Lsi02G000450 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCCAGTGGGGTTGCCTCCGGGGTTCAGGTTCCATCCCACCGACGAAGAGCTCGTCAATTATTATCTCAAAAGGAAGATCAGTGGCCAAGAAATCGAGCTTGATATCATTCCGGAGGTGGATCTCTACAAATGCGAGCCTTGGGAATTATCAGGTTAATTAATTTCCCATTTCCCATTTTAGTTGAGAAATTATATATTAGAAGAAACAATAATTATATTATTTGGTGAATTATATTTGTAGAGAAGTCGTTTCTTCCAAGTAGAGACCCAGAATGGTACTTCTTTGGGCCAAGAGACAGAAAATATCCAAATGGGTTCAGAACAAACAGAGCCACAAGAGCAGGGTACTGGAAATCCACTGGAAAAGACAGGCGAGTGAGTTCACAAAACCGAGCCATTGGGATGAAGAAGACGCTTGTTTACTACAGAGGCAGAGCCCCTCAAGGCATTAGAACCGACTGGGTCATGCATGAATATCGTCTCGACGACAAAGACTGCGAGGACAGCTCTGGCATTCAGGTATAAGCAATGATTAGACTACGTAATAAAAGAAAAAATAATAAAAATAATTCAACTTTAAAAATAAAATAATTCGAATTAGTTTCAGGTATTATCTCCTCTCCTACATTTGAATTTTCCAATTTCGAATTTTGTTCTCTTTTCCATTCTTTTTCCCATGCACAATGATTACCACCTTCTTTGAATTTTCTTTTCTTTTTTGCTCTTTTGATTTTTGTTTCTTTGCAATCATATTCTCTTCTTTAGAATTTTTATGATTGGGTTTAAAAGAACACGAGCCATCAGAAGAAGAGAACATCGACAAAGATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTGCCACTCGTCACTTTTAATTTCTTTTGCATTATTGGGGATAGAAAGCTTCCTAAAGTTTGGCTATATATATACATAATATTCTTCCAGCTTCCAAAGCCATCCCTAAAACTCTACTCTACGGTGTTAAATCAAAGGACTTCACCGAAAGCTGTTTTAAACTCTCATTAAACTTTAAGTTTTACTGTTTGTTTCACTGACATATGCGCGCATGCTCCTCTCCTCTCCCCATTTTTTCGCTACATGGTTAAGGCTCGGTGTGAATTCACTTGAGAAAAAAATGTTTTTCAAAAAATTTAGTTTTATTTAAACTTTTTTTTAATATATAAAACGGTTTAAAATACACTTCAAAATCTATTTTTGAGTAGTTTTTAGACACTCCAACTTTTTTCAAAATGACTTATTTTTAAAATTAAACACTCTAAAAGAAATATGTTTGATTTTTCTTTATTATCTTTATTTTTAGGCTAAATAATTTGATATCTAATTTTTTTTTTTGGAACAATGATATCTAAACTTTGGGATCATGTCTATACTATGTCCATGAAGTCATTAACTTTTAAAAATATTTCTAATGTTTCTAAATTTTTAGTTTTGTGAACACGTCTCTCAACTTAAATATTGAATTTGTTAGATTAAATATTAAAAGTTTAGACATTATGTTAGACATTTTTTAAAACGATTTTAAACATTTATTAAAGTTAAGAAATAACTTATTTGATTGTAGATAGAAAATCTAATCATAATCTATCTACAACAAGGCCACTGGATGACAATTTTTAAAAACTGTGTTTTTTTTTTAAAACTAGAACTAGTTGCTAAACAGTTCACTAATAAAAAAAAAAAAAAGAGAACATATATAGCAATATTGTGTATATTTTAACTAATAATATGTTATTTTTTTATCTCTTACTATCACTATAATCGATATAATTAGCTGCTCCAAAATGTGTTGTGTGGAATTAAAAGAAAGGGATAGGTAGTTACTGACAGTTTTTCTTTTTTTGTTTTTTCTGCAATTTGTAATGTAATAATATCAGTAGAAATTGAGAGTAGGAAGAAGACTTGAAAAAAATAAAAAAGAAAAAAAGAAAAAAGAAAGTCCATTTAGAGGGAAGCATGATAAAAAGAAATGAGTGGCATACATATTCTTTACTTGTACCAGGATCTTTCAAGTCATAAAGTTGAGTTTGGCTTTTGTTTTCTTATGGCAAATGAGACAAAAGTGCTATCCCCTATGACTTAAAAAACACACACACACACACAACCTGTTATTTTATTTTAATATATTCCATCTTTCCACCATTTTAGATCATCTATTCTATTATGAAAGTTGGATTCCCTCTTATTATTAATTTTTTTTTAAAATTAAATAAATTAGCTACCAAAATGAAGCTAGAGAGAGAGAGTAAGGCAAAAGAAGAGTCCCCCATCATTTGCTTTATTTTTTTTTTAGTTGTAAGAAGATGTCTCTCACTTTTCACTTTATTCCATCACTAAAATCACCCAATGGATCTCTCTTTGTCCACGAGTTTTGTTCAACTTGTGACACATACAACTTACTCTTTCTAAAGTTTTCGCCATTAATTTCTCCTTACATTCATCTCTTTTCATTCCTAAAATTAATTGAACTATATTTAGATTGACGCTTAAAGTTTAAGTTTAAGCGTTAGTGAATGAGACGAAAAATCGAAAGCTGAAATTAAAAATATAAAGCAGAAGAAAAGAGATAAATCCGAAGTGATCAGATGAAAATTGCAAGTGTTTTTTGTTTTGTTTTTGTTTATTGGGTTGCAGGATTCTTACGCATTGTGTAGAGTATTCAAGAAAAATGGAATATGTTCAGAAGTGGAAGAACAATTAGTAGGTGGGCAAAGTAGCAGCTTATCATTTATGGAGAACTCAAACTCAAACTCAACATCACAAACTTTGGTCAATGATTACGAAACTTTATCACCTGATATTCTGATGGCAGCTTCATCTTCTTGTGTGGAGGAAGAAGAAAAGGATGATTCATGGATGCAATTCATTACAGAAGATGCATGGTGTGCTTCCAATTCATCGGCCATCGGCCTCGACGACCTCTCTCACCTGACTTTCACCAATTGA ATGGCGCCAGTGGGGTTGCCTCCGGGGTTCAGGTTCCATCCCACCGACGAAGAGCTCGTCAATTATTATCTCAAAAGGAAGATCAGTGGCCAAGAAATCGAGCTTGATATCATTCCGGAGGTGGATCTCTACAAATGCGAGCCTTGGGAATTATCAGAGAAGTCGTTTCTTCCAAGTAGAGACCCAGAATGGTACTTCTTTGGGCCAAGAGACAGAAAATATCCAAATGGGTTCAGAACAAACAGAGCCACAAGAGCAGGGTACTGGAAATCCACTGGAAAAGACAGGCGAGTGAGTTCACAAAACCGAGCCATTGGGATGAAGAAGACGCTTGTTTACTACAGAGGCAGAGCCCCTCAAGGCATTAGAACCGACTGGGTCATGCATGAATATCGTCTCGACGACAAAGACTGCGAGGACAGCTCTGGCATTCAGGATTCTTACGCATTGTGTAGAGTATTCAAGAAAAATGGAATATGTTCAGAAGTGGAAGAACAATTAGTAGGTGGGCAAAGTAGCAGCTTATCATTTATGGAGAACTCAAACTCAAACTCAACATCACAAACTTTGGTCAATGATTACGAAACTTTATCACCTGATATTCTGATGGCAGCTTCATCTTCTTGTGTGGAGGAAGAAGAAAAGGATGATTCATGGATGCAATTCATTACAGAAGATGCATGGTGTGCTTCCAATTCATCGGCCATCGGCCTCGACGACCTCTCTCACCTGACTTTCACCAATTGA ATGGCGCCAGTGGGGTTGCCTCCGGGGTTCAGGTTCCATCCCACCGACGAAGAGCTCGTCAATTATTATCTCAAAAGGAAGATCAGTGGCCAAGAAATCGAGCTTGATATCATTCCGGAGGTGGATCTCTACAAATGCGAGCCTTGGGAATTATCAGAGAAGTCGTTTCTTCCAAGTAGAGACCCAGAATGGTACTTCTTTGGGCCAAGAGACAGAAAATATCCAAATGGGTTCAGAACAAACAGAGCCACAAGAGCAGGGTACTGGAAATCCACTGGAAAAGACAGGCGAGTGAGTTCACAAAACCGAGCCATTGGGATGAAGAAGACGCTTGTTTACTACAGAGGCAGAGCCCCTCAAGGCATTAGAACCGACTGGGTCATGCATGAATATCGTCTCGACGACAAAGACTGCGAGGACAGCTCTGGCATTCAGGATTCTTACGCATTGTGTAGAGTATTCAAGAAAAATGGAATATGTTCAGAAGTGGAAGAACAATTAGTAGGTGGGCAAAGTAGCAGCTTATCATTTATGGAGAACTCAAACTCAAACTCAACATCACAAACTTTGGTCAATGATTACGAAACTTTATCACCTGATATTCTGATGGCAGCTTCATCTTCTTGTGTGGAGGAAGAAGAAAAGGATGATTCATGGATGCAATTCATTACAGAAGATGCATGGTGTGCTTCCAATTCATCGGCCATCGGCCTCGACGACCTCTCTCACCTGACTTTCACCAATTGA MAPVGLPPGFRFHPTDEELVNYYLKRKISGQEIELDIIPEVDLYKCEPWELSEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVSSQNRAIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKDCEDSSGIQDSYALCRVFKKNGICSEVEEQLVGGQSSSLSFMENSNSNSTSQTLVNDYETLSPDILMAASSSCVEEEEKDDSWMQFITEDAWCASNSSAIGLDDLSHLTFTN Homology
BLAST of Lsi02G000450 vs. ExPASy Swiss-Prot
Match: Q9FFI5 (NAC domain-containing protein 86 OS=Arabidopsis thaliana OX=3702 GN=NAC086 PE=2 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 1.4e-72 Identity = 141/237 (59.49%), Postives = 169/237 (71.31%), Query Frame = 0
BLAST of Lsi02G000450 vs. ExPASy Swiss-Prot
Match: A4VCM0 (NAC domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN=NAC045 PE=2 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 9.1e-72 Identity = 133/206 (64.56%), Postives = 158/206 (76.70%), Query Frame = 0
BLAST of Lsi02G000450 vs. ExPASy Swiss-Prot
Match: Q9LS24 (NAC domain-containing protein 96 OS=Arabidopsis thaliana OX=3702 GN=NAC096 PE=1 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 1.2e-58 Identity = 110/187 (58.82%), Postives = 142/187 (75.94%), Query Frame = 0
BLAST of Lsi02G000450 vs. ExPASy Swiss-Prot
Match: O49697 (NAC domain-containing protein 71 OS=Arabidopsis thaliana OX=3702 GN=NAC071 PE=2 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 4.5e-55 Identity = 116/232 (50.00%), Postives = 150/232 (64.66%), Query Frame = 0
BLAST of Lsi02G000450 vs. ExPASy Swiss-Prot
Match: Q84K00 (NAC domain-containing protein 78 OS=Arabidopsis thaliana OX=3702 GN=NAC078 PE=2 SV=2) HSP 1 Score: 211.8 bits (538), Expect = 8.5e-54 Identity = 95/161 (59.01%), Postives = 121/161 (75.16%), Query Frame = 0
BLAST of Lsi02G000450 vs. ExPASy TrEMBL
Match: A0A1S3AYC8 (NAC domain-containing protein 86 OS=Cucumis melo OX=3656 GN=LOC103484068 PE=4 SV=1) HSP 1 Score: 498.0 bits (1281), Expect = 2.2e-137 Identity = 245/250 (98.00%), Postives = 245/250 (98.00%), Query Frame = 0
BLAST of Lsi02G000450 vs. ExPASy TrEMBL
Match: A0A0A0LVE2 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G032410 PE=4 SV=1) HSP 1 Score: 497.7 bits (1280), Expect = 2.9e-137 Identity = 245/250 (98.00%), Postives = 245/250 (98.00%), Query Frame = 0
BLAST of Lsi02G000450 vs. ExPASy TrEMBL
Match: A0A6J1KDB6 (NAC domain-containing protein 86-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493315 PE=4 SV=1) HSP 1 Score: 487.6 bits (1254), Expect = 3.0e-134 Identity = 238/248 (95.97%), Postives = 243/248 (97.98%), Query Frame = 0
BLAST of Lsi02G000450 vs. ExPASy TrEMBL
Match: A0A6J1GD97 (NAC domain-containing protein 86-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452899 PE=4 SV=1) HSP 1 Score: 485.7 bits (1249), Expect = 1.1e-133 Identity = 237/248 (95.56%), Postives = 242/248 (97.58%), Query Frame = 0
BLAST of Lsi02G000450 vs. ExPASy TrEMBL
Match: A0A6J1KPL4 (NAC domain-containing protein 86 OS=Cucurbita maxima OX=3661 GN=LOC111495360 PE=4 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 1.2e-127 Identity = 230/249 (92.37%), Postives = 234/249 (93.98%), Query Frame = 0
BLAST of Lsi02G000450 vs. NCBI nr
Match: XP_038895462.1 (NAC domain-containing protein 86 [Benincasa hispida]) HSP 1 Score: 501.5 bits (1290), Expect = 4.1e-138 Identity = 245/248 (98.79%), Postives = 245/248 (98.79%), Query Frame = 0
BLAST of Lsi02G000450 vs. NCBI nr
Match: XP_008439242.1 (PREDICTED: NAC domain-containing protein 86 [Cucumis melo]) HSP 1 Score: 498.0 bits (1281), Expect = 4.6e-137 Identity = 245/250 (98.00%), Postives = 245/250 (98.00%), Query Frame = 0
BLAST of Lsi02G000450 vs. NCBI nr
Match: XP_004137396.1 (NAC domain-containing protein 86 [Cucumis sativus] >KGN63971.1 hypothetical protein Csa_013549 [Cucumis sativus]) HSP 1 Score: 497.7 bits (1280), Expect = 5.9e-137 Identity = 245/250 (98.00%), Postives = 245/250 (98.00%), Query Frame = 0
BLAST of Lsi02G000450 vs. NCBI nr
Match: XP_022998740.1 (NAC domain-containing protein 86-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 487.6 bits (1254), Expect = 6.2e-134 Identity = 238/248 (95.97%), Postives = 243/248 (97.98%), Query Frame = 0
BLAST of Lsi02G000450 vs. NCBI nr
Match: XP_022949589.1 (NAC domain-containing protein 86-like isoform X1 [Cucurbita moschata] >XP_023523518.1 NAC domain-containing protein 86-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 485.7 bits (1249), Expect = 2.3e-133 Identity = 237/248 (95.56%), Postives = 242/248 (97.58%), Query Frame = 0
BLAST of Lsi02G000450 vs. TAIR 10
Match: AT3G17730.1 (NAC domain containing protein 57 ) HSP 1 Score: 389.4 bits (999), Expect = 2.1e-108 Identity = 192/243 (79.01%), Postives = 215/243 (88.48%), Query Frame = 0
BLAST of Lsi02G000450 vs. TAIR 10
Match: AT1G65910.1 (NAC domain containing protein 28 ) HSP 1 Score: 288.1 bits (736), Expect = 6.7e-78 Identity = 140/238 (58.82%), Postives = 181/238 (76.05%), Query Frame = 0
BLAST of Lsi02G000450 vs. TAIR 10
Match: AT5G17260.1 (NAC domain containing protein 86 ) HSP 1 Score: 274.2 bits (700), Expect = 1.0e-73 Identity = 141/237 (59.49%), Postives = 169/237 (71.31%), Query Frame = 0
BLAST of Lsi02G000450 vs. TAIR 10
Match: AT3G03200.1 (NAC domain containing protein 45 ) HSP 1 Score: 271.6 bits (693), Expect = 6.5e-73 Identity = 133/206 (64.56%), Postives = 158/206 (76.70%), Query Frame = 0
BLAST of Lsi02G000450 vs. TAIR 10
Match: AT1G54330.1 (NAC domain containing protein 20 ) HSP 1 Score: 253.1 bits (645), Expect = 2.4e-67 Identity = 133/248 (53.63%), Postives = 162/248 (65.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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