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Lsi02G000440 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGTGCAATCAATATATATACTAAAAACAAAAAGTAGTGATTAATTCTCTTTATTTCTAGTGGATCAAAATATTTGATGATGGGATCCATTTATTTATATAAATTAATTATAAGGTTGTGACAAGACAAATTATTATTAAAATGAATTGGATGTGATAATATCAACATTTTGAGTTTGATGAGCAGCGTAATGCCCCGGAGGAGCTTGTTAATGATCTGAGCCACTTGGCATCTGCAACTGGAAACCGTTGTTGGGCGTTGTAATTTGGCTTTACACCTCCTCTTCCCACACCAATTTGTGCAAATGAAGCTCCGTTTTCAAATACGTCTCTTACTGAATGAAACTTCCATTTAGTCTCCTCTACCTTCCCTGTGCTCCATATAATCTGCATTTGCATTAATTAAAAAAAAAAAAAAAAAAACTCAATTTTCAAATCAATATTATTTTATATATATATATATATATATATATATATCCAAATTCAATTTAATTTTAGTATTATTGTTACCTGTTTTGACTTTGATGCGATGAAAAGGTTGGCTTCGCTCTTGACGCTCGGATTCATGCTCCCTCCAATTGCGTATTGCGTCCAACCTTGGTACAAATTGTTCGCCACGTGTGCATACCCATATCGAATCCTACAATATGAGTATATTAATACCAAAAATACTTTATATTAAATGTATTCCGAGCACCACTTATTTTTTTCATCTCATCAGCAAATTTGAGAGGATGAATAAAGATGGATGCATATTAAGATACACTCAAATATTATCCTATTAATATTGTGTTTGATAATTATTTAGCAATGTTAATTATATTTCATTTTCTCAAAAAAAAATGTTAATTATTTCATAATATATATTGGGCTAAATTATATAAAAAAATACCTTTGAACTTTACACTTTGTATAAAAAATATCCTTTAACTTTTAAAAGTTTCAAAATCAACGTTAAACTTTTATAAAGAATTCAAAAGTACTTTTGCGGACAGTTTTGAAAGAAAATCTTTAATGTTTTGTTACAAAAATACACATAAACTTTTAAAAGTGTCAAAAATATATTTAAACTTATAAAATATTTTAAAAAATACCTTTACTACTGGTATATATGAACAAGAATTGTTATTGTCCTCTTCTATAATTTTCTACTTTTTTTCTCTCGGATGTATATATGACAGTAAAGATATTTTTAAATATTTTTTTTAAAAGTTTAAAGGTATTGTTTACATAAAACATTAACCGTTTTCATCCATATAGATAATTTTGATTTTTTTTTTTTTTAATTTGAGGATATTTTAAAACTTAAAAGGTATTTTTAACAAAAACAAAAAATACAGAATTTAAGAATATTTGATACCTTGGCATTCTCTGGTTGCAATTGGGTCCAAAATGGTTATAGACGACAGTGACTCTCATGTTCCGATCTCGGACATAGCCGTCATCGTGACCAAGAAGAATAACCTTGTCTTGGTCTCGGAACCAATTGTTGGAAATGGTGATGTCAGTGGACCCACGGGTGACGTCAAGCAACCCATCCTCGCAGCGGTACAGCGTGTTGTGGTCAACCCACACTTTGGAGGCCGTTACTAAACGAATGGCATCACCATCCACGTGTCCAAGTGAAATGATCTTCGAATTGGGGCCCATGACTTGACCCGCCGCCTGAGCCCTGCAGTGGTGGATAATAAGGCCGTGGATTATGATGTTGGTGGCCTTGAAAACCATCAGACACGCATTCCCGGTGATGTGGACGGTAGCGCCTCGGCCGTCGATGGCGGTGAAGCTGCTAATGAGAAGCGGCTTCTTAAGCACAATATTCATGTCTTTTCGGAATGTGATCCAGACTTTGGGTTTGATCATTGTTGCGCCGTATCTGAGCGTACCTGGGCGTGGGTTTATAGGGTCGTCGCTAGGGTCCGTGACTTGGTAGCGTATGAGATTTCTTCCCATGTTGTTGGTCATTTTTCCAGCGAACCCAACTGAACAAACGGCGAGTTGTTGCCTGTTTCTTCTCCAGTATGGGTTTGATCTCCAGCATCTGTCAATGGCGTTCATCTTCAAGCCATGGGCTTCTGAATAG ATGAAACGTAATGCCCCGGAGGAGCTTGTTAATGATCTGAGCCACTTGGCATCTGCAACTGGAAACCGTTGTTGGGCGTTTATTATTGTTACCTGTTTTGACTTTGATGCGATGAAAAGGTTGGCTTCGCTCTTGACGCTCGGATTCATGCTCCCTCCAATTGCGTATTGCGTCCAACCTTGGTACAAATTGTTCGCCACTGACTCTCATGTTCCGATCTCGGACATAGCCGTCATCGTGACCAAGAAGAATAACCTTGTCTTGGTCTCGGAACCAATTGTTGGAAATGGTGATGTCAGTGGACCCACGGGTGACGTCAAGCAACCCATCCTCGCAGCGGTACAGCGTGTTGTGGTCAACCCACACTTTGGAGGCCTGGTGGATAATAAGGCCGTGGATTATGATGTTGGTGGCCTTGAAAACCATCAGACACGCATTCCCGGTGATGTGGACGGTAGCGCCTCGGCCGTCGATGGCGGTGAAGCTGCTAATGAGAAGCGGCTTCTTAAGCACAATATTCATGTCTTTTCGGAATGTGATCCAGACTTTGGGTTTGATCATTGTTGCGCCGTATCTGAGCGTACCTGGGCGTGGGTTTATAGGGTCGTCGCTAGGGTCCGTGACTTGGTAGCGTATGAGATTTCTTCCCATGTTGTTGCGAACCCAACTGAACAAACGGCGAGTTGTTGCCTGTTTCTTCTCCAGTATGGGTTTGATCTCCAGCATCTGTCAATGGCGTTCATCTTCAAGCCATGGGCTTCTGAATAG ATGAAACGTAATGCCCCGGAGGAGCTTGTTAATGATCTGAGCCACTTGGCATCTGCAACTGGAAACCGTTGTTGGGCGTTTATTATTGTTACCTGTTTTGACTTTGATGCGATGAAAAGGTTGGCTTCGCTCTTGACGCTCGGATTCATGCTCCCTCCAATTGCGTATTGCGTCCAACCTTGGTACAAATTGTTCGCCACTGACTCTCATGTTCCGATCTCGGACATAGCCGTCATCGTGACCAAGAAGAATAACCTTGTCTTGGTCTCGGAACCAATTGTTGGAAATGGTGATGTCAGTGGACCCACGGGTGACGTCAAGCAACCCATCCTCGCAGCGGTACAGCGTGTTGTGGTCAACCCACACTTTGGAGGCCTGGTGGATAATAAGGCCGTGGATTATGATGTTGGTGGCCTTGAAAACCATCAGACACGCATTCCCGGTGATGTGGACGGTAGCGCCTCGGCCGTCGATGGCGGTGAAGCTGCTAATGAGAAGCGGCTTCTTAAGCACAATATTCATGTCTTTTCGGAATGTGATCCAGACTTTGGGTTTGATCATTGTTGCGCCGTATCTGAGCGTACCTGGGCGTGGGTTTATAGGGTCGTCGCTAGGGTCCGTGACTTGGTAGCGTATGAGATTTCTTCCCATGTTGTTGCGAACCCAACTGAACAAACGGCGAGTTGTTGCCTGTTTCTTCTCCAGTATGGGTTTGATCTCCAGCATCTGTCAATGGCGTTCATCTTCAAGCCATGGGCTTCTGAATAG MKRNAPEELVNDLSHLASATGNRCWAFIIVTCFDFDAMKRLASLLTLGFMLPPIAYCVQPWYKLFATDSHVPISDIAVIVTKKNNLVLVSEPIVGNGDVSGPTGDVKQPILAAVQRVVVNPHFGGLVDNKAVDYDVGGLENHQTRIPGDVDGSASAVDGGEAANEKRLLKHNIHVFSECDPDFGFDHCCAVSERTWAWVYRVVARVRDLVAYEISSHVVANPTEQTASCCLFLLQYGFDLQHLSMAFIFKPWASE Homology
BLAST of Lsi02G000440 vs. ExPASy TrEMBL
Match: A0A4Y1QW81 (Exonuclease family protein OS=Prunus dulcis OX=3755 GN=Prudu_004819 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.8e-09 Identity = 38/83 (45.78%), Postives = 54/83 (65.06%), Query Frame = 0
BLAST of Lsi02G000440 vs. ExPASy TrEMBL
Match: A0A7I8KE02 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI8410_05006594 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 1.9e-06 Identity = 52/163 (31.90%), Postives = 73/163 (44.79%), Query Frame = 0
BLAST of Lsi02G000440 vs. ExPASy TrEMBL
Match: C4IZH1 (Uncharacterized protein OS=Zea mays OX=4577 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 1.6e-05 Identity = 54/186 (29.03%), Postives = 77/186 (41.40%), Query Frame = 0
BLAST of Lsi02G000440 vs. ExPASy TrEMBL
Match: A0A444D7Y4 (Uncharacterized protein (Fragment) OS=Ensete ventricosum OX=4639 GN=GW17_00043216 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 1.6e-05 Identity = 43/128 (33.59%), Postives = 60/128 (46.88%), Query Frame = 0
BLAST of Lsi02G000440 vs. ExPASy TrEMBL
Match: A0A151TQ30 (Uncharacterized protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_008314 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.0e-04 Identity = 46/165 (27.88%), Postives = 68/165 (41.21%), Query Frame = 0
BLAST of Lsi02G000440 vs. NCBI nr
Match: BBG96110.1 (Exonuclease family protein [Prunus dulcis]) HSP 1 Score: 73.2 bits (178), Expect = 3.7e-09 Identity = 38/83 (45.78%), Postives = 54/83 (65.06%), Query Frame = 0
BLAST of Lsi02G000440 vs. NCBI nr
Match: KAF7820188.1 (hypothetical protein G2W53_025643 [Senna tora]) HSP 1 Score: 71.2 bits (173), Expect = 1.4e-08 Identity = 53/162 (32.72%), Postives = 76/162 (46.91%), Query Frame = 0
BLAST of Lsi02G000440 vs. NCBI nr
Match: CAA7395931.1 (unnamed protein product [Spirodela intermedia]) HSP 1 Score: 63.2 bits (152), Expect = 3.9e-06 Identity = 52/163 (31.90%), Postives = 73/163 (44.79%), Query Frame = 0
BLAST of Lsi02G000440 vs. NCBI nr
Match: ACR34321.1 (unknown [Zea mays]) HSP 1 Score: 60.1 bits (144), Expect = 3.3e-05 Identity = 54/186 (29.03%), Postives = 77/186 (41.40%), Query Frame = 0
BLAST of Lsi02G000440 vs. NCBI nr
Match: RWV94256.1 (hypothetical protein GW17_00043216, partial [Ensete ventricosum]) HSP 1 Score: 60.1 bits (144), Expect = 3.3e-05 Identity = 43/128 (33.59%), Postives = 60/128 (46.88%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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