Lsi02G006030 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G006030
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein of unknown function, DUF584
Location	chr02: 5353034 .. 5353627 (-)
RNA-Seq Expression	Lsi02G006030
Synteny	Lsi02G006030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAAGGACGAAAGTTGGGAATTAACAGGAACGAGCGGTTCCTTGGGAGCTATAGCAATGGACACGCTCAAGGCTCCTATAATGGAGATGACTCATCGGAGCTCCGTGAAGAAGATGTATGGTCAATAATTGACAACAAAAACTCGGCCGACGGAGAAGATGAAAATTACGGGAACATTACAGTCAGAACTCGCCGGAGATCGACGCCGCGAGATGAACGAAACGTCGGTGGAGTGTCAATTGATTTTCAAGATTCTGGAAGGACGGCAACGGCAGTGGCAACATCGCAGAGGAATAATCCACGTGGACGCCACGTGTCGGCATCGGCTCCGATGAACGTGCCGGATTGGAGCAAGATTCTAAGGGCGGAATCAGTGGAATCGCTGCCGGAGATCGACGACGGAGGGTATTACAACAACGATGAGGCGGAGATGGTACCGCCGCATGAGTATTTAGCAAGGGAATACGCGAGGAGCCGGAACGCAGCGGCGGCGACGTCGGTTTTCGAGGGCGTCGGCCGGACTCTAAAAGGGCGAGATATGAGGAGGGTTCGTGACGCGGTTTGGAGTCAGACCGGGTTCGATGGTTAA

mRNA sequence

ATGGCGAAAGGACGAAAGTTGGGAATTAACAGGAACGAGCGGTTCCTTGGGAGCTATAGCAATGGACACGCTCAAGGCTCCTATAATGGAGATGACTCATCGGAGCTCCGTGAAGAAGATGTATGGTCAATAATTGACAACAAAAACTCGGCCGACGGAGAAGATGAAAATTACGGGAACATTACAGTCAGAACTCGCCGGAGATCGACGCCGCGAGATGAACGAAACGTCGGTGGAGTGTCAATTGATTTTCAAGATTCTGGAAGGACGGCAACGGCAGTGGCAACATCGCAGAGGAATAATCCACGTGGACGCCACGTGTCGGCATCGGCTCCGATGAACGTGCCGGATTGGAGCAAGATTCTAAGGGCGGAATCAGTGGAATCGCTGCCGGAGATCGACGACGGAGGGTATTACAACAACGATGAGGCGGAGATGGTACCGCCGCATGAGTATTTAGCAAGGGAATACGCGAGGAGCCGGAACGCAGCGGCGGCGACGTCGGTTTTCGAGGGCGTCGGCCGGACTCTAAAAGGGCGAGATATGAGGAGGGTTCGTGACGCGGTTTGGAGTCAGACCGGGTTCGATGGTTAA

Coding sequence (CDS)

ATGGCGAAAGGACGAAAGTTGGGAATTAACAGGAACGAGCGGTTCCTTGGGAGCTATAGCAATGGACACGCTCAAGGCTCCTATAATGGAGATGACTCATCGGAGCTCCGTGAAGAAGATGTATGGTCAATAATTGACAACAAAAACTCGGCCGACGGAGAAGATGAAAATTACGGGAACATTACAGTCAGAACTCGCCGGAGATCGACGCCGCGAGATGAACGAAACGTCGGTGGAGTGTCAATTGATTTTCAAGATTCTGGAAGGACGGCAACGGCAGTGGCAACATCGCAGAGGAATAATCCACGTGGACGCCACGTGTCGGCATCGGCTCCGATGAACGTGCCGGATTGGAGCAAGATTCTAAGGGCGGAATCAGTGGAATCGCTGCCGGAGATCGACGACGGAGGGTATTACAACAACGATGAGGCGGAGATGGTACCGCCGCATGAGTATTTAGCAAGGGAATACGCGAGGAGCCGGAACGCAGCGGCGGCGACGTCGGTTTTCGAGGGCGTCGGCCGGACTCTAAAAGGGCGAGATATGAGGAGGGTTCGTGACGCGGTTTGGAGTCAGACCGGGTTCGATGGTTAA

Protein sequence

MAKGRKLGINRNERFLGSYSNGHAQGSYNGDDSSELREEDVWSIIDNKNSADGEDENYGNITVRTRRRSTPRDERNVGGVSIDFQDSGRTATAVATSQRNNPRGRHVSASAPMNVPDWSKILRAESVESLPEIDDGGYYNNDEAEMVPPHEYLAREYARSRNAAAATSVFEGVGRTLKGRDMRRVRDAVWSQTGFDG

Homology

[Close]

BLAST of Lsi02G006030 vs. ExPASy TrEMBL
Match: A0A5A7UP29 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005790 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.4e-94
Identity = 183/198 (92.42%), Postives = 189/198 (95.45%), Query Frame = 0


Query: 1   MAKGRKLGINRNERFLGSYS-NGHAQGSYNGDDSSELREEDVWSIIDNKNSADGEDENYG 60
           MAKGRKLGINRNERFLGSYS NGHAQGSYNGDDSSELREEDVWSIIDN+NSADGEDENYG
Sbjct: 1   MAKGRKLGINRNERFLGSYSNNGHAQGSYNGDDSSELREEDVWSIIDNRNSADGEDENYG 60

Query: 61  NITVRTRRRSTPRDERNVGGVSIDFQDSGRTATAVATSQRNNPRGRHVSASAPMNVPDWS 120
           NITVRTRRRSTPRDER++GGVSI FQDSG + TAVATSQ NNPRGRHVSASAP+NVPDWS
Sbjct: 61  NITVRTRRRSTPRDERHLGGVSIAFQDSG-SRTAVATSQGNNPRGRHVSASAPVNVPDWS 120

Query: 121 KILRAESVESLPEIDDGGYYNNDEAEMVPPHEYLAREYARSRNAAAATSVFEGVGRTLKG 180
           KIL AESVESL E+DDGGYYNNDE EMVPPHEYLAREYARSRN AAATSVFEGVGRTLKG
Sbjct: 121 KILWAESVESLREMDDGGYYNNDETEMVPPHEYLAREYARSRNTAAATSVFEGVGRTLKG 180

Query: 181 RDMRRVRDAVWSQTGFDG 198
           RDMRRVRDAVWSQTGFDG
Sbjct: 181 RDMRRVRDAVWSQTGFDG 197

[Close]

BLAST of Lsi02G006030 vs. ExPASy TrEMBL
Match: A0A1S3B268 (uncharacterized protein LOC103485322 OS=Cucumis melo OX=3656 GN=LOC103485322 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.4e-94
Identity = 183/198 (92.42%), Postives = 189/198 (95.45%), Query Frame = 0


Query: 1   MAKGRKLGINRNERFLGSYS-NGHAQGSYNGDDSSELREEDVWSIIDNKNSADGEDENYG 60
           MAKGRKLGINRNERFLGSYS NGHAQGSYNGDDSSELREEDVWSIIDN+NSADGEDENYG
Sbjct: 1   MAKGRKLGINRNERFLGSYSNNGHAQGSYNGDDSSELREEDVWSIIDNRNSADGEDENYG 60

Query: 61  NITVRTRRRSTPRDERNVGGVSIDFQDSGRTATAVATSQRNNPRGRHVSASAPMNVPDWS 120
           NITVRTRRRSTPRDER++GGVSI FQDSG + TAVATSQ NNPRGRHVSASAP+NVPDWS
Sbjct: 61  NITVRTRRRSTPRDERHLGGVSIAFQDSG-SRTAVATSQGNNPRGRHVSASAPVNVPDWS 120

Query: 121 KILRAESVESLPEIDDGGYYNNDEAEMVPPHEYLAREYARSRNAAAATSVFEGVGRTLKG 180
           KIL AESVESL E+DDGGYYNNDE EMVPPHEYLAREYARSRN AAATSVFEGVGRTLKG
Sbjct: 121 KILWAESVESLREMDDGGYYNNDETEMVPPHEYLAREYARSRNTAAATSVFEGVGRTLKG 180

Query: 181 RDMRRVRDAVWSQTGFDG 198
           RDMRRVRDAVWSQTGFDG
Sbjct: 181 RDMRRVRDAVWSQTGFDG 197

[Close]

BLAST of Lsi02G006030 vs. ExPASy TrEMBL
Match: A0A0A0LU86 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063480 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 2.9e-92
Identity = 180/197 (91.37%), Postives = 184/197 (93.40%), Query Frame = 0


Query: 1   MAKGRKLGINRNERFLGSYSNGHAQGSYNGDDSSELREEDVWSIIDNKNSADGEDENYGN 60
           MAKGRKLGINRNERFLGSYSNGHAQ SYNGDDSSELREEDVWSIIDNKNSAD EDENYGN
Sbjct: 1   MAKGRKLGINRNERFLGSYSNGHAQASYNGDDSSELREEDVWSIIDNKNSADAEDENYGN 60

Query: 61  ITVRTRRRSTPRDERNVGGVSIDFQDSGRTATAVATSQRNNPRGRHVSASAPMNVPDWSK 120
           IT+RTRRRSTPRDERNVGGVSI FQDSG + TA ATSQ NNPRGRHVSASAP+NVPDWSK
Sbjct: 61  ITLRTRRRSTPRDERNVGGVSIAFQDSG-SRTAAATSQGNNPRGRHVSASAPVNVPDWSK 120

Query: 121 ILRAESVESLPEIDDGGYYNNDEAEMVPPHEYLAREYARSRNAAAATSVFEGVGRTLKGR 180
           IL AES  SL E+DDGGYYNNDE EMVPPHEYLAREYARSRN AAATSVFEGVGRTLKGR
Sbjct: 121 ILWAES--SLREMDDGGYYNNDETEMVPPHEYLAREYARSRNTAAATSVFEGVGRTLKGR 180

Query: 181 DMRRVRDAVWSQTGFDG 198
           DMRRVRDAVWSQTGFDG
Sbjct: 181 DMRRVRDAVWSQTGFDG 194

[Close]

BLAST of Lsi02G006030 vs. ExPASy TrEMBL
Match: A0A6J1GR42 (uncharacterized protein LOC111456739 OS=Cucurbita moschata OX=3662 GN=LOC111456739 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 4.1e-78
Identity = 156/197 (79.19%), Postives = 168/197 (85.28%), Query Frame = 0


Query: 1   MAKGRKLGINRNERFLGSYSNGHAQGSYNGDDSSELREEDVWSIIDNKNSADGEDENYGN 60
           MAKGRKLGINRNERFLGSY NG+ QGS  GD+SSE REEDVW++IDN NS +GEDE   +
Sbjct: 1   MAKGRKLGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDE---S 60

Query: 61  ITVRTRRRSTPRDERNVGGVSIDFQDSGRTATAVATSQRNNPRGRHVSASAPMNVPDWSK 120
           +TVR RRRSTP DE+NVGGVSI FQDS RTA           RGRH++ASAPMNVPDWSK
Sbjct: 61  MTVRNRRRSTPLDEQNVGGVSIAFQDSNRTA-----------RGRHLAASAPMNVPDWSK 120

Query: 121 ILRAESVESLPEIDDGGYYNNDEAEMVPPHEYLAREYARSRNAAAATSVFEGVGRTLKGR 180
           ILRAESVESLPE+D GGYYNNDE +MVPPHEYLAREYARSRN AAATSV EGVGRTLKGR
Sbjct: 121 ILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGR 180

Query: 181 DMRRVRDAVWSQTGFDG 198
           DMRRVRDAVWSQTGFDG
Sbjct: 181 DMRRVRDAVWSQTGFDG 183

[Close]

BLAST of Lsi02G006030 vs. ExPASy TrEMBL
Match: A0A6J1K0K9 (uncharacterized protein LOC111490009 OS=Cucurbita maxima OX=3661 GN=LOC111490009 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.2e-77
Identity = 156/197 (79.19%), Postives = 167/197 (84.77%), Query Frame = 0


Query: 1   MAKGRKLGINRNERFLGSYSNGHAQGSYNGDDSSELREEDVWSIIDNKNSADGEDENYGN 60
           MAKGRKLGINR+ERFLGSY NG+ QGS  GD+SSE REEDVW++IDN NS +GEDE   +
Sbjct: 1   MAKGRKLGINRSERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDE---S 60

Query: 61  ITVRTRRRSTPRDERNVGGVSIDFQDSGRTATAVATSQRNNPRGRHVSASAPMNVPDWSK 120
           +TVR RRRSTP DE NVGGVSI FQDS RTA           RGRH++ASAPMNVPDWSK
Sbjct: 61  MTVRNRRRSTPLDEPNVGGVSIAFQDSNRTA-----------RGRHIAASAPMNVPDWSK 120

Query: 121 ILRAESVESLPEIDDGGYYNNDEAEMVPPHEYLAREYARSRNAAAATSVFEGVGRTLKGR 180
           ILRAESVESLPE D GGYYNNDEA+MVPPHEYLAREYARSRN AAATSV EGVGRTLKGR
Sbjct: 121 ILRAESVESLPETDGGGYYNNDEADMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGR 180

Query: 181 DMRRVRDAVWSQTGFDG 198
           DMRRVRDAVWSQTGFDG
Sbjct: 181 DMRRVRDAVWSQTGFDG 183

[Close]

BLAST of Lsi02G006030 vs. NCBI nr
Match: XP_038894790.1 (uncharacterized protein LOC120083209 [Benincasa hispida])

HSP 1 Score: 368.6 bits (945), Expect = 3.3e-98
Identity = 183/197 (92.89%), Postives = 190/197 (96.45%), Query Frame = 0


Query: 1   MAKGRKLGINRNERFLGSYSNGHAQGSYNGDDSSELREEDVWSIIDNKNSADGEDENYGN 60
           MAKGRKLGINRNERFLGSYSNG+AQGSYNGDDSSELREEDVWSIIDNKNSADGEDENYGN
Sbjct: 1   MAKGRKLGINRNERFLGSYSNGYAQGSYNGDDSSELREEDVWSIIDNKNSADGEDENYGN 60

Query: 61  ITVRTRRRSTPRDERNVGGVSIDFQDSGRTATAVATSQRNNPRGRHVSASAPMNVPDWSK 120
           +TVRTRRRSTPRDER VGGVSI F+DSGRT  AV  +QRNNPRGRHVSASAP+NVPDWSK
Sbjct: 61  VTVRTRRRSTPRDERKVGGVSIAFEDSGRTVAAVTAAQRNNPRGRHVSASAPVNVPDWSK 120

Query: 121 ILRAESVESLPEIDDGGYYNNDEAEMVPPHEYLAREYARSRNAAAATSVFEGVGRTLKGR 180
           ILRAE VESLPE+DDGGYYNNDEAEMVPPHEYLAREYARSRNAAAATSVFEGVGRTLKGR
Sbjct: 121 ILRAEPVESLPEMDDGGYYNNDEAEMVPPHEYLAREYARSRNAAAATSVFEGVGRTLKGR 180

Query: 181 DMRRVRDAVWSQTGFDG 198
           DMRRVRDAVW+QTGFDG
Sbjct: 181 DMRRVRDAVWNQTGFDG 197

[Close]

BLAST of Lsi02G006030 vs. NCBI nr
Match: XP_008441099.1 (PREDICTED: uncharacterized protein LOC103485322 [Cucumis melo] >KAA0056858.1 uncharacterized protein E6C27_scaffold96G00270 [Cucumis melo var. makuwa] >TYJ99361.1 uncharacterized protein E5676_scaffold248G005790 [Cucumis melo var. makuwa])

HSP 1 Score: 354.8 bits (909), Expect = 4.9e-94
Identity = 183/198 (92.42%), Postives = 189/198 (95.45%), Query Frame = 0


Query: 1   MAKGRKLGINRNERFLGSYS-NGHAQGSYNGDDSSELREEDVWSIIDNKNSADGEDENYG 60
           MAKGRKLGINRNERFLGSYS NGHAQGSYNGDDSSELREEDVWSIIDN+NSADGEDENYG
Sbjct: 1   MAKGRKLGINRNERFLGSYSNNGHAQGSYNGDDSSELREEDVWSIIDNRNSADGEDENYG 60

Query: 61  NITVRTRRRSTPRDERNVGGVSIDFQDSGRTATAVATSQRNNPRGRHVSASAPMNVPDWS 120
           NITVRTRRRSTPRDER++GGVSI FQDSG + TAVATSQ NNPRGRHVSASAP+NVPDWS
Sbjct: 61  NITVRTRRRSTPRDERHLGGVSIAFQDSG-SRTAVATSQGNNPRGRHVSASAPVNVPDWS 120

Query: 121 KILRAESVESLPEIDDGGYYNNDEAEMVPPHEYLAREYARSRNAAAATSVFEGVGRTLKG 180
           KIL AESVESL E+DDGGYYNNDE EMVPPHEYLAREYARSRN AAATSVFEGVGRTLKG
Sbjct: 121 KILWAESVESLREMDDGGYYNNDETEMVPPHEYLAREYARSRNTAAATSVFEGVGRTLKG 180

Query: 181 RDMRRVRDAVWSQTGFDG 198
           RDMRRVRDAVWSQTGFDG
Sbjct: 181 RDMRRVRDAVWSQTGFDG 197

[Close]

BLAST of Lsi02G006030 vs. NCBI nr
Match: XP_004145178.1 (uncharacterized protein LOC101209631 [Cucumis sativus])

HSP 1 Score: 347.8 bits (891), Expect = 6.0e-92
Identity = 180/197 (91.37%), Postives = 184/197 (93.40%), Query Frame = 0


Query: 1   MAKGRKLGINRNERFLGSYSNGHAQGSYNGDDSSELREEDVWSIIDNKNSADGEDENYGN 60
           MAKGRKLGINRNERFLGSYSNGHAQ SYNGDDSSELREEDVWSIIDNKNSAD EDENYGN
Sbjct: 1   MAKGRKLGINRNERFLGSYSNGHAQASYNGDDSSELREEDVWSIIDNKNSADAEDENYGN 60

Query: 61  ITVRTRRRSTPRDERNVGGVSIDFQDSGRTATAVATSQRNNPRGRHVSASAPMNVPDWSK 120
           IT+RTRRRSTPRDERNVGGVSI FQDSG + TA ATSQ NNPRGRHVSASAP+NVPDWSK
Sbjct: 61  ITLRTRRRSTPRDERNVGGVSIAFQDSG-SRTAAATSQGNNPRGRHVSASAPVNVPDWSK 120

Query: 121 ILRAESVESLPEIDDGGYYNNDEAEMVPPHEYLAREYARSRNAAAATSVFEGVGRTLKGR 180
           IL AES  SL E+DDGGYYNNDE EMVPPHEYLAREYARSRN AAATSVFEGVGRTLKGR
Sbjct: 121 ILWAES--SLREMDDGGYYNNDETEMVPPHEYLAREYARSRNTAAATSVFEGVGRTLKGR 180

Query: 181 DMRRVRDAVWSQTGFDG 198
           DMRRVRDAVWSQTGFDG
Sbjct: 181 DMRRVRDAVWSQTGFDG 194

[Close]

BLAST of Lsi02G006030 vs. NCBI nr
Match: KGN64530.2 (hypothetical protein Csa_013580 [Cucumis sativus])

HSP 1 Score: 340.9 bits (873), Expect = 7.4e-90
Identity = 177/194 (91.24%), Postives = 181/194 (93.30%), Query Frame = 0


Query: 1   MAKGRKLGINRNERFLGSYSNGHAQGSYNGDDSSELREEDVWSIIDNKNSADGEDENYGN 60
           MAKGRKLGINRNERFLGSYSNGHAQ SYNGDDSSELREEDVWSIIDNKNSAD EDENYGN
Sbjct: 1   MAKGRKLGINRNERFLGSYSNGHAQASYNGDDSSELREEDVWSIIDNKNSADAEDENYGN 60

Query: 61  ITVRTRRRSTPRDERNVGGVSIDFQDSGRTATAVATSQRNNPRGRHVSASAPMNVPDWSK 120
           IT+RTRRRSTPRDERNVGGVSI FQDSG + TA ATSQ NNPRGRHVSASAP+NVPDWSK
Sbjct: 61  ITLRTRRRSTPRDERNVGGVSIAFQDSG-SRTAAATSQGNNPRGRHVSASAPVNVPDWSK 120

Query: 121 ILRAESVESLPEIDDGGYYNNDEAEMVPPHEYLAREYARSRNAAAATSVFEGVGRTLKGR 180
           IL AES  SL E+DDGGYYNNDE EMVPPHEYLAREYARSRN AAATSVFEGVGRTLKGR
Sbjct: 121 ILWAES--SLREMDDGGYYNNDETEMVPPHEYLAREYARSRNTAAATSVFEGVGRTLKGR 180

Query: 181 DMRRVRDAVWSQTG 195
           DMRRVRDAVWSQTG
Sbjct: 181 DMRRVRDAVWSQTG 191

[Close]

BLAST of Lsi02G006030 vs. NCBI nr
Match: XP_023542780.1 (uncharacterized protein LOC111802588 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 301.2 bits (770), Expect = 6.5e-78
Identity = 157/197 (79.70%), Postives = 168/197 (85.28%), Query Frame = 0


Query: 1   MAKGRKLGINRNERFLGSYSNGHAQGSYNGDDSSELREEDVWSIIDNKNSADGEDENYGN 60
           MAKGRKLGINRNERFLGSY NG+ QGS  GD+SSE REEDVW++IDN NS +GEDE   +
Sbjct: 1   MAKGRKLGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDE---S 60

Query: 61  ITVRTRRRSTPRDERNVGGVSIDFQDSGRTATAVATSQRNNPRGRHVSASAPMNVPDWSK 120
           +TVR RRRSTP DE NVGGVSI FQDS RTA           RGRH++ASAPMNVPDWSK
Sbjct: 61  MTVRNRRRSTPLDEPNVGGVSIAFQDSNRTA-----------RGRHLAASAPMNVPDWSK 120

Query: 121 ILRAESVESLPEIDDGGYYNNDEAEMVPPHEYLAREYARSRNAAAATSVFEGVGRTLKGR 180
           ILRAESVESLPE+D GGYYNNDEA+MVPPHEYLAREYARSRN AAATSV EGVGRTLKGR
Sbjct: 121 ILRAESVESLPEMDGGGYYNNDEADMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGR 180

Query: 181 DMRRVRDAVWSQTGFDG 198
           DMRRVRDAVWSQTGFDG
Sbjct: 181 DMRRVRDAVWSQTGFDG 183

[Close]

BLAST of Lsi02G006030 vs. TAIR 10
Match: AT1G11700.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 143.7 bits (361), Expect = 1.6e-34
Identity = 93/209 (44.50%), Postives = 127/209 (60.77%), Query Frame = 0


Query: 1   MAKGRKLGINRNERFLG-SYSNGHAQGSYNGDDSSELREEDVWSIIDNKNSADGEDENYG 60
           MA+GRKL ++++ER+LG SYS G + G+ +  D SEL EED+WS     ++ D   E   
Sbjct: 1   MARGRKLTMSQSERYLGSSYSYGDSNGN-SATDESELTEEDIWS-----HAVDHSPEMLE 60

Query: 61  NITVRTRRRSTPRDERNVGGVSIDFQDSGRTATAVATSQRNNPRG----------RHVSA 120
           +      R +  R+ R  GG+S+ F+D+  +   V   +     G          R +++
Sbjct: 61  SHGAWNTRDAVVRNGRVGGGLSLAFEDASSSPRIVHQIRGGGEGGGGGGGGGRVERQLAS 120

Query: 121 SAPMNVPDWSKILRAESVESLPEIDDGGYYNNDEAEMVPPHEYLAR-EYARSRNAAAATS 180
           SAP+NVPDWSKI R  SVES+ E D+      D   M+PPHEYLA+ +  RSR +    S
Sbjct: 121 SAPVNVPDWSKIYRVNSVESIHESDE--EEEEDSGMMMPPHEYLAKSQQRRSRKSGGGGS 180

Query: 181 VFEGVGRTLKGRDMRRVRDAVWSQTGFDG 198
           VFEGVGRTLKGR++RRVRDA+WSQTGF G
Sbjct: 181 VFEGVGRTLKGRELRRVRDAIWSQTGFYG 201

[Close]

BLAST of Lsi02G006030 vs. TAIR 10
Match: AT1G61930.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 141.0 bits (354), Expect = 1.0e-33
Identity = 92/209 (44.02%), Postives = 131/209 (62.68%), Query Frame = 0


Query: 1   MAKGRK-LGINRNERFLGSYSNGHAQGSYNGDDSSELREEDVWSIIDNKNSADGEDENYG 60
           MAKGRK   +NR++R+LGSY+ G + G+ +  D  EL EED+WS     +     +E+YG
Sbjct: 1   MAKGRKPTTMNRSDRYLGSYTYGDSHGN-SVTDELELGEEDIWSPAVIHDDTTENEESYG 60

Query: 61  NITVRTRRRSTPRDERNVGGVSIDFQDS--GRTATAVATSQRNNPRG-------RHVSAS 120
              +    R+T      VGG+S+ F+ S     +++    Q+ +  G       R +++S
Sbjct: 61  TWNL----RATLGKNGRVGGLSLAFEGSLVAPPSSSPMIVQKIHGGGGEGEEDRRKLASS 120

Query: 121 APMNVPDWSKILRAESVESLPEIDDGGYYNNDEAEMVPPHEYLAREYAR--SRNAAAATS 180
           AP+NVPDWSKI R +SVES+ E+DD     ++E+ M+PPHEYLA+  AR   +      S
Sbjct: 121 APVNVPDWSKIYRVDSVESIHELDDED-DEDEESGMMPPHEYLAKSQARRSRKIGGGGAS 180

Query: 181 VFEGVGRTLKGRDMRRVRDAVWSQTGFDG 198
           VF+GVGRTLKGR++RRVRDA+WSQTGF G
Sbjct: 181 VFDGVGRTLKGRELRRVRDAIWSQTGFYG 203

[Close]

BLAST of Lsi02G006030 vs. TAIR 10
Match: AT4G21930.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 134.4 bits (337), Expect = 9.8e-32
Identity = 95/205 (46.34%), Postives = 116/205 (56.59%), Query Frame = 0


Query: 1   MAKGRKLGINRNERFLGSYSNG---HAQGSYNGDDSSELREEDVWSIIDNKNSADGEDEN 60
           M KGR L I+R+ERFLGS+      H  G    +   EL EEDVWS+++       E + 
Sbjct: 1   MGKGRSLPISRSERFLGSHQQSDDHHVDGETTFE--LELMEEDVWSVVE-----PDEPKE 60

Query: 61  YGNITVRTRRRSTPRDERNVGGVSIDFQDSGRTATAVATSQRNNPRGRHVSASAPMNVPD 120
            G    R+   S     R  G VS              T   +  R RHV+ SAP+ VPD
Sbjct: 61  LGAWNARSLEASGSEWRRKGGRVS------------DLTVPSDGQRKRHVATSAPVKVPD 120

Query: 121 WSKILRAESVESL----PEIDDGGYYNND-EAEMVPPHEYLAREYARSRNAAAATSVFEG 180
           WSKIL+ ESV+S+     + D+    + D E+ MVPPHEY+A   ARSRN    +SVF G
Sbjct: 121 WSKILKVESVKSMHNNNNDNDNADVADCDWESAMVPPHEYVA---ARSRNGDGGSSVFLG 180

Query: 181 VGRTLKGRDMRRVRDAVWSQTGFDG 198
           VGRTLKGRDMRRVRDAVWSQTGF G
Sbjct: 181 VGRTLKGRDMRRVRDAVWSQTGFYG 183

[Close]

BLAST of Lsi02G006030 vs. TAIR 10
Match: AT4G21970.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 82.4 bits (202), Expect = 4.4e-16
Identity = 44/106 (41.51%), Postives = 67/106 (63.21%), Query Frame = 0


Query: 95  ATSQRNNPRGRHVS-----ASAPMNVPDWSKILRAESVESLPEIDDGGYYNNDEAEMVPP 154
           ++S R  P+G  VS     +SAPMN+PDWSK+       +   +      ++DE  MVPP
Sbjct: 40  SSSARYIPKGNEVSGGAKQSSAPMNIPDWSKVYGYSKKNTSSHLHSWAIDDDDEGSMVPP 99

Query: 155 HEYLAREYARSRNAAAATSVFEGVGRTLKGRDMRRVRDAVWSQTGF 196
           HE +A+  AR++   ++ S+ EG+GRTLKGRD+ + R+AV ++TGF
Sbjct: 100 HELVAKRLARTQ--ISSFSMCEGIGRTLKGRDLSKTRNAVLTRTGF 143

[Close]

BLAST of Lsi02G006030 vs. TAIR 10
Match: AT3G45210.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-15
Identity = 45/89 (50.56%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 107 VSASAPMNVPDWSKILRAESVESLPEIDDGGYYNNDEAEMVPPHEYLAREYARSRNAAAA 166
           V++S PMNV +WSKIL  E+ +S+   DDGG         +PPHEYLA      +   A+
Sbjct: 70  VASSLPMNVQNWSKILGKENRKSIENDDDGG------EGKLPPHEYLA------KTRMAS 129

Query: 167 TSVFEGVGRTLKGRDMRRVRDAVWSQTGF 196
            SV EG+GRTLKGRDM RVR+A+  +TGF
Sbjct: 130 FSVHEGIGRTLKGRDMSRVRNAILEKTGF 146

The following BLAST results are available for this feature:

BLAST of Lsi02G006030 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi02G006030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UP29	2.4e-94	92.42	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B268	2.4e-94	92.42	uncharacterized protein LOC103485322 OS=Cucumis melo OX=3656 GN=LOC103485322 PE=...	[more]
A0A0A0LU86	2.9e-92	91.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063480 PE=4 SV=1	[more]
A0A6J1GR42	4.1e-78	79.19	uncharacterized protein LOC111456739 OS=Cucurbita moschata OX=3662 GN=LOC1114567...	[more]
A0A6J1K0K9	1.2e-77	79.19	uncharacterized protein LOC111490009 OS=Cucurbita maxima OX=3661 GN=LOC111490009...	[more]

BLAST of Lsi02G006030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894790.1	3.3e-98	92.89	uncharacterized protein LOC120083209 [Benincasa hispida]	[more]
XP_008441099.1	4.9e-94	92.42	PREDICTED: uncharacterized protein LOC103485322 [Cucumis melo] >KAA0056858.1 unc...	[more]
XP_004145178.1	6.0e-92	91.37	uncharacterized protein LOC101209631 [Cucumis sativus]	[more]
KGN64530.2	7.4e-90	91.24	hypothetical protein Csa_013580 [Cucumis sativus]	[more]
XP_023542780.1	6.5e-78	79.70	uncharacterized protein LOC111802588 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi02G006030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11700.1	1.6e-34	44.50	Protein of unknown function, DUF584	[more]
AT1G61930.1	1.0e-33	44.02	Protein of unknown function, DUF584	[more]
AT4G21930.1	9.8e-32	46.34	Protein of unknown function, DUF584	[more]
AT4G21970.1	4.4e-16	41.51	Protein of unknown function, DUF584	[more]
AT3G45210.1	1.3e-15	50.56	Protein of unknown function, DUF584	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 34..196 e-value: 1.1E-41 score: 143.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..31
None	No IPR available	PANTHER	PTHR33083:SF51	SUBFAMILY NOT NAMED	coord: 1..197
None	No IPR available	PANTHER	PTHR33083	EXPRESSED PROTEIN	coord: 1..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G006030.1	Lsi02G006030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005829	cytosol
molecular_function	GO:0003729	mRNA binding