VE+A+ID+ ++G   P TS+C NV P   G  NP  C+ P P
Sbjct: 352 CSGSSPCQNVELADIDIQHNGAE-PATSQCLNVKPITIGKLNPIPCSGPVP 400

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BLAST of Lsi02G006380 vs. ExPASy Swiss-Prot
Match: Q05967 (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 5.5e-110
Identity = 194/354 (54.80%), Postives = 252/354 (71.19%), Query Frame = 0


Query: 1   ALTSAWKEACASTTPSKVLIPKGSYQLSQSNLKGPCKSSIELQIDGTLQAPAHP---KGD 60
           AL +A+KEAC ST+PS ++IPKG++ ++Q  L+GPCKS +ELQI  TL+AP+ P   K  
Sbjct: 43  ALLNAFKEACQSTSPSTIVIPKGTFTMNQVKLEGPCKSPLELQIQATLKAPSDPSQLKVG 102

Query: 61  GLLILEYVDRLTLSGTGVLDGQGKGGWEKNDCHLKKICTKLPMNLKFNFITNSIVKGITS 120
             L +  +D+ T+SG G+LDGQ    WE   C   K C KLP NL FN +TNS +K IT+
Sbjct: 103 EWLTVNKLDQFTMSGGGILDGQAAAAWE---CKQSKKCNKLPNNLSFNSLTNSTIKDITT 162

Query: 121 LDSKNFHINLLGCKNLTFDHVTITAPENSPNTDGIHISSSEAINILNTKIATGDDCISVG 180
           LDSK+FH+N+  CKNLTF    ++AP NSPNTDGIH+S S ++NI ++  +TGDDCISVG
Sbjct: 163 LDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSSSVNITDSNFSTGDDCISVG 222

Query: 181 DSNKQIAISDVTCGPGHGISIGSLGKYSKEKAVEGVTVKKCKLIGTTNGVRIKTWPDSVG 240
           D  +Q+ I+ VTCGPGHGIS+GSLG    EK V GV V+ C    T NGVRIKTWP S  
Sbjct: 223 DETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVRNCTFTNTDNGVRIKTWPAS-H 282

Query: 241 DFTATDMHFEDIEMVQVSNPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVA 300
                D+HFEDI +  VSNP++IDQ YCP+N+CN+ +PS++KISKVSF+NI+GTS T  A
Sbjct: 283 PGVVNDVHFEDIIVQNVSNPVVIDQVYCPFNKCNKDLPSQVKISKVSFQNIKGTSRTQDA 342

Query: 301 VKLVCSKNFPCQGVEVANIDLTYSGNRGPITSECANVNPTVTGTQNPRICAKPA 352
           V L+ SK  PC+G+EV +ID+TYSG  GP  S C N+ P++ G QNP +C   A
Sbjct: 343 VSLLRSKGVPCEGIEVGDIDITYSGKEGPAKSSCENIKPSLKGKQNPPVCTASA 392

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BLAST of Lsi02G006380 vs. ExPASy TrEMBL
Match: A0A5A7ULW5 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G006240 PE=3 SV=1)

HSP 1 Score: 632.5 bits (1630), Expect = 1.1e-177
Identity = 309/360 (85.83%), Postives = 329/360 (91.39%), Query Frame = 0


Query: 1   ALTSAWKEACASTTPSKVLIPKGSYQLSQSNLKGPCKSSIELQIDGTLQAPAHPKGDGLL 60
           AL SAWKE CAS TPSKVLIPKGSY LSQSNLKGPCKSSIELQI+GTLQAP+ PKGDGLL
Sbjct: 46  ALVSAWKEGCASITPSKVLIPKGSYGLSQSNLKGPCKSSIELQIEGTLQAPSDPKGDGLL 105

Query: 61  ILEYVDRLTLSGTGVLDGQGKGGWEKNDCHLKKICTKLPMNLKFNFITNSIVKGITSLDS 120
           ILEYVDRLT+SG GVLDGQGK GWEKNDCHLKKICTKLPMNLK NFITNSIVK ITSLDS
Sbjct: 106 ILEYVDRLTVSGMGVLDGQGKEGWEKNDCHLKKICTKLPMNLKLNFITNSIVKDITSLDS 165

Query: 121 KNFHINLLGCKNLTFDHVTITAPENSPNTDGIHISSSEAINILNTKIATGDDCISVGDSN 180
           KN+HINLLGCKNLTFDHVTITAP +SPNTDGIH+SSSE INILNT IATGDDCISVGD+N
Sbjct: 166 KNYHINLLGCKNLTFDHVTITAPGDSPNTDGIHVSSSEEINILNTNIATGDDCISVGDTN 225

Query: 181 KQIAISDVTCGPGHGISIGSLGKYSKEKAVEGVTVKKCKLIGTTNGVRIKTWPDSVGDFT 240
           KQI ISDVTCGPGHGISIGSLGKYSKEK V GVTVKKCKL  TTNGVRIKTWPDSVG F 
Sbjct: 226 KQIVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTSTTNGVRIKTWPDSVGTFP 285

Query: 241 ATDMHFEDIEMVQVSNPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL 300
           A+DMHFEDIEMV VSNP+IIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVK+
Sbjct: 286 ASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKI 345

Query: 301 VCSKNFPCQGVEVANIDLTYSGNRGPITSECANVNPTVTGTQNPRICAKPAPVNAAPSTD 360
           VCSK+ PC+ VEVA+IDLTYSG+ GPI S+CANV P ++G QNP IC +PAP++  PSTD
Sbjct: 346 VCSKSNPCEEVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPLD-GPSTD 404

[Close]

BLAST of Lsi02G006380 vs. ExPASy TrEMBL
Match: A0A1S3B3X5 (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103485719 PE=3 SV=1)

HSP 1 Score: 632.5 bits (1630), Expect = 1.1e-177
Identity = 309/360 (85.83%), Postives = 329/360 (91.39%), Query Frame = 0


Query: 1   ALTSAWKEACASTTPSKVLIPKGSYQLSQSNLKGPCKSSIELQIDGTLQAPAHPKGDGLL 60
           AL SAWKE CAS TPSKVLIPKGSY LSQSNLKGPCKSSIELQI+GTLQAP+ PKGDGLL
Sbjct: 46  ALVSAWKEGCASITPSKVLIPKGSYGLSQSNLKGPCKSSIELQIEGTLQAPSDPKGDGLL 105

Query: 61  ILEYVDRLTLSGTGVLDGQGKGGWEKNDCHLKKICTKLPMNLKFNFITNSIVKGITSLDS 120
           ILEYVDRLT+SG GVLDGQGK GWEKNDCHLKKICTKLPMNLK NFITNSIVK ITSLDS
Sbjct: 106 ILEYVDRLTVSGMGVLDGQGKEGWEKNDCHLKKICTKLPMNLKLNFITNSIVKDITSLDS 165

Query: 121 KNFHINLLGCKNLTFDHVTITAPENSPNTDGIHISSSEAINILNTKIATGDDCISVGDSN 180
           KN+HINLLGCKNLTFDHVTITAP +SPNTDGIH+SSSE INILNT IATGDDCISVGD+N
Sbjct: 166 KNYHINLLGCKNLTFDHVTITAPGDSPNTDGIHVSSSEEINILNTNIATGDDCISVGDTN 225

Query: 181 KQIAISDVTCGPGHGISIGSLGKYSKEKAVEGVTVKKCKLIGTTNGVRIKTWPDSVGDFT 240
           KQI ISDVTCGPGHGISIGSLGKYSKEK V GVTVKKCKL  TTNGVRIKTWPDSVG F 
Sbjct: 226 KQIVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTSTTNGVRIKTWPDSVGTFP 285

Query: 241 ATDMHFEDIEMVQVSNPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL 300
           A+DMHFEDIEMV VSNP+IIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVK+
Sbjct: 286 ASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKI 345

Query: 301 VCSKNFPCQGVEVANIDLTYSGNRGPITSECANVNPTVTGTQNPRICAKPAPVNAAPSTD 360
           VCSK+ PC+ VEVA+IDLTYSG+ GPI S+CANV P ++G QNP IC +PAP++  PSTD
Sbjct: 346 VCSKSNPCEEVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPLD-GPSTD 404

[Close]

BLAST of Lsi02G006380 vs. ExPASy TrEMBL
Match: A0A5A7TRZ0 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00600 PE=3 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 4.6e-176
Identity = 304/360 (84.44%), Postives = 327/360 (90.83%), Query Frame = 0


Query: 1   ALTSAWKEACASTTPSKVLIPKGSYQLSQSNLKGPCKSSIELQIDGTLQAPAHPKGDGLL 60
           AL SAWKEACASTTPSKVLIPKGSY LSQSNLKGPCKS+IELQI+GTLQAPA PKGDGLL
Sbjct: 46  ALASAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKGDGLL 105

Query: 61  ILEYVDRLTLSGTGVLDGQGKGGWEKNDCHLKKICTKLPMNLKFNFITNSIVKGITSLDS 120
           +LEYVD+LT+SGTGVLDGQGK GWEKNDCHLKK CTKLPMNLK NF+TNSIVK ITSLDS
Sbjct: 106 LLEYVDQLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVKDITSLDS 165

Query: 121 KNFHINLLGCKNLTFDHVTITAPENSPNTDGIHISSSEAINILNTKIATGDDCISVGDSN 180
           KN+HINLLGCKNLTFDHVTITAP NSPNTDGIH+SSSE INILNT IATGDDCISVGD+N
Sbjct: 166 KNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTN 225

Query: 181 KQIAISDVTCGPGHGISIGSLGKYSKEKAVEGVTVKKCKLIGTTNGVRIKTWPDSVGDFT 240
           KQ+ ISDVTCGPGHGISIGSLGKYSKEK V GVTVKKCKL  TTNGVRIKTWPDS   F 
Sbjct: 226 KQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWPDSAVAFP 285

Query: 241 ATDMHFEDIEMVQVSNPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL 300
           A+DMHFEDIEMV VSNP+IIDQEYCPWNQCNRKVPSKIKIS VSFKNIRGTSATPVAVK+
Sbjct: 286 ASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAVKI 345

Query: 301 VCSKNFPCQGVEVANIDLTYSGNRGPITSECANVNPTVTGTQNPRICAKPAPVNAAPSTD 360
           VCS++ PC+GVEVA+IDLTYSG+ GPI S+CANV P ++G QNP IC +PAP    PS+D
Sbjct: 346 VCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPA-GGPSSD 404

[Close]

BLAST of Lsi02G006380 vs. ExPASy TrEMBL
Match: A0A5D3DYI3 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00050 PE=3 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 4.6e-176
Identity = 304/360 (84.44%), Postives = 327/360 (90.83%), Query Frame = 0


Query: 1   ALTSAWKEACASTTPSKVLIPKGSYQLSQSNLKGPCKSSIELQIDGTLQAPAHPKGDGLL 60
           AL SAWKEACASTTPSKVLIPKGSY LSQSNLKGPCKS+IELQI+GTLQAPA PKGDGLL
Sbjct: 46  ALVSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKGDGLL 105

Query: 61  ILEYVDRLTLSGTGVLDGQGKGGWEKNDCHLKKICTKLPMNLKFNFITNSIVKGITSLDS 120
           +LEYVD+LT+SGTGVLDGQGK GWEKNDCHLKK CTKLPMNLK NF+TNSIVK ITSLDS
Sbjct: 106 LLEYVDQLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVKDITSLDS 165

Query: 121 KNFHINLLGCKNLTFDHVTITAPENSPNTDGIHISSSEAINILNTKIATGDDCISVGDSN 180
           KN+HINLLGCKNLTFDHVTITAP NSPNTDGIH+SSSE INILNT IATGDDCISVGD+N
Sbjct: 166 KNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTN 225

Query: 181 KQIAISDVTCGPGHGISIGSLGKYSKEKAVEGVTVKKCKLIGTTNGVRIKTWPDSVGDFT 240
           KQ+ ISDVTCGPGHGISIGSLGKYSKEK V GVTVKKCKL  TTNGVRIKTWPDS   F 
Sbjct: 226 KQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWPDSAVAFP 285

Query: 241 ATDMHFEDIEMVQVSNPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL 300
           A+DMHFEDIEMV VSNP+IIDQEYCPWNQCNRKVPSKIKIS VSFKNIRGTSATPVAVK+
Sbjct: 286 ASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAVKI 345

Query: 301 VCSKNFPCQGVEVANIDLTYSGNRGPITSECANVNPTVTGTQNPRICAKPAPVNAAPSTD 360
           VCS++ PC+GVEVA+IDLTYSG+ GPI S+CANV P ++G QNP IC +PAP    PS+D
Sbjct: 346 VCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPA-GGPSSD 404

[Close]

BLAST of Lsi02G006380 vs. ExPASy TrEMBL
Match: A0A5D3BWP4 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00550 PE=3 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 4.6e-176
Identity = 304/360 (84.44%), Postives = 327/360 (90.83%), Query Frame = 0


Query: 1   ALTSAWKEACASTTPSKVLIPKGSYQLSQSNLKGPCKSSIELQIDGTLQAPAHPKGDGLL 60
           AL SAWKEACASTTPSKVLIPKGSY LSQSNLKGPCKS+IELQI+GTLQAPA PKGDGLL
Sbjct: 46  ALASAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKGDGLL 105

Query: 61  ILEYVDRLTLSGTGVLDGQGKGGWEKNDCHLKKICTKLPMNLKFNFITNSIVKGITSLDS 120
           +LEYVD+LT+SGTGVLDGQGK GWEKNDCHLKK CTKLPMNLK NF+TNSIVK ITSLDS
Sbjct: 106 LLEYVDQLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVKDITSLDS 165

Query: 121 KNFHINLLGCKNLTFDHVTITAPENSPNTDGIHISSSEAINILNTKIATGDDCISVGDSN 180
           KN+HINLLGCKNLTFDHVTITAP NSPNTDGIH+SSSE INILNT IATGDDCISVGD+N
Sbjct: 166 KNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTN 225

Query: 181 KQIAISDVTCGPGHGISIGSLGKYSKEKAVEGVTVKKCKLIGTTNGVRIKTWPDSVGDFT 240
           KQ+ ISDVTCGPGHGISIGSLGKYSKEK V GVTVKKCKL  TTNGVRIKTWPDS   F 
Sbjct: 226 KQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWPDSAVAFP 285

Query: 241 ATDMHFEDIEMVQVSNPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL 300
           A+DMHFEDIEMV VSNP+IIDQEYCPWNQCNRKVPSKIKIS VSFKNIRGTSATPVAVK+
Sbjct: 286 ASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAVKI 345

Query: 301 VCSKNFPCQGVEVANIDLTYSGNRGPITSECANVNPTVTGTQNPRICAKPAPVNAAPSTD 360
           VCS++ PC+GVEVA+IDLTYSG+ GPI S+CANV P ++G QNP IC +PAP    PS+D
Sbjct: 346 VCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPA-GGPSSD 404

[Close]

BLAST of Lsi02G006380 vs. NCBI nr
Match: XP_038895545.1 (exopolygalacturonase-like [Benincasa hispida])

HSP 1 Score: 651.4 bits (1679), Expect = 4.7e-183
Identity = 318/360 (88.33%), Postives = 339/360 (94.17%), Query Frame = 0


Query: 1   ALTSAWKEACASTTPSKVLIPKGSYQLSQSNLKGPCKSSIELQIDGTLQAPAHPKGDGLL 60
           AL  AWK ACASTTPSKVLIPK SY+LSQSNL GPCKSSIE QI+GTLQAPA PKGDGLL
Sbjct: 48  ALAIAWKTACASTTPSKVLIPKESYKLSQSNLNGPCKSSIEFQIEGTLQAPADPKGDGLL 107

Query: 61  ILEYVDRLTLSGTGVLDGQGKGGWEKNDCHLKKICTKLPMNLKFNFITNSIVKGITSLDS 120
           ILEYVD+LT+SGTGVLDGQGK GWEKNDCHLKKICTKLPMNLKFNFITNSIVK ITSLDS
Sbjct: 108 ILEYVDQLTMSGTGVLDGQGKTGWEKNDCHLKKICTKLPMNLKFNFITNSIVKDITSLDS 167

Query: 121 KNFHINLLGCKNLTFDHVTITAPENSPNTDGIHISSSEAINILNTKIATGDDCISVGDSN 180
           KN+HINLLGCKNLT DHVTITAP+NSPNTDGIH+SSSE INILNTKI TGDDCISVGDSN
Sbjct: 168 KNYHINLLGCKNLTIDHVTITAPDNSPNTDGIHVSSSEGINILNTKIETGDDCISVGDSN 227

Query: 181 KQIAISDVTCGPGHGISIGSLGKYSKEKAVEGVTVKKCKLIGTTNGVRIKTWPDSVGDFT 240
           KQIAISDVTCGPGHGISIGSLGKYSKE+AVEGVTVKKCKLI T+NGVRIKTWPDSVG F 
Sbjct: 228 KQIAISDVTCGPGHGISIGSLGKYSKEQAVEGVTVKKCKLINTSNGVRIKTWPDSVGAFP 287

Query: 241 ATDMHFEDIEMVQVSNPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL 300
           A DMHFEDIEMV VSNPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNI+GTSATPVAVKL
Sbjct: 288 AIDMHFEDIEMVNVSNPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIKGTSATPVAVKL 347

Query: 301 VCSKNFPCQGVEVANIDLTYSGNRGPITSECANVNPTVTGTQNPRICAKPAPVNAAPSTD 360
           VCSK+ PC+GVEVA+IDL+YSG++GPITS+CANVNP V+G QNPRICA+PAP++ APSTD
Sbjct: 348 VCSKSVPCEGVEVADIDLSYSGSQGPITSQCANVNPIVSGKQNPRICAEPAPID-APSTD 406

[Close]

BLAST of Lsi02G006380 vs. NCBI nr
Match: XP_008441641.1 (PREDICTED: exopolygalacturonase-like [Cucumis melo] >KAA0056903.1 exopolygalacturonase-like [Cucumis melo var. makuwa] >TYJ99406.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 632.5 bits (1630), Expect = 2.2e-177
Identity = 309/360 (85.83%), Postives = 329/360 (91.39%), Query Frame = 0


Query: 1   ALTSAWKEACASTTPSKVLIPKGSYQLSQSNLKGPCKSSIELQIDGTLQAPAHPKGDGLL 60
           AL SAWKE CAS TPSKVLIPKGSY LSQSNLKGPCKSSIELQI+GTLQAP+ PKGDGLL
Sbjct: 46  ALVSAWKEGCASITPSKVLIPKGSYGLSQSNLKGPCKSSIELQIEGTLQAPSDPKGDGLL 105

Query: 61  ILEYVDRLTLSGTGVLDGQGKGGWEKNDCHLKKICTKLPMNLKFNFITNSIVKGITSLDS 120
           ILEYVDRLT+SG GVLDGQGK GWEKNDCHLKKICTKLPMNLK NFITNSIVK ITSLDS
Sbjct: 106 ILEYVDRLTVSGMGVLDGQGKEGWEKNDCHLKKICTKLPMNLKLNFITNSIVKDITSLDS 165

Query: 121 KNFHINLLGCKNLTFDHVTITAPENSPNTDGIHISSSEAINILNTKIATGDDCISVGDSN 180
           KN+HINLLGCKNLTFDHVTITAP +SPNTDGIH+SSSE INILNT IATGDDCISVGD+N
Sbjct: 166 KNYHINLLGCKNLTFDHVTITAPGDSPNTDGIHVSSSEEINILNTNIATGDDCISVGDTN 225

Query: 181 KQIAISDVTCGPGHGISIGSLGKYSKEKAVEGVTVKKCKLIGTTNGVRIKTWPDSVGDFT 240
           KQI ISDVTCGPGHGISIGSLGKYSKEK V GVTVKKCKL  TTNGVRIKTWPDSVG F 
Sbjct: 226 KQIVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTSTTNGVRIKTWPDSVGTFP 285

Query: 241 ATDMHFEDIEMVQVSNPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL 300
           A+DMHFEDIEMV VSNP+IIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVK+
Sbjct: 286 ASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKI 345

Query: 301 VCSKNFPCQGVEVANIDLTYSGNRGPITSECANVNPTVTGTQNPRICAKPAPVNAAPSTD 360
           VCSK+ PC+ VEVA+IDLTYSG+ GPI S+CANV P ++G QNP IC +PAP++  PSTD
Sbjct: 346 VCSKSNPCEEVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPLD-GPSTD 404

[Close]

BLAST of Lsi02G006380 vs. NCBI nr
Match: KAA0045594.1 (exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 627.1 bits (1616), Expect = 9.4e-176
Identity = 304/360 (84.44%), Postives = 327/360 (90.83%), Query Frame = 0


Query: 1   ALTSAWKEACASTTPSKVLIPKGSYQLSQSNLKGPCKSSIELQIDGTLQAPAHPKGDGLL 60
           AL SAWKEACASTTPSKVLIPKGSY LSQSNLKGPCKS+IELQI+GTLQAPA PKGDGLL
Sbjct: 46  ALASAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKGDGLL 105

Query: 61  ILEYVDRLTLSGTGVLDGQGKGGWEKNDCHLKKICTKLPMNLKFNFITNSIVKGITSLDS 120
           +LEYVD+LT+SGTGVLDGQGK GWEKNDCHLKK CTKLPMNLK NF+TNSIVK ITSLDS
Sbjct: 106 LLEYVDQLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVKDITSLDS 165

Query: 121 KNFHINLLGCKNLTFDHVTITAPENSPNTDGIHISSSEAINILNTKIATGDDCISVGDSN 180
           KN+HINLLGCKNLTFDHVTITAP NSPNTDGIH+SSSE INILNT IATGDDCISVGD+N
Sbjct: 166 KNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTN 225

Query: 181 KQIAISDVTCGPGHGISIGSLGKYSKEKAVEGVTVKKCKLIGTTNGVRIKTWPDSVGDFT 240
           KQ+ ISDVTCGPGHGISIGSLGKYSKEK V GVTVKKCKL  TTNGVRIKTWPDS   F 
Sbjct: 226 KQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWPDSAVAFP 285

Query: 241 ATDMHFEDIEMVQVSNPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL 300
           A+DMHFEDIEMV VSNP+IIDQEYCPWNQCNRKVPSKIKIS VSFKNIRGTSATPVAVK+
Sbjct: 286 ASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAVKI 345

Query: 301 VCSKNFPCQGVEVANIDLTYSGNRGPITSECANVNPTVTGTQNPRICAKPAPVNAAPSTD 360
           VCS++ PC+GVEVA+IDLTYSG+ GPI S+CANV P ++G QNP IC +PAP    PS+D
Sbjct: 346 VCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPA-GGPSSD 404

[Close]

BLAST of Lsi02G006380 vs. NCBI nr
Match: XP_016903689.1 (PREDICTED: exopolygalacturonase-like, partial [Cucumis melo])

HSP 1 Score: 627.1 bits (1616), Expect = 9.4e-176
Identity = 304/360 (84.44%), Postives = 327/360 (90.83%), Query Frame = 0


Query: 1   ALTSAWKEACASTTPSKVLIPKGSYQLSQSNLKGPCKSSIELQIDGTLQAPAHPKGDGLL 60
           AL SAWKEACASTTPSKVLIPKGSY LSQSNLKGPCKS+IELQI+GTLQAPA PKGDGLL
Sbjct: 1   ALASAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKGDGLL 60

Query: 61  ILEYVDRLTLSGTGVLDGQGKGGWEKNDCHLKKICTKLPMNLKFNFITNSIVKGITSLDS 120
           +LEYVD+LT+SGTGVLDGQGK GWEKNDCHLKK CTKLPMNLK NF+TNSIVK ITSLDS
Sbjct: 61  LLEYVDQLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVKDITSLDS 120

Query: 121 KNFHINLLGCKNLTFDHVTITAPENSPNTDGIHISSSEAINILNTKIATGDDCISVGDSN 180
           KN+HINLLGCKNLTFDHVTITAP NSPNTDGIH+SSSE INILNT IATGDDCISVGD+N
Sbjct: 121 KNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTN 180

Query: 181 KQIAISDVTCGPGHGISIGSLGKYSKEKAVEGVTVKKCKLIGTTNGVRIKTWPDSVGDFT 240
           KQ+ ISDVTCGPGHGISIGSLGKYSKEK V GVTVKKCKL  TTNGVRIKTWPDS   F 
Sbjct: 181 KQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWPDSAVAFP 240

Query: 241 ATDMHFEDIEMVQVSNPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL 300
           A+DMHFEDIEMV VSNP+IIDQEYCPWNQCNRKVPSKIKIS VSFKNIRGTSATPVAVK+
Sbjct: 241 ASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAVKI 300

Query: 301 VCSKNFPCQGVEVANIDLTYSGNRGPITSECANVNPTVTGTQNPRICAKPAPVNAAPSTD 360
           VCS++ PC+GVEVA+IDLTYSG+ GPI S+CANV P ++G QNP IC +PAP    PS+D
Sbjct: 301 VCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPA-GGPSSD 359

[Close]

BLAST of Lsi02G006380 vs. NCBI nr
Match: KAA0045610.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK02646.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 627.1 bits (1616), Expect = 9.4e-176
Identity = 304/360 (84.44%), Postives = 327/360 (90.83%), Query Frame = 0


Query: 1   ALTSAWKEACASTTPSKVLIPKGSYQLSQSNLKGPCKSSIELQIDGTLQAPAHPKGDGLL 60
           AL SAWKEACASTTPSKVLIPKGSY LSQSNLKGPCKS+IELQI+GTLQAPA PKGDGLL
Sbjct: 46  ALASAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKGDGLL 105

Query: 61  ILEYVDRLTLSGTGVLDGQGKGGWEKNDCHLKKICTKLPMNLKFNFITNSIVKGITSLDS 120
           +LEYVD+LT+SGTGVLDGQGK GWEKNDCHLKK CTKLPMNLK NF+TNSIVK ITSLDS
Sbjct: 106 LLEYVDQLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVKDITSLDS 165

Query: 121 KNFHINLLGCKNLTFDHVTITAPENSPNTDGIHISSSEAINILNTKIATGDDCISVGDSN 180
           KN+HINLLGCKNLTFDHVTITAP NSPNTDGIH+SSSE INILNT IATGDDCISVGD+N
Sbjct: 166 KNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTN 225

Query: 181 KQIAISDVTCGPGHGISIGSLGKYSKEKAVEGVTVKKCKLIGTTNGVRIKTWPDSVGDFT 240
           KQ+ ISDVTCGPGHGISIGSLGKYSKEK V GVTVKKCKL  TTNGVRIKTWPDS   F 
Sbjct: 226 KQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWPDSAVAFP 285

Query: 241 ATDMHFEDIEMVQVSNPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL 300
           A+DMHFEDIEMV VSNP+IIDQEYCPWNQCNRKVPSKIKIS VSFKNIRGTSATPVAVK+
Sbjct: 286 ASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAVKI 345

Query: 301 VCSKNFPCQGVEVANIDLTYSGNRGPITSECANVNPTVTGTQNPRICAKPAPVNAAPSTD 360
           VCS++ PC+GVEVA+IDLTYSG+ GPI S+CANV P ++G QNP IC +PAP    PS+D
Sbjct: 346 VCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPA-GGPSSD 404

[Close]

BLAST of Lsi02G006380 vs. TAIR 10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 399.1 bits (1024), Expect = 3.9e-111
Identity = 183/353 (51.84%), Postives = 254/353 (71.95%), Query Frame = 0


Query: 1   ALTSAWKEACASTTPSKVLIPKGSYQLSQSNLKGPCKSSIELQIDGTLQAP--AHPKGDG 60
           AL  A+  AC S++PSKV+IPKG ++L +  ++GPCK+ IE+ + GT++A   A    + 
Sbjct: 38  ALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAIQGKEK 97

Query: 61  LLILEYVDRLTLSGTGVLDGQGKGGWEKNDCHLKKICTKLPMNLKFNFITNSIVKGITSL 120
            ++   +D   L+G G  DG+G   W  N+CH    C KLP++++F+FI NS ++ I+S+
Sbjct: 98  WVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIRDISSI 157

Query: 121 DSKNFHINLLGCKNLTFDHVTITAPENSPNTDGIHISSSEAINILNTKIATGDDCISVGD 180
           D+KNFHIN+LG KN+T +++ I APE+SPNTDGIH+  S+ + ILN+ I+TGDDCISVGD
Sbjct: 158 DAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDCISVGD 217

Query: 181 SNKQIAISDVTCGPGHGISIGSLGKYSKEKAVEGVTVKKCKLIGTTNGVRIKTWPDSVGD 240
             K + +  VTCGPGHGIS+GSLG+Y  E+ V G+ V  C L  T NG+RIKTWP +   
Sbjct: 218 GMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWPSAACS 277

Query: 241 FTATDMHFEDIEMVQVSNPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAV 300
            TA+D+HFEDI +  VSNPI+IDQEYCPWNQCN++  S IK+  +SFKNIRGTS    AV
Sbjct: 278 TTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSGNKDAV 337

Query: 301 KLVCSKNFPCQGVEVANIDLTYSGNRGPITSECANVNPTVTGTQNPRICAKPA 352
           KL+CSK +PCQ VE+ +ID+ Y+G  GP T  C+NV+P + G+Q+P+ C+ PA
Sbjct: 338 KLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQSPKACSAPA 390

[Close]

BLAST of Lsi02G006380 vs. TAIR 10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 392.9 bits (1008), Expect = 2.8e-109
Identity = 187/359 (52.09%), Postives = 252/359 (70.19%), Query Frame = 0


Query: 1   ALTSAWKEACASTTPSKVLIPKGSYQLSQSNLKGPCKSSIELQIDGTLQA--PAHPKGDG 60
           AL  A+  AC + T SKV+I KG ++L +  + GPCK+ +E+ + GTL+A   A    + 
Sbjct: 39  ALLKAFTSACQAPTASKVVITKGEFKLGEIEMTGPCKAPVEINLQGTLKADGKAIQGKER 98

Query: 61  LLILEYVDRLTLSGTGVLDGQGKGGWEKNDCHLKKICTKLPMNLKFNFITNSIVKGITSL 120
            ++   ++   L+G G+ DG+G   W  N+CH    C KLP++++F+F+ N+ ++ I+S+
Sbjct: 99  WVVFLRINGFKLNGGGIFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVENAEIRDISSI 158

Query: 121 DSKNFHINLLGCKNLTFDHVTITAPENSPNTDGIHISSSEAINILNTKIATGDDCISVGD 180
           D+KNFHIN+LG KN+TFD+V + AP  SPNTDGIH+  SE + ILN+KIATGDDCISVGD
Sbjct: 159 DAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGVKILNSKIATGDDCISVGD 218

Query: 181 SNKQIAISDVTCGPGHGISIGSLGKYSKEKAVEGVTVKKCKLIGTTNGVRIKTWPDSVGD 240
             K + + +V CGPGHGIS+GSLG+Y  E+ V G+TV  C L GT NG+RIKTWP +   
Sbjct: 219 GMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTLQGTDNGLRIKTWPSAACA 278

Query: 241 FTATDMHFEDIEMVQVSNPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAV 300
            TA+ +HFE+I +  VSNPI+IDQEYCPWNQCN++ PS IK+  +SFKNIRGTS    AV
Sbjct: 279 TTASGIHFENIILNNVSNPILIDQEYCPWNQCNKQKPSTIKLVDISFKNIRGTSGNKDAV 338

Query: 301 KLVCSKNFPCQGVEVANIDLTYSGNRGPITSECANVNPTVTGTQNPRIC-AKPAPVNAA 357
           KL+CSK  PC  VE+ NI+L Y G  GP T  C+NV+P + GTQNP+ C A P P  AA
Sbjct: 339 KLLCSKAHPCANVEIGNINLEYKGADGPPTFMCSNVSPKLVGTQNPKACSAGPTPKTAA 397

[Close]

BLAST of Lsi02G006380 vs. TAIR 10
Match: AT5G48140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 392.1 bits (1006), Expect = 4.8e-109
Identity = 180/351 (51.28%), Postives = 251/351 (71.51%), Query Frame = 0


Query: 1   ALTSAWKEACASTTPSKVLIPKGSYQLSQSNLKGPCKSSIELQIDGTLQAPAHPKG-DGL 60
           AL  A+ EAC   T S V+IPKG Y+L +  + GPCK+ I + + GT++A  +  G +  
Sbjct: 39  ALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCKAPIRIALLGTVKADGNANGKEKW 98

Query: 61  LILEYVDRLTLSGTGVLDGQGKGGWEKNDCHLKKICTKLPMNLKFNFITNSIVKGITSLD 120
           +    ++   L+G GV DG+G   W  N+CH    C KLP++++F+F+T++ ++GITSLD
Sbjct: 99  VAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLPISIRFDFVTDAKIRGITSLD 158

Query: 121 SKNFHINLLGCKNLTFDHVTITAPENSPNTDGIHISSSEAINILNTKIATGDDCISVGDS 180
           +K+FHIN++G KN+TF+ V I AP  SPNTDGIH+  S+ I I+N+ I+TGDDC+SVGD 
Sbjct: 159 AKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGDDCVSVGDG 218

Query: 181 NKQIAISDVTCGPGHGISIGSLGKYSKEKAVEGVTVKKCKLIGTTNGVRIKTWPDSVGDF 240
            K + +  VTCGPGHGISIGSLG+YS E+ V G+ +  C L  T NG+RIKTWP +    
Sbjct: 219 MKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGLRIKTWPSAACTT 278

Query: 241 TATDMHFEDIEMVQVSNPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVK 300
           TA+D+HFE+I +  VSNPI+IDQEYCPWNQCN++ PS IK++ +SFK IRGTS    AVK
Sbjct: 279 TASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIKLANISFKKIRGTSGNKDAVK 338

Query: 301 LVCSKNFPCQGVEVANIDLTYSGNRGPITSECANVNPTVTGTQNPRICAKP 351
           L+CSK +PCQ VEV ++++ Y+G  GP T +C+NV+P + GTQ P+ C+ P
Sbjct: 339 LLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVSPKLVGTQIPKACSSP 389

[Close]

BLAST of Lsi02G006380 vs. TAIR 10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 379.0 bits (972), Expect = 4.2e-105
Identity = 177/360 (49.17%), Postives = 251/360 (69.72%), Query Frame = 0


Query: 1   ALTSAWKEACASTTPSKVLIPKGSYQLSQSNLKGPCKSSIELQIDGTLQAPA---HPKGD 60
           AL  A+  AC S TP KV+IPKG ++L +  + GPCKS +E+ + GT+ A     H K +
Sbjct: 39  ALLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCKSPVEITLLGTVLADGNSIHGK-E 98

Query: 61  GLLILEYVDRLTLSGTGVLDGQGKGGWEKNDCHLKKICTKLPMNLKFNFITNSIVKGITS 120
             ++ + +D   L+G G  DG+G   W  N+CH    C KLP++++F+F+TN+ ++ I+S
Sbjct: 99  KWVVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVTNAEIRDISS 158

Query: 121 LDSKNFHINLLGCKNLTFDHVTITAPENSPNTDGIHISSSEAINILNTKIATGDDCISVG 180
           +D+KNFHIN++G KN+TFD+V I AP  SPNTDGIH+  S  ++I+N++I+TGDDC+SVG
Sbjct: 159 IDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRISTGDDCVSVG 218

Query: 181 DSNKQIAISDVTCGPGHGISIGSLGKYSKEKAVEGVTVKKCKLIGTTNGVRIKTWPDSVG 240
           D    + + +V CGPGHGIS+GSLG+Y  E+ V G+ V  C L  T NG+RIKTWP +  
Sbjct: 219 DGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTLQETDNGLRIKTWPSAAC 278

Query: 241 DFTATDMHFEDIEMVQVSNPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVA 300
             TA+++HFE+I +  VSNPI+IDQEYCPWNQCN++  S IK++ +SF+ IRGTS    A
Sbjct: 279 STTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSSIKLANISFRRIRGTSGNKDA 338

Query: 301 VKLVCSKNFPCQGVEVANIDLTYSGNRGPITSECANVNPTVTGTQNPRICAKPAPVNAAP 358
           VKL+CSK +PC+ V+V +I++ Y+G  GP T  C+NV P + GTQ P+ C  P PV   P
Sbjct: 339 VKLLCSKGYPCENVQVGDINIQYTGADGPATFMCSNVRPKLVGTQFPKACNTP-PVLTQP 396

[Close]

BLAST of Lsi02G006380 vs. TAIR 10
Match: AT3G14040.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 350.5 bits (898), Expect = 1.6e-96
Identity = 173/360 (48.06%), Postives = 234/360 (65.00%), Query Frame = 0


Query: 1   ALTSAWKEACASTTPSKVLIPKGSYQLSQSNLKGPCKSSIELQIDGTLQAPAHPKGD--- 60
           A  +AWKEACA+   S + +PKG Y +     KGPCK  + L+++G  +APA  K     
Sbjct: 89  AFAAAWKEACAA--GSTITVPKGEYLVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPH 148

Query: 61  -GLLILEYVDRLTLSGT-GVLDGQGKGGWEKNDCHLKKICTKLPMNLKFNFITNSIVKGI 120
            G +  E +   TL+G   + DGQG   W+ NDC     C  LP+N++F  +TNS +  I
Sbjct: 149 AGWIDFENLADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSI 208

Query: 121 TSLDSKNFHINLLGCKNLTFDHVTITAPENSPNTDGIHISSSEAINILNTKIATGDDCIS 180
           TS +SK FH+N+L CKN+T   + I AP  S NTDGIHI  S  +N++  KI TGDDC+S
Sbjct: 209 TSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVS 268

Query: 181 VGDSNKQIAISDVTCGPGHGISIGSLGKYSKEKAVEGVTVKKCKLIGTTNGVRIKTWPDS 240
           +GD  + + + +V CGPGHGISIGSLG+Y  E+ V+GVTV+KC +  T NGVRIKTWP S
Sbjct: 269 IGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGS 328

Query: 241 VGDFTATDMHFEDIEMVQVSNPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATP 300
                A+++ FEDI M  VS P++IDQEYCP+  C   VPSK+K+S V+ KNI+GTSAT 
Sbjct: 329 PPGI-ASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATK 388

Query: 301 VAVKLVCSKNFPCQGVEVANIDLTYSGNRGPITSECANVNPTVTGTQNPRIC---AKPAP 353
           VAVKL+CSK  PC  + +++I+L ++G  GP  S C+N+ P ++G   P  C   AKP P
Sbjct: 389 VAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAACTEVAKPGP 445

The following BLAST results are available for this feature:

BLAST of Lsi02G006380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P24548	6.2e-122	59.15	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]
Q40312	6.0e-117	57.34	Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1	[more]
Q39786	1.4e-110	52.71	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]
Q39766	1.9e-110	52.71	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]
Q05967	5.5e-110	54.80	Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1	[more]

BLAST of Lsi02G006380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7ULW5	1.1e-177	85.83	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3B3X5	1.1e-177	85.83	exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103485719 PE=3 SV=1	[more]
A0A5A7TRZ0	4.6e-176	84.44	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5D3DYI3	4.6e-176	84.44	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5D3BWP4	4.6e-176	84.44	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of Lsi02G006380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895545.1	4.7e-183	88.33	exopolygalacturonase-like [Benincasa hispida]	[more]
XP_008441641.1	2.2e-177	85.83	PREDICTED: exopolygalacturonase-like [Cucumis melo] >KAA0056903.1 exopolygalactu...	[more]
KAA0045594.1	9.4e-176	84.44	exopolygalacturonase-like [Cucumis melo var. makuwa]	[more]
XP_016903689.1	9.4e-176	84.44	PREDICTED: exopolygalacturonase-like, partial [Cucumis melo]	[more]
KAA0045610.1	9.4e-176	84.44	exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK02646.1 exopolygalactur...	[more]

BLAST of Lsi02G006380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07820.1	3.9e-111	51.84	Pectin lyase-like superfamily protein	[more]
AT3G07840.1	2.8e-109	52.09	Pectin lyase-like superfamily protein	[more]
AT5G48140.1	4.8e-109	51.28	Pectin lyase-like superfamily protein	[more]
AT3G07830.1	4.2e-105	49.17	Pectin lyase-like superfamily protein	[more]
AT3G14040.1	1.6e-96	48.06	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 157..178 e-value: 2900.0 score: 3.9 coord: 130..156 e-value: 16.0 score: 14.4 coord: 210..231 e-value: 13.0 score: 14.7
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 1..358 e-value: 1.4E-99 score: 335.9
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 10..336 e-value: 3.9E-102 score: 341.6
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 187..200
None	No IPR available	PANTHER	PTHR31375:SF248	POLYGALACTURONASE	coord: 2..351
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 2..351
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 1..348

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G006380.1	Lsi02G006380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity