Lsi02G001160 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G001160
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like
Location	chr02: 944509 .. 952678 (+)
RNA-Seq Expression	Lsi02G001160
Synteny	Lsi02G001160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTATTTCCGCCGCTCTCTACCACTCTTAAATCTGCTCTCTATTTTAGTTGTTTGTGTCTTCACAAAGACAGACGAAGAAACCTTCCCCTCCACTGGCCTTCATATGTTCTTACTTTCTCATATTTTTCTTCACTAACCTTCTTCTTCAGCTTCCATTTTCTCTCTGTAATGGCTGCTCTGGCTCTCTCATTGCTCCTTCTGGCCGCCATGGCTGGCCACTCAAGTAAGTTGCTCTAGCTTCCCTTCATCTTCTTTCTTGGTTTTTGGGTTTTTTCTTCTTTTTTTTTAGTGTTGATAAAAAGTTAAAATTATAATAATATCAGCTTAAGCCTTTTTGAGTTTGATTCCTGTTTTAATATAGTATGAAAGCAAGAATTAGTTATTTATTCTTCAATTGATACTGAACTTCACACATTAAAAACGTATTTCTAATACATTTTCAAGTGTCTAATTTAAAAAATATGTAATTTTGAAAAAAATTGAACCTTTTGGCAATTATTTAAAATAAATTTTGAAGTGTATTTTAAACCATTTTTTAAAAGAGCTTAAATAAAAATGAATTTTTTGAAAAATACTTTCTTAGACTTATATTTCAAAAATAGAAAAGAAAATGATTGTCAGGTCTAAGCTAATTGATGATATAATATTTTTGAGAGGGTTGATAACAAATAAGGAAGTAAAGGAATTTTGCTTAGTGAATTTTACTTGATGGTTAAAATTATTAGGATAAAACTGATTTTAACCATTTCAATTATCTTTAATCATTTAAGATTAATTTAATATTTTTAAATGTAATTTTTATATCAACAAAATTAGTTTTGAATTAAAAGTAATTTTAACCATTTAAACTTTTTGTGAGATTGATTTTTTTTATTTAGGCAAAGAATGTGGAATGTACGATGATGTTTTGATTACAATACATTTTATTTTTAGTGTTTTACATCTCGTAAAGAACTATGTTTTAAAAATTTTCACCAATGTTACATAATTCCAAATGCTTGATTTGGAATCGAGCTAGCATCAATTAAGATTTCATTCCATGAATCTTAAAGATTAGATATTAAACTTAAAAGATTTTATTTAGAAGAAAAAGAAATGAAAGTTGTTAAAGTTCTATTTAATTTACTGTCGGCCAAAAATTTGGTGGGTACACGTGTCGTGTTTTGAGTAGGTGGGGCATGGTGCGTTTGCAAGGACGGGGTGGGTGACGCGACGCTGCAGAAGGCGCTGGACTACGCGTGCGGGGCAGGGGCTGACTGCAGCCCCATTCGCCAAAATGCAGCCTGTTTCCTTCCAAATACAGTCAGGGCTCACTGTTCTTATGCTGTTAATAGCTATTTCCAGAAGAAAGGCCAAGCTCAAGGCTCCTGTGATTTTGCTGGTGTTGCTACTATCTCTACTACTGACCCTAGTAAGCAACCCAAAACCCTAACCTTTTCTTAATTAATACCCTAATAATTAAAAATTAGTTTCATATTAAAATAATAACAAACAAATAAATAAAAATATTTCTTATTTCTTTCTTTCTCATTTCACTCGCTTTTTGGTAGGTGCTGCTGGCTGTTCCTACCCTTCAAGCGCCGGGTAAGTTGCTTTTCTGGGATCTTTTATTAACATTTTTTAATCTTTGATTCTTTGAAAATAAAAAATTTAACTCTACCACATTTTCCTAAATATAATTTTCGTTCATAACTATTTTGTTTTTTATTTTTTAAAAGTGTTTATTTTCTTTGATTTATACATTAACAATTTTTTTTATATTCATTTTTTAAAATAAAGTAAAGTAAACAAATAAATCAAATTATGATCAATCAAATTGGGTCATATGGTAATTGAGTTCTTAATTTTTCTTTATTTCACGATCGGTTATATGGAGTGGAAATTTAAACCTCTAATTTTCAAAGAAATATATTTAAGTTTTCATCCACTTTTTGTCGGAAAGGAATCTTCTTTATTTTAAGCAACCATATAATTCAACATTCCAATTTTAAAATTTTCAAACTCATCAATCTTCTCAAAGATTCCACATGATCCAAGGGTTGTAACTTTATGGTTTAAATTTTCCACCCCTCCAAATTCCCAACATACAAAGTTTGATACTAATCTCAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCTAAATCCATTTGAACTATCTAAATTTCTCTAGGACTTTGTCTCCGACATTTAAAGTTTATTAAAAATTTTGTTTAGTATAATGTAGAATAAGAGGATTCAAACTGTAAATTTTTGTATCGTTAACAGTAACACACGTATACTTTACGTTAGTTTCAACAAAACTTACATTAAAATTTATTAGAATTACCATTTTTTTCACTATAAAATTAATTAGTAACCACATAATGATAACTGTGATGCAAAAGAAGATGCAATTATTGGGATTCCGTTTCTTTCTCTTTAAAATTGGCATTTGGCAATGCATAAATTAGAGTTTCAACTTCAACATCGTCCAAAAGCACTATCTTCTTGCTTTATTTAATCTTTGACGTAGCCCTAGCTTCCTTTTTTTTTCTTTTGGCTTTTGGTGTAAATTAAATAACATTCTCGTATGGTACTTGATGGTAATGCTCTTCCTTGTCAAAAGTTGCGACTAACCTGAACTTTTGTCCGAGGAGTTTTAAACTCAAAGATTTATGTCTTGCAACTTCCAAATTTGTTTTGCGTTGGTTTTAAATTTTTGAACTTTTAAATTTGTTATATATATTTTATTCCTTAATTTTTAAAATATCTACTTATTTTTTATGATATAATTGAATGACATAGATTTTAGTATGTTTTGTTTGCTAGCATGATTTATAGTCATATGATTTAAAGGCAATCAGTTGACATGTGAATATTAATTAGATGAAAAAAAATAATATAGTAAAGATGACTACCATAATATTTTTTTTCCTCTTAAGTTTAAGGATTATTGTAGATATTTTAAAAGTCTTTGTAAAAAAAATAGGTATTTTTAAAGTTTAGAGATTTAACGTGAACATTTTAAAATTTCAATGACCAAAATATAACAAAGGTTAAATTATTATTACTTTTTAATTTAATACCCTTGTTCTTTCTCAATATATGGGATATTTTACCCAACTTATTTTTTTTTTATAAACATTCAAAGTATAAATCTTTTAGAACTTTGAGCAGAAATTCTAACCTAGAAATGATGGGATAGTGATCTAGATCGGTGTGGCGACCCAAATTTTCATTAGAACCAGATCATTGTCATAACATTTCAAGTTTCAATCCCCATTTGAAATTTTAAGGCCCCAATAACTATTTGGTTTTTAGTTTTTAAAAATTAAACCTACAAACACTCCTACCATTTCTAAATTACTTACTTTGTCATGTACTTTGTATCTATGTTTTAAAAAACCAACCAAATTTTGAAAACTCAAAAATAGTTTTTGAAAACTTGTTTTTGTTTTTAGAAAATGTCTAAAAATGCAACTATTGTACTTAAAAAAAGATGCAAACCATTGTAAGAAAATGTAAGAAAATATGTTTAATTTCCTAAAACAAATCAAAAACAAAAAATAAAATGATTACCAAATGGAATATAATTAATTCACAATTTCAAGGATGCTATTGAAAACCTTTATAAAAGGTCATGAATAATATTGTAACTTTAAGTAAGTGTTTGGAGCAAATAGTAGAATTGTGAAGTTGTAAGCTCCCAACGTAAAAAGTTAATAAAATATATATATTTTTAGTCGTACTGACCCACGAAACTCTTTGGACAAATAAACAACTCCAATTTTTAAACCAAACACCTCTTTAGAAAGTATAGGAATATGTTTTTAAACCAGTAACAAAATTCATGATAATTATTATTATTGTTTTGACAATAAGTTCGTGCTTTTTTCTTTTTCTTTTTTTTTTTTTTTTAAGGAAGTTCATAATATTATTTTGTAACTCAACTTAAAAATAAATTTAAGAAAAAAAAATTATTTAACCCAAATTTAAAGGGAATGGGAAAATTCAAAATCAGATTTTTTTTTAATTTTTTTTAATTTTTTGGTTTCCTTTTGTGTGTGTGGGTTAGCTGGGTTGATCCCAGCGTGATTTCTGGGTGAGTCGTTTGATCTCAAATCTCTGACTGCTTTTTAGGGTTTTGAGCCAACTTTAATTTCTTCTGCTTCTTTCTTGGGGTTCTTGAGGATTGTGCCATTTCTTTTGACTCCATCTGTCCTTTTGCTACTTTTTCTTTCCTTTCACAAACAATGTAATCTAAATCCTAAAAGGTGGCATCCAATAGAGACAGATTTCTAAAATTTTATTGGAACAATTCCCAATTTTTTATACGTCTATCATATTTGTAAGGTTCAATTTTAAACTTTATTCCTTCAACTTTTTAGAGATGGGTTTTTATTAATTCTTTCAACTTTTATTTTTGGATAAAAAAATTATTCTTTCATACTATATTTTATATTTAGTTTTTATTTAGTCTTATATTTTTAATTCTTAAATTTGAGTTTGATTTTAATTTACTCTTTAAGTTTCAAAATGCTGTAATTTTACCTTTAAGATTGAAGTTTTGTTTTACTTGGTTCATAAGTTCGAAAATTTGTATTTGAGATTGTTTGGTAAGTTTTTAAATTATGTTAGACACATATCTTAAGCCATTGAACATTTTTTTTTTTTTTTTTTGAAATCTATAGATAAAATTTGAGTTTGTGTGTTAATAGGACATTGATCTTTCAATTAAAATTAGTAAAAATTGCAACTTGTTTATAATTTGTCAACTCAACATATCACATCGCTTGTTTGTTAGTTAACTCACACTCAAATTAATTCATAAACCATTTAGAAGTAATTTGAAACTTCAAAACTAAATAGACATTGATATCAAACTTTCAAGACTAAAAATGTATTTTATTAAAAAAAAAATTAAAGCATGTTGTTGAAGAGAAATATTACAAGACATTTAAAAAAAACAGTAAATATAAATATAAATGTTTTTTAAAAACAATGATCTATGCATGTTAACAAAAAAACAAAAAAAAAATTCGGATTGTTGGTTTAAAAAAAAAATTGTTATTTATTTATTTATTTAAAAACCTCCTTTTAAAAAAATGTTAAAATTAGAATAAAGGGTGCCAACTTGACCTTAGCTCGTAAATAAAATGTTATCTTTCTTGAAGTCAGAGCTCTCTTCCTGATATTATTAAAAAAAACTATAACTATTTTGGAGAAAATTGTGGTTGATTCTTAAAAACAATATTATTAAAAAAAGTCCTTAAATTATTAATTTTCCTCGACAAGTCATCGTTTGCTTTTTTATTTTCTAAATATGATCGACTTAATTAGTAAACTGGCGATAATATGATGAACATAATACGAATTAATGCTGACTATTAGATGCTATTTCAGTGGCAGCAACGGAGGTGGAGTAACTCCGGTGACGATGACTCCAACACCACCTGGAACGACAACAGTCCCCGGAATGACGTCACCTATCACGAGACCACCACCGTCGACGACCCCCACAACTACAAATAATCCTCTTCCCAACACTGCATCTCCCACTGGAGTTTTGGGCGGCGCAGGCACCGGTGTAAGCCCCACTGTAGCTGGCACCACTACCGACGAGAGCCACGGTGGTTTCCGACTCCAACGTCATATATTCTTTTCCCTCTCAATCGTCATCTTATTTAGCTTCGTGCTTTGCTGGAACTGAATTAATAATAATTAAAGTACTTAATTAGCTAGCTTGTTAAAGAGAGTTCTGAGATTTATGATTCCTCTGTTTCTATTGTGGTTAGTAGTTGATTAATTATCATTTAAATTGCCTTCTTATAAGGTTTTGGATTTTCCTTTTCCATCATATACATTATATATATAAATCATGTCTAGATGAAGGGTTGCATTGGAGTTTTGTAATATATATTTATATGTTATATTTTGAGTGTTCATCTTGAGATATATACTAGAGTAATGATTAATTAATTACTACTATGTGATTAGTTTGTT

mRNA sequence

TTTATTTCCGCCGCTCTCTACCACTCTTAAATCTGCTCTCTATTTTAGTTGTTTGTGTCTTCACAAAGACAGACGAAGAAACCTTCCCCTCCACTGGCCTTCATATGTTCTTACTTTCTCATATTTTTCTTCACTAACCTTCTTCTTCAGCTTCCATTTTCTCTCTGTAATGGCTGCTCTGGCTCTCTCATTGCTCCTTCTGGCCGCCATGGCTGGCCACTCAAGTGGGGCATGGTGCGTTTGCAAGGACGGGGTGGGTGACGCGACGCTGCAGAAGGCGCTGGACTACGCGTGCGGGGCAGGGGCTGACTGCAGCCCCATTCGCCAAAATGCAGCCTGTTTCCTTCCAAATACAGTCAGGGCTCACTGTTCTTATGCTGTTAATAGCTATTTCCAGAAGAAAGGCCAAGCTCAAGGCTCCTGTGATTTTGCTGGTGTTGCTACTATCTCTACTACTGACCCTAGTGCTGCTGGCTGTTCCTACCCTTCAAGCGCCGGTGGCAGCAACGGAGGTGGAGTAACTCCGGTGACGATGACTCCAACACCACCTGGAACGACAACAGTCCCCGGAATGACGTCACCTATCACGAGACCACCACCGTCGACGACCCCCACAACTACAAATAATCCTCTTCCCAACACTGCATCTCCCACTGGAGTTTTGGGCGGCGCAGGCACCGGTGTAAGCCCCACTGTAGCTGGCACCACTACCGACGAGAGCCACGGTGGTTTCCGACTCCAACGTCATATATTCTTTTCCCTCTCAATCGTCATCTTATTTAGCTTCGTGCTTTGCTGGAACTGAATTAATAATAATTAAAGTACTTAATTAGCTAGCTTGTTAAAGAGAGTTCTGAGATTTATGATTCCTCTGTTTCTATTGTGGTTAGTAGTTGATTAATTATCATTTAAATTGCCTTCTTATAAGGTTTTGGATTTTCCTTTTCCATCATATACATTATATATATAAATCATGTCTAGATGAAGGGTTGCATTGGAGTTTTGTAATATATATTTATATGTTATATTTTGAGTGTTCATCTTGAGATATATACTAGAGTAATGATTAATTAATTACTACTATGTGATTAGTTTGTT

Coding sequence (CDS)

ATGGCTGCTCTGGCTCTCTCATTGCTCCTTCTGGCCGCCATGGCTGGCCACTCAAGTGGGGCATGGTGCGTTTGCAAGGACGGGGTGGGTGACGCGACGCTGCAGAAGGCGCTGGACTACGCGTGCGGGGCAGGGGCTGACTGCAGCCCCATTCGCCAAAATGCAGCCTGTTTCCTTCCAAATACAGTCAGGGCTCACTGTTCTTATGCTGTTAATAGCTATTTCCAGAAGAAAGGCCAAGCTCAAGGCTCCTGTGATTTTGCTGGTGTTGCTACTATCTCTACTACTGACCCTAGTGCTGCTGGCTGTTCCTACCCTTCAAGCGCCGGTGGCAGCAACGGAGGTGGAGTAACTCCGGTGACGATGACTCCAACACCACCTGGAACGACAACAGTCCCCGGAATGACGTCACCTATCACGAGACCACCACCGTCGACGACCCCCACAACTACAAATAATCCTCTTCCCAACACTGCATCTCCCACTGGAGTTTTGGGCGGCGCAGGCACCGGTGTAAGCCCCACTGTAGCTGGCACCACTACCGACGAGAGCCACGGTGGTTTCCGACTCCAACGTCATATATTCTTTTCCCTCTCAATCGTCATCTTATTTAGCTTCGTGCTTTGCTGGAACTGA

Protein sequence

MAALALSLLLLAAMAGHSSGAWCVCKDGVGDATLQKALDYACGAGADCSPIRQNAACFLPNTVRAHCSYAVNSYFQKKGQAQGSCDFAGVATISTTDPSAAGCSYPSSAGGSNGGGVTPVTMTPTPPGTTTVPGMTSPITRPPPSTTPTTTNNPLPNTASPTGVLGGAGTGVSPTVAGTTTDESHGGFRLQRHIFFSLSIVILFSFVLCWN

Homology

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BLAST of Lsi02G001160 vs. ExPASy Swiss-Prot
Match: Q9FZ86 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.3e-39
Identity = 102/208 (49.04%), Postives = 126/208 (60.58%), Query Frame = 0


Query: 1   MAALALSLLLLAAMAGHSSGAWCVCKDGVGDATLQKALDYACGAGADCSPIRQNAACFLP 60
           MA   L ++LL AMAGHSSG WCVCK+G+ +A LQK LDYACGAGADC PI Q   CF P
Sbjct: 1   MAVFVLVMILL-AMAGHSSGTWCVCKEGLSEAMLQKTLDYACGAGADCGPIHQTGPCFNP 60

Query: 61  NTVRAHCSYAVNSYFQKKGQAQGSCDFAGVATISTTDPSAAGCSYPSSAGGSNGGGVTPV 120
           NTV++HCSYAVNS+FQKKGQ+ G+CDFAG AT S +DPS   C +P+SA GS        
Sbjct: 61  NTVKSHCSYAVNSFFQKKGQSLGTCDFAGTATFSASDPSYTTCPFPASASGS-------- 120

Query: 121 TMTPTPPGTTTVPGMTSPITRPPPSTTPTTTNNPLPNTASPTGVLGGAGTGVSPTVAGTT 180
                        G T+P+T  P +  PTTTN   P T +P+    G G G+   +    
Sbjct: 121 -------------GTTTPVTTTPSTRVPTTTNT-RPYTITPS---TGGGLGIPSGINPDY 178

Query: 181 TDESHGGFRLQRHIFFSLSIVILFSFVL 209
           TD S  GF+LQ   F     ++LF+  L
Sbjct: 181 TDPSF-GFKLQSPRF---GFIVLFTLFL 178

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BLAST of Lsi02G001160 vs. ExPASy Swiss-Prot
Match: Q9SD84 (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2 PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 6.2e-37
Identity = 96/179 (53.63%), Postives = 116/179 (64.80%), Query Frame = 0


Query: 1   MAALALSLLLLAAMAGHSSGAWCVCKDGVGDATLQKALDYACGAGADCSPIRQNAACFLP 60
           MA L L LL L  MAGH+S +WCVCK G+ D+ LQK LDYACG GADC+P     +CF P
Sbjct: 1   MAPLVLYLLTL-LMAGHTSASWCVCKTGLSDSVLQKTLDYACGNGADCNPTHPKGSCFNP 60

Query: 61  NTVRAHCSYAVNSYFQKKGQAQGSCDFAGVATISTTDPSAAGCSYPSSAGGSNGGGVTPV 120
           + VRAHC+YAVNS+FQKKGQA  SC+F G AT++TTDPS  GC++PSSA GS+G G T V
Sbjct: 61  DNVRAHCNYAVNSFFQKKGQASESCNFTGTATLTTTDPSYTGCAFPSSASGSSGSGSTTV 120

Query: 121 TMTPTPPGTTTVPGMTSPITRPPPSTTPTTTNNPLPNTASPTGVLGG-----AGTGVSP 175
           T     PG  +  G  S  T P         N+P   T S TG+LGG      GTG++P
Sbjct: 121 T-----PGKNSPKGSNSITTFP-------GGNSPYSGTPS-TGLLGGNITDATGTGLNP 165

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BLAST of Lsi02G001160 vs. ExPASy Swiss-Prot
Match: Q9FNQ2 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1 PE=1 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 8.1e-37
Identity = 99/213 (46.48%), Postives = 129/213 (60.56%), Query Frame = 0


Query: 1   MAALALSLLLLAAMAGHSSGAWCVCKDGVGDATLQKALDYACGAGADCSPIRQNAACFLP 60
           MAAL LSLLLL ++AGHSS +WCVCK G+ D  LQ  LDYACG GADC+P +   +CF P
Sbjct: 1   MAALVLSLLLL-SLAGHSSASWCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNP 60

Query: 61  NTVRAHCSYAVNSYFQKKGQAQGSCDFAGVATISTTDPSAAGCSYPSSAGGSNGGGVTPV 120
           + VR+HC+YAVNS+FQKKGQ+ GSC+F G AT + +DPS  GC++P+SA GS+G      
Sbjct: 61  DNVRSHCNYAVNSFFQKKGQSPGSCNFDGTATPTNSDPSYTGCAFPTSASGSSG------ 120

Query: 121 TMTPTPPGTTTVPGMTSPITRPPPSTTPTTTNNPLPNTASPT-GVLGG------AGTGVS 180
                   TT  PG T+P   P  +T P +  N  P + +PT GV GG       GTG++
Sbjct: 121 -------STTVTPGTTNPKGSPTTTTLPGSGTNS-PYSGNPTNGVFGGNSTGGTTGTGIN 180

Query: 181 PTVAGTTTDESHGGFRLQRHIFFSLSIVILFSF 207
           P     TTD S    +    +F  L ++    F
Sbjct: 181 PDY---TTDSSAFALKNSSKLFICLLLIASSGF 195

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BLAST of Lsi02G001160 vs. ExPASy Swiss-Prot
Match: Q93V72 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4 OS=Arabidopsis thaliana OX=3702 GN=PDCB4 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 7.8e-24
Identity = 84/192 (43.75%), Postives = 112/192 (58.33%), Query Frame = 0


Query: 3   ALALSLLLLAAMAGHSSGAWCVCKDGVGDATLQKALDYACGAGADCSPIRQNAACFLPNT 62
           ++ L L L+ +M  +S+ A+C+CK+G  +  LQKA+DYACG GADC+ I+   AC+ PNT
Sbjct: 2   SVLLPLCLIISMFTYSNAAYCLCKEG-NEQVLQKAIDYACGNGADCTQIQPTGACYQPNT 61

Query: 63  VRAHCSYAVNSYFQKKGQAQGSCDFAGVATISTTDPS-AAGCSYPSSAGGSNGGGVTPVT 122
           V+ HC  AVNSY+QKK  +  +CDF G A+ STT PS A+ C   SS+ G+   G TP T
Sbjct: 62  VKNHCDVAVNSYYQKKASSGATCDFNGAASPSTTPPSTASNCLTGSSSSGTPTTG-TPTT 121

Query: 123 MTPTP-PGTTTVPGMTSPITRPPPSTTPTT--TNNPLPNTASPTGVLGGAG---TGVSPT 182
            TPT    TT  P   +P T  P S TPT+   N   PNT + TG+    G   +  S  
Sbjct: 122 GTPTSGTPTTGTPTTGTPTTGTPTSGTPTSGFPNTGTPNTGTNTGMPNSNGMPTSSSSSV 181

Query: 183 VAGTTTDESHGG 188
             GTT   +  G
Sbjct: 182 FPGTTLGPTGSG 191

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BLAST of Lsi02G001160 vs. ExPASy Swiss-Prot
Match: Q9FZD0 (Carbohydrate-binding X8 domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=At1g26450 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 8.1e-21
Identity = 76/189 (40.21%), Postives = 102/189 (53.97%), Query Frame = 0


Query: 3   ALALSLLLLAAMAGHSSGAWCVCKDGVGDATLQKALDYACGAGADCSPIRQNAACFLPNT 62
           A+ L L LL+ M  +S+ A CVCKD   +  LQK +D+ACG GADC+ I+   AC+ PNT
Sbjct: 2   AVLLPLFLLSFMFTYSNAAVCVCKD-ANELDLQKVIDFACGGGADCAQIQTTGACYQPNT 61

Query: 63  VRAHCSYAVNSYFQKKGQAQGSCDFAGVATISTTDPSAAGCSYPSSAGGSNGGGVTPVTM 122
           ++ HC  AVNSY+QKK     +CDF G A IST+ PS       SS+  SNG   TP   
Sbjct: 62  LKNHCDVAVNSYYQKKASTGATCDFNGAAVISTSPPSTTSSCLSSSS--SNG---TPTAG 121

Query: 123 TP-TPPGTTTVPGMTSPITRPPPSTTPTTTNNPLPNTASPTGVLGGAGTGVSPTVAGTTT 182
            P T   TT  PG T+P       +T  +TN+ LP    PT          +   + +T+
Sbjct: 122 YPSTGNSTTASPGTTNP-------STGNSTNSTLPTNDKPTSSTITFPDSTTMGPSSSTS 177

Query: 183 DESHGGFRL 191
            + +GG  L
Sbjct: 182 GDPNGGEEL 177

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BLAST of Lsi02G001160 vs. ExPASy TrEMBL
Match: K8DWB8 (Glucan endo-1,3-beta-glucosidase-like protein OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.1e-92
Identity = 187/209 (89.47%), Postives = 194/209 (92.82%), Query Frame = 0


Query: 1   MAALALSLLLLAAMAGHSSGAWCVCKDGVGDATLQKALDYACGAGADCSPIRQNAACFLP 60
           MA L LSLLLLAAMAGHSS  WCVCK+GV DATLQKALDYACGAGADCS IRQNAACFLP
Sbjct: 1   MAFLHLSLLLLAAMAGHSSATWCVCKNGVSDATLQKALDYACGAGADCSLIRQNAACFLP 60

Query: 61  NTVRAHCSYAVNSYFQKKGQAQGSCDFAGVATISTTDPSAAGCSYPSSAGGSNGGGVTPV 120
           NTVRAHCSYAVNSYFQKKGQAQGSCDFAGVA ISTTDPSAAGCSYPSSAGG NGGGVTPV
Sbjct: 61  NTVRAHCSYAVNSYFQKKGQAQGSCDFAGVAAISTTDPSAAGCSYPSSAGG-NGGGVTPV 120

Query: 121 TMTPTPPGTTTVPGMTSPITRPPPST-TPTTTNNPLPNTASPTGVLGGAGTGVSPTVAGT 180
           T TPTPPG TTVPGMTSP+TRPPPS+ TPTTTNNPLPNTASPTGVLGGAGTGV+PT  GT
Sbjct: 121 TTTPTPPGATTVPGMTSPVTRPPPSSMTPTTTNNPLPNTASPTGVLGGAGTGVNPTGTGT 180

Query: 181 TTDESHGGFRLQRHIFFSLSIVILFSFVL 209
           T DESHGG RLQRHIFFS+SIV+LFSF+L
Sbjct: 181 TADESHGGIRLQRHIFFSISIVLLFSFLL 208

[Close]

BLAST of Lsi02G001160 vs. ExPASy TrEMBL
Match: A0A1S3BM94 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491323 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 4.1e-92
Identity = 188/214 (87.85%), Postives = 195/214 (91.12%), Query Frame = 0


Query: 1   MAALALSLLLLAAMAGHSSGAWCVCKDGVGDATLQKALDYACGAGADCSPIRQNAACFLP 60
           M  L LSLLLLAAMAGHSS  WCVCK+GV DATLQKALDYACGAGADCSPIRQNAACFLP
Sbjct: 1   MTFLHLSLLLLAAMAGHSSATWCVCKNGVSDATLQKALDYACGAGADCSPIRQNAACFLP 60

Query: 61  NTVRAHCSYAVNSYFQKKGQAQGSCDFAGVATISTTDPSAAGCSYPSSAGGSNGGGVTPV 120
           NTVRAHCSYAVNSYFQKKGQ QGSCDFAGVATISTTDPSAAGCSYPSSAGG NGGGVTPV
Sbjct: 61  NTVRAHCSYAVNSYFQKKGQTQGSCDFAGVATISTTDPSAAGCSYPSSAGG-NGGGVTPV 120

Query: 121 TMTPTPPGTTTVPGMTSPITRPPPST-TPTTTNNPLPNTASPTGVLGGAGT-GVSPTVAG 180
           T TPTPPG TTVPGMTSP+TRPPPS+ TP  TNNPLPNTASPTGVLGGAGT GV+PT  G
Sbjct: 121 TTTPTPPGATTVPGMTSPVTRPPPSSMTPAATNNPLPNTASPTGVLGGAGTGGVNPTGTG 180

Query: 181 TTTDESHGGFRLQRHIFFSLSIVILFSFVL-CWN 212
           TTTDESHGG RLQR IFFS+SIV+LFSFVL CW+
Sbjct: 181 TTTDESHGGIRLQRRIFFSISIVVLFSFVLICWD 213

[Close]

BLAST of Lsi02G001160 vs. ExPASy TrEMBL
Match: A0A1S3BLH0 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491323 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 5.9e-91
Identity = 187/217 (86.18%), Postives = 194/217 (89.40%), Query Frame = 0


Query: 1   MAALALSLLLLAAMAGHSSGAWCVCKDGVGDATLQKALDYACGAGADCSPIRQNAACFLP 60
           M  L LSLLLLAAMAGHSS  WCVCK+GV DATLQKALDYACGAGADCSPIRQNAACFLP
Sbjct: 1   MTFLHLSLLLLAAMAGHSSATWCVCKNGVSDATLQKALDYACGAGADCSPIRQNAACFLP 60

Query: 61  NTVRAHCSYAVNSYFQKKGQAQGSCDFAGVATISTTDPSAAGCSYPSSAG---GSNGGGV 120
           NTVRAHCSYAVNSYFQKKGQ QGSCDFAGVATISTTDPSAAGCSYPSSAG     NGGGV
Sbjct: 61  NTVRAHCSYAVNSYFQKKGQTQGSCDFAGVATISTTDPSAAGCSYPSSAGCYFRGNGGGV 120

Query: 121 TPVTMTPTPPGTTTVPGMTSPITRPPPST-TPTTTNNPLPNTASPTGVLGGAGT-GVSPT 180
           TPVT TPTPPG TTVPGMTSP+TRPPPS+ TP  TNNPLPNTASPTGVLGGAGT GV+PT
Sbjct: 121 TPVTTTPTPPGATTVPGMTSPVTRPPPSSMTPAATNNPLPNTASPTGVLGGAGTGGVNPT 180

Query: 181 VAGTTTDESHGGFRLQRHIFFSLSIVILFSFVL-CWN 212
             GTTTDESHGG RLQR IFFS+SIV+LFSFVL CW+
Sbjct: 181 GTGTTTDESHGGIRLQRRIFFSISIVVLFSFVLICWD 217

[Close]

BLAST of Lsi02G001160 vs. ExPASy TrEMBL
Match: A0A6J1GT57 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456882 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.5e-89
Identity = 180/209 (86.12%), Postives = 189/209 (90.43%), Query Frame = 0


Query: 4   LALSLLLLAAMAGHSSGAWCVCKDGVGDATLQKALDYACGAGADCSPIRQNAACFLPNTV 63
           LALS+LLLAAMAGHSSG WCVCKDGVGD TLQKALDYACGAGADC+PIRQNAACFLPNTV
Sbjct: 5   LALSVLLLAAMAGHSSGTWCVCKDGVGDTTLQKALDYACGAGADCNPIRQNAACFLPNTV 64

Query: 64  RAHCSYAVNSYFQKKGQAQGSCDFAGVATISTTDPSAAGCSYPSSAGGSNGGGVTPVTMT 123
           RAHCSYAVNSYFQKKGQ QGSCDF GVATISTTDPSA+GCSYPS+AGG  GGG TPVTMT
Sbjct: 65  RAHCSYAVNSYFQKKGQTQGSCDFGGVATISTTDPSASGCSYPSTAGG--GGGSTPVTMT 124

Query: 124 PTPPGTTTVPGMTSPITRPPPSTTPTTTNNPLPNTASPTGVLGGAGTGVSPTVAG-TTTD 183
           PTPPGTTTVPGMTSP+ R PP+   TTT NPLPNTASPTGVLGGAGTGVSPT AG TTTD
Sbjct: 125 PTPPGTTTVPGMTSPVARSPPT---TTTTNPLPNTASPTGVLGGAGTGVSPTGAGTTTTD 184

Query: 184 ESHGGFRLQRHIFFSLSIVILFSFVLCWN 212
           ES GGFRLQRHIFFS S V LFSF++ W+
Sbjct: 185 ESDGGFRLQRHIFFSFSTVFLFSFMVWWD 208

[Close]

BLAST of Lsi02G001160 vs. ExPASy TrEMBL
Match: A0A6J1GTR9 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456882 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 5.5e-89
Identity = 180/211 (85.31%), Postives = 189/211 (89.57%), Query Frame = 0


Query: 4   LALSLLLLAAMAGHSSGAWCVCKDGVGDATLQKALDYACGAGADCSPIRQNAACFLPNTV 63
           LALS+LLLAAMAGHSSG WCVCKDGVGD TLQKALDYACGAGADC+PIRQNAACFLPNTV
Sbjct: 5   LALSVLLLAAMAGHSSGTWCVCKDGVGDTTLQKALDYACGAGADCNPIRQNAACFLPNTV 64

Query: 64  RAHCSYAVNSYFQKKGQAQGSCDFAGVATISTTDPSAAGCSYPSSAG--GSNGGGVTPVT 123
           RAHCSYAVNSYFQKKGQ QGSCDF GVATISTTDPSA+GCSYPS+AG   S GGG TPVT
Sbjct: 65  RAHCSYAVNSYFQKKGQTQGSCDFGGVATISTTDPSASGCSYPSTAGCYSSGGGGSTPVT 124

Query: 124 MTPTPPGTTTVPGMTSPITRPPPSTTPTTTNNPLPNTASPTGVLGGAGTGVSPTVAG-TT 183
           MTPTPPGTTTVPGMTSP+ R PP+   TTT NPLPNTASPTGVLGGAGTGVSPT AG TT
Sbjct: 125 MTPTPPGTTTVPGMTSPVARSPPT---TTTTNPLPNTASPTGVLGGAGTGVSPTGAGTTT 184

Query: 184 TDESHGGFRLQRHIFFSLSIVILFSFVLCWN 212
           TDES GGFRLQRHIFFS S V LFSF++ W+
Sbjct: 185 TDESDGGFRLQRHIFFSFSTVFLFSFMVWWD 212

[Close]

BLAST of Lsi02G001160 vs. NCBI nr
Match: XP_038895513.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like isoform X2 [Benincasa hispida])

HSP 1 Score: 364.4 bits (934), Expect = 6.7e-97
Identity = 189/213 (88.73%), Postives = 198/213 (92.96%), Query Frame = 0


Query: 1   MAALALSLLLLAAMAGHSSGAWCVCKDGVGDATLQKALDYACGAGADCSPIRQNAACFLP 60
           MAALALSLLLLAAMAG SSG WC+CK+G+ DATLQKALDYACGAGADCSPIRQNAACF P
Sbjct: 1   MAALALSLLLLAAMAGLSSGTWCICKNGISDATLQKALDYACGAGADCSPIRQNAACFQP 60

Query: 61  NTVRAHCSYAVNSYFQKKGQAQGSCDFAGVATISTTDPSAAGCSYPSSA--GGSNGGGVT 120
           NTVRAHCSYAVNSYFQKKGQ QGSCDFAGVATISTTDPSAAGCSYPSSA  GG NGGGVT
Sbjct: 61  NTVRAHCSYAVNSYFQKKGQTQGSCDFAGVATISTTDPSAAGCSYPSSAGGGGGNGGGVT 120

Query: 121 PVTMTPTPPGTTTVPGMTSPITRPPPSTTPTTTNNPLPNTASPTGVLGGAGTGVSPTVAG 180
           PVT TPT PGTTTVPGMTSP+ RPPPS TPTTTNNPLPNTASPTGVLGGAGTGV+PT AG
Sbjct: 121 PVTTTPTSPGTTTVPGMTSPVARPPPSMTPTTTNNPLPNTASPTGVLGGAGTGVNPTGAG 180

Query: 181 TTTDESHGGFRLQRHIFFSLSIVILFSFVLCWN 212
           TTTDESHGGFRLQ HIFFSLS++I FSF+LCW+
Sbjct: 181 TTTDESHGGFRLQSHIFFSLSVIIFFSFMLCWD 213

[Close]

BLAST of Lsi02G001160 vs. NCBI nr
Match: XP_038895511.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like isoform X1 [Benincasa hispida])

HSP 1 Score: 362.8 bits (930), Expect = 1.9e-96
Identity = 189/217 (87.10%), Postives = 198/217 (91.24%), Query Frame = 0


Query: 1   MAALALSLLLLAAMAGHSSGAWCVCKDGVGDATLQKALDYACGAGADCSPIRQNAACFLP 60
           MAALALSLLLLAAMAG SSG WC+CK+G+ DATLQKALDYACGAGADCSPIRQNAACF P
Sbjct: 1   MAALALSLLLLAAMAGLSSGTWCICKNGISDATLQKALDYACGAGADCSPIRQNAACFQP 60

Query: 61  NTVRAHCSYAVNSYFQKKGQAQGSCDFAGVATISTTDPSAAGCSYPSSA------GGSNG 120
           NTVRAHCSYAVNSYFQKKGQ QGSCDFAGVATISTTDPSAAGCSYPSSA      GG NG
Sbjct: 61  NTVRAHCSYAVNSYFQKKGQTQGSCDFAGVATISTTDPSAAGCSYPSSAGCYFSGGGGNG 120

Query: 121 GGVTPVTMTPTPPGTTTVPGMTSPITRPPPSTTPTTTNNPLPNTASPTGVLGGAGTGVSP 180
           GGVTPVT TPT PGTTTVPGMTSP+ RPPPS TPTTTNNPLPNTASPTGVLGGAGTGV+P
Sbjct: 121 GGVTPVTTTPTSPGTTTVPGMTSPVARPPPSMTPTTTNNPLPNTASPTGVLGGAGTGVNP 180

Query: 181 TVAGTTTDESHGGFRLQRHIFFSLSIVILFSFVLCWN 212
           T AGTTTDESHGGFRLQ HIFFSLS++I FSF+LCW+
Sbjct: 181 TGAGTTTDESHGGFRLQSHIFFSLSVIIFFSFMLCWD 217

[Close]

BLAST of Lsi02G001160 vs. NCBI nr
Match: NP_001292647.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like precursor [Cucumis sativus] >CCM43977.1 glucan endo-1,3-beta-glucosidase-like protein [Cucumis sativus])

HSP 1 Score: 349.4 bits (895), Expect = 2.2e-92
Identity = 187/209 (89.47%), Postives = 194/209 (92.82%), Query Frame = 0


Query: 1   MAALALSLLLLAAMAGHSSGAWCVCKDGVGDATLQKALDYACGAGADCSPIRQNAACFLP 60
           MA L LSLLLLAAMAGHSS  WCVCK+GV DATLQKALDYACGAGADCS IRQNAACFLP
Sbjct: 1   MAFLHLSLLLLAAMAGHSSATWCVCKNGVSDATLQKALDYACGAGADCSLIRQNAACFLP 60

Query: 61  NTVRAHCSYAVNSYFQKKGQAQGSCDFAGVATISTTDPSAAGCSYPSSAGGSNGGGVTPV 120
           NTVRAHCSYAVNSYFQKKGQAQGSCDFAGVA ISTTDPSAAGCSYPSSAGG NGGGVTPV
Sbjct: 61  NTVRAHCSYAVNSYFQKKGQAQGSCDFAGVAAISTTDPSAAGCSYPSSAGG-NGGGVTPV 120

Query: 121 TMTPTPPGTTTVPGMTSPITRPPPST-TPTTTNNPLPNTASPTGVLGGAGTGVSPTVAGT 180
           T TPTPPG TTVPGMTSP+TRPPPS+ TPTTTNNPLPNTASPTGVLGGAGTGV+PT  GT
Sbjct: 121 TTTPTPPGATTVPGMTSPVTRPPPSSMTPTTTNNPLPNTASPTGVLGGAGTGVNPTGTGT 180

Query: 181 TTDESHGGFRLQRHIFFSLSIVILFSFVL 209
           T DESHGG RLQRHIFFS+SIV+LFSF+L
Sbjct: 181 TADESHGGIRLQRHIFFSISIVLLFSFLL 208

[Close]

BLAST of Lsi02G001160 vs. NCBI nr
Match: KAE8652524.1 (hypothetical protein Csa_013819 [Cucumis sativus])

HSP 1 Score: 347.8 bits (891), Expect = 6.5e-92
Identity = 186/209 (89.00%), Postives = 193/209 (92.34%), Query Frame = 0


Query: 1   MAALALSLLLLAAMAGHSSGAWCVCKDGVGDATLQKALDYACGAGADCSPIRQNAACFLP 60
           MA L LSLLLLAAMAGHSS  WCVCK+GV DATLQKALDYACGAGADCS IRQNAACFLP
Sbjct: 1   MAFLHLSLLLLAAMAGHSSATWCVCKNGVSDATLQKALDYACGAGADCSLIRQNAACFLP 60

Query: 61  NTVRAHCSYAVNSYFQKKGQAQGSCDFAGVATISTTDPSAAGCSYPSSAGGSNGGGVTPV 120
           NTVRAHCSYAVNSYFQKKGQ QGSCDFAGVA ISTTDPSAAGCSYPSSAGG NGGGVTPV
Sbjct: 61  NTVRAHCSYAVNSYFQKKGQTQGSCDFAGVAAISTTDPSAAGCSYPSSAGG-NGGGVTPV 120

Query: 121 TMTPTPPGTTTVPGMTSPITRPPPST-TPTTTNNPLPNTASPTGVLGGAGTGVSPTVAGT 180
           T TPTPPG TTVPGMTSP+TRPPPS+ TPTTTNNPLPNTASPTGVLGGAGTGV+PT  GT
Sbjct: 121 TTTPTPPGATTVPGMTSPVTRPPPSSMTPTTTNNPLPNTASPTGVLGGAGTGVNPTGTGT 180

Query: 181 TTDESHGGFRLQRHIFFSLSIVILFSFVL 209
           T DESHGG RLQRHIFFS+SIV+LFSF+L
Sbjct: 181 TADESHGGIRLQRHIFFSISIVLLFSFLL 208

[Close]

BLAST of Lsi02G001160 vs. NCBI nr
Match: XP_008449549.1 (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like isoform X2 [Cucumis melo])

HSP 1 Score: 347.4 bits (890), Expect = 8.5e-92
Identity = 188/214 (87.85%), Postives = 195/214 (91.12%), Query Frame = 0


Query: 1   MAALALSLLLLAAMAGHSSGAWCVCKDGVGDATLQKALDYACGAGADCSPIRQNAACFLP 60
           M  L LSLLLLAAMAGHSS  WCVCK+GV DATLQKALDYACGAGADCSPIRQNAACFLP
Sbjct: 1   MTFLHLSLLLLAAMAGHSSATWCVCKNGVSDATLQKALDYACGAGADCSPIRQNAACFLP 60

Query: 61  NTVRAHCSYAVNSYFQKKGQAQGSCDFAGVATISTTDPSAAGCSYPSSAGGSNGGGVTPV 120
           NTVRAHCSYAVNSYFQKKGQ QGSCDFAGVATISTTDPSAAGCSYPSSAGG NGGGVTPV
Sbjct: 61  NTVRAHCSYAVNSYFQKKGQTQGSCDFAGVATISTTDPSAAGCSYPSSAGG-NGGGVTPV 120

Query: 121 TMTPTPPGTTTVPGMTSPITRPPPST-TPTTTNNPLPNTASPTGVLGGAGT-GVSPTVAG 180
           T TPTPPG TTVPGMTSP+TRPPPS+ TP  TNNPLPNTASPTGVLGGAGT GV+PT  G
Sbjct: 121 TTTPTPPGATTVPGMTSPVTRPPPSSMTPAATNNPLPNTASPTGVLGGAGTGGVNPTGTG 180

Query: 181 TTTDESHGGFRLQRHIFFSLSIVILFSFVL-CWN 212
           TTTDESHGG RLQR IFFS+SIV+LFSFVL CW+
Sbjct: 181 TTTDESHGGIRLQRRIFFSISIVVLFSFVLICWD 213

[Close]

BLAST of Lsi02G001160 vs. TAIR 10
Match: AT1G18650.1 (plasmodesmata callose-binding protein 3 )

HSP 1 Score: 163.7 bits (413), Expect = 1.6e-40
Identity = 102/208 (49.04%), Postives = 126/208 (60.58%), Query Frame = 0


Query: 1   MAALALSLLLLAAMAGHSSGAWCVCKDGVGDATLQKALDYACGAGADCSPIRQNAACFLP 60
           MA   L ++LL AMAGHSSG WCVCK+G+ +A LQK LDYACGAGADC PI Q   CF P
Sbjct: 1   MAVFVLVMILL-AMAGHSSGTWCVCKEGLSEAMLQKTLDYACGAGADCGPIHQTGPCFNP 60

Query: 61  NTVRAHCSYAVNSYFQKKGQAQGSCDFAGVATISTTDPSAAGCSYPSSAGGSNGGGVTPV 120
           NTV++HCSYAVNS+FQKKGQ+ G+CDFAG AT S +DPS   C +P+SA GS        
Sbjct: 61  NTVKSHCSYAVNSFFQKKGQSLGTCDFAGTATFSASDPSYTTCPFPASASGS-------- 120

Query: 121 TMTPTPPGTTTVPGMTSPITRPPPSTTPTTTNNPLPNTASPTGVLGGAGTGVSPTVAGTT 180
                        G T+P+T  P +  PTTTN   P T +P+    G G G+   +    
Sbjct: 121 -------------GTTTPVTTTPSTRVPTTTNT-RPYTITPS---TGGGLGIPSGINPDY 178

Query: 181 TDESHGGFRLQRHIFFSLSIVILFSFVL 209
           TD S  GF+LQ   F     ++LF+  L
Sbjct: 181 TDPSF-GFKLQSPRF---GFIVLFTLFL 178

[Close]

BLAST of Lsi02G001160 vs. TAIR 10
Match: AT5G08000.1 (glucan endo-1,3-beta-glucosidase-like protein 3 )

HSP 1 Score: 155.6 bits (392), Expect = 4.4e-38
Identity = 96/179 (53.63%), Postives = 116/179 (64.80%), Query Frame = 0


Query: 1   MAALALSLLLLAAMAGHSSGAWCVCKDGVGDATLQKALDYACGAGADCSPIRQNAACFLP 60
           MA L L LL L  MAGH+S +WCVCK G+ D+ LQK LDYACG GADC+P     +CF P
Sbjct: 1   MAPLVLYLLTL-LMAGHTSASWCVCKTGLSDSVLQKTLDYACGNGADCNPTHPKGSCFNP 60

Query: 61  NTVRAHCSYAVNSYFQKKGQAQGSCDFAGVATISTTDPSAAGCSYPSSAGGSNGGGVTPV 120
           + VRAHC+YAVNS+FQKKGQA  SC+F G AT++TTDPS  GC++PSSA GS+G G T V
Sbjct: 61  DNVRAHCNYAVNSFFQKKGQASESCNFTGTATLTTTDPSYTGCAFPSSASGSSGSGSTTV 120

Query: 121 TMTPTPPGTTTVPGMTSPITRPPPSTTPTTTNNPLPNTASPTGVLGG-----AGTGVSP 175
           T     PG  +  G  S  T P         N+P   T S TG+LGG      GTG++P
Sbjct: 121 T-----PGKNSPKGSNSITTFP-------GGNSPYSGTPS-TGLLGGNITDATGTGLNP 165

[Close]

BLAST of Lsi02G001160 vs. TAIR 10
Match: AT5G61130.1 (plasmodesmata callose-binding protein 1 )

HSP 1 Score: 155.2 bits (391), Expect = 5.7e-38
Identity = 99/213 (46.48%), Postives = 129/213 (60.56%), Query Frame = 0


Query: 1   MAALALSLLLLAAMAGHSSGAWCVCKDGVGDATLQKALDYACGAGADCSPIRQNAACFLP 60
           MAAL LSLLLL ++AGHSS +WCVCK G+ D  LQ  LDYACG GADC+P +   +CF P
Sbjct: 1   MAALVLSLLLL-SLAGHSSASWCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNP 60

Query: 61  NTVRAHCSYAVNSYFQKKGQAQGSCDFAGVATISTTDPSAAGCSYPSSAGGSNGGGVTPV 120
           + VR+HC+YAVNS+FQKKGQ+ GSC+F G AT + +DPS  GC++P+SA GS+G      
Sbjct: 61  DNVRSHCNYAVNSFFQKKGQSPGSCNFDGTATPTNSDPSYTGCAFPTSASGSSG------ 120

Query: 121 TMTPTPPGTTTVPGMTSPITRPPPSTTPTTTNNPLPNTASPT-GVLGG------AGTGVS 180
                   TT  PG T+P   P  +T P +  N  P + +PT GV GG       GTG++
Sbjct: 121 -------STTVTPGTTNPKGSPTTTTLPGSGTNS-PYSGNPTNGVFGGNSTGGTTGTGIN 180

Query: 181 PTVAGTTTDESHGGFRLQRHIFFSLSIVILFSF 207
           P     TTD S    +    +F  L ++    F
Sbjct: 181 PDY---TTDSSAFALKNSSKLFICLLLIASSGF 195

[Close]

BLAST of Lsi02G001160 vs. TAIR 10
Match: AT2G03505.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 123.6 bits (309), Expect = 1.9e-28
Identity = 74/161 (45.96%), Postives = 99/161 (61.49%), Query Frame = 0


Query: 4   LALSLLLLAAMAGHSSGAWCVCKDGVGDATLQKALDYACGAGADCSPIRQNAACFLPNTV 63
           L LSLL L A+  +SS  +C+C+DGVG+  LQ ++DYACG   DC+PI +   C+ PNT+
Sbjct: 3   LLLSLLFLLALTTYSSATYCLCRDGVGEKDLQTSIDYACGVLKDCNPIHEKGPCYQPNTI 62

Query: 64  RAHCSYAVNSYFQKKGQAQGSCDFAGVATISTTDPS--AAGCSYPSSAGGSNGGGVTPVT 123
           ++HC +AVN+YFQ+ GQ  GSC+F+G AT S   PS    GC YPSS G +   G TP T
Sbjct: 63  KSHCDWAVNTYFQRFGQISGSCNFSGTATTSQNLPSTVVTGCLYPSSPGSA---GTTPTT 122

Query: 124 MTPTPPGTTTVPGMTSPITRPPPSTTPTTTNNPLPNTASPT 163
            TP+  GT T PG        PP+  P    +P  N  +P+
Sbjct: 123 GTPS--GTQTFPG--------PPAFGPAGDFDPSGNNGAPS 150

[Close]

BLAST of Lsi02G001160 vs. TAIR 10
Match: AT4G13600.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 123.6 bits (309), Expect = 1.9e-28
Identity = 89/207 (43.00%), Postives = 111/207 (53.62%), Query Frame = 0


Query: 3   ALALSLL--LLAAMAGHSSGAWCVCKDGVGDATLQKALDYACGAGADCSPIRQNAACFLP 62
           AL L  L  LL  +   S+  WCV +  V    LQ ALDYAC AGADC+PI+ N  CFLP
Sbjct: 40  ALCLQTLSFLLLLLFRSSAAMWCVARFDVTSQALQAALDYACAAGADCAPIQPNGLCFLP 99

Query: 63  NTVRAHCSYAVNSYFQKKGQAQGSCDFAGVATISTTDPSAAGCSYPSSAGGSNGGGVTPV 122
           NTV+AH SYA NSYFQ+   A GSC+FAG +TI+ TDPS   C YP+S   + GG  +  
Sbjct: 100 NTVQAHASYAFNSYFQRAAMAPGSCNFAGTSTIAKTDPSYGSCVYPNSVRNA-GGSASTT 159

Query: 123 TMTPTPPGTTTVPGMTSPITRPPPSTTPTTTNNPLPNTASPTGVLGGAGTGVSPTVAGTT 182
           T+  TP  +TTV        RPP  T           T SP G+ GG G     T   T 
Sbjct: 160 TVGGTP--STTVGNSPMTTLRPPSGT-----------TTSPFGI-GGGGLNPQGTTTTTN 219

Query: 183 TDESHGGFRLQRHIFFSLSIVILFSFV 208
           TDES      +  +  +L + +L  F+
Sbjct: 220 TDESGSYIINKSTVSIALFVALLLWFI 231

The following BLAST results are available for this feature:

BLAST of Lsi02G001160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ86	2.3e-39	49.04	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3...	[more]
Q9SD84	6.2e-37	53.63	PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2...	[more]
Q9FNQ2	8.1e-37	46.48	PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1...	[more]
Q93V72	7.8e-24	43.75	PLASMODESMATA CALLOSE-BINDING PROTEIN 4 OS=Arabidopsis thaliana OX=3702 GN=PDCB4...	[more]
Q9FZD0	8.1e-21	40.21	Carbohydrate-binding X8 domain-containing protein OS=Arabidopsis thaliana OX=370...	[more]

BLAST of Lsi02G001160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
K8DWB8	1.1e-92	89.47	Glucan endo-1,3-beta-glucosidase-like protein OS=Cucumis sativus OX=3659 PE=2 SV...	[more]
A0A1S3BM94	4.1e-92	87.85	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like isoform X2 OS=Cucumis melo OX=3656 ...	[more]
A0A1S3BLH0	5.9e-91	86.18	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like isoform X1 OS=Cucumis melo OX=3656 ...	[more]
A0A6J1GT57	2.5e-89	86.12	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like isoform X2 OS=Cucurbita moschata OX...	[more]
A0A6J1GTR9	5.5e-89	85.31	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like isoform X1 OS=Cucurbita moschata OX...	[more]

BLAST of Lsi02G001160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895513.1	6.7e-97	88.73	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like isoform X2 [Benincasa hispida]	[more]
XP_038895511.1	1.9e-96	87.10	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like isoform X1 [Benincasa hispida]	[more]
NP_001292647.1	2.2e-92	89.47	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like precursor [Cucumis sativus] >CCM439...	[more]
KAE8652524.1	6.5e-92	89.00	hypothetical protein Csa_013819 [Cucumis sativus]	[more]
XP_008449549.1	8.5e-92	87.85	PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like isoform X2 [Cucumis melo...	[more]

BLAST of Lsi02G001160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18650.1	1.6e-40	49.04	plasmodesmata callose-binding protein 3	[more]
AT5G08000.1	4.4e-38	53.63	glucan endo-1,3-beta-glucosidase-like protein 3	[more]
AT5G61130.1	5.7e-38	46.48	plasmodesmata callose-binding protein 1	[more]
AT2G03505.1	1.9e-28	45.96	Carbohydrate-binding X8 domain superfamily protein	[more]
AT4G13600.1	1.9e-28	43.00	Carbohydrate-binding X8 domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 21..105 e-value: 1.5E-45 score: 167.3
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 22..92 e-value: 5.2E-22 score: 78.3
None	No IPR available	GENE3D	1.20.58.1040		coord: 16..109 e-value: 5.3E-11 score: 44.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..179
None	No IPR available	PANTHER	PTHR31044:SF25	PLASMODESMATA CALLOSE-BINDING PROTEIN 3	coord: 1..204
IPR044788	Carbohydrate-binding X8 domain-containing protein, plant	PANTHER	PTHR31044	BETA-1,3 GLUCANASE	coord: 1..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G001160.1	Lsi02G001160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma