Lsi02G006090 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G006090
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	15.4 kDa class V heat shock protein
Location	chr02: 5408650 .. 5409504 (+)
RNA-Seq Expression	Lsi02G006090
Synteny	Lsi02G006090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCTGCTGCAACTTGCTAAAAAGATCCAATGTTCTATTTAAAGGTTGGAAGAGCATCTCAAAAACCCTATCCATTCAGTCTCACCGGCCCCGCCAACGAAAAAACCGCGAAACAAAAATCTTCCTTCAAACCTTTCAACAATGGAGATTTCAACTTCTAATCCTTCTTCCCTTCACAACTCATTTCCTTCTCGTCTCCTCTTTCCCTACTTCCATTACACCATTCCTCGCAATTACGTTCACTGGGTACAAACCTCCGATTCTCATCTTTTCTCCGCCGATCTCCCCGGTGCGTTCAATTTTTCCGATTCCTTTCTTCCTCTACGTTTCTCGTGCTCACTGAATTCCTTAACCTTTTTTTTTTCTGGTTCGCTAATATGATGTATAGGTGTTCGTAAGGAGGAGATAAAAGTGGAAGTTGAAGATTCGCGGTACCTGATCATTCGAACGGAGGCCGTGGATGGAGTTACGATTCCGGCGAAGAGCTTCTCCAGGAAGTTTCGCCTTCCGGTAATGGTTGATGTAGATGCGATTTCGGCTGGATTTGAGAATGGAGTTTTGGAGATTACGGTACCTAGGTCTTTCAGAAGAAGCTCTGTTATTCATTCTCCTGATCAACTTCAACTTCTTGCTAGGGCTGCTTGATTTGATTGATCATTTCTGATTCAAGTTTGTTGGCTCTGCCTTCTTTTTTCCCCTTTTGTTGGAAATTTGAATGGATTGTTGCTGCAAATGGCGAAATTTCAAGCTCTGTACTATTAATTTGTCATGAATAGGAAGAATTTATGTATCCATATCAACAAATTGTTGGCTTTAGAACTGTAGAATTGATTTTAATGAATCAGATTTATCTGAA

mRNA sequence

GGCTGCTGCAACTTGCTAAAAAGATCCAATGTTCTATTTAAAGGTTGGAAGAGCATCTCAAAAACCCTATCCATTCAGTCTCACCGGCCCCGCCAACGAAAAAACCGCGAAACAAAAATCTTCCTTCAAACCTTTCAACAATGGAGATTTCAACTTCTAATCCTTCTTCCCTTCACAACTCATTTCCTTCTCGTCTCCTCTTTCCCTACTTCCATTACACCATTCCTCGCAATTACGTTCACTGGGTACAAACCTCCGATTCTCATCTTTTCTCCGCCGATCTCCCCGGTGTTCGTAAGGAGGAGATAAAAGTGGAAGTTGAAGATTCGCGGTACCTGATCATTCGAACGGAGGCCGTGGATGGAGTTACGATTCCGGCGAAGAGCTTCTCCAGGAAGTTTCGCCTTCCGGTAATGGTTGATGTAGATGCGATTTCGGCTGGATTTGAGAATGGAGTTTTGGAGATTACGGTACCTAGGTCTTTCAGAAGAAGCTCTGTTATTCATTCTCCTGATCAACTTCAACTTCTTGCTAGGGCTGCTTGATTTGATTGATCATTTCTGATTCAAGTTTGTTGGCTCTGCCTTCTTTTTTCCCCTTTTGTTGGAAATTTGAATGGATTGTTGCTGCAAATGGCGAAATTTCAAGCTCTGTACTATTAATTTGTCATGAATAGGAAGAATTTATGTATCCATATCAACAAATTGTTGGCTTTAGAACTGTAGAATTGATTTTAATGAATCAGATTTATCTGAA

Coding sequence (CDS)

ATGGAGATTTCAACTTCTAATCCTTCTTCCCTTCACAACTCATTTCCTTCTCGTCTCCTCTTTCCCTACTTCCATTACACCATTCCTCGCAATTACGTTCACTGGGTACAAACCTCCGATTCTCATCTTTTCTCCGCCGATCTCCCCGGTGTTCGTAAGGAGGAGATAAAAGTGGAAGTTGAAGATTCGCGGTACCTGATCATTCGAACGGAGGCCGTGGATGGAGTTACGATTCCGGCGAAGAGCTTCTCCAGGAAGTTTCGCCTTCCGGTAATGGTTGATGTAGATGCGATTTCGGCTGGATTTGAGAATGGAGTTTTGGAGATTACGGTACCTAGGTCTTTCAGAAGAAGCTCTGTTATTCATTCTCCTGATCAACTTCAACTTCTTGCTAGGGCTGCTTGA

Protein sequence

MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPRSFRRSSVIHSPDQLQLLARAA

Homology

[Close]

BLAST of Lsi02G006090 vs. ExPASy Swiss-Prot
Match: O49710 (15.4 kDa class V heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP15.4 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 7.7e-25
Identity = 62/109 (56.88%), Postives = 76/109 (69.72%), Query Frame = 0


Query: 31  NYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEA--VDGVTIPAKSFSRKFR 90
           N+V W Q+ DSH FS DLPG+RKEEIKVE+EDS YLIIRTEA  +     P K+F RKFR
Sbjct: 26  NHVRWSQSPDSHTFSVDLPGLRKEEIKVEIEDSIYLIIRTEATPMSPPDQPLKTFKRKFR 85

Query: 91  LPVMVDVDAISAGFENGVLEITVPRSFRRSSVIHS---PDQLQLLARAA 135
           LP  +D+  ISAG+E+GVL + VP+      +I     P+ LQLLARAA
Sbjct: 86  LPESIDMIGISAGYEDGVLTVIVPKRIMTRRLIDPSDVPESLQLLARAA 134

[Close]

BLAST of Lsi02G006090 vs. ExPASy Swiss-Prot
Match: Q7EZ57 (18.8 kDa class V heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP18.8 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.2e-21
Identity = 52/94 (55.32%), Postives = 67/94 (71.28%), Query Frame = 0


Query: 31  NYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVTIPA------KSFS 90
           ++V W +T+ +HL+SA LPGVRKEEI+VEVED+ YL+IRTE  DG           +SF+
Sbjct: 55  SHVSWEETAAAHLYSASLPGVRKEEIRVEVEDAMYLVIRTELDDGGDGDGGGGGGRRSFA 114

Query: 91  RKFRLPVMVDVDAISAGFENGVLEITVPRSFRRS 119
           RKFRLP MVD D ISA + +GVL +TVPR   R+
Sbjct: 115 RKFRLPAMVDADGISAEYTHGVLRVTVPRLHTRA 148

[Close]

BLAST of Lsi02G006090 vs. ExPASy Swiss-Prot
Match: P27777 (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=HSP16.9A PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.2e-14
Identity = 40/92 (43.48%), Postives = 56/92 (60.87%), Query Frame = 0


Query: 33  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVTIPAKS 92
           + W +T +SH+F ADLPGV+KEE+KVEVE+   L+I          + +    V   +  
Sbjct: 45  IDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQ 104

Query: 93  FSRKFRLPVMVDVDAISAGFENGVLEITVPRS 115
           F R+FRLP    VD + AG ENGVL +TVP++
Sbjct: 105 FMRRFRLPENAKVDQVKAGLENGVLTVTVPKA 136

[Close]

BLAST of Lsi02G006090 vs. ExPASy Swiss-Prot
Match: Q943E6 (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=HSP16.9B PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.2e-14
Identity = 40/92 (43.48%), Postives = 56/92 (60.87%), Query Frame = 0


Query: 33  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVTIPAKS 92
           + W +T +SH+F ADLPGV+KEE+KVEVE+   L+I          + +    V   +  
Sbjct: 45  IDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQ 104

Query: 93  FSRKFRLPVMVDVDAISAGFENGVLEITVPRS 115
           F R+FRLP    VD + AG ENGVL +TVP++
Sbjct: 105 FMRRFRLPENAKVDQVKAGMENGVLTVTVPKA 136

[Close]

BLAST of Lsi02G006090 vs. ExPASy Swiss-Prot
Match: Q05832 (18.3 kDa class I heat shock protein OS=Oxybasis rubra OX=3560 GN=HSP18 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.6e-14
Identity = 41/92 (44.57%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 33  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVTIPAKS 92
           + W +T ++H+F ADLPGV+KEE+KVEVED   L I          + +    V   +  
Sbjct: 57  IDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLRISGQRAREKEEKNDTWHRVERSSGQ 116

Query: 93  FSRKFRLPVMVDVDAISAGFENGVLEITVPRS 115
           F RKFRLP    VD + AG ENGVL +TVP++
Sbjct: 117 FMRKFRLPENAKVDQVKAGMENGVLTVTVPKN 148

[Close]

BLAST of Lsi02G006090 vs. ExPASy TrEMBL
Match: H6TB34 (HSP15 OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 4.3e-63
Identity = 127/134 (94.78%), Postives = 129/134 (96.27%), Query Frame = 0


Query: 1   MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60
           MEISTSNPSSLH SFP RLLFPYFHYTIP NYVHWVQTSDSHLFSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSNPSSLHYSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPRSFRRSSV 120
           EDSRYLIIRTEAVDGVT+PAKSFSRKFRLPV+VDVDAISAGFENGVLEITVPRSFRRSSV
Sbjct: 61  EDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRSSV 120

Query: 121 IHSPDQLQLLARAA 135
           IHSPD  QLLARAA
Sbjct: 121 IHSPD--QLLARAA 132

[Close]

BLAST of Lsi02G006090 vs. ExPASy TrEMBL
Match: A0A6J1KG72 (15.4 kDa class V heat shock protein OS=Cucurbita maxima OX=3661 GN=LOC111495481 PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.7e-57
Identity = 117/137 (85.40%), Postives = 127/137 (92.70%), Query Frame = 0


Query: 1   MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60
           MEISTS+ +SLHNS P RLLFPY+HY +P+NYVHW QTS+SH+FSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSH-ASLHNSLPPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPRSFRRSSV 120
           EDSRYLIIRT+AVDGVT+PAKSFSRKFRLPV+VDVDAISAGFENGVLEITVPRSFR  SV
Sbjct: 61  EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRTRSV 120

Query: 121 IH---SPDQLQLLARAA 135
           IH   SPDQLQLLARAA
Sbjct: 121 IHQTDSPDQLQLLARAA 136

[Close]

BLAST of Lsi02G006090 vs. ExPASy TrEMBL
Match: A0A6J1F477 (15.4 kDa class V heat shock protein OS=Cucurbita moschata OX=3662 GN=LOC111440034 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 6.1e-57
Identity = 115/137 (83.94%), Postives = 125/137 (91.24%), Query Frame = 0


Query: 1   MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60
           MEISTS+P+SLHNS   RLLFPY+HY +P+NYVHW QTS+SH+FSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSHPASLHNSLSPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPRSFRRSSV 120
           EDSRYLIIRT+AVDGVT+PAKSFSRKFRLPV+VDVDAISAGFENGVLEITVPRS R  SV
Sbjct: 61  EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSLRTRSV 120

Query: 121 IH---SPDQLQLLARAA 135
           IH   S DQLQLLARAA
Sbjct: 121 IHQTDSSDQLQLLARAA 137

[Close]

BLAST of Lsi02G006090 vs. ExPASy TrEMBL
Match: A0A6J1CFU3 (15.4 kDa class V heat shock protein OS=Momordica charantia OX=3673 GN=LOC111010826 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 9.0e-53
Identity = 114/137 (83.21%), Postives = 120/137 (87.59%), Query Frame = 0


Query: 1   MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60
           MEI  SN  SL N FP  LL+PY+HY IP+NYVHWVQT DSH+FSADLPGVRKEEIKVEV
Sbjct: 26  MEI--SNRPSLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEV 85

Query: 61  EDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPRSFRRSSV 120
           EDSRYLIIRTEAVDGV   AKSFSRKFRLPV+VDVDAISAGFENGVLEITVPRSFRR+SV
Sbjct: 86  EDSRYLIIRTEAVDGVEELAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRASV 145

Query: 121 I---HSPDQLQLLARAA 135
           I    SPDQLQLLARAA
Sbjct: 146 ILPTDSPDQLQLLARAA 160

[Close]

BLAST of Lsi02G006090 vs. ExPASy TrEMBL
Match: A0A0A0LUT8 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G063560 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.2e-52
Identity = 113/135 (83.70%), Postives = 118/135 (87.41%), Query Frame = 0


Query: 1   MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60
           MEISTS P          LLFPY+HY+IP NYVHWVQTSDSHLFSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSTPHP--------LLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPR-SFRRSS 120
           EDSRYLIIRTEAV+GVT PAKSFSRKFRLPV+VDVD ISAGFENGVLEITVPR SFRR S
Sbjct: 61  EDSRYLIIRTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRS 120

Query: 121 VIHSPDQLQLLARAA 135
           V+HSPDQ QLLARAA
Sbjct: 121 VVHSPDQHQLLARAA 127

[Close]

BLAST of Lsi02G006090 vs. NCBI nr
Match: XP_038894889.1 (15.4 kDa class V heat shock protein [Benincasa hispida])

HSP 1 Score: 260.0 bits (663), Expect = 1.1e-65
Identity = 128/134 (95.52%), Postives = 131/134 (97.76%), Query Frame = 0


Query: 1   MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60
           MEISTSNPSSLHNSFP RLLFPYFHYTIP NYVHWVQTSDSHLFSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSNPSSLHNSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPRSFRRSSV 120
           EDSRYLIIRTEAVDGVT+PAKSFSRKFRLPV++DVD ISAGFENGVLEITVPRSFRRSSV
Sbjct: 61  EDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVLIDVDGISAGFENGVLEITVPRSFRRSSV 120

Query: 121 IHSPDQLQLLARAA 135
           IHSPDQLQLLARAA
Sbjct: 121 IHSPDQLQLLARAA 134

[Close]

BLAST of Lsi02G006090 vs. NCBI nr
Match: ADU55781.1 (HSP15 [Citrullus lanatus])

HSP 1 Score: 250.4 bits (638), Expect = 8.9e-63
Identity = 127/134 (94.78%), Postives = 129/134 (96.27%), Query Frame = 0


Query: 1   MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60
           MEISTSNPSSLH SFP RLLFPYFHYTIP NYVHWVQTSDSHLFSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSNPSSLHYSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPRSFRRSSV 120
           EDSRYLIIRTEAVDGVT+PAKSFSRKFRLPV+VDVDAISAGFENGVLEITVPRSFRRSSV
Sbjct: 61  EDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRSSV 120

Query: 121 IHSPDQLQLLARAA 135
           IHSPD  QLLARAA
Sbjct: 121 IHSPD--QLLARAA 132

[Close]

BLAST of Lsi02G006090 vs. NCBI nr
Match: XP_023001317.1 (15.4 kDa class V heat shock protein [Cucurbita maxima])

HSP 1 Score: 231.1 bits (588), Expect = 5.6e-57
Identity = 117/137 (85.40%), Postives = 127/137 (92.70%), Query Frame = 0


Query: 1   MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60
           MEISTS+ +SLHNS P RLLFPY+HY +P+NYVHW QTS+SH+FSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSH-ASLHNSLPPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPRSFRRSSV 120
           EDSRYLIIRT+AVDGVT+PAKSFSRKFRLPV+VDVDAISAGFENGVLEITVPRSFR  SV
Sbjct: 61  EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRTRSV 120

Query: 121 IH---SPDQLQLLARAA 135
           IH   SPDQLQLLARAA
Sbjct: 121 IHQTDSPDQLQLLARAA 136

[Close]

BLAST of Lsi02G006090 vs. NCBI nr
Match: XP_022933175.1 (15.4 kDa class V heat shock protein [Cucurbita moschata] >XP_023518998.1 15.4 kDa class V heat shock protein [Cucurbita pepo subsp. pepo] >KAG6584081.1 15.4 kDa class V heat shock protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019683.1 15.4 kDa class V heat shock protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 229.9 bits (585), Expect = 1.2e-56
Identity = 115/137 (83.94%), Postives = 125/137 (91.24%), Query Frame = 0


Query: 1   MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60
           MEISTS+P+SLHNS   RLLFPY+HY +P+NYVHW QTS+SH+FSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSHPASLHNSLSPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPRSFRRSSV 120
           EDSRYLIIRT+AVDGVT+PAKSFSRKFRLPV+VDVDAISAGFENGVLEITVPRS R  SV
Sbjct: 61  EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSLRTRSV 120

Query: 121 IH---SPDQLQLLARAA 135
           IH   S DQLQLLARAA
Sbjct: 121 IHQTDSSDQLQLLARAA 137

[Close]

BLAST of Lsi02G006090 vs. NCBI nr
Match: XP_022140087.1 (15.4 kDa class V heat shock protein [Momordica charantia])

HSP 1 Score: 216.1 bits (549), Expect = 1.9e-52
Identity = 114/137 (83.21%), Postives = 120/137 (87.59%), Query Frame = 0


Query: 1   MEISTSNPSSLHNSFPSRLLFPYFHYTIPRNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60
           MEI  SN  SL N FP  LL+PY+HY IP+NYVHWVQT DSH+FSADLPGVRKEEIKVEV
Sbjct: 26  MEI--SNRPSLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEV 85

Query: 61  EDSRYLIIRTEAVDGVTIPAKSFSRKFRLPVMVDVDAISAGFENGVLEITVPRSFRRSSV 120
           EDSRYLIIRTEAVDGV   AKSFSRKFRLPV+VDVDAISAGFENGVLEITVPRSFRR+SV
Sbjct: 86  EDSRYLIIRTEAVDGVEELAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRASV 145

Query: 121 I---HSPDQLQLLARAA 135
           I    SPDQLQLLARAA
Sbjct: 146 ILPTDSPDQLQLLARAA 160

[Close]

BLAST of Lsi02G006090 vs. TAIR 10
Match: AT4G21870.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 5.5e-26
Identity = 62/109 (56.88%), Postives = 76/109 (69.72%), Query Frame = 0


Query: 31  NYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEA--VDGVTIPAKSFSRKFR 90
           N+V W Q+ DSH FS DLPG+RKEEIKVE+EDS YLIIRTEA  +     P K+F RKFR
Sbjct: 26  NHVRWSQSPDSHTFSVDLPGLRKEEIKVEIEDSIYLIIRTEATPMSPPDQPLKTFKRKFR 85

Query: 91  LPVMVDVDAISAGFENGVLEITVPRSFRRSSVIHS---PDQLQLLARAA 135
           LP  +D+  ISAG+E+GVL + VP+      +I     P+ LQLLARAA
Sbjct: 86  LPESIDMIGISAGYEDGVLTVIVPKRIMTRRLIDPSDVPESLQLLARAA 134

[Close]

BLAST of Lsi02G006090 vs. TAIR 10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 79.0 bits (193), Expect = 3.3e-15
Identity = 40/91 (43.96%), Postives = 56/91 (61.54%), Query Frame = 0


Query: 33  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVTIPAKS 92
           V W +T+++H+F ADLPG++KEE+KVE+ED   L I          + +    V   +  
Sbjct: 48  VDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGG 107

Query: 93  FSRKFRLPVMVDVDAISAGFENGVLEITVPR 114
           FSRKFRLP  V +D + A  ENGVL +TVP+
Sbjct: 108 FSRKFRLPENVKMDQVKASMENGVLTVTVPK 138

[Close]

BLAST of Lsi02G006090 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 7.4e-15
Identity = 39/91 (42.86%), Postives = 56/91 (61.54%), Query Frame = 0


Query: 33  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVTIPAKS 92
           V W +T+++H+F ADLPG++KEE+KVE+ED   L I          + +    V   +  
Sbjct: 50  VDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQ 109

Query: 93  FSRKFRLPVMVDVDAISAGFENGVLEITVPR 114
           FSRKF+LP  V +D + A  ENGVL +TVP+
Sbjct: 110 FSRKFKLPENVKMDQVKASMENGVLTVTVPK 140

[Close]

BLAST of Lsi02G006090 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-14
Identity = 42/103 (40.78%), Postives = 58/103 (56.31%), Query Frame = 0


Query: 33  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVD----------GVTIPAKS 92
           V W +T ++H+F ADLPG+RKEE+KVEVED   L I  E  +           V   +  
Sbjct: 52  VDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGK 111

Query: 93  FSRKFRLPVMVDVDAISAGFENGVLEITVPRSFRRSSVIHSPD 126
           F+R+FRLP    ++ I A  ENGVL +TVP+   +   + S D
Sbjct: 112 FTRRFRLPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSID 154

[Close]

BLAST of Lsi02G006090 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 75.9 bits (185), Expect = 2.8e-14
Identity = 38/101 (37.62%), Postives = 60/101 (59.41%), Query Frame = 0


Query: 33  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVTIPAKS 92
           V W +T ++H+F ADLPG++KEE+KVE+E+   L I          + +    V   +  
Sbjct: 48  VDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQ 107

Query: 93  FSRKFRLPVMVDVDAISAGFENGVLEITVPRSFRRSSVIHS 124
           F+R+FRLP  V +D + A  ENGVL +TVP++  + + + S
Sbjct: 108 FTRRFRLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKS 148

The following BLAST results are available for this feature:

BLAST of Lsi02G006090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49710	7.7e-25	56.88	15.4 kDa class V heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP15.4 P...	[more]
Q7EZ57	5.2e-21	55.32	18.8 kDa class V heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
P27777	1.2e-14	43.48	16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q943E6	1.2e-14	43.48	16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q05832	1.6e-14	44.57	18.3 kDa class I heat shock protein OS=Oxybasis rubra OX=3560 GN=HSP18 PE=2 SV=1	[more]

BLAST of Lsi02G006090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
H6TB34	4.3e-63	94.78	HSP15 OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A6J1KG72	2.7e-57	85.40	15.4 kDa class V heat shock protein OS=Cucurbita maxima OX=3661 GN=LOC111495481 ...	[more]
A0A6J1F477	6.1e-57	83.94	15.4 kDa class V heat shock protein OS=Cucurbita moschata OX=3662 GN=LOC11144003...	[more]
A0A6J1CFU3	9.0e-53	83.21	15.4 kDa class V heat shock protein OS=Momordica charantia OX=3673 GN=LOC1110108...	[more]
A0A0A0LUT8	1.2e-52	83.70	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G063560 PE=3 S...	[more]

BLAST of Lsi02G006090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894889.1	1.1e-65	95.52	15.4 kDa class V heat shock protein [Benincasa hispida]	[more]
ADU55781.1	8.9e-63	94.78	HSP15 [Citrullus lanatus]	[more]
XP_023001317.1	5.6e-57	85.40	15.4 kDa class V heat shock protein [Cucurbita maxima]	[more]
XP_022933175.1	1.2e-56	83.94	15.4 kDa class V heat shock protein [Cucurbita moschata] >XP_023518998.1 15.4 kD...	[more]
XP_022140087.1	1.9e-52	83.21	15.4 kDa class V heat shock protein [Momordica charantia]	[more]

BLAST of Lsi02G006090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21870.1	5.5e-26	56.88	HSP20-like chaperones superfamily protein	[more]
AT1G59860.1	3.3e-15	43.96	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	7.4e-15	42.86	HSP20-like chaperones superfamily protein	[more]
AT1G53540.1	1.3e-14	40.78	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	2.8e-14	37.62	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 35..115 e-value: 2.4E-15 score: 56.5
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 24..130 score: 19.769976
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 17..127 e-value: 1.4E-22 score: 81.7
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 15..114
None	No IPR available	PANTHER	PTHR11527:SF97	15.4 KDA CLASS V HEAT SHOCK PROTEIN	coord: 1..127
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G006090.1	Lsi02G006090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding