Lsi02G003410 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi02G003410
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr02: 2906145 .. 2912817 (-)
RNA-Seq ExpressionLsi02G003410
SyntenyLsi02G003410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAATTTCAGCTCTCATCTGCTCCCGCCCGTTGTTCTTCGCTGCTGCTGCAACTCTCCCAGTGAATTCAATAAGCAAATCGGAGAATTTGGTTCTGAAATTTTCAGTGTTTTTTTTTGGTTATAATCTCAATCTGTTCTTCGTTGCTTGTTAATTGCTTTCAATCTTGTCTTTGAAGGGAAACGATTACGGCTGGTAAACTGCAATTCATTTATTTCATGTACTCAAGTCGCTAATGAAAACTAGATTCCTGTAATGGCGCTCTCACCGTATTTATCAGTGCCGAATCCGTTCAAAACTTCTACGACGTTTCAGAAACGGTATTTAGAGTGTCAACAACTTCCATTTCTTTCAAAACTTTCCAATTTCAGTGTTCGCCGTAGATTTTTCTCAGATGACTGGAGCTTGTCCTCCGACGTGGGGAAGTGCAGAGCGAAGCCGAAGGATCTTGTTCTTGGAAATCCATCGGTAATTGTTGAGAAAGGCAAGTATAGCTATGACGTTGAAACCCTAATTAATAAGCTCAGTAGCCTCCCGCCACGAGGTAGCATAGCTCGTTGTCTCGATATCTTCAAGAATAGGCTGTCGCTCAATGACTTCAGCTTGGTTTTCAAGGAATTCGCGGCGCGCGGGGACTGGCAACGCTCGTTACGCTTGTTCAAATACATGCAGCGTCAGATATGGTGCAAGCCGAACGAGCACATCTACACTATCATGATCAGCTTGCTCGGCCGCGAAGGATTGCTAGAGAAATGTAGTGAGATATTCGATGAAATGGCGAGCCAGGGTGTGATACGCAGCGTTTTTTCTTATACCGCTTTGATAAACGCCTACGGGCGCAATGGTCAGTACGAAACCTCACTTGAACTTCTTGAAAGGATGAAAAGAGAGAGAGTGTCGCCTAATATATTGACTTACAATACCGTGATAAATGCTTGTGCTAGAGGTGATTTGGATTGGGAGGGATTGTTGGGATTGTTTGCCGAGATGAGGCATGAAGGGGTTCAACCTGATCTGGTTACTTATAATACTTTGCTTAGTGCATGTGCTGCCCGCGGTTTAGGTGATGAGGCAGAGATGGTCTTCAAGACTATGATAGAGGGGGGGATAGTCCCTGAGATAACAACGTATAGTTATATTGTTGAAACATTTGGAAAATTGGGTAAGCTCGAGAAAGTTGCTATGCTGCTAAAAGAAATGGAGTCCGAAGGGTATTTGCCTGATATATCATCCTACAATGTGTTAATAGAGGCACATGCAAAATCAGGGTCGATTAAGGAGGCAATGGACGTGTTTAAGCAGATGCAAGCAGCAGGATGTGTGCCAAATGCATCCACTTATAGTATTCTGTTGAATTTATATGGGAAACATGGGAGGTATGATGATGTACGAGAGCTTTTTCTTGAAATGAAAGAGAGTAGTGCTGAGCCAGATGCAACTACTTACAACATTCTCATACGAGTATTTGGAGAGGGTGGATACTTCAAGGAGGTTGTAACTCTGTTTCATGATTTGGTGGAGGAGAAGATTGACCCAAATATGGAGACATATGAGGGGTTAGTATTTGCTTGTGGAAAGGGAGGGCTGCACGAGGATGCCAAGAAAATTTTACTTCACATGAATGAGAAAGGAATGGTTCCAAGTTCTAAAGCATATAGTGGTCTGATTGAAGCATACGGACAGGCTGCATTGTATGATGAAGCTCTTGTTGCCTTTAACACAATGAACGAAGTGGGAAGTAAATCAACTGTTGATACCTACAATTCGTTAATTCACACATTCGCTAGAGGTGGACTATACAAGGAGTTTGAAGCAATCTTATTGAGAATGAGAGAATATGGCATTTCAAGGAATACCAAGTCATTTAGTGGTATTATTGAAGGTTATAGGCAAAGTGGTCAGTTTGAAGAAGCTATAAAGGCCTTTGTTGAGATGGAAAAAATGAGATGTGAACCTGATGAGCAGACCCTTGAGGCAGTTTTAGGTGTTTATTGCTTTGCAGGTCTTGTGGATGAGAGCAAGGAGCAGTTTCAAGAAATTAAAGCTTCAGGAATATTGCCTAGTGTATTATGCTACTGCATGATGCTGGCAGTTTATGCCAAGAATGGCAGGTAATGATTATTATGTATATATACTTGTTCATGTAAGTTATTCTCGTTATCAACTTATGTTTTCTTAATTTTATTTCCAGTTGGTATAAACTGTACGGGGTACTTATCTAGAATTCTGCAGGCATTGGAGGTTGGCTAGTTAGAATGTGTGTGGTTATATGAGATGATTGGAGTTTGTTAGAGTTTTTCATGGGGCATTGTTGGTGGCCAACAGTTATAAATAAGAACAGGAGCAGGGAGGAGAGGGGAGGTGGGCTCAAGAGAGAGATATTCAAGTTTCTTAAATTAAACAGTTATATTTGAATCTTGAAATAGATTATATTATTATTTTCATTTAAAAAAATTTATTATTTTGTTCTCTCTCAGCTCTAAGAATTATATTCATAAATCATAGGCTTTATATGATCTTGAGAACTTGGAGATTGGTCCACACTAAATCAGCTTTGGTGCATGACATAAAATTACCGTAAGAAACTACCAATTAAGGTTGTGATACATATAGTTTGGTTGTATCTTGCTGTAAATGCTCCCCTATCCTTCACTACTATAATTTTTTCTCCCTTCTCTCTAATTGGAGAGGTCTTTTGTAATACTCCACATGGGATCTCTTCCTTTTCTAATTTCATACTATCAATGACATTGTTACTTTATCAAATGAAAAAAAAACATATATATATATAGGATGTGATACATTATGGAAATGAAAGACGAGCTAATTTATTTATAGGGTGTAGTGTCTTATCAACTCGTAAGATATAGGAGGTTTATGTGAGATCTTTGTTGTCTATTCCTAGGTGTCAGCTTTTTATATTATTGCATAGCATAAGGAGATCTTCGGGAGCTGCTTCAAGTTGCATGACTAAAATGGCTATGCCAAGCCATAAACTTTCTGGGGTTCACTTGCTTAGTAGATTGATAGTTAGAGGACTTAATGTAGGCATCCCAGAGGGTTCCGAGTTGGGTAGAAACTCCCTCCCTATCATTTGTCTCCAGTTCATGGATAGGCTATCCTCTTGTCTTCCGTAGAAAAATTGTTGATCTATGAAAATCATATATTTTCTTGAGGGGCCCTAAAATGGCGTTTTTAATCTGAAATAGTAATTGGCCTCGAGTAAAAATTGTGGCGGGGAACCGAGAAAATACCAAATTCTCAGACAATTGGAAAGATACAGAAACTCTCTCTAGTCAACAGTTTATACTATTTCTTGTACTTTCTGATCACCAATATCAATGGTCTCTACATCAGCATAACGTGGAATTCCTTAAGTTAAACTTGGGATTTAACACGAGAAGAAGTCTGATGGCTTGGAAGTTGGAGAATGGATATTCCTCCTGGACGCCCTTGGTGGCTGTGTGTAAACCTATTCTTTCAGTTGCAAATTCTTCTTGAAGATTTCACTGAGAGTACTCAAATCCTTGACCAAAACCTTTGGAAATAGGTCTGGAAGGATAAATACCCAAGGCAAAATTTAAAGGAAAAGTTCAGACCTCTGGATTTCATCCCACTGCTCTAAGATGTTGAAAGTCAACAGGGAGACCCAATAATCTGATTGTTCTTGTCCCAAGGCCTTTGGATTATGCGATTAAATTTTGGTAATTTTGGCTGGCCTGATGCTTTTCTTAGGACCATTACCAACCTACTTCACTTCCTCTTCGGAGGACATCTGGATGAGATTATTTTTGTGGTTGCTTTGCTACTTGGTGTAAACTTAACAATCTTTTTGTAATTATAGTTCAACCTCTGTTTGTGCTAATTGTACGTTCTTTGTATCTTCCTTAGCTTGGATTGGGGCGTTTTCTAAAAGGAAAAGCTTAAACTTTCTGCACTATCGCATTTGTATCGGTATTACTGGTTGATAGATCCTCTTAATTTTTAATAGGGCAATAAATGCCAAAGTTTAGATAAACTTTGAAAAAAGAAAAGAAAATATAAATACCCTTTCCTTTTTCTTTTGATGTTGCAGTGTCTGCAAAATAATCTGATTTGCATCTAGAACATTCTTCTTTCTCAAAATCCCTCATTTCATGCAACATGGTCATGACCTTCGCATGTTTATTGGCCTCGTGTAAGAAAGAAATTCATTGCATGGACCGTGAATTCTATGGTCATTTATAGATGTACACCAAATTAGAGTTATAGGGAAGCCTCTTACAAAAAAAGAAAAAACTTTTGTTTGTTGACGTTAGTTTGTTTACTTTTACCTTGTATGACATTATGTTTTTGTCAGGGTTGACATTTTTGTTTGATTATTTCCAGCAATTATCACTAATTAACTATCATGGAAAAATTGAAGTAATATCTGGTTTGAAATCTTACAGTCCTAAAGTTCTCACTTCATCAAATTTGATTTTTGAACATTCGATCTTCTAGTTGATTGAATTTACAAATACTTTATTTTAAGGCACTCTCTTACATCTCAGACTCCATTCTTTCCAGGTGGGATGATGCCTATGAATTACTCGATGAGATGATTAAAAACAGGGTATCTAGTATTCATCAAGTCATTGGCCAGATGATCAAGGGAGATTACGATGATGATTCTAATTGGCAGATGGTTGAGTATGTTTTTGACAAACTTAACGCTGAAGGGTGTGGATTGGGAATGAGATTTTACAATACACTGCTAGAAGCACTTTGGTGGCTTGGCCAGAAAGGACGTGCAGCGAGGGTTCTCACTGAAGCAACAAAACGAGGCCTTTTCCCTGAACTTTTCCGCAAAAGCAAACTTGTGTGGTCCGTGGATGTGCACAGGTATGATAAGGATAAGTTTTTCTTCCATGCTGACTACCTGATACCTGTGCTTAAGTTTATACTAATCTGACGTCTGGCCTTTCAACAGAATGTGGGAAGGTGGTGCATATACTGCAATATCACTTTGGATTAACAAAATGAATGAAATGCTTATGGACGGGGAGGATCTCCCTCAGCTTGCAGCTGTTGTGGTTGGGTAAGCTTCATTTATCTTCCAATCAATTTAATCAAGGTTAACTTTTCTGAAATGAAGTGTCATGCATGGTGGAGGCATATATGATTATAAAAGGGTTTCCATAGTCCAGCCAAAGCAAATCTTCTCCCTTTGAGCTTCTCGGACTTGACTAATATTGTGAAGCTGTAATGTGCACATAGCTAATATGCTGGTTAAAAAATGCCTTCTTTAGTTTGGCATCCTAAATTACACGTAGGTTAGCACTGAAATTTCCGGACGTTGTTAATGAATGGAACTAAAGTATAGAGGGGGGAAGAACGAGCTTCAATCCAAAGGAGTTGCATTAACGTTTCCAATTGGACAGAAGTGTTGCATGACTATGAGAATGAAAAAGACTTGAACATTTGCACACCAAAACATTACAAGAAGTACAATATTTATAATGTCAAAAAGTCTTTCAAAAAACTGCTCCTTTTCAGCTAATAATCTCTGATTTCGTCCTATCCATATGGCCGGCCTGCGAGTGTGAGAAATAGTAGACAGCTCAAATCAATAGGCAAAGCCACTGTCAAGTCGAAAACCGAAAGTGACCCCAAATTTTTTTTGCCTACTGGGCTGGTGAGGAATAAGTGTCCTTGTGACTCTGTACTTTGTTTGCAAAGGGCGCGCCAAGTCTTGAGAAACCAACTCTTTTCTCATTGCACTATATGGAATTTTACTTGCCTTGTTGTACTTTTACAGTTTTACAAGGGTTCATTGATTATTTGTCAACCGAATATTTTCAAATTTTCAGCAGGGGGTGGTCGGAGAAAGACTCAGCCGCACAAAACTTGCCTATTGCAAGGGCTGTCTATTCATTCCTGCAGGATAATGTGTCGTCATCCTTCACATTTCCTAGGTGGAACAACGGCCGAATCGTCTGCCAACAGTCTCAACTAAAGCAGCTCCTTTCAGAAGCAGAAGCATCATCTAGTGAAATTATTACTCTAAATAATTCCCCATTAAAGCTTCCAGAAGCAAAGATATCAAGATCTGGTATAAACAATGACAAATACAATGATGTTGATTCTAAATCAAGTAACAGGACAGGAACTGAGCTTCTGACTACAACTGTTTGAATGAAATACAAGGTTGAACATCTAGTTTTCAGGTTTTGAAACTCATCACCTCCCATTTTTATTGGAAGGATGTGATCGATGGGGCTCTTCGACTTCGAAAGAACTTAACCAAATGATAGTATCACAGCATTCAGGTGGTGGCTGAGTTTTGTTGCAACATTGCTTGCGACGATTCACTTATAAGAGGCCAATTTGATCGATTCGAGGAAGATGGTGCTTGCCCAGATAAGAGGTCAGTGTTTTTGTAGCTTTAGAATTAATATTCTTTACTGGAAAAGGAAAAGCTGTTTATTAGTAATTCTTAGACCAGCGGTTTAAATCTCTGTCAACTAATCAGGGAGATGTAATATCTTTTAGATTTGGAATTCCGCAACTATGCATAGAAAATATGGAGGATTAGCAAAAATGCCTTCACCTTTTTTGCTGACTCTTCTACATTTTAGGTCGGTTTAATCTTCACTTGGTTCTTATGTTCGATTTCGAGTTTAGTTTCTATATAGTCCACGTTATATTTTTAA

mRNA sequence

CCAATTTCAGCTCTCATCTGCTCCCGCCCGTTGTTCTTCGCTGCTGCTGCAACTCTCCCAGTGAATTCAATAAGCAAATCGGAGAATTTGGTTCTGAAATTTTCAGTGTTTTTTTTTGGTTATAATCTCAATCTGTTCTTCGTTGCTTGTTAATTGCTTTCAATCTTGTCTTTGAAGGGAAACGATTACGGCTGGTAAACTGCAATTCATTTATTTCATGTACTCAAGTCGCTAATGAAAACTAGATTCCTGTAATGGCGCTCTCACCGTATTTATCAGTGCCGAATCCGTTCAAAACTTCTACGACGTTTCAGAAACGGTATTTAGAGTGTCAACAACTTCCATTTCTTTCAAAACTTTCCAATTTCAGTGTTCGCCGTAGATTTTTCTCAGATGACTGGAGCTTGTCCTCCGACGTGGGGAAGTGCAGAGCGAAGCCGAAGGATCTTGTTCTTGGAAATCCATCGGTAATTGTTGAGAAAGGCAAGTATAGCTATGACGTTGAAACCCTAATTAATAAGCTCAGTAGCCTCCCGCCACGAGGTAGCATAGCTCGTTGTCTCGATATCTTCAAGAATAGGCTGTCGCTCAATGACTTCAGCTTGGTTTTCAAGGAATTCGCGGCGCGCGGGGACTGGCAACGCTCGTTACGCTTGTTCAAATACATGCAGCGTCAGATATGGTGCAAGCCGAACGAGCACATCTACACTATCATGATCAGCTTGCTCGGCCGCGAAGGATTGCTAGAGAAATGTAGTGAGATATTCGATGAAATGGCGAGCCAGGGTGTGATACGCAGCGTTTTTTCTTATACCGCTTTGATAAACGCCTACGGGCGCAATGGTCAGTACGAAACCTCACTTGAACTTCTTGAAAGGATGAAAAGAGAGAGAGTGTCGCCTAATATATTGACTTACAATACCGTGATAAATGCTTGTGCTAGAGGTGATTTGGATTGGGAGGGATTGTTGGGATTGTTTGCCGAGATGAGGCATGAAGGGGTTCAACCTGATCTGGTTACTTATAATACTTTGCTTAGTGCATGTGCTGCCCGCGGTTTAGGTGATGAGGCAGAGATGGTCTTCAAGACTATGATAGAGGGGGGGATAGTCCCTGAGATAACAACGTATAGTTATATTGTTGAAACATTTGGAAAATTGGGTAAGCTCGAGAAAGTTGCTATGCTGCTAAAAGAAATGGAGTCCGAAGGGTATTTGCCTGATATATCATCCTACAATGTGTTAATAGAGGCACATGCAAAATCAGGGTCGATTAAGGAGGCAATGGACGTGTTTAAGCAGATGCAAGCAGCAGGATGTGTGCCAAATGCATCCACTTATAGTATTCTGTTGAATTTATATGGGAAACATGGGAGGTATGATGATGTACGAGAGCTTTTTCTTGAAATGAAAGAGAGTAGTGCTGAGCCAGATGCAACTACTTACAACATTCTCATACGAGTATTTGGAGAGGGTGGATACTTCAAGGAGGTTGTAACTCTGTTTCATGATTTGGTGGAGGAGAAGATTGACCCAAATATGGAGACATATGAGGGGTTAGTATTTGCTTGTGGAAAGGGAGGGCTGCACGAGGATGCCAAGAAAATTTTACTTCACATGAATGAGAAAGGAATGGTTCCAAGTTCTAAAGCATATAGTGGTCTGATTGAAGCATACGGACAGGCTGCATTGTATGATGAAGCTCTTGTTGCCTTTAACACAATGAACGAAGTGGGAAGTAAATCAACTGTTGATACCTACAATTCGTTAATTCACACATTCGCTAGAGGTGGACTATACAAGGAGTTTGAAGCAATCTTATTGAGAATGAGAGAATATGGCATTTCAAGGAATACCAAGTCATTTAGTGGTATTATTGAAGGTTATAGGCAAAGTGGTCAGTTTGAAGAAGCTATAAAGGCCTTTGTTGAGATGGAAAAAATGAGATGTGAACCTGATGAGCAGACCCTTGAGGCAGTTTTAGGTGTTTATTGCTTTGCAGGTCTTGTGGATGAGAGCAAGGAGCAGTTTCAAGAAATTAAAGCTTCAGGAATATTGCCTAGTGTATTATGCTACTGCATGATGCTGGCAGTTTATGCCAAGAATGGCAGGTGGGATGATGCCTATGAATTACTCGATGAGATGATTAAAAACAGGGTATCTAGTATTCATCAAGTCATTGGCCAGATGATCAAGGGAGATTACGATGATGATTCTAATTGGCAGATGGTTGAGTATGTTTTTGACAAACTTAACGCTGAAGGGTGTGGATTGGGAATGAGATTTTACAATACACTGCTAGAAGCACTTTGGTGGCTTGGCCAGAAAGGACGTGCAGCGAGGGTTCTCACTGAAGCAACAAAACGAGGCCTTTTCCCTGAACTTTTCCGCAAAAGCAAACTTGTGTGGTCCGTGGATGTGCACAGAATGTGGGAAGGTGGTGCATATACTGCAATATCACTTTGGATTAACAAAATGAATGAAATGCTTATGGACGGGGAGGATCTCCCTCAGCTTGCAGCTGTTGTGGTTGGGGGGTGGTCGGAGAAAGACTCAGCCGCACAAAACTTGCCTATTGCAAGGGCTGTCTATTCATTCCTGCAGGATAATGTGTCGTCATCCTTCACATTTCCTAGGTGGAACAACGGCCGAATCGTCTGCCAACAGTCTCAACTAAAGCAGCTCCTTTCAGAAGCAGAAGCATCATCTAGTGAAATTATTACTCTAAATAATTCCCCATTAAAGCTTCCAGAAGCAAAGATATCAAGATCTGGTATAAACAATGACAAATACAATGATGTTGATTCTAAATCAAGTAACAGGACAGGAACTGAGCTTCTGACTACAACTGTTTGAATGAAATACAAGGTTGAACATCTAGTTTTCAGGTTTTGAAACTCATCACCTCCCATTTTTATTGGAAGGATGTGATCGATGGGGCTCTTCGACTTCGAAAGAACTTAACCAAATGATAGTATCACAGCATTCAGGTGGTGGCTGAGTTTTGTTGCAACATTGCTTGCGACGATTCACTTATAAGAGGCCAATTTGATCGATTCGAGGAAGATGGTGCTTGCCCAGATAAGAGGTCAGTGTTTTTGTAGCTTTAGAATTAATATTCTTTACTGGAAAAGGAAAAGCTGTTTATTAGTAATTCTTAGACCAGCGGTTTAAATCTCTGTCAACTAATCAGGGAGATGTAATATCTTTTAGATTTGGAATTCCGCAACTATGCATAGAAAATATGGAGGATTAGCAAAAATGCCTTCACCTTTTTTGCTGACTCTTCTACATTTTAGGTCGGTTTAATCTTCACTTGGTTCTTATGTTCGATTTCGAGTTTAGTTTCTATATAGTCCACGTTATATTTTTAA

Coding sequence (CDS)

ATGGCGCTCTCACCGTATTTATCAGTGCCGAATCCGTTCAAAACTTCTACGACGTTTCAGAAACGGTATTTAGAGTGTCAACAACTTCCATTTCTTTCAAAACTTTCCAATTTCAGTGTTCGCCGTAGATTTTTCTCAGATGACTGGAGCTTGTCCTCCGACGTGGGGAAGTGCAGAGCGAAGCCGAAGGATCTTGTTCTTGGAAATCCATCGGTAATTGTTGAGAAAGGCAAGTATAGCTATGACGTTGAAACCCTAATTAATAAGCTCAGTAGCCTCCCGCCACGAGGTAGCATAGCTCGTTGTCTCGATATCTTCAAGAATAGGCTGTCGCTCAATGACTTCAGCTTGGTTTTCAAGGAATTCGCGGCGCGCGGGGACTGGCAACGCTCGTTACGCTTGTTCAAATACATGCAGCGTCAGATATGGTGCAAGCCGAACGAGCACATCTACACTATCATGATCAGCTTGCTCGGCCGCGAAGGATTGCTAGAGAAATGTAGTGAGATATTCGATGAAATGGCGAGCCAGGGTGTGATACGCAGCGTTTTTTCTTATACCGCTTTGATAAACGCCTACGGGCGCAATGGTCAGTACGAAACCTCACTTGAACTTCTTGAAAGGATGAAAAGAGAGAGAGTGTCGCCTAATATATTGACTTACAATACCGTGATAAATGCTTGTGCTAGAGGTGATTTGGATTGGGAGGGATTGTTGGGATTGTTTGCCGAGATGAGGCATGAAGGGGTTCAACCTGATCTGGTTACTTATAATACTTTGCTTAGTGCATGTGCTGCCCGCGGTTTAGGTGATGAGGCAGAGATGGTCTTCAAGACTATGATAGAGGGGGGGATAGTCCCTGAGATAACAACGTATAGTTATATTGTTGAAACATTTGGAAAATTGGGTAAGCTCGAGAAAGTTGCTATGCTGCTAAAAGAAATGGAGTCCGAAGGGTATTTGCCTGATATATCATCCTACAATGTGTTAATAGAGGCACATGCAAAATCAGGGTCGATTAAGGAGGCAATGGACGTGTTTAAGCAGATGCAAGCAGCAGGATGTGTGCCAAATGCATCCACTTATAGTATTCTGTTGAATTTATATGGGAAACATGGGAGGTATGATGATGTACGAGAGCTTTTTCTTGAAATGAAAGAGAGTAGTGCTGAGCCAGATGCAACTACTTACAACATTCTCATACGAGTATTTGGAGAGGGTGGATACTTCAAGGAGGTTGTAACTCTGTTTCATGATTTGGTGGAGGAGAAGATTGACCCAAATATGGAGACATATGAGGGGTTAGTATTTGCTTGTGGAAAGGGAGGGCTGCACGAGGATGCCAAGAAAATTTTACTTCACATGAATGAGAAAGGAATGGTTCCAAGTTCTAAAGCATATAGTGGTCTGATTGAAGCATACGGACAGGCTGCATTGTATGATGAAGCTCTTGTTGCCTTTAACACAATGAACGAAGTGGGAAGTAAATCAACTGTTGATACCTACAATTCGTTAATTCACACATTCGCTAGAGGTGGACTATACAAGGAGTTTGAAGCAATCTTATTGAGAATGAGAGAATATGGCATTTCAAGGAATACCAAGTCATTTAGTGGTATTATTGAAGGTTATAGGCAAAGTGGTCAGTTTGAAGAAGCTATAAAGGCCTTTGTTGAGATGGAAAAAATGAGATGTGAACCTGATGAGCAGACCCTTGAGGCAGTTTTAGGTGTTTATTGCTTTGCAGGTCTTGTGGATGAGAGCAAGGAGCAGTTTCAAGAAATTAAAGCTTCAGGAATATTGCCTAGTGTATTATGCTACTGCATGATGCTGGCAGTTTATGCCAAGAATGGCAGGTGGGATGATGCCTATGAATTACTCGATGAGATGATTAAAAACAGGGTATCTAGTATTCATCAAGTCATTGGCCAGATGATCAAGGGAGATTACGATGATGATTCTAATTGGCAGATGGTTGAGTATGTTTTTGACAAACTTAACGCTGAAGGGTGTGGATTGGGAATGAGATTTTACAATACACTGCTAGAAGCACTTTGGTGGCTTGGCCAGAAAGGACGTGCAGCGAGGGTTCTCACTGAAGCAACAAAACGAGGCCTTTTCCCTGAACTTTTCCGCAAAAGCAAACTTGTGTGGTCCGTGGATGTGCACAGAATGTGGGAAGGTGGTGCATATACTGCAATATCACTTTGGATTAACAAAATGAATGAAATGCTTATGGACGGGGAGGATCTCCCTCAGCTTGCAGCTGTTGTGGTTGGGGGGTGGTCGGAGAAAGACTCAGCCGCACAAAACTTGCCTATTGCAAGGGCTGTCTATTCATTCCTGCAGGATAATGTGTCGTCATCCTTCACATTTCCTAGGTGGAACAACGGCCGAATCGTCTGCCAACAGTCTCAACTAAAGCAGCTCCTTTCAGAAGCAGAAGCATCATCTAGTGAAATTATTACTCTAAATAATTCCCCATTAAAGCTTCCAGAAGCAAAGATATCAAGATCTGGTATAAACAATGACAAATACAATGATGTTGATTCTAAATCAAGTAACAGGACAGGAACTGAGCTTCTGACTACAACTGTTTGA

Protein sequence

MALSPYLSVPNPFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSLSSDVGKCRAKPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILLRMREYGISRNTKSFSGIIEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFQEIKASGILPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGLGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPELFRKSKLVWSVDVHRMWEGGAYTAISLWINKMNEMLMDGEDLPQLAAVVVGGWSEKDSAAQNLPIARAVYSFLQDNVSSSFTFPRWNNGRIVCQQSQLKQLLSEAEASSSEIITLNNSPLKLPEAKISRSGINNDKYNDVDSKSSNRTGTELLTTTV
Homology
BLAST of Lsi02G003410 vs. ExPASy Swiss-Prot
Match: Q9S7Q2 (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC2 PE=2 SV=1)

HSP 1 Score: 1232.2 bits (3187), Expect = 0.0e+00
Identity = 619/874 (70.82%), Postives = 720/874 (82.38%), Query Frame = 0

Query: 7   LSVPNPFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRF---------FSDDWSLSSDVGK 66
           L++PNP                L FL + S+F   RRF            +    S  GK
Sbjct: 3   LAIPNP------------NSHHLSFLIQNSSFIGNRRFADGNRLRFLSGGNRKPCSFSGK 62

Query: 67  CRAKPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSL 126
            +AK KDLVLGNPSV VEKGKYSYDVE+LINKLSSLPPRGSIARCLDIFKN+LSLNDF+L
Sbjct: 63  IKAKTKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFAL 122

Query: 127 VFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQ 186
           VFKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLL+KC E+FDEM SQ
Sbjct: 123 VFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQ 182

Query: 187 GVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEG 246
           GV RSVFSYTALINAYGRNG+YETSLELL+RMK E++SP+ILTYNTVINACARG LDWEG
Sbjct: 183 GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEG 242

Query: 247 LLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVE 306
           LLGLFAEMRHEG+QPD+VTYNTLLSACA RGLGDEAEMVF+TM +GGIVP++TTYS++VE
Sbjct: 243 LLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVE 302

Query: 307 TFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVP 366
           TFGKL +LEKV  LL EM S G LPDI+SYNVL+EA+AKSGSIKEAM VF QMQAAGC P
Sbjct: 303 TFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTP 362

Query: 367 NASTYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLF 426
           NA+TYS+LLNL+G+ GRYDDVR+LFLEMK S+ +PDA TYNILI VFGEGGYFKEVVTLF
Sbjct: 363 NANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLF 422

Query: 427 HDLVEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSKAYSGLIEAYGQA 486
           HD+VEE I+P+METYEG++FACGKGGLHEDA+KIL +M    +VPSSKAY+G+IEA+GQA
Sbjct: 423 HDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQA 482

Query: 487 ALYDEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILLRMREYGISRNTKSF 546
           ALY+EALVAFNTM+EVGS  +++T++SL+++FARGGL KE EAIL R+ + GI RN  +F
Sbjct: 483 ALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTF 542

Query: 547 SGIIEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFQEIKA 606
           +  IE Y+Q G+FEEA+K +V+MEK RC+PDE+TLEAVL VY FA LVDE +EQF+E+KA
Sbjct: 543 NAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKA 602

Query: 607 SGILPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQ 666
           S ILPS++CYCMMLAVY K  RWDD  ELL+EM+ NRVS+IHQVIGQMIKGDYDDDSNWQ
Sbjct: 603 SDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQ 662

Query: 667 MVEYVFDKLNAEGCGLGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPELFRKSKLV 726
           +VEYV DKLN+EGCGLG+RFYN LL+ALWWLGQK RAARVL EATKRGLFPELFRK+KLV
Sbjct: 663 IVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKLV 722

Query: 727 WSVDVHRMWEGGAYTAISLWINKMNEMLMDGEDLPQLAAVV-VGGWSEKDSAAQNLPIAR 786
           WSVDVHRM EGG YTA+S+W+N +N+ML+ G DLPQLA VV V G  EK SAA+  PIA+
Sbjct: 723 WSVDVHRMSEGGMYTALSVWLNDINDMLLKG-DLPQLAVVVSVRGQLEKSSAARESPIAK 782

Query: 787 AVYSFLQDNVSSSFTFPRWNNGRIVCQQSQLKQLLSEAEASSSE-----IITLNNSPLKL 846
           A +SFLQD+VSSSF+F  WN GRI+CQ+SQLKQLLS  E +S E     ++ L NSP+  
Sbjct: 783 AAFSFLQDHVSSSFSFTGWNGGRIMCQRSQLKQLLSTKEPTSEESENKNLVALANSPIFA 842

Query: 847 PEAKISRSGINNDKYNDVDSKSSNRTGTELLTTT 866
              + S S   N   N    ++  RT  EL  +T
Sbjct: 843 AGTRASTSSDTNHSGNPTQRRT--RTKKELAGST 861

BLAST of Lsi02G003410 vs. ExPASy Swiss-Prot
Match: Q9SIC9 (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g31400 PE=2 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 9.8e-81
Identity = 190/709 (26.80%), Postives = 351/709 (49.51%), Query Frame = 0

Query: 113 NDFSLVFKEFAARGDWQRSLRLFKY-MQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIF 172
           +D + + +E   R +  +++  +++ ++R+        + + MIS LGR G +     IF
Sbjct: 197 DDCTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIF 256

Query: 173 DEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARG 232
           +   + G   +V++++ALI+AYGR+G +E ++ +   MK   + PN++TYN VI+AC +G
Sbjct: 257 ETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKG 316

Query: 233 DLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITT 292
            ++++ +   F EM+  GVQPD +T+N+LL+ C+  GL + A  +F  M    I  ++ +
Sbjct: 317 GMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFS 376

Query: 293 YSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQ 352
           Y+ +++   K G+++    +L +M  +  +P++ SY+ +I+  AK+G   EA+++F +M+
Sbjct: 377 YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436

Query: 353 AAGCVPNASTYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFK 412
             G   +  +Y+ LL++Y K GR ++  ++  EM     + D  TYN L+  +G+ G + 
Sbjct: 437 YLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD 496

Query: 413 EVVTLFHDLVEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSKAYSGLI 472
           EV  +F ++  E + PN+ TY  L+    KGGL+++A +I       G+      YS LI
Sbjct: 497 EVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556

Query: 473 EAYGQAALYDEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILLRMREYG-- 532
           +A  +  L   A+   + M + G    V TYNS+I  F R        A + R  +Y   
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR-------SATMDRSADYSNG 616

Query: 533 ----ISRNTKSFSGIIEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLV 592
                S +  S     EG R    F +            CE   Q L  +L         
Sbjct: 617 GSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCIL--------- 676

Query: 593 DESKEQFQEIKASGILPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQM 652
               E F+++    I P+V+ +  +L   ++   ++DA  LL+E ++   + ++ V+  +
Sbjct: 677 ----EVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEE-LRLFDNKVYGVVHGL 736

Query: 653 IKGDYDDDSNWQMVEYVFDKLNAEGCGLGMRFYNTLLEALWWLGQKGRAARVLTEATKRG 712
           + G    ++ W   + +FDK+N         FYN L + LW  GQK  A  V  E   R 
Sbjct: 737 LMG--QRENVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQKRGAELVALEGRSRQ 796

Query: 713 LFPELFRKSKLVWSVDVHRMWEGGAYTAISLWINKMNEMLMDGEDLPQLAAVVVGGWSEK 772
           ++  ++  S L    D+H M  G A   +  W+  +  ++ +G +LP++ +++  GW + 
Sbjct: 797 VWENVWSDSCL----DLHLMSSGAARAMVHAWLLNIRSIVYEGHELPKVLSILT-GWGKH 856

Query: 773 DSAAQNLPIARAVYSFLQDNVSSSFTFPRWNNGRIVCQQSQLKQLLSEA 815
                +  + RAV   L+  + + F   + N GR     S +   L E+
Sbjct: 857 SKVVGDGALRRAVEVLLR-GMDAPFHLSKCNMGRFTSSGSVVATWLRES 876

BLAST of Lsi02G003410 vs. ExPASy Swiss-Prot
Match: O64624 (Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g18940 PE=2 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 3.2e-79
Identity = 173/635 (27.24%), Postives = 311/635 (48.98%), Query Frame = 0

Query: 86  LINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFKEFAARGDWQRSLRLFKYM---QRQI 145
           L+N +   P  G ++R  D  K+ L   D   + K     G W+R++ LF+++       
Sbjct: 111 LVNSIVEQPLTG-LSRFFDSVKSELLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSG 170

Query: 146 WCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETS 205
             K +  +  I + +LGRE      +++ D++  Q  +  V +YT +++AY R G+YE +
Sbjct: 171 ALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKA 230

Query: 206 LELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLS 265
           ++L ERMK    SP ++TYN +++   +    W  +LG+  EMR +G++ D  T +T+LS
Sbjct: 231 IDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLS 290

Query: 266 ACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLP 325
           ACA  GL  EA+  F  +   G  P   TY+ +++ FGK G   +   +LKEME      
Sbjct: 291 ACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPA 350

Query: 326 DISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELF 385
           D  +YN L+ A+ ++G  KEA  V + M   G +PNA TY+ +++ YGK G+ D+  +LF
Sbjct: 351 DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLF 410

Query: 386 LEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVEEKIDPNMETYEGLVFACGKG 445
             MKE+   P+  TYN ++ + G+     E++ +  D+      PN  T+  ++  CG  
Sbjct: 411 YSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNK 470

Query: 446 GLHEDAKKILLHMNEKGMVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTVDTY 505
           G+ +   ++   M   G  P    ++ LI AYG+     +A   +  M   G  + V TY
Sbjct: 471 GMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTY 530

Query: 506 NSLIHTFARGGLYKEFEAILLRMREYGISRNTKSFSGIIEGYRQSGQFEEAIKAFVEMEK 565
           N+L++  AR G ++  E ++  M+  G      S+S +++ Y + G +    +    +++
Sbjct: 531 NALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKE 590

Query: 566 MRCEPDEQTLEAVLGVYCFAGLVDESKEQFQEIKASGILPSVLCYCMMLAVYAKNGRWDD 625
            +  P    L  +L        +  S+  F   K  G  P ++ +  ML+++ +N  +D 
Sbjct: 591 GQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQ 650

Query: 626 AYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGLGMRFYNTLL 685
           A  +L+ + ++ +S        ++         W+  E +   L        +  YNT++
Sbjct: 651 AEGILESIREDGLSPDLVTYNSLMDMYVRRGECWK-AEEILKTLEKSQLKPDLVSYNTVI 710

Query: 686 EALWWLGQKGRAARVLTEATKRGLFPELFRKSKLV 718
           +     G    A R+L+E T+RG+ P +F  +  V
Sbjct: 711 KGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFV 743

BLAST of Lsi02G003410 vs. ExPASy Swiss-Prot
Match: B8Y6I0 (Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=4577 GN=PPR10 PE=1 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 7.3e-76
Identity = 181/637 (28.41%), Postives = 312/637 (48.98%), Query Frame = 0

Query: 80  SYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFKEFAARGDWQRSLRLFKYMQ 139
           S D + L+  +SS  P  ++A  L   ++ L   D + + K     G W+ +L L ++  
Sbjct: 73  SPDAQVLVLAISS-HPLPTLAAFLASRRDELLRADITSLLKALELSGHWEWALALLRWAG 132

Query: 140 RQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEM-ASQGVIRSVFSYTALINAYGRNGQ 199
           ++     +     +++  LGREG  +    + DE     G    V +YT +++A  R G+
Sbjct: 133 KE--GAADASALEMVVRALGREGQHDAVCALLDETPLPPGSRLDVRAYTTVLHALSRAGR 192

Query: 200 YETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYN 259
           YE +LEL   ++R+ V+P ++TYN V++   R    W  ++ L  EMR  GV+PD  T +
Sbjct: 193 YERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTAS 252

Query: 260 TLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESE 319
           T+++AC   GL DEA   F+ +   G  P + TY+ +++ FGK G   +   +L EME  
Sbjct: 253 TVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQN 312

Query: 320 GYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDV 379
           G  PD  +YN L   +A++G  +EA      M + G +PNA TY+ ++  YG  G+ D+ 
Sbjct: 313 GCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEA 372

Query: 380 RELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVEEKIDPNMETYEGLVFA 439
             LF +MK++   P+  TYN+++ + G+   F  ++ +  ++      PN  T+  ++  
Sbjct: 373 LALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAV 432

Query: 440 CGKGGLHEDAKKILLHMNEKGMVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKST 499
           CGK G+ +   ++L  M   G+  S   Y+ LI AYG+      A   +N M   G    
Sbjct: 433 CGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPC 492

Query: 500 VDTYNSLIHTFARGGLYKEFEAILLRMREYGISRNTKSFSGIIEGYRQSGQFEEAIKAFV 559
           + TYN+L++  +R G +   ++I+ +MR  G   N +S+S +++ Y + G    A  A +
Sbjct: 493 ITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNV--AGIAAI 552

Query: 560 EME---KMRCEPDEQTLEAVLGVYCFAGLVDESKEQFQEIKASGILPSVLCYCMMLAVYA 619
           E E        P    L  ++        +D  +  FQE+KA G  P ++ +  ML++YA
Sbjct: 553 ENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYA 612

Query: 620 KNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGLGM 679
           KNG +  A E+ D + ++ +S        ++        +W+  +     LN   C   M
Sbjct: 613 KNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKI----LNQLKCSQTM 672

Query: 680 R----FYNTLLEALWWLGQKGRAARVLTEATKRGLFP 709
           +     YNT++      G    A RVL+E    G+ P
Sbjct: 673 KPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAP 700

BLAST of Lsi02G003410 vs. ExPASy Swiss-Prot
Match: Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 8.1e-75
Identity = 151/599 (25.21%), Postives = 299/599 (49.92%), Query Frame = 0

Query: 131 SLRLFKYM--QRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTA 190
           +LR F +   Q+      +  +  I+IS+LG+EG +   + +F+ +   G    V+SYT+
Sbjct: 154 ALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTS 213

Query: 191 LINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHE 250
           LI+A+  +G+Y  ++ + ++M+ +   P ++TYN ++N   +    W  +  L  +M+ +
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273

Query: 251 GVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKV 310
           G+ PD  TYNTL++ C    L  EA  VF+ M   G   +  TY+ +++ +GK  + ++ 
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333

Query: 311 AMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNASTYSILLNL 370
             +L EM   G+ P I +YN LI A+A+ G + EAM++  QM   G  P+  TY+ LL+ 
Sbjct: 334 MKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393

Query: 371 YGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVEEKIDPN 430
           + + G+ +    +F EM+ +  +P+  T+N  I+++G  G F E++ +F ++    + P+
Sbjct: 394 FERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD 453

Query: 431 METYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSKAYSGLIEAYGQAALYDEALVAFN 490
           + T+  L+   G+ G+  +   +   M   G VP  + ++ LI AY +   +++A+  + 
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513

Query: 491 TMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILLRMREYGISRNTKSFSGIIEGYRQSG 550
            M + G    + TYN+++   ARGG++++ E +L  M +     N  ++  ++  Y    
Sbjct: 514 RMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGK 573

Query: 551 QFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFQEIKASGILPSVLCYC 610
           +         E+     EP    L+ ++ V     L+ E++  F E+K  G  P +    
Sbjct: 574 EIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLN 633

Query: 611 MMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNA 670
            M+++Y +      A  +LD M K R  +        +   +   +++   E +  ++ A
Sbjct: 634 SMVSIYGRRQMVAKANGVLDYM-KERGFTPSMATYNSLMYMHSRSADFGKSEEILREILA 693

Query: 671 EGCGLGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPELFRKSKLVWSVDVHRMWE 728
           +G    +  YNT++ A     +   A+R+ +E    G+ P++   +  + S     M+E
Sbjct: 694 KGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFE 751

BLAST of Lsi02G003410 vs. ExPASy TrEMBL
Match: A0A1S3AVM1 (pentatricopeptide repeat-containing protein At1g74850, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483154 PE=3 SV=1)

HSP 1 Score: 1661.7 bits (4302), Expect = 0.0e+00
Identity = 826/866 (95.38%), Postives = 842/866 (97.23%), Query Frame = 0

Query: 1   MALSPYLSVPNPFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSLSSDVGKCRA 60
           MALSPY SV NPF+TS+TFQKRYLECQQLPFLSKLSNFSVRRRFFSDDW LSSDVGK RA
Sbjct: 1   MALSPYFSVSNPFRTSSTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWRLSSDVGKARA 60

Query: 61  KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120
           K KDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK
Sbjct: 61  KAKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120

Query: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI 180
           EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTI+ISLLGREGLLEKCSEIFDEMASQGVI
Sbjct: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVI 180

Query: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240
           RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG
Sbjct: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240

Query: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300
           LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG
Sbjct: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300

Query: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS 360
           KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAK GSIKEAMDVFKQMQAAGCVPNAS
Sbjct: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNAS 360

Query: 361 TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420
           TYSILLNLYGKHGRYDDVRELFL+MKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL
Sbjct: 361 TYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420

Query: 421 VEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSKAYSGLIEAYGQAALY 480
           VEE IDPNMETYEGLVFACGKGGLHEDAKKIL HMNEKG+VPSSKAY+GLIEAYGQAALY
Sbjct: 421 VEENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNEKGIVPSSKAYTGLIEAYGQAALY 480

Query: 481 DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILLRMREYGISRNTKSFSGI 540
           DEA+VAFNTMNEVGSKST+DTYNSLIHTFARGGLYKEFEAIL RMREYGISRN KSFSGI
Sbjct: 481 DEAVVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540

Query: 541 IEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFQEIKASGI 600
           IEGYRQSGQ+EEAIKAFVEMEKMRCE DEQTLEAVLGVYCFAGLVDESKEQF EIKASGI
Sbjct: 541 IEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEAVLGVYCFAGLVDESKEQFVEIKASGI 600

Query: 601 LPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE 660
           LPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE
Sbjct: 601 LPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE 660

Query: 661 YVFDKLNAEGCGLGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPELFRKSKLVWSV 720
           YVFDKLNAEGCG GMRFYNTLLEALWWLGQKGRA RVLTEATKRGLFPELFR+SKLVWSV
Sbjct: 661 YVFDKLNAEGCGFGMRFYNTLLEALWWLGQKGRAGRVLTEATKRGLFPELFRQSKLVWSV 720

Query: 721 DVHRMWEGGAYTAISLWINKMNEMLMDGEDLPQLAAVVVGGWSEKDSAAQNLPIARAVYS 780
           DVHRMWEGGAYTAISLW+NKMNEMLMDGED+PQLAAVVVGGW EKDS A+NLPIARAV S
Sbjct: 721 DVHRMWEGGAYTAISLWVNKMNEMLMDGEDIPQLAAVVVGGWLEKDSTARNLPIARAVNS 780

Query: 781 FLQDNVSSSFTFPRWNNGRIVCQQSQLKQLLSEAEASSSEIITLNNSPLKLPEAKISRSG 840
           FLQDNVSSSF+FP WNNGRIVCQQSQLKQLL+   ASSSEII LNNSPL LPEAKISRSG
Sbjct: 781 FLQDNVSSSFSFPGWNNGRIVCQQSQLKQLLT---ASSSEIIALNNSPLNLPEAKISRSG 840

Query: 841 INNDKYNDVDSKSSNRTGTELLTTTV 867
           INNDKY D+DSKSSNRTGTELLTTTV
Sbjct: 841 INNDKYKDIDSKSSNRTGTELLTTTV 863

BLAST of Lsi02G003410 vs. ExPASy TrEMBL
Match: A0A5D3BJ34 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003320 PE=3 SV=1)

HSP 1 Score: 1659.8 bits (4297), Expect = 0.0e+00
Identity = 825/865 (95.38%), Postives = 841/865 (97.23%), Query Frame = 0

Query: 1   MALSPYLSVPNPFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSLSSDVGKCRA 60
           MALSPY SV NPF+TS+TFQKRYLECQQLPFLSKLSNFSVRRRFFSDDW LSSDVGK RA
Sbjct: 1   MALSPYFSVSNPFRTSSTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWRLSSDVGKARA 60

Query: 61  KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120
           K KDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK
Sbjct: 61  KAKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120

Query: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI 180
           EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTI+ISLLGREGLLEKCSEIFDEMASQGVI
Sbjct: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVI 180

Query: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240
           RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG
Sbjct: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240

Query: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300
           LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG
Sbjct: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300

Query: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS 360
           KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAK GSIKEAMDVFKQMQAAGCVPNAS
Sbjct: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNAS 360

Query: 361 TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420
           TYSILLNLYGKHGRYDDVRELFL+MKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL
Sbjct: 361 TYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420

Query: 421 VEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSKAYSGLIEAYGQAALY 480
           VEE IDPNMETYEGLVFACGKGGLHEDAKKIL HMNEKG+VPSSKAY+GLIEAYGQAALY
Sbjct: 421 VEENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNEKGIVPSSKAYTGLIEAYGQAALY 480

Query: 481 DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILLRMREYGISRNTKSFSGI 540
           DEA+VAFNTMNEVGSKST+DTYNSLIHTFARGGLYKEFEAIL RMREYGISRN KSFSGI
Sbjct: 481 DEAVVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540

Query: 541 IEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFQEIKASGI 600
           IEGYRQSGQ+EEAIKAFVEMEKMRCE DEQTLEAVLGVYCFAGLVDESKEQF EIKASGI
Sbjct: 541 IEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEAVLGVYCFAGLVDESKEQFVEIKASGI 600

Query: 601 LPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE 660
           LPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE
Sbjct: 601 LPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE 660

Query: 661 YVFDKLNAEGCGLGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPELFRKSKLVWSV 720
           YVFDKLNAEGCG GMRFYNTLLEALWWLGQKGRA RVLTEATKRGLFPELFR+SKLVWSV
Sbjct: 661 YVFDKLNAEGCGFGMRFYNTLLEALWWLGQKGRAGRVLTEATKRGLFPELFRQSKLVWSV 720

Query: 721 DVHRMWEGGAYTAISLWINKMNEMLMDGEDLPQLAAVVVGGWSEKDSAAQNLPIARAVYS 780
           DVHRMWEGGAYTAISLW+NKMNEMLMDGED+PQLAAVVVGGW EKDS A+NLPIARAV S
Sbjct: 721 DVHRMWEGGAYTAISLWVNKMNEMLMDGEDIPQLAAVVVGGWLEKDSTARNLPIARAVNS 780

Query: 781 FLQDNVSSSFTFPRWNNGRIVCQQSQLKQLLSEAEASSSEIITLNNSPLKLPEAKISRSG 840
           FLQDNVSSSF+FP WNNGRIVCQQSQLKQLL+   ASSSEII LNNSPL LPEAKISRSG
Sbjct: 781 FLQDNVSSSFSFPGWNNGRIVCQQSQLKQLLT---ASSSEIIALNNSPLNLPEAKISRSG 840

Query: 841 INNDKYNDVDSKSSNRTGTELLTTT 866
           INNDKY D+DSKSSNRTGTELLTTT
Sbjct: 841 INNDKYKDIDSKSSNRTGTELLTTT 862

BLAST of Lsi02G003410 vs. ExPASy TrEMBL
Match: A0A5A7UKU1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G00380 PE=4 SV=1)

HSP 1 Score: 1658.3 bits (4293), Expect = 0.0e+00
Identity = 825/865 (95.38%), Postives = 840/865 (97.11%), Query Frame = 0

Query: 1   MALSPYLSVPNPFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSLSSDVGKCRA 60
           MALSPY SV NPF+TS+TFQKRYLECQQLPFLSKLSNFSVRRRFFSDDW LSSDVGK RA
Sbjct: 1   MALSPYFSVSNPFRTSSTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWRLSSDVGKARA 60

Query: 61  KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120
           K KDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK
Sbjct: 61  KAKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120

Query: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI 180
           EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTI+ISLLGREGLLEKCSEIFDEMASQGVI
Sbjct: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVI 180

Query: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240
           RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG
Sbjct: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240

Query: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300
           LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG
Sbjct: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300

Query: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS 360
           KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAK GSIKEAMDVFKQMQAAGCVPNAS
Sbjct: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNAS 360

Query: 361 TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420
           TYSILLNLYGKHGRYDDVRELFL+MKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL
Sbjct: 361 TYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420

Query: 421 VEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSKAYSGLIEAYGQAALY 480
           VEE IDPNMETYEGLVFACGKGGLHEDAKKIL HMNEKG+VPSSKAY+GLIEAYGQAALY
Sbjct: 421 VEENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNEKGIVPSSKAYTGLIEAYGQAALY 480

Query: 481 DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILLRMREYGISRNTKSFSGI 540
           DEA+VAFNTMNEVGSKST+DTYNSLIHTFARGGLYKEFEAIL RMREYGISRN KSFSGI
Sbjct: 481 DEAVVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540

Query: 541 IEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFQEIKASGI 600
           IEGYRQSGQ+EEAIKAFVEMEKMRCE DEQTLEAVLGVYCFAGLVDESKEQF EIKASGI
Sbjct: 541 IEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEAVLGVYCFAGLVDESKEQFVEIKASGI 600

Query: 601 LPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE 660
           LPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE
Sbjct: 601 LPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE 660

Query: 661 YVFDKLNAEGCGLGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPELFRKSKLVWSV 720
           YVFDKLNAEGCG GMRFYNTLLEALWWLGQKGRA RVLTEATKRGLFPELFR+SKLVWSV
Sbjct: 661 YVFDKLNAEGCGFGMRFYNTLLEALWWLGQKGRAGRVLTEATKRGLFPELFRQSKLVWSV 720

Query: 721 DVHRMWEGGAYTAISLWINKMNEMLMDGEDLPQLAAVVVGGWSEKDSAAQNLPIARAVYS 780
           DVHRMWEGGAYTAISLW+NKMNEMLMDGEDLPQLAAVVVGGW EKDS A+NLPIA AV S
Sbjct: 721 DVHRMWEGGAYTAISLWVNKMNEMLMDGEDLPQLAAVVVGGWLEKDSTARNLPIAMAVNS 780

Query: 781 FLQDNVSSSFTFPRWNNGRIVCQQSQLKQLLSEAEASSSEIITLNNSPLKLPEAKISRSG 840
           FLQDNVSSSF+FP WNNGRIVCQQSQLKQLL+   ASSSEII LNNSPL LPEAKISRSG
Sbjct: 781 FLQDNVSSSFSFPGWNNGRIVCQQSQLKQLLT---ASSSEIIALNNSPLNLPEAKISRSG 840

Query: 841 INNDKYNDVDSKSSNRTGTELLTTT 866
           INNDKY D+DSKSSNRTGTELLTTT
Sbjct: 841 INNDKYKDIDSKSSNRTGTELLTTT 862

BLAST of Lsi02G003410 vs. ExPASy TrEMBL
Match: A0A1S3AUM4 (pentatricopeptide repeat-containing protein At1g74850, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483154 PE=3 SV=1)

HSP 1 Score: 1657.1 bits (4290), Expect = 0.0e+00
Identity = 826/867 (95.27%), Postives = 842/867 (97.12%), Query Frame = 0

Query: 1   MALSPYLSVPNPFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSLSSDVGKCRA 60
           MALSPY SV NPF+TS+TFQKRYLECQQLPFLSKLSNFSVRRRFFSDDW LSSDVGK RA
Sbjct: 1   MALSPYFSVSNPFRTSSTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWRLSSDVGKARA 60

Query: 61  KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120
           K KDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK
Sbjct: 61  KAKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120

Query: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI 180
           EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTI+ISLLGREGLLEKCSEIFDEMASQGVI
Sbjct: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVI 180

Query: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240
           RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG
Sbjct: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240

Query: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300
           LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG
Sbjct: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300

Query: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS 360
           KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAK GSIKEAMDVFKQMQAAGCVPNAS
Sbjct: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNAS 360

Query: 361 TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420
           TYSILLNLYGKHGRYDDVRELFL+MKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL
Sbjct: 361 TYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420

Query: 421 VEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSKAYSGLIEAYGQAALY 480
           VEE IDPNMETYEGLVFACGKGGLHEDAKKIL HMNEKG+VPSSKAY+GLIEAYGQAALY
Sbjct: 421 VEENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNEKGIVPSSKAYTGLIEAYGQAALY 480

Query: 481 DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILLRMREYGISRNTKSFSGI 540
           DEA+VAFNTMNEVGSKST+DTYNSLIHTFARGGLYKEFEAIL RMREYGISRN KSFSGI
Sbjct: 481 DEAVVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540

Query: 541 IEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFQEIKASGI 600
           IEGYRQSGQ+EEAIKAFVEMEKMRCE DEQTLEAVLGVYCFAGLVDESKEQF EIKASGI
Sbjct: 541 IEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEAVLGVYCFAGLVDESKEQFVEIKASGI 600

Query: 601 LPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE 660
           LPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE
Sbjct: 601 LPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE 660

Query: 661 YVFDKLNAEGCGLGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPELFRKSKLVWSV 720
           YVFDKLNAEGCG GMRFYNTLLEALWWLGQKGRA RVLTEATKRGLFPELFR+SKLVWSV
Sbjct: 661 YVFDKLNAEGCGFGMRFYNTLLEALWWLGQKGRAGRVLTEATKRGLFPELFRQSKLVWSV 720

Query: 721 DVHRMWEGGAYTAISLWINKMNEMLMDGEDLPQLAAVVVG-GWSEKDSAAQNLPIARAVY 780
           DVHRMWEGGAYTAISLW+NKMNEMLMDGED+PQLAAVVVG GW EKDS A+NLPIARAV 
Sbjct: 721 DVHRMWEGGAYTAISLWVNKMNEMLMDGEDIPQLAAVVVGRGWLEKDSTARNLPIARAVN 780

Query: 781 SFLQDNVSSSFTFPRWNNGRIVCQQSQLKQLLSEAEASSSEIITLNNSPLKLPEAKISRS 840
           SFLQDNVSSSF+FP WNNGRIVCQQSQLKQLL+   ASSSEII LNNSPL LPEAKISRS
Sbjct: 781 SFLQDNVSSSFSFPGWNNGRIVCQQSQLKQLLT---ASSSEIIALNNSPLNLPEAKISRS 840

Query: 841 GINNDKYNDVDSKSSNRTGTELLTTTV 867
           GINNDKY D+DSKSSNRTGTELLTTTV
Sbjct: 841 GINNDKYKDIDSKSSNRTGTELLTTTV 864

BLAST of Lsi02G003410 vs. ExPASy TrEMBL
Match: A0A0A0LW62 (Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045740 PE=3 SV=1)

HSP 1 Score: 1647.1 bits (4264), Expect = 0.0e+00
Identity = 821/866 (94.80%), Postives = 836/866 (96.54%), Query Frame = 0

Query: 1   MALSPYLSVPNPFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSLSSDVGKCRA 60
           MALSPY SVPNP +T +TFQKRYLECQQLPFLSKLSNFSVRRRFFSDDW LSSDVGK RA
Sbjct: 1   MALSPYFSVPNPLRTPSTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWRLSSDVGKVRA 60

Query: 61  KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120
           K KDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK
Sbjct: 61  KAKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120

Query: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI 180
           EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTI+ISLLGREGLLEKCSEIFDEMASQGVI
Sbjct: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVI 180

Query: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240
           RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG
Sbjct: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240

Query: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300
           LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG
Sbjct: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300

Query: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS 360
           KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAK GSIKEAMDVFKQMQAAGCVPNAS
Sbjct: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNAS 360

Query: 361 TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420
           TYSILLNLYGKHGRYDDVRELFL+MKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL
Sbjct: 361 TYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420

Query: 421 VEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSKAYSGLIEAYGQAALY 480
           V+E IDPNMETYEGLVFACGKGGLHEDAKKIL HMN KG+VPSSKAYSGLIEAYGQAALY
Sbjct: 421 VDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALY 480

Query: 481 DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILLRMREYGISRNTKSFSGI 540
           DEALVAFNTMNEVGSKST+DTYNSLIHTFARGGLYKEFEAIL RMREYGISRN KSFSGI
Sbjct: 481 DEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540

Query: 541 IEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFQEIKASGI 600
           IEGYRQSGQ+EEAIKAFVEMEKMRCE DEQTLE VLGVYCFAGLVDESKEQF EIKASGI
Sbjct: 541 IEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGI 600

Query: 601 LPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE 660
           LPSVLCYCMMLAVYAKNGRWDDA ELLDEMIK RVSSIHQVIGQMIKGDYDDDSNWQMVE
Sbjct: 601 LPSVLCYCMMLAVYAKNGRWDDASELLDEMIKTRVSSIHQVIGQMIKGDYDDDSNWQMVE 660

Query: 661 YVFDKLNAEGCGLGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPELFRKSKLVWSV 720
           YVFDKLNAEGCG GMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPELFR+SKLVWSV
Sbjct: 661 YVFDKLNAEGCGFGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPELFRQSKLVWSV 720

Query: 721 DVHRMWEGGAYTAISLWINKMNEMLMDGEDLPQLAAVVVGGWSEKDSAAQNLPIARAVYS 780
           DVHRMWEGGAYTA+SLW+NKMNEMLMDGEDLPQLAAVVVGG  EKDS A+NLPIARAVYS
Sbjct: 721 DVHRMWEGGAYTAVSLWVNKMNEMLMDGEDLPQLAAVVVGGSLEKDSTARNLPIARAVYS 780

Query: 781 FLQDNVSSSFTFPRWNNGRIVCQQSQLKQLLSEAEASSSEIITLNNSPLKLPEAKISRSG 840
           FLQDNVSSSF+FP WNN RI+CQQSQLKQLL+   ASSSEII LNNSP  LPEAKISRSG
Sbjct: 781 FLQDNVSSSFSFPGWNNSRIICQQSQLKQLLT---ASSSEIIALNNSPFNLPEAKISRSG 840

Query: 841 INNDKYNDVDSKSSNRTGTELLTTTV 867
           INNDKY DVDSKSSNRTGTELLTTTV
Sbjct: 841 INNDKYKDVDSKSSNRTGTELLTTTV 863

BLAST of Lsi02G003410 vs. NCBI nr
Match: XP_038894204.1 (pentatricopeptide repeat-containing protein At1g74850, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 1701.0 bits (4404), Expect = 0.0e+00
Identity = 844/866 (97.46%), Postives = 853/866 (98.50%), Query Frame = 0

Query: 1   MALSPYLSVPNPFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSLSSDVGKCRA 60
           MALSPYLSVPNPFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSLSSDV KCRA
Sbjct: 1   MALSPYLSVPNPFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSLSSDVAKCRA 60

Query: 61  KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120
           KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK
Sbjct: 61  KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120

Query: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI 180
           EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI
Sbjct: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI 180

Query: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240
           RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG
Sbjct: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240

Query: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300
           LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTM+EGGIVPEITTYSYIVETFG
Sbjct: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMVEGGIVPEITTYSYIVETFG 300

Query: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS 360
           KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS
Sbjct: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS 360

Query: 361 TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420
           TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL
Sbjct: 361 TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420

Query: 421 VEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSKAYSGLIEAYGQAALY 480
           VEEKIDPNMETYEGLV+ACGKGGLHEDAKKI+ HMNEKGMVPSSKAYSGLIEAYGQAALY
Sbjct: 421 VEEKIDPNMETYEGLVYACGKGGLHEDAKKIIRHMNEKGMVPSSKAYSGLIEAYGQAALY 480

Query: 481 DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILLRMREYGISRNTKSFSGI 540
           DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILLRMRE+GISRN KSFSGI
Sbjct: 481 DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILLRMREHGISRNAKSFSGI 540

Query: 541 IEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFQEIKASGI 600
           IEGYRQSGQFEEAIKAFVEMEKMR EPDEQTLEAVLGVYCFAGLVDESKEQF EIKASGI
Sbjct: 541 IEGYRQSGQFEEAIKAFVEMEKMRFEPDEQTLEAVLGVYCFAGLVDESKEQFHEIKASGI 600

Query: 601 LPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE 660
           LP+VLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE
Sbjct: 601 LPNVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE 660

Query: 661 YVFDKLNAEGCGLGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPELFRKSKLVWSV 720
           YVFDKLNAEGCGLGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPELFRK KLVWSV
Sbjct: 661 YVFDKLNAEGCGLGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPELFRKRKLVWSV 720

Query: 721 DVHRMWEGGAYTAISLWINKMNEMLMDGEDLPQLAAVVVGGWSEKDSAAQNLPIARAVYS 780
           DVHRMWEG AYTA+SLW+NKMNEMLMDGEDLPQLAAVVVGGW EKDS AQNLPIARAVYS
Sbjct: 721 DVHRMWEGSAYTALSLWVNKMNEMLMDGEDLPQLAAVVVGGWLEKDSTAQNLPIARAVYS 780

Query: 781 FLQDNVSSSFTFPRWNNGRIVCQQSQLKQLLSEAEASSSEIITLNNSPLKLPEAKISRSG 840
           FLQDNVSSSF+FP WNNGRIVCQQSQLKQLLS AEASSSEIITLNNSPL LPEAKISRSG
Sbjct: 781 FLQDNVSSSFSFPGWNNGRIVCQQSQLKQLLSNAEASSSEIITLNNSPLNLPEAKISRSG 840

Query: 841 INNDKYNDVDSKSSNRTGTELLTTTV 867
           INNDKY DVDSKSSNRTGTELLTTT+
Sbjct: 841 INNDKYKDVDSKSSNRTGTELLTTTI 866

BLAST of Lsi02G003410 vs. NCBI nr
Match: XP_038894203.1 (pentatricopeptide repeat-containing protein At1g74850, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 1696.4 bits (4392), Expect = 0.0e+00
Identity = 844/867 (97.35%), Postives = 853/867 (98.39%), Query Frame = 0

Query: 1   MALSPYLSVPNPFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSLSSDVGKCRA 60
           MALSPYLSVPNPFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSLSSDV KCRA
Sbjct: 1   MALSPYLSVPNPFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSLSSDVAKCRA 60

Query: 61  KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120
           KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK
Sbjct: 61  KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120

Query: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI 180
           EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI
Sbjct: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI 180

Query: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240
           RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG
Sbjct: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240

Query: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300
           LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTM+EGGIVPEITTYSYIVETFG
Sbjct: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMVEGGIVPEITTYSYIVETFG 300

Query: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS 360
           KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS
Sbjct: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS 360

Query: 361 TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420
           TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL
Sbjct: 361 TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420

Query: 421 VEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSKAYSGLIEAYGQAALY 480
           VEEKIDPNMETYEGLV+ACGKGGLHEDAKKI+ HMNEKGMVPSSKAYSGLIEAYGQAALY
Sbjct: 421 VEEKIDPNMETYEGLVYACGKGGLHEDAKKIIRHMNEKGMVPSSKAYSGLIEAYGQAALY 480

Query: 481 DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILLRMREYGISRNTKSFSGI 540
           DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILLRMRE+GISRN KSFSGI
Sbjct: 481 DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILLRMREHGISRNAKSFSGI 540

Query: 541 IEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFQEIKASGI 600
           IEGYRQSGQFEEAIKAFVEMEKMR EPDEQTLEAVLGVYCFAGLVDESKEQF EIKASGI
Sbjct: 541 IEGYRQSGQFEEAIKAFVEMEKMRFEPDEQTLEAVLGVYCFAGLVDESKEQFHEIKASGI 600

Query: 601 LPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE 660
           LP+VLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE
Sbjct: 601 LPNVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE 660

Query: 661 YVFDKLNAEGCGLGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPELFRKSKLVWSV 720
           YVFDKLNAEGCGLGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPELFRK KLVWSV
Sbjct: 661 YVFDKLNAEGCGLGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPELFRKRKLVWSV 720

Query: 721 DVHRMWEGGAYTAISLWINKMNEMLMDGEDLPQLAAVVVG-GWSEKDSAAQNLPIARAVY 780
           DVHRMWEG AYTA+SLW+NKMNEMLMDGEDLPQLAAVVVG GW EKDS AQNLPIARAVY
Sbjct: 721 DVHRMWEGSAYTALSLWVNKMNEMLMDGEDLPQLAAVVVGRGWLEKDSTAQNLPIARAVY 780

Query: 781 SFLQDNVSSSFTFPRWNNGRIVCQQSQLKQLLSEAEASSSEIITLNNSPLKLPEAKISRS 840
           SFLQDNVSSSF+FP WNNGRIVCQQSQLKQLLS AEASSSEIITLNNSPL LPEAKISRS
Sbjct: 781 SFLQDNVSSSFSFPGWNNGRIVCQQSQLKQLLSNAEASSSEIITLNNSPLNLPEAKISRS 840

Query: 841 GINNDKYNDVDSKSSNRTGTELLTTTV 867
           GINNDKY DVDSKSSNRTGTELLTTT+
Sbjct: 841 GINNDKYKDVDSKSSNRTGTELLTTTI 867

BLAST of Lsi02G003410 vs. NCBI nr
Match: XP_008437858.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g74850, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 1661.7 bits (4302), Expect = 0.0e+00
Identity = 826/866 (95.38%), Postives = 842/866 (97.23%), Query Frame = 0

Query: 1   MALSPYLSVPNPFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSLSSDVGKCRA 60
           MALSPY SV NPF+TS+TFQKRYLECQQLPFLSKLSNFSVRRRFFSDDW LSSDVGK RA
Sbjct: 1   MALSPYFSVSNPFRTSSTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWRLSSDVGKARA 60

Query: 61  KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120
           K KDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK
Sbjct: 61  KAKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120

Query: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI 180
           EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTI+ISLLGREGLLEKCSEIFDEMASQGVI
Sbjct: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVI 180

Query: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240
           RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG
Sbjct: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240

Query: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300
           LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG
Sbjct: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300

Query: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS 360
           KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAK GSIKEAMDVFKQMQAAGCVPNAS
Sbjct: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNAS 360

Query: 361 TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420
           TYSILLNLYGKHGRYDDVRELFL+MKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL
Sbjct: 361 TYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420

Query: 421 VEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSKAYSGLIEAYGQAALY 480
           VEE IDPNMETYEGLVFACGKGGLHEDAKKIL HMNEKG+VPSSKAY+GLIEAYGQAALY
Sbjct: 421 VEENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNEKGIVPSSKAYTGLIEAYGQAALY 480

Query: 481 DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILLRMREYGISRNTKSFSGI 540
           DEA+VAFNTMNEVGSKST+DTYNSLIHTFARGGLYKEFEAIL RMREYGISRN KSFSGI
Sbjct: 481 DEAVVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540

Query: 541 IEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFQEIKASGI 600
           IEGYRQSGQ+EEAIKAFVEMEKMRCE DEQTLEAVLGVYCFAGLVDESKEQF EIKASGI
Sbjct: 541 IEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEAVLGVYCFAGLVDESKEQFVEIKASGI 600

Query: 601 LPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE 660
           LPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE
Sbjct: 601 LPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE 660

Query: 661 YVFDKLNAEGCGLGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPELFRKSKLVWSV 720
           YVFDKLNAEGCG GMRFYNTLLEALWWLGQKGRA RVLTEATKRGLFPELFR+SKLVWSV
Sbjct: 661 YVFDKLNAEGCGFGMRFYNTLLEALWWLGQKGRAGRVLTEATKRGLFPELFRQSKLVWSV 720

Query: 721 DVHRMWEGGAYTAISLWINKMNEMLMDGEDLPQLAAVVVGGWSEKDSAAQNLPIARAVYS 780
           DVHRMWEGGAYTAISLW+NKMNEMLMDGED+PQLAAVVVGGW EKDS A+NLPIARAV S
Sbjct: 721 DVHRMWEGGAYTAISLWVNKMNEMLMDGEDIPQLAAVVVGGWLEKDSTARNLPIARAVNS 780

Query: 781 FLQDNVSSSFTFPRWNNGRIVCQQSQLKQLLSEAEASSSEIITLNNSPLKLPEAKISRSG 840
           FLQDNVSSSF+FP WNNGRIVCQQSQLKQLL+   ASSSEII LNNSPL LPEAKISRSG
Sbjct: 781 FLQDNVSSSFSFPGWNNGRIVCQQSQLKQLLT---ASSSEIIALNNSPLNLPEAKISRSG 840

Query: 841 INNDKYNDVDSKSSNRTGTELLTTTV 867
           INNDKY D+DSKSSNRTGTELLTTTV
Sbjct: 841 INNDKYKDIDSKSSNRTGTELLTTTV 863

BLAST of Lsi02G003410 vs. NCBI nr
Match: TYJ99127.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1659.8 bits (4297), Expect = 0.0e+00
Identity = 825/865 (95.38%), Postives = 841/865 (97.23%), Query Frame = 0

Query: 1   MALSPYLSVPNPFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSLSSDVGKCRA 60
           MALSPY SV NPF+TS+TFQKRYLECQQLPFLSKLSNFSVRRRFFSDDW LSSDVGK RA
Sbjct: 1   MALSPYFSVSNPFRTSSTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWRLSSDVGKARA 60

Query: 61  KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120
           K KDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK
Sbjct: 61  KAKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120

Query: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI 180
           EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTI+ISLLGREGLLEKCSEIFDEMASQGVI
Sbjct: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVI 180

Query: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240
           RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG
Sbjct: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240

Query: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300
           LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG
Sbjct: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300

Query: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS 360
           KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAK GSIKEAMDVFKQMQAAGCVPNAS
Sbjct: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNAS 360

Query: 361 TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420
           TYSILLNLYGKHGRYDDVRELFL+MKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL
Sbjct: 361 TYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420

Query: 421 VEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSKAYSGLIEAYGQAALY 480
           VEE IDPNMETYEGLVFACGKGGLHEDAKKIL HMNEKG+VPSSKAY+GLIEAYGQAALY
Sbjct: 421 VEENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNEKGIVPSSKAYTGLIEAYGQAALY 480

Query: 481 DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILLRMREYGISRNTKSFSGI 540
           DEA+VAFNTMNEVGSKST+DTYNSLIHTFARGGLYKEFEAIL RMREYGISRN KSFSGI
Sbjct: 481 DEAVVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540

Query: 541 IEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFQEIKASGI 600
           IEGYRQSGQ+EEAIKAFVEMEKMRCE DEQTLEAVLGVYCFAGLVDESKEQF EIKASGI
Sbjct: 541 IEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEAVLGVYCFAGLVDESKEQFVEIKASGI 600

Query: 601 LPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE 660
           LPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE
Sbjct: 601 LPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE 660

Query: 661 YVFDKLNAEGCGLGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPELFRKSKLVWSV 720
           YVFDKLNAEGCG GMRFYNTLLEALWWLGQKGRA RVLTEATKRGLFPELFR+SKLVWSV
Sbjct: 661 YVFDKLNAEGCGFGMRFYNTLLEALWWLGQKGRAGRVLTEATKRGLFPELFRQSKLVWSV 720

Query: 721 DVHRMWEGGAYTAISLWINKMNEMLMDGEDLPQLAAVVVGGWSEKDSAAQNLPIARAVYS 780
           DVHRMWEGGAYTAISLW+NKMNEMLMDGED+PQLAAVVVGGW EKDS A+NLPIARAV S
Sbjct: 721 DVHRMWEGGAYTAISLWVNKMNEMLMDGEDIPQLAAVVVGGWLEKDSTARNLPIARAVNS 780

Query: 781 FLQDNVSSSFTFPRWNNGRIVCQQSQLKQLLSEAEASSSEIITLNNSPLKLPEAKISRSG 840
           FLQDNVSSSF+FP WNNGRIVCQQSQLKQLL+   ASSSEII LNNSPL LPEAKISRSG
Sbjct: 781 FLQDNVSSSFSFPGWNNGRIVCQQSQLKQLLT---ASSSEIIALNNSPLNLPEAKISRSG 840

Query: 841 INNDKYNDVDSKSSNRTGTELLTTT 866
           INNDKY D+DSKSSNRTGTELLTTT
Sbjct: 841 INNDKYKDIDSKSSNRTGTELLTTT 862

BLAST of Lsi02G003410 vs. NCBI nr
Match: KAA0055197.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1658.3 bits (4293), Expect = 0.0e+00
Identity = 825/865 (95.38%), Postives = 840/865 (97.11%), Query Frame = 0

Query: 1   MALSPYLSVPNPFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSLSSDVGKCRA 60
           MALSPY SV NPF+TS+TFQKRYLECQQLPFLSKLSNFSVRRRFFSDDW LSSDVGK RA
Sbjct: 1   MALSPYFSVSNPFRTSSTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWRLSSDVGKARA 60

Query: 61  KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120
           K KDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK
Sbjct: 61  KAKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120

Query: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI 180
           EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTI+ISLLGREGLLEKCSEIFDEMASQGVI
Sbjct: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVI 180

Query: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240
           RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG
Sbjct: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240

Query: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300
           LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG
Sbjct: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300

Query: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS 360
           KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAK GSIKEAMDVFKQMQAAGCVPNAS
Sbjct: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNAS 360

Query: 361 TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420
           TYSILLNLYGKHGRYDDVRELFL+MKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL
Sbjct: 361 TYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420

Query: 421 VEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSKAYSGLIEAYGQAALY 480
           VEE IDPNMETYEGLVFACGKGGLHEDAKKIL HMNEKG+VPSSKAY+GLIEAYGQAALY
Sbjct: 421 VEENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNEKGIVPSSKAYTGLIEAYGQAALY 480

Query: 481 DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILLRMREYGISRNTKSFSGI 540
           DEA+VAFNTMNEVGSKST+DTYNSLIHTFARGGLYKEFEAIL RMREYGISRN KSFSGI
Sbjct: 481 DEAVVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540

Query: 541 IEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFQEIKASGI 600
           IEGYRQSGQ+EEAIKAFVEMEKMRCE DEQTLEAVLGVYCFAGLVDESKEQF EIKASGI
Sbjct: 541 IEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEAVLGVYCFAGLVDESKEQFVEIKASGI 600

Query: 601 LPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE 660
           LPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE
Sbjct: 601 LPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVE 660

Query: 661 YVFDKLNAEGCGLGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPELFRKSKLVWSV 720
           YVFDKLNAEGCG GMRFYNTLLEALWWLGQKGRA RVLTEATKRGLFPELFR+SKLVWSV
Sbjct: 661 YVFDKLNAEGCGFGMRFYNTLLEALWWLGQKGRAGRVLTEATKRGLFPELFRQSKLVWSV 720

Query: 721 DVHRMWEGGAYTAISLWINKMNEMLMDGEDLPQLAAVVVGGWSEKDSAAQNLPIARAVYS 780
           DVHRMWEGGAYTAISLW+NKMNEMLMDGEDLPQLAAVVVGGW EKDS A+NLPIA AV S
Sbjct: 721 DVHRMWEGGAYTAISLWVNKMNEMLMDGEDLPQLAAVVVGGWLEKDSTARNLPIAMAVNS 780

Query: 781 FLQDNVSSSFTFPRWNNGRIVCQQSQLKQLLSEAEASSSEIITLNNSPLKLPEAKISRSG 840
           FLQDNVSSSF+FP WNNGRIVCQQSQLKQLL+   ASSSEII LNNSPL LPEAKISRSG
Sbjct: 781 FLQDNVSSSFSFPGWNNGRIVCQQSQLKQLLT---ASSSEIIALNNSPLNLPEAKISRSG 840

Query: 841 INNDKYNDVDSKSSNRTGTELLTTT 866
           INNDKY D+DSKSSNRTGTELLTTT
Sbjct: 841 INNDKYKDIDSKSSNRTGTELLTTT 862

BLAST of Lsi02G003410 vs. TAIR 10
Match: AT1G74850.1 (plastid transcriptionally active 2 )

HSP 1 Score: 1232.2 bits (3187), Expect = 0.0e+00
Identity = 619/874 (70.82%), Postives = 720/874 (82.38%), Query Frame = 0

Query: 7   LSVPNPFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRF---------FSDDWSLSSDVGK 66
           L++PNP                L FL + S+F   RRF            +    S  GK
Sbjct: 3   LAIPNP------------NSHHLSFLIQNSSFIGNRRFADGNRLRFLSGGNRKPCSFSGK 62

Query: 67  CRAKPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSL 126
            +AK KDLVLGNPSV VEKGKYSYDVE+LINKLSSLPPRGSIARCLDIFKN+LSLNDF+L
Sbjct: 63  IKAKTKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFAL 122

Query: 127 VFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQ 186
           VFKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLL+KC E+FDEM SQ
Sbjct: 123 VFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQ 182

Query: 187 GVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEG 246
           GV RSVFSYTALINAYGRNG+YETSLELL+RMK E++SP+ILTYNTVINACARG LDWEG
Sbjct: 183 GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEG 242

Query: 247 LLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVE 306
           LLGLFAEMRHEG+QPD+VTYNTLLSACA RGLGDEAEMVF+TM +GGIVP++TTYS++VE
Sbjct: 243 LLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVE 302

Query: 307 TFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVP 366
           TFGKL +LEKV  LL EM S G LPDI+SYNVL+EA+AKSGSIKEAM VF QMQAAGC P
Sbjct: 303 TFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTP 362

Query: 367 NASTYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLF 426
           NA+TYS+LLNL+G+ GRYDDVR+LFLEMK S+ +PDA TYNILI VFGEGGYFKEVVTLF
Sbjct: 363 NANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLF 422

Query: 427 HDLVEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSKAYSGLIEAYGQA 486
           HD+VEE I+P+METYEG++FACGKGGLHEDA+KIL +M    +VPSSKAY+G+IEA+GQA
Sbjct: 423 HDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQA 482

Query: 487 ALYDEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILLRMREYGISRNTKSF 546
           ALY+EALVAFNTM+EVGS  +++T++SL+++FARGGL KE EAIL R+ + GI RN  +F
Sbjct: 483 ALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTF 542

Query: 547 SGIIEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFQEIKA 606
           +  IE Y+Q G+FEEA+K +V+MEK RC+PDE+TLEAVL VY FA LVDE +EQF+E+KA
Sbjct: 543 NAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKA 602

Query: 607 SGILPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQ 666
           S ILPS++CYCMMLAVY K  RWDD  ELL+EM+ NRVS+IHQVIGQMIKGDYDDDSNWQ
Sbjct: 603 SDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQ 662

Query: 667 MVEYVFDKLNAEGCGLGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPELFRKSKLV 726
           +VEYV DKLN+EGCGLG+RFYN LL+ALWWLGQK RAARVL EATKRGLFPELFRK+KLV
Sbjct: 663 IVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKLV 722

Query: 727 WSVDVHRMWEGGAYTAISLWINKMNEMLMDGEDLPQLAAVV-VGGWSEKDSAAQNLPIAR 786
           WSVDVHRM EGG YTA+S+W+N +N+ML+ G DLPQLA VV V G  EK SAA+  PIA+
Sbjct: 723 WSVDVHRMSEGGMYTALSVWLNDINDMLLKG-DLPQLAVVVSVRGQLEKSSAARESPIAK 782

Query: 787 AVYSFLQDNVSSSFTFPRWNNGRIVCQQSQLKQLLSEAEASSSE-----IITLNNSPLKL 846
           A +SFLQD+VSSSF+F  WN GRI+CQ+SQLKQLLS  E +S E     ++ L NSP+  
Sbjct: 783 AAFSFLQDHVSSSFSFTGWNGGRIMCQRSQLKQLLSTKEPTSEESENKNLVALANSPIFA 842

Query: 847 PEAKISRSGINNDKYNDVDSKSSNRTGTELLTTT 866
              + S S   N   N    ++  RT  EL  +T
Sbjct: 843 AGTRASTSSDTNHSGNPTQRRT--RTKKELAGST 861

BLAST of Lsi02G003410 vs. TAIR 10
Match: AT2G31400.1 (genomes uncoupled 1 )

HSP 1 Score: 303.1 bits (775), Expect = 7.0e-82
Identity = 190/709 (26.80%), Postives = 351/709 (49.51%), Query Frame = 0

Query: 113 NDFSLVFKEFAARGDWQRSLRLFKY-MQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIF 172
           +D + + +E   R +  +++  +++ ++R+        + + MIS LGR G +     IF
Sbjct: 197 DDCTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIF 256

Query: 173 DEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARG 232
           +   + G   +V++++ALI+AYGR+G +E ++ +   MK   + PN++TYN VI+AC +G
Sbjct: 257 ETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKG 316

Query: 233 DLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITT 292
            ++++ +   F EM+  GVQPD +T+N+LL+ C+  GL + A  +F  M    I  ++ +
Sbjct: 317 GMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFS 376

Query: 293 YSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQ 352
           Y+ +++   K G+++    +L +M  +  +P++ SY+ +I+  AK+G   EA+++F +M+
Sbjct: 377 YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436

Query: 353 AAGCVPNASTYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFK 412
             G   +  +Y+ LL++Y K GR ++  ++  EM     + D  TYN L+  +G+ G + 
Sbjct: 437 YLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD 496

Query: 413 EVVTLFHDLVEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSKAYSGLI 472
           EV  +F ++  E + PN+ TY  L+    KGGL+++A +I       G+      YS LI
Sbjct: 497 EVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556

Query: 473 EAYGQAALYDEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILLRMREYG-- 532
           +A  +  L   A+   + M + G    V TYNS+I  F R        A + R  +Y   
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR-------SATMDRSADYSNG 616

Query: 533 ----ISRNTKSFSGIIEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLV 592
                S +  S     EG R    F +            CE   Q L  +L         
Sbjct: 617 GSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCIL--------- 676

Query: 593 DESKEQFQEIKASGILPSVLCYCMMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQM 652
               E F+++    I P+V+ +  +L   ++   ++DA  LL+E ++   + ++ V+  +
Sbjct: 677 ----EVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEE-LRLFDNKVYGVVHGL 736

Query: 653 IKGDYDDDSNWQMVEYVFDKLNAEGCGLGMRFYNTLLEALWWLGQKGRAARVLTEATKRG 712
           + G    ++ W   + +FDK+N         FYN L + LW  GQK  A  V  E   R 
Sbjct: 737 LMG--QRENVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQKRGAELVALEGRSRQ 796

Query: 713 LFPELFRKSKLVWSVDVHRMWEGGAYTAISLWINKMNEMLMDGEDLPQLAAVVVGGWSEK 772
           ++  ++  S L    D+H M  G A   +  W+  +  ++ +G +LP++ +++  GW + 
Sbjct: 797 VWENVWSDSCL----DLHLMSSGAARAMVHAWLLNIRSIVYEGHELPKVLSILT-GWGKH 856

Query: 773 DSAAQNLPIARAVYSFLQDNVSSSFTFPRWNNGRIVCQQSQLKQLLSEA 815
                +  + RAV   L+  + + F   + N GR     S +   L E+
Sbjct: 857 SKVVGDGALRRAVEVLLR-GMDAPFHLSKCNMGRFTSSGSVVATWLRES 876

BLAST of Lsi02G003410 vs. TAIR 10
Match: AT2G18940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 298.1 bits (762), Expect = 2.3e-80
Identity = 173/635 (27.24%), Postives = 311/635 (48.98%), Query Frame = 0

Query: 86  LINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFKEFAARGDWQRSLRLFKYM---QRQI 145
           L+N +   P  G ++R  D  K+ L   D   + K     G W+R++ LF+++       
Sbjct: 111 LVNSIVEQPLTG-LSRFFDSVKSELLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSG 170

Query: 146 WCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETS 205
             K +  +  I + +LGRE      +++ D++  Q  +  V +YT +++AY R G+YE +
Sbjct: 171 ALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKA 230

Query: 206 LELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLS 265
           ++L ERMK    SP ++TYN +++   +    W  +LG+  EMR +G++ D  T +T+LS
Sbjct: 231 IDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLS 290

Query: 266 ACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLP 325
           ACA  GL  EA+  F  +   G  P   TY+ +++ FGK G   +   +LKEME      
Sbjct: 291 ACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPA 350

Query: 326 DISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELF 385
           D  +YN L+ A+ ++G  KEA  V + M   G +PNA TY+ +++ YGK G+ D+  +LF
Sbjct: 351 DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLF 410

Query: 386 LEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVEEKIDPNMETYEGLVFACGKG 445
             MKE+   P+  TYN ++ + G+     E++ +  D+      PN  T+  ++  CG  
Sbjct: 411 YSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNK 470

Query: 446 GLHEDAKKILLHMNEKGMVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTVDTY 505
           G+ +   ++   M   G  P    ++ LI AYG+     +A   +  M   G  + V TY
Sbjct: 471 GMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTY 530

Query: 506 NSLIHTFARGGLYKEFEAILLRMREYGISRNTKSFSGIIEGYRQSGQFEEAIKAFVEMEK 565
           N+L++  AR G ++  E ++  M+  G      S+S +++ Y + G +    +    +++
Sbjct: 531 NALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKE 590

Query: 566 MRCEPDEQTLEAVLGVYCFAGLVDESKEQFQEIKASGILPSVLCYCMMLAVYAKNGRWDD 625
            +  P    L  +L        +  S+  F   K  G  P ++ +  ML+++ +N  +D 
Sbjct: 591 GQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQ 650

Query: 626 AYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGLGMRFYNTLL 685
           A  +L+ + ++ +S        ++         W+  E +   L        +  YNT++
Sbjct: 651 AEGILESIREDGLSPDLVTYNSLMDMYVRRGECWK-AEEILKTLEKSQLKPDLVSYNTVI 710

Query: 686 EALWWLGQKGRAARVLTEATKRGLFPELFRKSKLV 718
           +     G    A R+L+E T+RG+ P +F  +  V
Sbjct: 711 KGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFV 743

BLAST of Lsi02G003410 vs. TAIR 10
Match: AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 283.5 bits (724), Expect = 5.7e-76
Identity = 151/599 (25.21%), Postives = 299/599 (49.92%), Query Frame = 0

Query: 131 SLRLFKYM--QRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTA 190
           +LR F +   Q+      +  +  I+IS+LG+EG +   + +F+ +   G    V+SYT+
Sbjct: 154 ALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTS 213

Query: 191 LINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHE 250
           LI+A+  +G+Y  ++ + ++M+ +   P ++TYN ++N   +    W  +  L  +M+ +
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273

Query: 251 GVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKV 310
           G+ PD  TYNTL++ C    L  EA  VF+ M   G   +  TY+ +++ +GK  + ++ 
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333

Query: 311 AMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNASTYSILLNL 370
             +L EM   G+ P I +YN LI A+A+ G + EAM++  QM   G  P+  TY+ LL+ 
Sbjct: 334 MKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393

Query: 371 YGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVEEKIDPN 430
           + + G+ +    +F EM+ +  +P+  T+N  I+++G  G F E++ +F ++    + P+
Sbjct: 394 FERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD 453

Query: 431 METYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSKAYSGLIEAYGQAALYDEALVAFN 490
           + T+  L+   G+ G+  +   +   M   G VP  + ++ LI AY +   +++A+  + 
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513

Query: 491 TMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILLRMREYGISRNTKSFSGIIEGYRQSG 550
            M + G    + TYN+++   ARGG++++ E +L  M +     N  ++  ++  Y    
Sbjct: 514 RMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGK 573

Query: 551 QFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFQEIKASGILPSVLCYC 610
           +         E+     EP    L+ ++ V     L+ E++  F E+K  G  P +    
Sbjct: 574 EIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLN 633

Query: 611 MMLAVYAKNGRWDDAYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNA 670
            M+++Y +      A  +LD M K R  +        +   +   +++   E +  ++ A
Sbjct: 634 SMVSIYGRRQMVAKANGVLDYM-KERGFTPSMATYNSLMYMHSRSADFGKSEEILREILA 693

Query: 671 EGCGLGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPELFRKSKLVWSVDVHRMWE 728
           +G    +  YNT++ A     +   A+R+ +E    G+ P++   +  + S     M+E
Sbjct: 694 KGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFE 751

BLAST of Lsi02G003410 vs. TAIR 10
Match: AT2G41720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 250.0 bits (637), Expect = 7.0e-66
Identity = 169/605 (27.93%), Postives = 295/605 (48.76%), Query Frame = 0

Query: 45  FSDDWSLSSDVGKCRA----KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIA 104
           F  DWS+S  V +  A    +  D VL   S +    + ++ V  LI +LS    RG I 
Sbjct: 72  FQKDWSVSEVVDRLMALNRWEEVDGVLN--SWVGRFARKNFPV--LIRELSR---RGCIE 131

Query: 105 RCLDIF------KNRLSLNDFSLVFKEFAARGDWQRSLR-LFKYMQRQIW-CKPNEHIYT 164
            C+++F      KN  + ND   +     AR +W    R LF  MQ+  W CKP+   Y 
Sbjct: 132 LCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQK--WSCKPDAETYD 191

Query: 165 IMISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRE 224
            +I+  GR G       + D+M    +  S  +Y  LINA G +G +  +LE+ ++M   
Sbjct: 192 ALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDN 251

Query: 225 RVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDE 284
            V P+++T+N V++A   G   +   L  F  M+   V+PD  T+N ++   +  G   +
Sbjct: 252 GVGPDLVTHNIVLSAYKSG-RQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQ 311

Query: 285 AEMVFKTMIE--GGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVL 344
           A  +F +M E      P++ T++ I+  +   G++E    + + M +EG  P+I SYN L
Sbjct: 312 ALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNAL 371

Query: 345 IEAHAKSGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLEMKESSA 404
           + A+A  G    A+ V   ++  G +P+  +Y+ LLN YG+  +    +E+FL M++   
Sbjct: 372 MGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR 431

Query: 405 EPDATTYNILIRVFGEGGYFKEVVTLFHDLVEEKIDPNMETYEGLVFACGKGGLHEDAKK 464
           +P+  TYN LI  +G  G+  E V +F  + ++ I PN+ +   L+ AC +     +   
Sbjct: 432 KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDT 491

Query: 465 ILLHMNEKGMVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTVDTYNSLIHTFA 524
           +L     +G+  ++ AY+  I +Y  AA  ++A+  + +M +   K+   T+  LI    
Sbjct: 492 VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 551

Query: 525 RGGLYKEFEAILLRMREYGISRNTKSFSGIIEGYRQSGQFEEAIKAFVEMEKMRCEPDEQ 584
           R   Y E  + L  M +  I    + +S ++  Y + GQ  EA   F +M+   CEPD  
Sbjct: 552 RMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVI 611

Query: 585 TLEAVLGVYCFAGLVDESKEQFQEIKASGILPSVLCYCMMLAVYAKNGRWDDAYELLDEM 636
              ++L  Y  +    ++ E F E++A+GI P  +    ++  + K G+  + + L+D M
Sbjct: 612 AYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLM 666

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9S7Q20.0e+0070.82Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop... [more]
Q9SIC99.8e-8126.80Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop... [more]
O646243.2e-7927.24Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidop... [more]
B8Y6I07.3e-7628.41Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=457... [more]
Q9LYZ98.1e-7525.21Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A1S3AVM10.0e+0095.38pentatricopeptide repeat-containing protein At1g74850, chloroplastic isoform X2 ... [more]
A0A5D3BJ340.0e+0095.38Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5A7UKU10.0e+0095.38Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3AUM40.0e+0095.27pentatricopeptide repeat-containing protein At1g74850, chloroplastic isoform X1 ... [more]
A0A0A0LW620.0e+0094.80Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045740 PE=3 SV... [more]
Match NameE-valueIdentityDescription
XP_038894204.10.0e+0097.46pentatricopeptide repeat-containing protein At1g74850, chloroplastic isoform X2 ... [more]
XP_038894203.10.0e+0097.35pentatricopeptide repeat-containing protein At1g74850, chloroplastic isoform X1 ... [more]
XP_008437858.10.0e+0095.38PREDICTED: pentatricopeptide repeat-containing protein At1g74850, chloroplastic ... [more]
TYJ99127.10.0e+0095.38pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
KAA0055197.10.0e+0095.38pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
AT1G74850.10.0e+0070.82plastid transcriptionally active 2 [more]
AT2G31400.17.0e-8226.80genomes uncoupled 1 [more]
AT2G18940.12.3e-8027.24Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G02860.15.7e-7625.21Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G41720.17.0e-6627.93Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002625Smr domainSMARTSM00463SMR_2coord: 717..805
e-value: 0.0015
score: 27.8
IPR002625Smr domainPROSITEPS50828SMRcoord: 720..808
score: 8.704985
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 479..636
e-value: 1.5E-34
score: 121.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 354..436
e-value: 9.6E-21
score: 75.9
coord: 94..232
e-value: 1.8E-36
score: 127.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 233..351
e-value: 2.8E-32
score: 114.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 291..324
e-value: 2.5E-5
score: 22.1
coord: 501..533
e-value: 2.0E-5
score: 22.5
coord: 326..359
e-value: 1.4E-10
score: 38.7
coord: 150..180
e-value: 3.9E-6
score: 24.7
coord: 536..569
e-value: 7.4E-7
score: 27.0
coord: 255..287
e-value: 1.3E-7
score: 29.3
coord: 606..635
e-value: 3.9E-7
score: 27.8
coord: 396..428
e-value: 4.4E-6
score: 24.5
coord: 184..218
e-value: 1.2E-8
score: 32.6
coord: 361..394
e-value: 4.1E-8
score: 30.9
coord: 220..253
e-value: 3.9E-4
score: 18.4
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 599..630
e-value: 1.9E-6
score: 27.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 533..580
e-value: 3.0E-7
score: 30.5
coord: 322..367
e-value: 5.6E-14
score: 52.1
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 241..301
e-value: 1.9E-13
score: 50.3
coord: 373..406
e-value: 0.0065
score: 16.5
coord: 170..228
e-value: 1.4E-15
score: 57.1
coord: 416..476
e-value: 1.4E-5
score: 25.0
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 501..530
e-value: 8.8E-4
score: 19.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 393..427
score: 10.621557
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 147..181
score: 10.259834
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 603..637
score: 10.950397
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 182..216
score: 12.58363
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 323..357
score: 13.372844
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 217..252
score: 11.279235
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 288..322
score: 10.172144
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 498..532
score: 9.97484
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 428..462
score: 10.128299
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 358..392
score: 12.33152
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 568..602
score: 9.470621
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 533..567
score: 11.224429
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 253..287
score: 12.58363
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 842..866
NoneNo IPR availablePANTHERPTHR47937:SF1PLASTID TRANSCRIPTIONALLY ACTIVE CHROMOSOME 2-LIKE PROTEINcoord: 34..827
NoneNo IPR availablePANTHERPTHR47937PLASTID TRANSCRIPTIONALLY ACTIVE CHROMOSOME 2-LIKE PROTEINcoord: 34..827

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G003410.1Lsi02G003410.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042793 plastid transcription
biological_process GO:0045893 positive regulation of transcription, DNA-templated
cellular_component GO:0009507 chloroplast
molecular_function GO:0005515 protein binding