Lsi02G005770 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGATCACTACCAAGTAATAAGCAATGCACTCAATGGTCCTCCATCATCACCCAGCAGTCTGATCGAAACTTCGGCCATTGTCAAAAGCTTCTCTTCCAATGAAGTTAAGTCCATTCAAGCAGAGCCACATACTCCAGAAGTAGTCAGTAGCCGTGGTAAAAGGCCTGCCACCGACAGCCCCCAACATGAAGCCCCACCTCAAAGGCAACGAACCGACAGGCCAGGGTTCGACCCATTGGATGGTCTGATAGTGAAGATGGAGGAAACGGTTACGATGCTGAAAAGAATGAGCGGGAAAAAGGATTTGACGAGTGATCCTTTGTTGGGTCGCTTTGTGTCTGCGCACACTGAGCTCATGGCTTGCACTGCCCAGCTTATAATGGCTAAATCAACCAGGAAAGCATCGAAAGTCAAACGCATTAAAGGAATGGCTGGAGAGAAGAACATGAACGAAATCTGA ATGGGTGATCACTACCAAGTAATAAGCAATGCACTCAATGGTCCTCCATCATCACCCAGCAGTCTGATCGAAACTTCGGCCATTGTCAAAAGCTTCTCTTCCAATGAAGTTAAGTCCATTCAAGCAGAGCCACATACTCCAGAAGTAGTCAGTAGCCGTGGTAAAAGGCCTGCCACCGACAGCCCCCAACATGAAGCCCCACCTCAAAGGCAACGAACCGACAGGCCAGGGTTCGACCCATTGGATGGTCTGATAGTGAAGATGGAGGAAACGGTTACGATGCTGAAAAGAATGAGCGGGAAAAAGGATTTGACGAGTGATCCTTTGTTGGGTCGCTTTGTGTCTGCGCACACTGAGCTCATGGCTTGCACTGCCCAGCTTATAATGGCTAAATCAACCAGGAAAGCATCGAAAGTCAAACGCATTAAAGGAATGGCTGGAGAGAAGAACATGAACGAAATCTGA ATGGGTGATCACTACCAAGTAATAAGCAATGCACTCAATGGTCCTCCATCATCACCCAGCAGTCTGATCGAAACTTCGGCCATTGTCAAAAGCTTCTCTTCCAATGAAGTTAAGTCCATTCAAGCAGAGCCACATACTCCAGAAGTAGTCAGTAGCCGTGGTAAAAGGCCTGCCACCGACAGCCCCCAACATGAAGCCCCACCTCAAAGGCAACGAACCGACAGGCCAGGGTTCGACCCATTGGATGGTCTGATAGTGAAGATGGAGGAAACGGTTACGATGCTGAAAAGAATGAGCGGGAAAAAGGATTTGACGAGTGATCCTTTGTTGGGTCGCTTTGTGTCTGCGCACACTGAGCTCATGGCTTGCACTGCCCAGCTTATAATGGCTAAATCAACCAGGAAAGCATCGAAAGTCAAACGCATTAAAGGAATGGCTGGAGAGAAGAACATGAACGAAATCTGA MGDHYQVISNALNGPPSSPSSLIETSAIVKSFSSNEVKSIQAEPHTPEVVSSRGKRPATDSPQHEAPPQRQRTDRPGFDPLDGLIVKMEETVTMLKRMSGKKDLTSDPLLGRFVSAHTELMACTAQLIMAKSTRKASKVKRIKGMAGEKNMNEI Homology
BLAST of Lsi02G005770 vs. ExPASy TrEMBL
Match: A0A5D3BJN2 (p55 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005530 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 8.3e-10 Identity = 60/145 (41.38%), Postives = 81/145 (55.86%), Query Frame = 0
BLAST of Lsi02G005770 vs. ExPASy TrEMBL
Match: A0A0A0LX14 (p55 OS=Cucumis sativus OX=3659 GN=Csa_1G059750 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 5.4e-09 Identity = 60/140 (42.86%), Postives = 78/140 (55.71%), Query Frame = 0
BLAST of Lsi02G005770 vs. NCBI nr
Match: KAA0056836.1 (p55 [Cucumis melo var. makuwa] >TYJ99337.1 p55 [Cucumis melo var. makuwa]) HSP 1 Score: 73.6 bits (179), Expect = 1.7e-09 Identity = 60/145 (41.38%), Postives = 81/145 (55.86%), Query Frame = 0
BLAST of Lsi02G005770 vs. NCBI nr
Match: KGN64496.1 (hypothetical protein Csa_013860 [Cucumis sativus]) HSP 1 Score: 70.9 bits (172), Expect = 1.1e-08 Identity = 60/140 (42.86%), Postives = 78/140 (55.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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