Lsi02G001760 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi02G001760
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr02: 1474502 .. 1475188 (-)
RNA-Seq ExpressionLsi02G001760
SyntenyLsi02G001760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAATTACTCTGACAAGAAGCGAGTCCGCGACGAGTTCGACGATTCGCTAGCCGATTCGGCTGAGTCGAAGCTCAGACGACTTAACTCGTCGGATTTGAGATTGGTGAAGCCATGCACTAAGGAGAATTTGAATGTTGTTCAAGATTCAGCCGCTGTTGCCGGTGATTTGAATCTTGATGATTTGGTGGAATCTGAGGAGATTCAGGATGAGTTACTCAACATCCTTGAAGATGTCGATGCTGTAGCGGAACGGGATGAGAGTATTGAAGGTCTTGAATTGGATTCGTTTATTAAAAGCTTCGAGGAAGAGATTCAAGCCTTGCCGTCGGCGAAATCGGCGGCGGCGGATCAGAATGAAAGTCCTCAGGTGGAACTTGGATATCTTTTTGGAGCGTCGGATGATGAGCTAGGGCTACCGCCGAGGGGAGGGTTAAGTACGGAAGGGAAGATGGAGGCGATTGATTTTATGCCTGCTTGTTGTTCTCCTGATGTGTTTGAGTTGGAAGGGAAGTTAGGGTTTGGAGATGAGATTCCGTGTTACGACTCGTTCGAGTTGGGAATGGGGATTGGTTCCGGTGCGGCGGAGGAGAATGGGTTGGGCGGCGGAGAGTTTGTTGCATTGGGCGGTTTGTTTGATTATTCGGACGTGCCGTTTCGGCCGGAGTCGTTATCGGCTTTGTAG

mRNA sequence

ATGGAAAATTACTCTGACAAGAAGCGAGTCCGCGACGAGTTCGACGATTCGCTAGCCGATTCGGCTGAGTCGAAGCTCAGACGACTTAACTCGTCGGATTTGAGATTGGTGAAGCCATGCACTAAGGAGAATTTGAATGTTGTTCAAGATTCAGCCGCTGTTGCCGGTGATTTGAATCTTGATGATTTGGTGGAATCTGAGGAGATTCAGGATGAGTTACTCAACATCCTTGAAGATGTCGATGCTGTAGCGGAACGGGATGAGAGTATTGAAGGTCTTGAATTGGATTCGTTTATTAAAAGCTTCGAGGAAGAGATTCAAGCCTTGCCGTCGGCGAAATCGGCGGCGGCGGATCAGAATGAAAGTCCTCAGGTGGAACTTGGATATCTTTTTGGAGCGTCGGATGATGAGCTAGGGCTACCGCCGAGGGGAGGGTTAAGTACGGAAGGGAAGATGGAGGCGATTGATTTTATGCCTGCTTGTTGTTCTCCTGATGTGTTTGAGTTGGAAGGGAAGTTAGGGTTTGGAGATGAGATTCCGTGTTACGACTCGTTCGAGTTGGGAATGGGGATTGGTTCCGGTGCGGCGGAGGAGAATGGGTTGGGCGGCGGAGAGTTTGTTGCATTGGGCGGTTTGTTTGATTATTCGGACGTGCCGTTTCGGCCGGAGTCGTTATCGGCTTTGTAG

Coding sequence (CDS)

ATGGAAAATTACTCTGACAAGAAGCGAGTCCGCGACGAGTTCGACGATTCGCTAGCCGATTCGGCTGAGTCGAAGCTCAGACGACTTAACTCGTCGGATTTGAGATTGGTGAAGCCATGCACTAAGGAGAATTTGAATGTTGTTCAAGATTCAGCCGCTGTTGCCGGTGATTTGAATCTTGATGATTTGGTGGAATCTGAGGAGATTCAGGATGAGTTACTCAACATCCTTGAAGATGTCGATGCTGTAGCGGAACGGGATGAGAGTATTGAAGGTCTTGAATTGGATTCGTTTATTAAAAGCTTCGAGGAAGAGATTCAAGCCTTGCCGTCGGCGAAATCGGCGGCGGCGGATCAGAATGAAAGTCCTCAGGTGGAACTTGGATATCTTTTTGGAGCGTCGGATGATGAGCTAGGGCTACCGCCGAGGGGAGGGTTAAGTACGGAAGGGAAGATGGAGGCGATTGATTTTATGCCTGCTTGTTGTTCTCCTGATGTGTTTGAGTTGGAAGGGAAGTTAGGGTTTGGAGATGAGATTCCGTGTTACGACTCGTTCGAGTTGGGAATGGGGATTGGTTCCGGTGCGGCGGAGGAGAATGGGTTGGGCGGCGGAGAGTTTGTTGCATTGGGCGGTTTGTTTGATTATTCGGACGTGCCGTTTCGGCCGGAGTCGTTATCGGCTTTGTAG

Protein sequence

MENYSDKKRVRDEFDDSLADSAESKLRRLNSSDLRLVKPCTKENLNVVQDSAAVAGDLNLDDLVESEEIQDELLNILEDVDAVAERDESIEGLELDSFIKSFEEEIQALPSAKSAAADQNESPQVELGYLFGASDDELGLPPRGGLSTEGKMEAIDFMPACCSPDVFELEGKLGFGDEIPCYDSFELGMGIGSGAAEENGLGGGEFVALGGLFDYSDVPFRPESLSAL
Homology
BLAST of Lsi02G001760 vs. ExPASy TrEMBL
Match: A0A0A0LQD5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042270 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.2e-89
Identity = 193/239 (80.75%), Postives = 208/239 (87.03%), Query Frame = 0

Query: 1   MENYS-DKKRVRDEF-DDSLADSAESKLRRLNSSDLRLVKPCTKENLNVVQDSAAVAGDL 60
           M+N+S D+KRV DE  DDSLADSAESKLRRLNSSDLR+ KPCTKE+ NVVQ S+A+AGDL
Sbjct: 1   MDNFSEDRKRVHDELDDDSLADSAESKLRRLNSSDLRIGKPCTKEDFNVVQGSSAIAGDL 60

Query: 61  NLDDLVESEEIQDE-LLNILEDVDAVAERDES-IEGLELDSFIKSFEEEIQALPSAKSAA 120
           N+DDLVESEEIQDE LLNILED D VAERDES IEGLELDSFIKSFEEEIQ +PS+    
Sbjct: 61  NIDDLVESEEIQDELLLNILEDSDVVAERDESAIEGLELDSFIKSFEEEIQGVPSSVDDQ 120

Query: 121 ADQNESPQVELGYLFGASDDELGLPPRGGLS--TEG-KMEAIDFMP--ACCSPDVFELEG 180
            + NE+PQ ELGYLFGASDDELGLPP GGLS  TEG KMEAIDFMP  + CSPDVFELEG
Sbjct: 121 NNNNETPQAELGYLFGASDDELGLPPSGGLSSTTEGKKMEAIDFMPPASSCSPDVFELEG 180

Query: 181 KLGFGDEIPCYDSFELGMGIGSGA--AEENGLGGGEFVALGGLFDYSDVPFRPESLSAL 229
           KLGF D+IPCYDSFELGMGIGSGA  AE+NGLGGGEFVALGGLFDYSDV FRPESL AL
Sbjct: 181 KLGFDDDIPCYDSFELGMGIGSGAAVAEDNGLGGGEFVALGGLFDYSDVLFRPESLPAL 239

BLAST of Lsi02G001760 vs. ExPASy TrEMBL
Match: A0A6J1E811 (uncharacterized protein LOC111431577 OS=Cucurbita moschata OX=3662 GN=LOC111431577 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 3.3e-79
Identity = 174/231 (75.32%), Postives = 192/231 (83.12%), Query Frame = 0

Query: 1   MENYSD-KKRVRDEFDDSLADSAESKLRRLNSSDLRLVKPCTKENLNVVQDSAAVAGDLN 60
           MEN +D KKR+  EFDDSLADSAESKLRRL+SSD   + PCT+ N NVVQD  +VA D  
Sbjct: 1   MENCTDNKKRLLSEFDDSLADSAESKLRRLDSSDFSSLNPCTEGNWNVVQDLESVA-DFT 60

Query: 61  LDDLVESEEIQDELLNILEDVDAVAERDESIEGLELDSFIKSFEEEIQALPSAKSAAADQ 120
           + +L ES +IQD+LLNILED D V ERDESIEGLELDSFI+SFEEEIQALPS K+  + Q
Sbjct: 61  I-NLSESHDIQDDLLNILEDSDVVLERDESIEGLELDSFIRSFEEEIQALPSVKT-PSHQ 120

Query: 121 NESPQVELGYLFGASDDELGLPPRGGLSTEGK-MEAIDFMPACCS-PDVFELEGKLGFGD 180
           NE+PQVELGYL+GASDDELGLPP GGLST+GK  EAIDFMPA  S P VFEL+G  GF D
Sbjct: 121 NETPQVELGYLYGASDDELGLPPTGGLSTDGKRTEAIDFMPASSSPPGVFELDGNAGFED 180

Query: 181 EIPCYDSFELGMGIGSGAAEENGLGGGEFVALGGLFDYSDVPFRPESLSAL 229
           EIPCYD FE+GMG  SGAAEENGL GGEFVALGGLFDYSDVPFRPESLSAL
Sbjct: 181 EIPCYDLFEIGMGFSSGAAEENGL-GGEFVALGGLFDYSDVPFRPESLSAL 227

BLAST of Lsi02G001760 vs. ExPASy TrEMBL
Match: A0A6J1GR95 (uncharacterized protein LOC111456805 OS=Cucurbita moschata OX=3662 GN=LOC111456805 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 4.0e-77
Identity = 164/229 (71.62%), Postives = 188/229 (82.10%), Query Frame = 0

Query: 1   MENYSD-KKRVRDEFDDSLADSAESKLRRLNSSDLRLVKPCTKENLNVVQDSAAVAGDLN 60
           MEN +D +KR RDE D SLADSAESKLRRLNS + R VKPC+K      +   +  GDL 
Sbjct: 1   MENCTDNRKRDRDELDVSLADSAESKLRRLNSMESRFVKPCSKS-----EQVGSDGGDLR 60

Query: 61  LDDLVESEEIQDELLNILEDVDAVAERDESIEGLELDSFIKSFEEEIQALPSAKSAAADQ 120
           + DL +S+EIQD+LLNILED D VAERDESI+G ELDSFI+SFEEEI ALP A++ +++Q
Sbjct: 61  I-DLADSDEIQDKLLNILEDSDVVAERDESIQGFELDSFIRSFEEEIHALPPAET-SSNQ 120

Query: 121 NESPQVELGYLFGASDDELGLPPRGGLSTEGKMEAIDFMPACCSPDVFELEGKLGFGDEI 180
           NE+PQ ELGYLF ASDDELGLPP  G S EGK+EAIDF PAC  P VFE++G +GF DEI
Sbjct: 121 NETPQAELGYLFEASDDELGLPPTVGSSNEGKIEAIDFTPACSWPGVFEMDGNVGFEDEI 180

Query: 181 PCYDSFELGMGIGSGAAEENGLGGGEFVALGGLFDYSDVPFRPESLSAL 229
           PCYDSFE+G+GIGSGAAEENGL GGEFVALGGLFDYSDVPFRPESLSAL
Sbjct: 181 PCYDSFEIGIGIGSGAAEENGL-GGEFVALGGLFDYSDVPFRPESLSAL 221

BLAST of Lsi02G001760 vs. ExPASy TrEMBL
Match: A0A6J1K097 (uncharacterized protein LOC111489916 OS=Cucurbita maxima OX=3661 GN=LOC111489916 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.6e-73
Identity = 158/229 (69.00%), Postives = 182/229 (79.48%), Query Frame = 0

Query: 1   MENYSD-KKRVRDEFDDSLADSAESKLRRLNSSDLRLVKPCTKENLNVVQDSAAVAGDLN 60
           MEN +D +KR RD+ D SLADSAESKLRRLN ++ R VKPC+K       +     GD  
Sbjct: 1   MENCTDNRKRDRDKLDVSLADSAESKLRRLNPTESRFVKPCSK------SEQVGSDGDDL 60

Query: 61  LDDLVESEEIQDELLNILEDVDAVAERDESIEGLELDSFIKSFEEEIQALPSAKSAAADQ 120
             DL +S+EI D+LLNILED D VAERDE I+G ELDSFI+SFEEEI ALP A++ +++Q
Sbjct: 61  RIDLADSDEIHDKLLNILEDSDVVAERDECIQGFELDSFIRSFEEEIHALPPAET-SSNQ 120

Query: 121 NESPQVELGYLFGASDDELGLPPRGGLSTEGKMEAIDFMPACCSPDVFELEGKLGFGDEI 180
           NE+PQ ELGYLF ASDDELGLPP  G S EG +EAIDF PAC  P VFE++G +GF DEI
Sbjct: 121 NETPQAELGYLFEASDDELGLPPTVGSSNEGTIEAIDFTPACSWPGVFEMDGNVGFEDEI 180

Query: 181 PCYDSFELGMGIGSGAAEENGLGGGEFVALGGLFDYSDVPFRPESLSAL 229
           PCYDSFE+G+GIGSGAAEENGL GGEFVALGGLFDYSDVPFRPESLSAL
Sbjct: 181 PCYDSFEIGIGIGSGAAEENGL-GGEFVALGGLFDYSDVPFRPESLSAL 221

BLAST of Lsi02G001760 vs. ExPASy TrEMBL
Match: A0A251PC24 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G220600 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.5e-31
Identity = 121/255 (47.45%), Postives = 152/255 (59.61%), Query Frame = 0

Query: 1   MENYSDKKRVRDEFDDSLADS----AESKLRRLNSSDLRLVKPCTKENLNVVQDS--AAV 60
           M+N  +  R R  +D    ++     ESKL R+NSS       C+ E+ + V DS  + V
Sbjct: 1   MDNSINHNRKRPRYDSDHPETNHTQPESKLVRVNSSH---SVTCSPESGSTVFDSTNSEV 60

Query: 61  AGDLNL---------DDLV-ESEE---IQDELLNILEDVDAVAERDESIEGLELDSFIKS 120
             D +L         D+LV ESEE   IQD+LLNIL+D D V +RD +I+  +LDS IKS
Sbjct: 61  NSDESLTPQPVRVDSDELVMESEEVKLIQDDLLNILDDSDTVTDRDPAIQ--DLDSVIKS 120

Query: 121 FEEEIQ--ALPSAKSAAADQNESPQVELGYLFGASDDELGLPPRGGLSTEGKMEAIDFMP 180
           FEEEIQ  A P +++ ++    S Q ELGYL  ASDDELGLPP  G S +GK+EA DF  
Sbjct: 121 FEEEIQVPAFPVSETTSSPGGSS-QPELGYLLEASDDELGLPPTNGGSEDGKLEAADFTS 180

Query: 181 ACCSPDVFELEGKLGF-GDEIPCYDSFELGMGIGSGAAEENGLGGGEFVALGGLFDY--- 229
           +    +   L+G LGF  D IP YDSFELG+G G      N  GG E+VALGGLFDY   
Sbjct: 181 S--GSEAVGLDGMLGFENDIIPNYDSFELGIG-GDCNLNNNYNGGAEYVALGGLFDYSDG 240

BLAST of Lsi02G001760 vs. NCBI nr
Match: XP_038894861.1 (uncharacterized protein LOC120083261 [Benincasa hispida])

HSP 1 Score: 360.5 bits (924), Expect = 1.0e-95
Identity = 200/230 (86.96%), Postives = 202/230 (87.83%), Query Frame = 0

Query: 1   MENYS-DKKRVRDEFDDSLADSAESKLRRLNSSDLRLVKPCTKENLNVVQDSAAVAGDLN 60
           MENYS DKKRVRDEFDDSLADSAESKLRRLNS          KENLNV       AGDLN
Sbjct: 1   MENYSQDKKRVRDEFDDSLADSAESKLRRLNS----------KENLNV------AAGDLN 60

Query: 61  LDDLVESEEIQDELLNILEDVDAVAERDESIEGLELDSFIKSFEEEIQALPSAKSAAADQ 120
           +DDLVESEEIQDELLNILED DAVAERDESIEGLELDSFIKSFEEEIQALPS     ADQ
Sbjct: 61  IDDLVESEEIQDELLNILEDSDAVAERDESIEGLELDSFIKSFEEEIQALPS-----ADQ 120

Query: 121 NESPQVELGYLFGASDDELGLPP-RGGLSTEGKMEAIDFMPACCSPDVFELEGKLGFGDE 180
           NE+PQ ELGYLFGASDDELGLPP RGGLSTEGKMEA DFMPACCSPDVFELEGKLGFGDE
Sbjct: 121 NETPQAELGYLFGASDDELGLPPSRGGLSTEGKMEATDFMPACCSPDVFELEGKLGFGDE 180

Query: 181 IPCYDSFELGMGIGSGAAEENGLGGGEFVALGGLFDYSDVPFRPESLSAL 229
           IPCYDSFELGMGIGSGAAEENGLG GEFVALGGLFDYSDVPFRPESLSAL
Sbjct: 181 IPCYDSFELGMGIGSGAAEENGLGAGEFVALGGLFDYSDVPFRPESLSAL 209

BLAST of Lsi02G001760 vs. NCBI nr
Match: XP_011660345.1 (uncharacterized protein LOC105436376 [Cucumis sativus] >KGN64115.1 hypothetical protein Csa_013822 [Cucumis sativus])

HSP 1 Score: 339.3 bits (869), Expect = 2.5e-89
Identity = 193/239 (80.75%), Postives = 208/239 (87.03%), Query Frame = 0

Query: 1   MENYS-DKKRVRDEF-DDSLADSAESKLRRLNSSDLRLVKPCTKENLNVVQDSAAVAGDL 60
           M+N+S D+KRV DE  DDSLADSAESKLRRLNSSDLR+ KPCTKE+ NVVQ S+A+AGDL
Sbjct: 1   MDNFSEDRKRVHDELDDDSLADSAESKLRRLNSSDLRIGKPCTKEDFNVVQGSSAIAGDL 60

Query: 61  NLDDLVESEEIQDE-LLNILEDVDAVAERDES-IEGLELDSFIKSFEEEIQALPSAKSAA 120
           N+DDLVESEEIQDE LLNILED D VAERDES IEGLELDSFIKSFEEEIQ +PS+    
Sbjct: 61  NIDDLVESEEIQDELLLNILEDSDVVAERDESAIEGLELDSFIKSFEEEIQGVPSSVDDQ 120

Query: 121 ADQNESPQVELGYLFGASDDELGLPPRGGLS--TEG-KMEAIDFMP--ACCSPDVFELEG 180
            + NE+PQ ELGYLFGASDDELGLPP GGLS  TEG KMEAIDFMP  + CSPDVFELEG
Sbjct: 121 NNNNETPQAELGYLFGASDDELGLPPSGGLSSTTEGKKMEAIDFMPPASSCSPDVFELEG 180

Query: 181 KLGFGDEIPCYDSFELGMGIGSGA--AEENGLGGGEFVALGGLFDYSDVPFRPESLSAL 229
           KLGF D+IPCYDSFELGMGIGSGA  AE+NGLGGGEFVALGGLFDYSDV FRPESL AL
Sbjct: 181 KLGFDDDIPCYDSFELGMGIGSGAAVAEDNGLGGGEFVALGGLFDYSDVLFRPESLPAL 239

BLAST of Lsi02G001760 vs. NCBI nr
Match: KAG6584364.1 (hypothetical protein SDJN03_20296, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 308.1 bits (788), Expect = 6.1e-80
Identity = 176/231 (76.19%), Postives = 193/231 (83.55%), Query Frame = 0

Query: 1   MENYSD-KKRVRDEFDDSLADSAESKLRRLNSSDLRLVKPCTKENLNVVQDSAAVAGDLN 60
           MEN +D KKR+  EFDDSLADSAESKLRRL+SSD   + PCTK N NVVQD  +VA D  
Sbjct: 1   MENCTDNKKRLLSEFDDSLADSAESKLRRLDSSDFSSLNPCTKGNWNVVQDLESVA-DFT 60

Query: 61  LDDLVESEEIQDELLNILEDVDAVAERDESIEGLELDSFIKSFEEEIQALPSAKSAAADQ 120
           + +L ES +IQD+LLNILED D V ERDESIEGLELDSFI+SFEEEIQALPS K+  + Q
Sbjct: 61  I-NLSESHDIQDDLLNILEDSDVVLERDESIEGLELDSFIRSFEEEIQALPSVKT-PSHQ 120

Query: 121 NESPQVELGYLFGASDDELGLPPRGGLSTEGK-MEAIDFMPACCS-PDVFELEGKLGFGD 180
           NE+PQVELGYL+GASDDELGLPP GGLST+GK MEAIDFMPA  S P VFEL+G  GF D
Sbjct: 121 NETPQVELGYLYGASDDELGLPPTGGLSTDGKRMEAIDFMPASSSPPGVFELDGNAGFED 180

Query: 181 EIPCYDSFELGMGIGSGAAEENGLGGGEFVALGGLFDYSDVPFRPESLSAL 229
           EIPCYD FE+GMG  SGAAEENGL GGEFVALGGLFDYSDVPFRPESLSAL
Sbjct: 181 EIPCYDLFEIGMGYSSGAAEENGL-GGEFVALGGLFDYSDVPFRPESLSAL 227

BLAST of Lsi02G001760 vs. NCBI nr
Match: KAG7019949.1 (hypothetical protein SDJN02_18916, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 306.2 bits (783), Expect = 2.3e-79
Identity = 175/231 (75.76%), Postives = 193/231 (83.55%), Query Frame = 0

Query: 1   MENYSD-KKRVRDEFDDSLADSAESKLRRLNSSDLRLVKPCTKENLNVVQDSAAVAGDLN 60
           MEN +D KKR+  EFDDSLADSAESKLRRL+SSD   + PCTK + NVVQD  +VA D  
Sbjct: 1   MENCTDNKKRLLSEFDDSLADSAESKLRRLDSSDFSSLNPCTKGSWNVVQDLESVA-DFT 60

Query: 61  LDDLVESEEIQDELLNILEDVDAVAERDESIEGLELDSFIKSFEEEIQALPSAKSAAADQ 120
           + +L ES +IQD+LLNILED D V ERDESIEGLELDSFI+SFEEEIQALPS K+  + Q
Sbjct: 61  I-NLSESHDIQDDLLNILEDSDVVLERDESIEGLELDSFIRSFEEEIQALPSIKT-PSHQ 120

Query: 121 NESPQVELGYLFGASDDELGLPPRGGLSTEGK-MEAIDFMPACCS-PDVFELEGKLGFGD 180
           NE+PQVELGYL+GASDDELGLPP GGLST+GK MEAIDFMPA  S P VFEL+G  GF D
Sbjct: 121 NETPQVELGYLYGASDDELGLPPTGGLSTDGKRMEAIDFMPASSSPPGVFELDGNAGFED 180

Query: 181 EIPCYDSFELGMGIGSGAAEENGLGGGEFVALGGLFDYSDVPFRPESLSAL 229
           EIPCYD FE+GMG  SGAAEENGL GGEFVALGGLFDYSDVPFRPESLSAL
Sbjct: 181 EIPCYDLFEIGMGFSSGAAEENGL-GGEFVALGGLFDYSDVPFRPESLSAL 227

BLAST of Lsi02G001760 vs. NCBI nr
Match: XP_022924029.1 (uncharacterized protein LOC111431577 [Cucurbita moschata])

HSP 1 Score: 304.7 bits (779), Expect = 6.8e-79
Identity = 174/231 (75.32%), Postives = 192/231 (83.12%), Query Frame = 0

Query: 1   MENYSD-KKRVRDEFDDSLADSAESKLRRLNSSDLRLVKPCTKENLNVVQDSAAVAGDLN 60
           MEN +D KKR+  EFDDSLADSAESKLRRL+SSD   + PCT+ N NVVQD  +VA D  
Sbjct: 1   MENCTDNKKRLLSEFDDSLADSAESKLRRLDSSDFSSLNPCTEGNWNVVQDLESVA-DFT 60

Query: 61  LDDLVESEEIQDELLNILEDVDAVAERDESIEGLELDSFIKSFEEEIQALPSAKSAAADQ 120
           + +L ES +IQD+LLNILED D V ERDESIEGLELDSFI+SFEEEIQALPS K+  + Q
Sbjct: 61  I-NLSESHDIQDDLLNILEDSDVVLERDESIEGLELDSFIRSFEEEIQALPSVKT-PSHQ 120

Query: 121 NESPQVELGYLFGASDDELGLPPRGGLSTEGK-MEAIDFMPACCS-PDVFELEGKLGFGD 180
           NE+PQVELGYL+GASDDELGLPP GGLST+GK  EAIDFMPA  S P VFEL+G  GF D
Sbjct: 121 NETPQVELGYLYGASDDELGLPPTGGLSTDGKRTEAIDFMPASSSPPGVFELDGNAGFED 180

Query: 181 EIPCYDSFELGMGIGSGAAEENGLGGGEFVALGGLFDYSDVPFRPESLSAL 229
           EIPCYD FE+GMG  SGAAEENGL GGEFVALGGLFDYSDVPFRPESLSAL
Sbjct: 181 EIPCYDLFEIGMGFSSGAAEENGL-GGEFVALGGLFDYSDVPFRPESLSAL 227

BLAST of Lsi02G001760 vs. TAIR 10
Match: AT1G13360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1); Has 69 Blast hits to 69 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.2 bits (178), Expect = 3.1e-13
Identity = 59/181 (32.60%), Postives = 88/181 (48.62%), Query Frame = 0

Query: 62  DLVESEEIQDELLNILEDVDAVAERDESIEGLELDSFIKSFEEEIQALPSAKSAAADQNE 121
           D  E + ++D+L ++L+D       D      +LDS +KSFE+E+  + +  +  +    
Sbjct: 30  DSPEVKRLRDDLFDVLDD------SDPEPVSQDLDSVMKSFEDELSTVTTTTAQGSSTAG 89

Query: 122 SPQVELGYLFGASDDELGLPPRGGLS------TEGKMEAI-DFMPACCSPDVFELEGKLG 181
             Q +LGYL  ASDDELGLPP   +S       E   E + D + A  S D   ++   G
Sbjct: 90  ETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTETVTDLVRA--SSDSSGIDEIWG 149

Query: 182 FGDEIPCYDSFELGMGIGSGAAEENGLGGGEFVALGGLFDYSDVPF--------RPESLS 228
           F D +  Y   + G G+G          GG++VA+ GLF++SD  F        R ESL 
Sbjct: 150 FEDHVSNYGGLDFGSGVGD---------GGDYVAVEGLFEFSDDCFDSGDLFSWRSESLP 193

BLAST of Lsi02G001760 vs. TAIR 10
Match: AT1G13360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). )

HSP 1 Score: 66.2 bits (160), Expect = 3.8e-11
Identity = 51/162 (31.48%), Postives = 79/162 (48.77%), Query Frame = 0

Query: 62  DLVESEEIQDELLNILEDVDAVAERDESIEGLELDSFIKSFEEEIQALPSAKSAAADQNE 121
           D  E + ++D+L ++L+D       D      +LDS +KSFE+E+  + +  +  +    
Sbjct: 30  DSPEVKRLRDDLFDVLDD------SDPEPVSQDLDSVMKSFEDELSTVTTTTAQGSSTAG 89

Query: 122 SPQVELGYLFGASDDELGLPPRGGLS------TEGKMEAI-DFMPACCSPDVFELEGKLG 181
             Q +LGYL  ASDDELGLPP   +S       E   E + D + A  S D   ++   G
Sbjct: 90  ETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTETVTDLVRA--SSDSSGIDEIWG 149

Query: 182 FGDEIPCYDSFELGMGIGSGAAEENGLGGGEFVALGGLFDYS 217
           F D +  Y   + G G+G          GG++VA+ G F Y+
Sbjct: 150 FEDHVSNYGGLDFGSGVGD---------GGDYVAVEGFFYYT 174

BLAST of Lsi02G001760 vs. TAIR 10
Match: AT1G13360.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). )

HSP 1 Score: 63.5 bits (153), Expect = 2.5e-10
Identity = 50/158 (31.65%), Postives = 77/158 (48.73%), Query Frame = 0

Query: 62  DLVESEEIQDELLNILEDVDAVAERDESIEGLELDSFIKSFEEEIQALPSAKSAAADQNE 121
           D  E + ++D+L ++L+D       D      +LDS +KSFE+E+  + +  +  +    
Sbjct: 30  DSPEVKRLRDDLFDVLDD------SDPEPVSQDLDSVMKSFEDELSTVTTTTAQGSSTAG 89

Query: 122 SPQVELGYLFGASDDELGLPPRGGLS------TEGKMEAI-DFMPACCSPDVFELEGKLG 181
             Q +LGYL  ASDDELGLPP   +S       E   E + D + A  S D   ++   G
Sbjct: 90  ETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTETVTDLVRA--SSDSSGIDEIWG 149

Query: 182 FGDEIPCYDSFELGMGIGSGAAEENGLGGGEFVALGGL 213
           F D +  Y   + G G+G          GG++VA+ GL
Sbjct: 150 FEDHVSNYGGLDFGSGVGD---------GGDYVAVEGL 170

BLAST of Lsi02G001760 vs. TAIR 10
Match: AT3G25870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 1.8e-05
Identity = 62/188 (32.98%), Postives = 84/188 (44.68%), Query Frame = 0

Query: 58  LNLDDLVESEEIQDELLNILEDVDAVAERDESIE--GL-----ELDSFIKSFEEEIQALP 117
           L   D V ++ ++D L   L+  D    RD+  +  GL     +LDS +KSFE E+    
Sbjct: 9   LTRTDSVGNKRVRDGL--DLDSPDVKRLRDDLFDDSGLDPVSQDLDSVMKSFENEL---- 68

Query: 118 SAKSAAADQNESPQVELGYLFGASDDELGLPPRGGLSTEGKMEAIDFMPACCSPDVFEL- 177
           S  +AA    E+ Q +LGYLF ASDDELGLPP               +P  C   V EL 
Sbjct: 69  STTTAALSSGET-QPDLGYLFEASDDELGLPP-------PLTPPQTLLPPSCEETVTELV 128

Query: 178 --------EGKL-GFGDEIPCYDSFELGMGIGSGAAEENGLGGGEFVALGGLFDYSDV-P 228
                    G+L GF D +  +   +LG         ++GL    F    G  D  D+  
Sbjct: 129 RASSDSSEVGELCGFEDHVTEFGPCDLG---------DDGL----FEYFDGCLDSGDLFS 169

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LQD51.2e-8980.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042270 PE=4 SV=1[more]
A0A6J1E8113.3e-7975.32uncharacterized protein LOC111431577 OS=Cucurbita moschata OX=3662 GN=LOC1114315... [more]
A0A6J1GR954.0e-7771.62uncharacterized protein LOC111456805 OS=Cucurbita moschata OX=3662 GN=LOC1114568... [more]
A0A6J1K0971.6e-7369.00uncharacterized protein LOC111489916 OS=Cucurbita maxima OX=3661 GN=LOC111489916... [more]
A0A251PC241.5e-3147.45Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G220600 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_038894861.11.0e-9586.96uncharacterized protein LOC120083261 [Benincasa hispida][more]
XP_011660345.12.5e-8980.75uncharacterized protein LOC105436376 [Cucumis sativus] >KGN64115.1 hypothetical ... [more]
KAG6584364.16.1e-8076.19hypothetical protein SDJN03_20296, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7019949.12.3e-7975.76hypothetical protein SDJN02_18916, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022924029.16.8e-7975.32uncharacterized protein LOC111431577 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT1G13360.13.1e-1332.60unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G13360.23.8e-1131.48unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G13360.32.5e-1031.65unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G25870.11.8e-0532.98unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34539T6J4.11 PROTEINcoord: 3..228
NoneNo IPR availablePANTHERPTHR34539:SF15SUBFAMILY NOT NAMEDcoord: 3..228

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G001760.1Lsi02G001760.1mRNA