Lsi02G004150 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi02G004150
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr02: 3470739 .. 3474490 (-)
RNA-Seq ExpressionLsi02G004150
SyntenyLsi02G004150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGAATTGCTCAATTGCTTGTTTTATTTCCCCTTGATATTATGCTCAAGAACATTTTCTCTTATAGGATTCAGCTGTCTTTTAACTAAAAGCATAGTAGTTACTTTTTACAATATTTCAAAAGAAAAATACTTCTTAGGTGATGGGACTGATCAATACTTGTAAAGAATATTTATAGACCCAAAATTTTCCAGCTATTTCGCCAGCTAAAGGGCTGAAATTCTCTTGGCTTGCTCATGATTATAAAGTACACTCATCTAAAATTCTTAATTTGCATTACTGAAACATAGAAATAAACACTCGTGTTGTGTCGAATACCACATACATTATAATAATAATAATAATAATAAAGATTTGCTGGAAATGATTCTACTCTGAATCTGCTGAGTGAGTCTTAAAAAGTCTGATAAATCCTACCTATAGTACCACATCAAGGTAGCTGTTGTAATAATATTCTTATGTAAGCTGCAGTTACTAGTTAAAGATGTTCCAGTTTCTACCACGTTTGCAATGATACATCTATATATATATATATACGTATATGTAAAACAGCAGCATTTGAACACAAATGATTCCTCTGGCTTAACTGATATCTGAAATATTTTCCTATCAAAATCAAGCACCAGTCTTAGAACATTATGCTGATCGATACAACTTCCCCGGCAACCAATTAGAGATGAATATTAACTGCAGCACCACAGAAGCAATCACAGGTGATGGGAAGAGACCTAAAAAATGGTTGATGTGATTAATTGTTGTACAAAAGATGCTCTCTGATTCAACTCTTCACTGTTCTGGTTTCTTTCCAGCAACTGTGAACTATTACTGCAAAACCCGAAAAGCAAATTAGAAGTATAGCCATTAATATGTTGAGTTGAGCTATCACATCCCCTAAAGCACAGTCGACAAGTGAGGATCGAAATGGTATGCATAAGCAAGTTGATATCTTCATGGTGTAGAGTAAAACTAAACTCAAAAGGTGAGGCGATATCAAGATCGATCAAGTTTGGACCGTGTAAAAAATTGAATTTGGAACCAAACTGTATACTTGATAAGATGTTCCAAATATATTAGCTTAAGTTCGTATCAGTAGAATGAAAGTACTTGAAACAATTTCAATTGTCCAATCAAATTTGTCAGGAATCTTTTTCTTTTACTTTTACTTTACTTTTCTTGGATCCTTACAAACCACTATTGGAAAAGTACACTACAACCAGGAAAGAGGCTTCTCTATCTCCAAAGTTAAATGATCACAGTAAGTCTATCCATTAAACTTGAAGGTTAAACTTATTTAGCAAAAGACAGGCCAATAAAAATGAAAGGCCGAGTTTATGGACTTGATTTGTAGACTTACAAGATCAACCACCTTGAATGAATCCAATTATATTAGAACTAGTAATTGAAACTCACCTTTCGACATTAGCCGCAACGGAGGCATCGTTTTCTGAACGGTCATCCCTCTCGACAGATTCAGGGTCTGAGAAAGGAATGCTGCAGATAAAGGGTAGAAGGGGATCAGGTGCAGATCCATTTCTTTTTTCCCTGCTCTTTGTTATCAGCTTCTTGGAAATAAATGCAGAAGAGACAGATTTGTCAGGTTTTCTCCTCCTCTGCAATGATGGTAATATTTTGCTTTTAAGCAATTGCTCATAATTACAACCATGAAAGCAATGAGGTGAACAGAAAATACCTTTATTGAGCTTGAATGATGTGCTGTAAAATGCCCAATTACATCTTTCCCTAGACTGGCTGCACATAGAGGACAAACCTGAGAGGAAAGCAATGTCAAAGAGCAGCTCTTTCTTATTGAATCTAAAATCTTACTAAAACGCATCTTCCACTTTATATGGTTCTTGCTTTTGCTTTAGAGCTTCTCAAAAGTATAGCGAATAAAACATGAACGTCAAATCATTCCTTAATTCATTCAAATACAGATGGCAAATGAAACCTTATTTCAAGCAAAAACACTCAAAAGTTTCTCTAGCTTCAAATTGAAAAGAAAAATCTTAGCTTGTAAACTGAAACCTTTCAGTCTCACTTCATTGAACAGTTCATAATCAGTCATATAAACCAAGCAGCAAGCACAAATGACAAAACTGTCTATACATAAACAATTAATTACTCATACATCACAAGTAATCATTGAATGTAGAATAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACCCACCCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAAAATCAACCAAAAAAACCCCCCCAAATCTTCTGTTTACTAGCTAAATCAAGAGAAGAAAACCCCAAAAAGTAGGAAATGGAAGCAAAATCAAGAAACCCAGATGAGAAAATCAGTGAAAAGGTTGAAAAACACAAGTACCAGAATGAAGCATGGCGGCTTGGACAGCAGAAAGTTGGTCAGTGGGATGAACCCTTGAGGCCCAAAAATTGAACTCCATAGCTTGATTCTGTGTTACAGAGCAAGTCCGAAGTCAGATTGTGAGAGGACAAGTGTGTGA

mRNA sequence

ATGGTTGAATTGCTCAATTGCTTGTTTTATTTCCCCTTGATATTATGCTCAAGAACATTTTCTCTTATAGGATTCAGCTGTCTTTTAACTAAAAGCATAGTAGTTACTTTTTACAATATTTCAAAAGAAAAATACTTCTTAGGTGATGGGACTGATCAATACTTCAACTCACAGTCGACAAGTGAGGATCGAAATGGTATGCATAAGCAAGTTGATATCTTCATGGAATCTTTTTCTTTTACTTTTACTTTACTTTTCTTGGATCCTTACAAACCACTATTGGAAAAGTACACTACAACCAGGAAAGAGGCTTCTCTATCTCCAAAGTTAAATGATCACAAACTAGTAATTGAAACTCACCTTTCGACATTAGCCGCAACGGAGGCATCGTTTTCTGAACGGTCATCCCTCTCGACAGATTCAGGGTCTGAGAAAGGAATGCTGCAGATAAAGGGTAGAAGGGGATCAGGTGCAGATCCATTTCTTTTTTCCCTGCTCTTTGTTATCAGCTTCTTGGAAATAAATGCAGAAGAGACAGATTTGTCAGGTTTTCTCCTCCTCTGCAATGATGAGCTTCTCAAAACTAAATCAAGAGAAGAAAACCCCAAAAAAGCAAGTCCGAAGTCAGATTGTGAGAGGACAAGTGTGTGA

Coding sequence (CDS)

ATGGTTGAATTGCTCAATTGCTTGTTTTATTTCCCCTTGATATTATGCTCAAGAACATTTTCTCTTATAGGATTCAGCTGTCTTTTAACTAAAAGCATAGTAGTTACTTTTTACAATATTTCAAAAGAAAAATACTTCTTAGGTGATGGGACTGATCAATACTTCAACTCACAGTCGACAAGTGAGGATCGAAATGGTATGCATAAGCAAGTTGATATCTTCATGGAATCTTTTTCTTTTACTTTTACTTTACTTTTCTTGGATCCTTACAAACCACTATTGGAAAAGTACACTACAACCAGGAAAGAGGCTTCTCTATCTCCAAAGTTAAATGATCACAAACTAGTAATTGAAACTCACCTTTCGACATTAGCCGCAACGGAGGCATCGTTTTCTGAACGGTCATCCCTCTCGACAGATTCAGGGTCTGAGAAAGGAATGCTGCAGATAAAGGGTAGAAGGGGATCAGGTGCAGATCCATTTCTTTTTTCCCTGCTCTTTGTTATCAGCTTCTTGGAAATAAATGCAGAAGAGACAGATTTGTCAGGTTTTCTCCTCCTCTGCAATGATGAGCTTCTCAAAACTAAATCAAGAGAAGAAAACCCCAAAAAAGCAAGTCCGAAGTCAGATTGTGAGAGGACAAGTGTGTGA

Protein sequence

MVELLNCLFYFPLILCSRTFSLIGFSCLLTKSIVVTFYNISKEKYFLGDGTDQYFNSQSTSEDRNGMHKQVDIFMESFSFTFTLLFLDPYKPLLEKYTTTRKEASLSPKLNDHKLVIETHLSTLAATEASFSERSSLSTDSGSEKGMLQIKGRRGSGADPFLFSLLFVISFLEINAEETDLSGFLLLCNDELLKTKSREENPKKASPKSDCERTSV
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..216

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G004150.1Lsi02G004150.1mRNA