
Lsi02G001480 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAAAGTTCTAAAAATGTAAATTATATAATAATGGGCTATCCTATTCCAACTTAATTTATATTATAGTATGTGATAATAAAAAGGTTTAATTTATATATTTTGTTTTGGTTTCAGGGCAAATTTTTTTTTTAATGACCAATTAAGTTAATAGAAATGACGAAAGACAACGCAGGCTAATTACTAATTAGTTAACATTTTGAAGAGATTTGGGTTAGTTCAAACTCAAGGTGATGTGGAAATGGCTAATCACAATCGAGCTTGTTTAATTATACTTTAGAAATGCAATGGAGCAGGCCAAATTGGGTTATTATTAGGGCTTTTTAATAACAAACTCGGAATGAAAGACACCCAATTATCGCTTTTTTCGTCTCTTTTTAAAAATAAAGAAATAAGGAACCAATTATCAAATTTTCATTATAAAATCTGCTGACTATATATGACCAATTGCAATATGTTAACTATTTATATTTTATTTAATAATTTTGATGTAATTTTAGTATTTTTTTATTTATATTCTTTTTATGGTATTTTAAGTAGGATTATTTATGTTTTTTATCATGAACTATGATGCATTAGGATTTCTTTTATTGAGAGACTATTTAAAGTTTGACCATTGAGAGACTTTTTTTTTTTTTTTTTAATAACAGAATACTAGAGGGAGGGATCAGGAGGTGCACCGGGACATCTCAACCAGGTTGACACCTCCTTAGCACCCTCATCATGCCTTGATACTAATAGCGATATCATTCATATAACAAAAAGTTTGTACAAAGAGCTAGAGGATAGCTCTGTAACAAGAGGAGGTTGGTCAGGAAAATGGGCTAAAAAAACAATTCCAATTTGGGAATGATAATTTTTCTTTTAAGTTGATGACGTCATCAACTCAACATTTGCAATTCTTGATCTAGGGTTGCATGCGAAAGCATTTAGGTAAGATTGATCAACTTGCTTGTAGCCTTGAGTAGAGAATTAGTTCTCCTTATGTCTTGGATCAAAAGCTAATCTAAATCTAATTCTTCTCTTTAGATTGACATCAAATTGATTTGAGAGTTTTAGAATTTTATATTAAAGAGATAAATGAGTTCCTAATTTTTCGAATCGGTAGGATTTTTCATATCAGAATTTGTGAGACAAGATTGTTGAGATACTTTGTTACAAAATGAAGTGAATCTAAATTAATATGACCAAAGCAGATTCTAGAAAGAAAAAACAAATCTTATTAATTCGAGTCATATTAATATTTAATTGAGATAATCCACGCCAATGTTGACCCATTTTAAAGGAACGGTTAAACCAAAAACATCACCACCCCAACTTTATAATATTCTTATTATTATCTTCCAAACAAAGTTAAATTTATTTAATCGAATATTTTACAATTGAAAGTAATAATTGGTTACTTCTCATTAAAAAGCATATTAATAATCCACATTGAACAACTCGTTTTTGATTTGCCATTTACACATACGACCCTTCCAAAGGGTAATTTAACAAACAAAAATGTCCAAATTACTTTACACTAAGTTAAATTATAAAACTTATAATTTAAACTATCACATGCTATTATATAAACTTAGCAATTTGAGGGAGAGGGAACTCACAATTAATAGTATTACCATTCTCACCTTGAAAATCATGATCATTCTTATTAGAAGAATTATAAGTGCTATCAACAACTTTTTTAGGCTAATTACAAACTTCTTTAACACTTCAATATTATTCCAATCCCAATCCAATGACCTAGAAACGGAACCTCGTCACGAGCCGTTGGGCTCATGGCCGCGAACCGCGGCGGAGATAGTAATGCAGTGGGAAAAATTGATGGTTACATTTTGTGTAGGCTCAGCCATTGCCATAGCCACCGTATCTCTTCAAATTGAAACCAGGCTCTCTTTAATGTTTCATTTTCTGTCAGTTGTGTTAATGGGTTGCTTTGTTTTTATAGCCTCAGCCAAAGTCATTAATGTTAAGCAGCAAAGGGTTTCTCAAATTTTGTATTGTTTTGGTGGGTTTTGGTTTGTTACTGCCTTCTTCATTGCCATTGCCATTCCTTATACATTT ATGGATAAAAAATGCAATGGAGCAGGCCAAATTGGGCTAATTACAAACTTCTTTAACACTTCAATATTATTCCAATCCCAATCCAATGACCTAGAAACGGAACCTCGTCACGAGCCGTTGGGCTCATGGCCGCGAACCGCGGCGGAGATAGTAATGCAGTGGGAAAAATTGATGGTTACATTTTGTGTAGGCTCAGCCATTGCCATAGCCACCGTATCTCTTCAAATTGAAACCAGGCTCTCTTTAATGTTTCATTTTCTGTCAGTTGTGTTAATGGGTTGCTTTGTTTTTATAGCCTCAGCCAAAGTCATTAATGTTAAGCAGCAAAGGGTTTCTCAAATTTTGTATTGTTTTGGTGGGTTTTGGTTTGTTACTGCCTTCTTCATTGCCATTGCCATTCCTTATACATTT ATGGATAAAAAATGCAATGGAGCAGGCCAAATTGGGCTAATTACAAACTTCTTTAACACTTCAATATTATTCCAATCCCAATCCAATGACCTAGAAACGGAACCTCGTCACGAGCCGTTGGGCTCATGGCCGCGAACCGCGGCGGAGATAGTAATGCAGTGGGAAAAATTGATGGTTACATTTTGTGTAGGCTCAGCCATTGCCATAGCCACCGTATCTCTTCAAATTGAAACCAGGCTCTCTTTAATGTTTCATTTTCTGTCAGTTGTGTTAATGGGTTGCTTTGTTTTTATAGCCTCAGCCAAAGTCATTAATGTTAAGCAGCAAAGGGTTTCTCAAATTTTGTATTGTTTTGGTGGGTTTTGGTTTGTTACTGCCTTCTTCATTGCCATTGCCATTCCTTATACATTT MDKKCNGAGQIGLITNFFNTSILFQSQSNDLETEPRHEPLGSWPRTAAEIVMQWEKLMVTFCVGSAIAIATVSLQIETRLSLMFHFLSVVLMGCFVFIASAKVINVKQQRVSQILYCFGGFWFVTAFFIAIAIPYTF Homology
BLAST of Lsi02G001480 vs. ExPASy TrEMBL
Match: A0A0A0LQB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G041520 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 1.1e-13 Identity = 49/90 (54.44%), Postives = 65/90 (72.22%), Query Frame = 0
BLAST of Lsi02G001480 vs. ExPASy TrEMBL
Match: A0A0A0LSX4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G040520 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 3.6e-12 Identity = 42/89 (47.19%), Postives = 62/89 (69.66%), Query Frame = 0
BLAST of Lsi02G001480 vs. ExPASy TrEMBL
Match: A0A0A0LCY2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851175 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 3.9e-11 Identity = 41/88 (46.59%), Postives = 63/88 (71.59%), Query Frame = 0
BLAST of Lsi02G001480 vs. ExPASy TrEMBL
Match: A0A7N2R866 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 3.3e-10 Identity = 37/86 (43.02%), Postives = 58/86 (67.44%), Query Frame = 0
BLAST of Lsi02G001480 vs. ExPASy TrEMBL
Match: A0A7N2M5A3 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 2.4e-08 Identity = 43/106 (40.57%), Postives = 61/106 (57.55%), Query Frame = 0
BLAST of Lsi02G001480 vs. NCBI nr
Match: KAG6584385.1 (hypothetical protein SDJN03_20317, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 120.6 bits (301), Expect = 1.1e-23 Identity = 66/94 (70.21%), Postives = 76/94 (80.85%), Query Frame = 0
BLAST of Lsi02G001480 vs. NCBI nr
Match: KAG6572911.1 (hypothetical protein SDJN03_26798, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 92.8 bits (229), Expect = 2.4e-15 Identity = 51/89 (57.30%), Postives = 66/89 (74.16%), Query Frame = 0
BLAST of Lsi02G001480 vs. NCBI nr
Match: KAE8652531.1 (hypothetical protein Csa_013077, partial [Cucumis sativus]) HSP 1 Score: 81.3 bits (199), Expect = 7.3e-12 Identity = 42/89 (47.19%), Postives = 62/89 (69.66%), Query Frame = 0
BLAST of Lsi02G001480 vs. NCBI nr
Match: KAF3947053.1 (hypothetical protein CMV_026760 [Castanea mollissima]) HSP 1 Score: 66.6 bits (161), Expect = 1.9e-07 Identity = 37/83 (44.58%), Postives = 54/83 (65.06%), Query Frame = 0
BLAST of Lsi02G001480 vs. NCBI nr
Match: KAF3947054.1 (hypothetical protein CMV_026761 [Castanea mollissima]) HSP 1 Score: 66.2 bits (160), Expect = 2.4e-07 Identity = 41/106 (38.68%), Postives = 62/106 (58.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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