Lsi02G005790 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi02G005790
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr02: 5178374 .. 5178583 (+)
RNA-Seq ExpressionLsi02G005790
SyntenyLsi02G005790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGCAGTTGACTCGCAAGCCAACCCCTCAAGACGCCAAGGTTGTTCGGTGGTCGGACCCGGTCACAGGCAGAGTTATTGACGATGGCAATGTCGATACTTCTGCCGGAGAGGACCACCGTGGCATCAACAACGACTTGGAGGCAGAGGCGAGTCCCAAGGGGAAGGGGATGAGGAAAATCAGCAGCAGCTTGGCGTTGGAACTCTAG

mRNA sequence

ATGATGCAGTTGACTCGCAAGCCAACCCCTCAAGACGCCAAGGTTGTTCGGTGGTCGGACCCGGTCACAGGCAGAGTTATTGACGATGGCAATGTCGATACTTCTGCCGGAGAGGACCACCGTGGCATCAACAACGACTTGGAGGCAGAGGCGAGTCCCAAGGGGAAGGGGATGAGGAAAATCAGCAGCAGCTTGGCGTTGGAACTCTAG

Coding sequence (CDS)

ATGATGCAGTTGACTCGCAAGCCAACCCCTCAAGACGCCAAGGTTGTTCGGTGGTCGGACCCGGTCACAGGCAGAGTTATTGACGATGGCAATGTCGATACTTCTGCCGGAGAGGACCACCGTGGCATCAACAACGACTTGGAGGCAGAGGCGAGTCCCAAGGGGAAGGGGATGAGGAAAATCAGCAGCAGCTTGGCGTTGGAACTCTAG

Protein sequence

MMQLTRKPTPQDAKVVRWSDPVTGRVIDDGNVDTSAGEDHRGINNDLEAEASPKGKGMRKISSSLALEL
Homology
The following BLAST results are available for this feature:
BLAST of Lsi02G005790 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi02G005790 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi02G005790 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi02G005790 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..55

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G005790.1Lsi02G005790.1mRNA