Lsi02G000430 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G000430
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Pectate lyase
Location	chr02: 427990 .. 429978 (+)
RNA-Seq Expression	Lsi02G000430
Synteny	Lsi02G000430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCACCACTCAACAACTCTTTGTTCTGTCTCTCATTTCCCTCACTCTCCTCTCCGCCGCAGTTTCCTATTCAGAAGCCCATGGCTTGAAGATGAACGCCATTGACAGATGCTGGAGATCAAACCCATACTGGAGAAGAAACAGGCAACAACTCGCCGTTTGTTCAGTTGGGTTCGCTGGAAAAATGACCAACAACATGGGAAGAAATCTCATACGCTACCAAGTCACGGACCCTAGCGACGACCCTATAAACCCACGCCCAGGTACGCTCAGATACGGCGCAACAATGATCAAACCCAAAGTCTGGATCACATTCCGAAAAGACATGAATATTGTGCTTAAGAAGCCGCTTCTCATTAGCAGCTTCACCGCCATCGACGGCCGAGGCGCTACCGTCCACATCACCGGGAATGCGTGTCTGATGGTTTTCAAGGCCACCAACATCATAATCCACGGCCTTATTATCCACCACTGCAGGGCTCAGGCGGCGGGTCAAGTCATGGGCCCCAATTCGAAGATCATTTCACTTGGACACGTGGATGGTGATGCCATTCGTTTAGTAACGGCCTCCAAAGTGTGGGTTGACCACAACACGCTGTACCGCTGCGAGGATGGGTTGCTTGACGTCACCCGTGGGTCCACTGACATCACCATTTCCAACAATTGGTTCCGAGACCAAGACAAGGTTATTCTTCTTGGTCACGATGACGGCTATGTCCGAGATCGGAACATGAGAGTCACTGTCGTCTATAACCATTTTGGACCCAATTGCAACCAGAGAATGCCAAGGTATCAAATATTCTTAAATTCTGTATTTTTTGTTTTTGTTAAAAATACCTTTTAAGTTTTAAAATATCCTCAAATTAAAAAAAAAAAAAATCAAAATTATCTATATGGATGAAAACGGTTAATGTTTTATGTAAACAATACCTTTAAACTTTTAAAAAAAATATTTAAAAATATCTTTACTGTCATATATACATCCGAGAGAAAAAAAGTAGAAAATTATAGAAGAGGACAATAACAATTCTTGTTCATATATACCAGTAGTAAAGGTATTTTTTAAAATATTTTATAAGTTTAAATATATTTTTGACACTTTTAAAAGTTTATGTGTATTTTTGTAACAAAACATTAAAGATTTTCTTTCAAAACTGTCCGCAAAAGTACTTTTGAATTCTTTATAAAAGTTTAACGTTGATTTTGAAACTTTTAAAAGTTAAAGGATATTTTTTATACAAAGTGTAAAGTTCAAAGGTATTTTTTTATATAATTTAGCCCAATATATATTATGAAATAATTAACATTTTTTTTTGAGAAAATGAAATATAATTAACATTGCTAAATAATTATCAAACACAATATTAATAGGATAATATTTGAGTGTATCTTAATATGCATCCATCTTTATTCATCCTCTCAAATTTGCTGATGAGATGAAAAAAATAAGTGGTGCTCGGAATACATTTAATATAAAGTATTTTTGGTATTAATATACTCATATTGTAGGATTCGATATGGGTATGCACACGTGGCGAACAATTTGTACCAAGGTTGGACGCAATACGCAATTGGAGGGAGCATGAATCCGAGCGTCAAGAGCGAAGCCAACCTTTTCATCGCATCAAAGTCAAAACAGGTAACAATAATACTAAAATTAAATTGAATTTGGATATATATATATATATATATATATATATAAAATAATATTGATTTGAAAATTGAGTTTTTTTTTTTTTTTTTTTAATTAATGCAAATGCAGATTATATGGAGCACAGGGAAGGTAGAGGAGACTAAATGGAAGTTTCATTCAGTAAGAGACGTATTTGAAAACGGAGCTTCATTTGCACAAATTGGTGTGGGAAGAGGAGGTGTAAAGCCAAATTACAACGCCCAACAACGGTTTCCAGTTGCAGATGCCAAGTGGCTCAGATCATTAACAAGCTCCTCCGGGGCATTACGCTGCTCATCAAACTCAAAATGTTGA

mRNA sequence

ATGACCACCACTCAACAACTCTTTGTTCTGTCTCTCATTTCCCTCACTCTCCTCTCCGCCGCAGTTTCCTATTCAGAAGCCCATGGCTTGAAGATGAACGCCATTGACAGATGCTGGAGATCAAACCCATACTGGAGAAGAAACAGGCAACAACTCGCCGTTTGTTCAGTTGGGTTCGCTGGAAAAATGACCAACAACATGGGAAGAAATCTCATACGCTACCAAGTCACGGACCCTAGCGACGACCCTATAAACCCACGCCCAGGTACGCTCAGATACGGCGCAACAATGATCAAACCCAAAGTCTGGATCACATTCCGAAAAGACATGAATATTGTGCTTAAGAAGCCGCTTCTCATTAGCAGCTTCACCGCCATCGACGGCCGAGGCGCTACCGTCCACATCACCGGGAATGCGTGTCTGATGGTTTTCAAGGCCACCAACATCATAATCCACGGCCTTATTATCCACCACTGCAGGGCTCAGGCGGCGGGTCAAGTCATGGGCCCCAATTCGAAGATCATTTCACTTGGACACGTGGATGGTGATGCCATTCGTTTAGTAACGGCCTCCAAAGTGTGGGTTGACCACAACACGCTGTACCGCTGCGAGGATGGGTTGCTTGACGTCACCCGTGGGTCCACTGACATCACCATTTCCAACAATTGGTTCCGAGACCAAGACAAGGTTATTCTTCTTGGTCACGATGACGGCTATGTCCGAGATCGGAACATGAGAGTCACTGTCGTCTATAACCATTTTGGACCCAATTGCAACCAGAGAATGCCAAGGATTCGATATGGGTATGCACACGTGGCGAACAATTTGTACCAAGGTTGGACGCAATACGCAATTGGAGGGAGCATGAATCCGAGCGTCAAGAGCGAAGCCAACCTTTTCATCGCATCAAAGTCAAAACAGATTATATGGAGCACAGGGAAGGTAGAGGAGACTAAATGGAAGTTTCATTCAGTAAGAGACGTATTTGAAAACGGAGCTTCATTTGCACAAATTGGTGTGGGAAGAGGAGGTGTAAAGCCAAATTACAACGCCCAACAACGGTTTCCAGTTGCAGATGCCAAGTGGCTCAGATCATTAACAAGCTCCTCCGGGGCATTACGCTGCTCATCAAACTCAAAATGTTGA

Coding sequence (CDS)

ATGACCACCACTCAACAACTCTTTGTTCTGTCTCTCATTTCCCTCACTCTCCTCTCCGCCGCAGTTTCCTATTCAGAAGCCCATGGCTTGAAGATGAACGCCATTGACAGATGCTGGAGATCAAACCCATACTGGAGAAGAAACAGGCAACAACTCGCCGTTTGTTCAGTTGGGTTCGCTGGAAAAATGACCAACAACATGGGAAGAAATCTCATACGCTACCAAGTCACGGACCCTAGCGACGACCCTATAAACCCACGCCCAGGTACGCTCAGATACGGCGCAACAATGATCAAACCCAAAGTCTGGATCACATTCCGAAAAGACATGAATATTGTGCTTAAGAAGCCGCTTCTCATTAGCAGCTTCACCGCCATCGACGGCCGAGGCGCTACCGTCCACATCACCGGGAATGCGTGTCTGATGGTTTTCAAGGCCACCAACATCATAATCCACGGCCTTATTATCCACCACTGCAGGGCTCAGGCGGCGGGTCAAGTCATGGGCCCCAATTCGAAGATCATTTCACTTGGACACGTGGATGGTGATGCCATTCGTTTAGTAACGGCCTCCAAAGTGTGGGTTGACCACAACACGCTGTACCGCTGCGAGGATGGGTTGCTTGACGTCACCCGTGGGTCCACTGACATCACCATTTCCAACAATTGGTTCCGAGACCAAGACAAGGTTATTCTTCTTGGTCACGATGACGGCTATGTCCGAGATCGGAACATGAGAGTCACTGTCGTCTATAACCATTTTGGACCCAATTGCAACCAGAGAATGCCAAGGATTCGATATGGGTATGCACACGTGGCGAACAATTTGTACCAAGGTTGGACGCAATACGCAATTGGAGGGAGCATGAATCCGAGCGTCAAGAGCGAAGCCAACCTTTTCATCGCATCAAAGTCAAAACAGATTATATGGAGCACAGGGAAGGTAGAGGAGACTAAATGGAAGTTTCATTCAGTAAGAGACGTATTTGAAAACGGAGCTTCATTTGCACAAATTGGTGTGGGAAGAGGAGGTGTAAAGCCAAATTACAACGCCCAACAACGGTTTCCAGTTGCAGATGCCAAGTGGCTCAGATCATTAACAAGCTCCTCCGGGGCATTACGCTGCTCATCAAACTCAAAATGTTGA

Protein sequence

MTTTQQLFVLSLISLTLLSAAVSYSEAHGLKMNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLLISSFTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGHVDGDAIRLVTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKSKQIIWSTGKVEETKWKFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPVADAKWLRSLTSSSGALRCSSNSKC

Homology

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BLAST of Lsi02G000430 vs. ExPASy Swiss-Prot
Match: O65388 (Putative pectate lyase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g11920 PE=3 SV=2)

HSP 1 Score: 334.0 bits (855), Expect = 2.3e-90
Identity = 174/384 (45.31%), Postives = 236/384 (61.46%), Query Frame = 0


Query: 7   LFVLSLISLTLLSAAVSYSEAHG-----LKMNAIDRCWRSNPYWRRNRQQLAVCSVGFAG 66
           L ++SL+     S+ V  + ++G     L  N ID CWR NPYW  NR+ LA C+VGF  
Sbjct: 6   LTIISLLFAAFSSSVVEAAYSNGYTIPKLLPNPIDSCWRRNPYWASNRRALADCAVGFGK 65

Query: 67  KMTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLLIS 126
                 G+    Y VT+PSDDP NPRPGTLRY     KP +WITF +DM IVL+  L+++
Sbjct: 66  SAVG--GKYGSIYVVTNPSDDPENPRPGTLRYAVIQSKP-LWITFARDMVIVLRNELIMN 125

Query: 127 SFTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGHVD 186
           S+  IDGRGA V I    C+ +   +++IIHG+ IH C+   +G+V    + + S    D
Sbjct: 126 SYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRSSPTHVGSRKGSD 185

Query: 187 GDAIRLVTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVR 246
           GDAI +  +S +W+DH    RC+DGL+DV   ST +TISNN+F   DKV+LLGH+D  V 
Sbjct: 186 GDAIAIFDSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDNNVE 245

Query: 247 DRNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFI 306
           D+ MRVT+ +NHFGP   +RMPR+R GYAHVANN Y+ W  YAIGGS +P++ SE N F+
Sbjct: 246 DKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSADPTIFSEGNYFV 305

Query: 307 ASKSKQIIWSTGKVEE----TKWKFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPV 366
           AS        T +++      +WK+ + +DVF+NGA F  +  G G V P Y   +RFPV
Sbjct: 306 ASDDPSKKQVTKRIDSGYDWKRWKWRTSKDVFKNGAYF--VPSGYGTVTPLYGRAERFPV 365

Query: 367 ADAKWLRSLTSSSGALRCSSNSKC 382
           +    +  LTSS+G L C S   C
Sbjct: 366 SHGSLVPLLTSSAGPLHCYSGRIC 384

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BLAST of Lsi02G000430 vs. ExPASy Swiss-Prot
Match: Q9C8G4 (Probable pectate lyase 4 OS=Arabidopsis thaliana OX=3702 GN=At1g30350 PE=2 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 3.1e-87
Identity = 177/378 (46.83%), Postives = 231/378 (61.11%), Query Frame = 0


Query: 9   VLSLISLTLLSAAVSYS-EAHGLKMNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNM 68
           +L+  +  LL  A SY+  A  + +N ID CWR NP W  NRQ LA C+VG+ GK     
Sbjct: 11  LLAAFASPLLETAHSYNVTAPRVSLNPIDACWRRNPKWATNRQALAHCAVGY-GKAAIG- 70

Query: 69  GRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLLISSFTAID 128
           G+N   Y VT+PSD+P  P PGTLRY  +  KP +WITF +DM IVLK  L+I+S+  ID
Sbjct: 71  GKNGPIYVVTNPSDNPTRPSPGTLRYAVSQPKP-LWITFARDMVIVLKSQLMINSYKTID 130

Query: 129 GRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGHVDGDAIRL 188
           GRGA V I    CL + +  ++IIHG+ IH C+A   G              +DGD IR+
Sbjct: 131 GRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNG--------------MDGDGIRV 190

Query: 189 VTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRV 248
             ++ VW+DH  L RC DGL+DV   ST +TISNN+F   DKV+LLGHDD Y+ D++MRV
Sbjct: 191 FQSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSYMGDKDMRV 250

Query: 249 TVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKSKQ 308
           T+ +N FGP   +RMPR+R GYAHVANN Y+ W  YAIGGS NP + SE N F+A + + 
Sbjct: 251 TIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNYFVAPEKRS 310

Query: 309 IIWSTGKV----EETKWKFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPVADAKWL 368
               T ++    +  +WK+ + RDVF NGA F   GV    V+P Y   + F VA    +
Sbjct: 311 SKQVTKRMMAGPDSKRWKWGTSRDVFMNGAFFGPPGV---IVRPLYKGGEGFRVAHGSLV 368

Query: 369 RSLTSSSGALRCSSNSKC 382
            SLTSS+G LRC     C
Sbjct: 371 PSLTSSAGPLRCYVGRIC 368

[Close]

BLAST of Lsi02G000430 vs. ExPASy Swiss-Prot
Match: O65456 (Probable pectate lyase 16 OS=Arabidopsis thaliana OX=3702 GN=At4g22080 PE=2 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 1.3e-85
Identity = 162/353 (45.89%), Postives = 214/353 (60.62%), Query Frame = 0


Query: 32  MNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNMGRNLIRYQVTDPSDDPINPRPGTL 91
           MN +D CWR    W  NR+ LA C VGF          NL  Y VT+P D+  NP+PG+L
Sbjct: 46  MNPVDSCWRLKSDWAANRKDLADCVVGFGSSTLGGKKGNL--YVVTNPYDNAQNPQPGSL 105

Query: 92  RYGATMIKPKVWITFRKDMNIVLKKPLLISSFTAIDGRGATVHITGNACLMVFKATNIII 151
           RYG    KP +WITF KDM I L+  L+++S+  IDGRGA V I    C+ +   TN+I+
Sbjct: 106 RYGVIQAKP-LWITFAKDMVITLENELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 152 HGLIIHHCRAQAAGQVMGPNSKIISLGHVDGDAIRLVTASKVWVDHNTLYRCEDGLLDVT 211
           HG+ IH C+    G V    + +      DGDAI +  +S +W+DH  L  C DGL+DV 
Sbjct: 166 HGISIHDCKPGKYGMVRSSPTHVGHRKGSDGDAIAIFGSSNIWIDHCYLASCTDGLIDVI 225

Query: 212 RGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAH 271
             ST ITISNN+F   DKV+LLGH+D +V+D  M+VTV +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTGITISNNYFTQHDKVMLLGHNDDFVQDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 272 VANNLYQGWTQYAIGGSMNPSVKSEANLFIA---SKSKQIIWSTGKVEETKWKFHSVRDV 331
           VANN Y  W  YAIGGS +P++ SE N FIA   S SK++     K     W++ + +DV
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSNSKEVTKREVKGGWNNWRWRTSKDV 345

Query: 332 FENGASFAQIGVGRGGVKPNYNAQQRFPVADAKWLRSLTSSSGALRCSSNSKC 382
           F+NGA F  +  G G +   Y++ QRF VA    + SLT+ +G L C+ N  C
Sbjct: 346 FKNGAYF--VPSGYGSISLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

[Close]

BLAST of Lsi02G000430 vs. ExPASy Swiss-Prot
Match: O65457 (Putative pectate lyase 17 OS=Arabidopsis thaliana OX=3702 GN=At4g22090 PE=3 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 2.2e-85
Identity = 162/353 (45.89%), Postives = 214/353 (60.62%), Query Frame = 0


Query: 32  MNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNMGRNLIRYQVTDPSDDPINPRPGTL 91
           MN +D CWR    W  NR+ LA C+VGF          N+  Y VT+P D+  NP PG+L
Sbjct: 46  MNPVDSCWRLKSDWDVNREDLADCAVGFGSSTLGGKKGNI--YVVTNPYDNAQNPHPGSL 105

Query: 92  RYGATMIKPKVWITFRKDMNIVLKKPLLISSFTAIDGRGATVHITGNACLMVFKATNIII 151
           RYG    KP +WITF KDM I L   L+++S+  IDGRGA V I    C+ +   TN+I+
Sbjct: 106 RYGVIQAKP-LWITFAKDMVITLANELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 152 HGLIIHHCRAQAAGQVMGPNSKIISLGHVDGDAIRLVTASKVWVDHNTLYRCEDGLLDVT 211
           HG+ IH C+   +G+V    + +      DGDAI +  +S VW+DH  L  C DGL+DV 
Sbjct: 166 HGISIHDCKPGKSGKVRSSPTHVGHRKGSDGDAITIFGSSNVWIDHCYLASCTDGLIDVI 225

Query: 212 RGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAH 271
             ST ITISNN+F   DKV+LLGH+D +V+D  M+VTV +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTAITISNNYFTQHDKVMLLGHNDNFVKDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 272 VANNLYQGWTQYAIGGSMNPSVKSEANLFIASK---SKQIIWSTGKVEETKWKFHSVRDV 331
           VANN Y  W  YAIGGS +P++ SE N FIAS    SK++     K     W++ +  DV
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSYSKEVTKREVKGGWNNWRWRTSNDV 345

Query: 332 FENGASFAQIGVGRGGVKPNYNAQQRFPVADAKWLRSLTSSSGALRCSSNSKC 382
           F+NGA F  +  G G +   Y++ QRF VA    + SLT+ +G L C+ N  C
Sbjct: 346 FKNGAFF--VPSGYGSIPLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

[Close]

BLAST of Lsi02G000430 vs. ExPASy Swiss-Prot
Match: P18632 (Pectate lyase 1 OS=Cryptomeria japonica OX=3369 PE=1 SV=3)

HSP 1 Score: 311.6 bits (797), Expect = 1.2e-83
Identity = 165/357 (46.22%), Postives = 214/357 (59.94%), Query Frame = 0


Query: 33  NAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNMGRNLIRYQVTDPSDDPINPRPGTLR 92
           N ID CWR +  W +NR +LA C+VGF        G +L  Y VT+  DDP+NP PGTLR
Sbjct: 23  NPIDSCWRGDSNWAQNRMKLADCAVGFGSSTMGGKGGDL--YTVTNSDDDPVNPAPGTLR 82

Query: 93  YGATMIKPKVWITFRKDMNIVLKKPLLISSFTAIDGRGATVHI-TGNACLMVFKATNIII 152
           YGAT  +P +WI F  +MNI LK P+ I+ +   DGRGA V+I  G  C+ + + +N+II
Sbjct: 83  YGATRDRP-LWIIFSGNMNIKLKMPMYIAGYKTFDGRGAQVYIGNGGPCVFIKRVSNVII 142

Query: 153 HGLIIHHCRAQAAGQVMGPNSKIISLGH-VDGDAIRLVTASKVWVDHNTLYRCEDGLLDV 212
           HGL ++ C     G V+   S  +   H  DGDA+ L TA+ +W+DHN+     DGL+DV
Sbjct: 143 HGLYLYGCSTSVLGNVLINESFGVEPVHPQDGDALTLRTATNIWIDHNSFSNSSDGLVDV 202

Query: 213 TRGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRVTVVYNHFGPNCNQRMPRIRYGYA 272
           T  ST +TISNN F +  KV+LLGHDD Y  D++M+VTV +N FGPNC QRMPR RYG  
Sbjct: 203 TLTSTGVTISNNLFFNHHKVMLLGHDDAYSDDKSMKVTVAFNQFGPNCGQRMPRARYGLV 262

Query: 273 HVANNLYQGWTQYAIGGSMNPSVKSEANLFIA---SKSKQIIWSTG---KVEETKWKFHS 332
           HVANN Y  WT YAIGGS NP++ SE N F A   S  KQ+    G       + W + S
Sbjct: 263 HVANNNYDPWTIYAIGGSSNPTILSEGNSFTAPNESYKKQVTIRIGCKTSSSCSNWVWQS 322

Query: 333 VRDVFENGASFAQIGVGRGGVKPNYNAQQRFPVADAKWLRSLTSSSGALRCSSNSKC 382
            +DVF NGA F   G   GG    Y  ++ F V +      LT ++G L CS + +C
Sbjct: 323 TQDVFYNGAYFVSSGKYEGG--NIYTKKEAFNVENGNATPQLTKNAGVLTCSLSKRC 374

[Close]

BLAST of Lsi02G000430 vs. ExPASy TrEMBL
Match: A0A0A0LPZ1 (Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_1G031910 PE=3 SV=1)

HSP 1 Score: 722.2 bits (1863), Expect = 1.1e-204
Identity = 344/381 (90.29%), Postives = 368/381 (96.59%), Query Frame = 0


Query: 2   TTTQQLFVLSLIS-LTLLSAAVSYSEAHGLKMNAIDRCWRSNPYWRRNRQQLAVCSVGFA 61
           TTTQQL VLSLIS + L+S AVSYSEAHGL MNAIDRCWRSNPYWR+NRQQLA CSVGFA
Sbjct: 4   TTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGFA 63

Query: 62  GKMTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLLI 121
           GKMTNNMGRNL+ YQVTDPSDDPINPRPGTLRYGATMIK KVWITF+KDM+IVL+KPLL+
Sbjct: 64  GKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLV 123

Query: 122 SSFTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGHV 181
           SSFTAIDGRG+TVHITGNACLMV +ATNIIIHGLIIHHC++QAAGQVMGPN+K+ISLG+V
Sbjct: 124 SSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNV 183

Query: 182 DGDAIRLVTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV 241
           DGDAIRLVTASKVW+DHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV
Sbjct: 184 DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV 243

Query: 242 RDRNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF 301
           RDR+MRVTV+YNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF
Sbjct: 244 RDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF 303

Query: 302 IASKSKQIIWSTGKVEETKWKFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPVADA 361
           IASKSKQ+IWSTGKVEE KWKFHSVRD FENGASFA+IGVG+G VKPNYN QQRFPVADA
Sbjct: 304 IASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADA 363

Query: 362 KWLRSLTSSSGALRCSSNSKC 382
           KW+R+LTSSSGALRC+SNSKC
Sbjct: 364 KWIRALTSSSGALRCTSNSKC 384

[Close]

BLAST of Lsi02G000430 vs. ExPASy TrEMBL
Match: A0A1S3AY18 (Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103483978 PE=3 SV=1)

HSP 1 Score: 721.8 bits (1862), Expect = 1.4e-204
Identity = 348/382 (91.10%), Postives = 364/382 (95.29%), Query Frame = 0


Query: 1   MTTTQQLFVLSLIS-LTLLSAAVSYSEAHGLKMNAIDRCWRSNPYWRRNRQQLAVCSVGF 60
           MT TQQL VLSLIS + L+S  VS SEAHGL MNAIDRCWRSNPYWRRNRQQLA CSVGF
Sbjct: 1   MTITQQLSVLSLISFIFLISNVVSSSEAHGLSMNAIDRCWRSNPYWRRNRQQLATCSVGF 60

Query: 61  AGKMTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLL 120
           AGKMTNNMGRNLI YQVTDPSDDPINPRPGTLRYGATMIK KVWITF+KDM+IVL+KPLL
Sbjct: 61  AGKMTNNMGRNLIHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFQKDMHIVLQKPLL 120

Query: 121 ISSFTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGH 180
           ISSFTAIDGRGATVHITGNACLMV +ATNIIIHGLIIHHCR+QAAG+VMGPNSK+ISLGH
Sbjct: 121 ISSFTAIDGRGATVHITGNACLMVLRATNIIIHGLIIHHCRSQAAGEVMGPNSKVISLGH 180

Query: 181 VDGDAIRLVTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGY 240
           VDGDAIRLVTASKVW+DHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGY
Sbjct: 181 VDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGY 240

Query: 241 VRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANL 300
           VRDRNM+VTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANL
Sbjct: 241 VRDRNMKVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANL 300

Query: 301 FIASKSKQIIWSTGKVEETKWKFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPVAD 360
           FIASKSKQ+IWSTG VEE KWKFHSVRDVFENGA F +IGVGRG VKPNYN QQRFPVAD
Sbjct: 301 FIASKSKQVIWSTGNVEEAKWKFHSVRDVFENGALFTEIGVGRGRVKPNYNPQQRFPVAD 360

Query: 361 AKWLRSLTSSSGALRCSSNSKC 382
           AKW+R+LTSSSGALRC+SNSKC
Sbjct: 361 AKWIRALTSSSGALRCTSNSKC 382

[Close]

BLAST of Lsi02G000430 vs. ExPASy TrEMBL
Match: A0A6J1E7R9 (Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111431420 PE=3 SV=1)

HSP 1 Score: 716.8 bits (1849), Expect = 4.6e-203
Identity = 343/376 (91.22%), Postives = 364/376 (96.81%), Query Frame = 0


Query: 6   QLFVLSLISLTLLSAAVSYSEAHGLKMNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTN 65
           QLFVLSLISLTLLS AVSYSE +GLKMNAIDRCWRSNPYWRRNRQQL VCSVGF GKMTN
Sbjct: 5   QLFVLSLISLTLLS-AVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMTN 64

Query: 66  NMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLLISSFTA 125
           N+GRNLIRYQVTDPSDDPINPRPGTLRYGATMIK KVWITF+KDM+I+L KPLLISS+TA
Sbjct: 65  NIGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISSYTA 124

Query: 126 IDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGHVDGDAI 185
           IDGRGA+VHI+GNACL+V KATNIIIHGLIIHHC+AQ AGQVMGPNSK++SLGHVDGDAI
Sbjct: 125 IDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDAI 184

Query: 186 RLVTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRNM 245
           RLV+ASKVW+DHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGH+DGYVRD+NM
Sbjct: 185 RLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRDKNM 244

Query: 246 RVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS 305
           RVTVVYNHFGPNCNQRMPRIR+GYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS
Sbjct: 245 RVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS 304

Query: 306 KQIIWSTGKVEETKWKFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPVADAKWLRS 365
           KQI+WSTGKVE  KWKFHSVRDVFENGASF QIGVGRGGVKPNY+AQQRFPVADAKW+RS
Sbjct: 305 KQIVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKWVRS 364

Query: 366 LTSSSGALRCSSNSKC 382
           LTSSSGALRCSS S+C
Sbjct: 365 LTSSSGALRCSSKSRC 379

[Close]

BLAST of Lsi02G000430 vs. ExPASy TrEMBL
Match: A0A6J1KLU6 (Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111495358 PE=3 SV=1)

HSP 1 Score: 708.4 bits (1827), Expect = 1.7e-200
Identity = 339/376 (90.16%), Postives = 361/376 (96.01%), Query Frame = 0


Query: 6   QLFVLSLISLTLLSAAVSYSEAHGLKMNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTN 65
           QLFVLSLISLTLLS AVSYSE +GLKMNAIDRCWRSNPYWRRNRQQL VCSVGF GKMTN
Sbjct: 5   QLFVLSLISLTLLS-AVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMTN 64

Query: 66  NMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLLISSFTA 125
           N+GRNLIRYQVTDPSDDPINPRPGTLRYGATMIK KVWITF+K M+I+L KPLLISS+TA
Sbjct: 65  NIGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKGMHILLHKPLLISSYTA 124

Query: 126 IDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGHVDGDAI 185
           IDGRGA+VHI+GNACL+V KATNIIIHGLIIHHC+AQ AGQVMGPNSK++SLGHVDGDAI
Sbjct: 125 IDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDAI 184

Query: 186 RLVTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRNM 245
           RLV+ASKVW+DHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGH+DGYVRD+NM
Sbjct: 185 RLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRDKNM 244

Query: 246 RVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS 305
           RVTV+YNHFGPNCNQRMPRIR+GYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK 
Sbjct: 245 RVTVIYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKL 304

Query: 306 KQIIWSTGKVEETKWKFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPVADAKWLRS 365
           KQI+WSTGKVE  KWKFHSV DVFENGASF QIGVGRGGVKPNY+AQQRFPVADAKW+RS
Sbjct: 305 KQIVWSTGKVEAAKWKFHSVGDVFENGASFEQIGVGRGGVKPNYSAQQRFPVADAKWVRS 364

Query: 366 LTSSSGALRCSSNSKC 382
           LTSSSGALRCSS S+C
Sbjct: 365 LTSSSGALRCSSKSRC 379

[Close]

BLAST of Lsi02G000430 vs. ExPASy TrEMBL
Match: A0A5D3BIF3 (Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00620 PE=3 SV=1)

HSP 1 Score: 677.6 bits (1747), Expect = 3.1e-191
Identity = 335/382 (87.70%), Postives = 351/382 (91.88%), Query Frame = 0


Query: 1   MTTTQQLFVLSLIS-LTLLSAAVSYSEAHGLKMNAIDRCWRSNPYWRRNRQQLAVCSVGF 60
           MT TQQL VLSLIS + L+S  VS SEAHGL MNAIDRCWRSNPYWRRNRQQLA CSVGF
Sbjct: 1   MTITQQLSVLSLISFIFLISNVVSSSEAHGLSMNAIDRCWRSNPYWRRNRQQLATCSVGF 60

Query: 61  AGKMTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLL 120
           AGKMTNNMGRNLI YQVTDPSDDPINPRPGTLRYGATMIK KVWITF+KDM+IVL+KPLL
Sbjct: 61  AGKMTNNMGRNLIHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFQKDMHIVLQKPLL 120

Query: 121 ISSFTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGH 180
           ISSFTAIDGRGATVHITGNACLMV +ATNIIIHGLIIHHCR+QAAG+VMGPNSK+ISLGH
Sbjct: 121 ISSFTAIDGRGATVHITGNACLMVLRATNIIIHGLIIHHCRSQAAGEVMGPNSKVISLGH 180

Query: 181 VDGDAIRLVTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGY 240
           VDGDAIRLVTASKVW+DHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGY
Sbjct: 181 VDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGY 240

Query: 241 VRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANL 300
           VRDRNM+V    NH        M RIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANL
Sbjct: 241 VRDRNMKV----NH--------MCRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANL 300

Query: 301 FIASKSKQIIWSTGKVEETKWKFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPVAD 360
           FIASKSKQ+IWSTG VEE KWKFHSVRDVFENGA F +IGVGRG VKPNYN QQRFPVAD
Sbjct: 301 FIASKSKQVIWSTGNVEEAKWKFHSVRDVFENGALFTEIGVGRGRVKPNYNPQQRFPVAD 360

Query: 361 AKWLRSLTSSSGALRCSSNSKC 382
           AKW+R+LTSSSGALRC+SNSKC
Sbjct: 361 AKWIRALTSSSGALRCTSNSKC 370

[Close]

BLAST of Lsi02G000430 vs. NCBI nr
Match: KGN63970.1 (hypothetical protein Csa_014255 [Cucumis sativus])

HSP 1 Score: 722.2 bits (1863), Expect = 2.3e-204
Identity = 344/381 (90.29%), Postives = 368/381 (96.59%), Query Frame = 0


Query: 2   TTTQQLFVLSLIS-LTLLSAAVSYSEAHGLKMNAIDRCWRSNPYWRRNRQQLAVCSVGFA 61
           TTTQQL VLSLIS + L+S AVSYSEAHGL MNAIDRCWRSNPYWR+NRQQLA CSVGFA
Sbjct: 4   TTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGFA 63

Query: 62  GKMTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLLI 121
           GKMTNNMGRNL+ YQVTDPSDDPINPRPGTLRYGATMIK KVWITF+KDM+IVL+KPLL+
Sbjct: 64  GKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLV 123

Query: 122 SSFTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGHV 181
           SSFTAIDGRG+TVHITGNACLMV +ATNIIIHGLIIHHC++QAAGQVMGPN+K+ISLG+V
Sbjct: 124 SSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNV 183

Query: 182 DGDAIRLVTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV 241
           DGDAIRLVTASKVW+DHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV
Sbjct: 184 DGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYV 243

Query: 242 RDRNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF 301
           RDR+MRVTV+YNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF
Sbjct: 244 RDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLF 303

Query: 302 IASKSKQIIWSTGKVEETKWKFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPVADA 361
           IASKSKQ+IWSTGKVEE KWKFHSVRD FENGASFA+IGVG+G VKPNYN QQRFPVADA
Sbjct: 304 IASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADA 363

Query: 362 KWLRSLTSSSGALRCSSNSKC 382
           KW+R+LTSSSGALRC+SNSKC
Sbjct: 364 KWIRALTSSSGALRCTSNSKC 384

[Close]

BLAST of Lsi02G000430 vs. NCBI nr
Match: XP_008439120.1 (PREDICTED: putative pectate lyase 2 [Cucumis melo])

HSP 1 Score: 721.8 bits (1862), Expect = 3.0e-204
Identity = 348/382 (91.10%), Postives = 364/382 (95.29%), Query Frame = 0


Query: 1   MTTTQQLFVLSLIS-LTLLSAAVSYSEAHGLKMNAIDRCWRSNPYWRRNRQQLAVCSVGF 60
           MT TQQL VLSLIS + L+S  VS SEAHGL MNAIDRCWRSNPYWRRNRQQLA CSVGF
Sbjct: 1   MTITQQLSVLSLISFIFLISNVVSSSEAHGLSMNAIDRCWRSNPYWRRNRQQLATCSVGF 60

Query: 61  AGKMTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLL 120
           AGKMTNNMGRNLI YQVTDPSDDPINPRPGTLRYGATMIK KVWITF+KDM+IVL+KPLL
Sbjct: 61  AGKMTNNMGRNLIHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFQKDMHIVLQKPLL 120

Query: 121 ISSFTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGH 180
           ISSFTAIDGRGATVHITGNACLMV +ATNIIIHGLIIHHCR+QAAG+VMGPNSK+ISLGH
Sbjct: 121 ISSFTAIDGRGATVHITGNACLMVLRATNIIIHGLIIHHCRSQAAGEVMGPNSKVISLGH 180

Query: 181 VDGDAIRLVTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGY 240
           VDGDAIRLVTASKVW+DHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGY
Sbjct: 181 VDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGY 240

Query: 241 VRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANL 300
           VRDRNM+VTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANL
Sbjct: 241 VRDRNMKVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANL 300

Query: 301 FIASKSKQIIWSTGKVEETKWKFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPVAD 360
           FIASKSKQ+IWSTG VEE KWKFHSVRDVFENGA F +IGVGRG VKPNYN QQRFPVAD
Sbjct: 301 FIASKSKQVIWSTGNVEEAKWKFHSVRDVFENGALFTEIGVGRGRVKPNYNPQQRFPVAD 360

Query: 361 AKWLRSLTSSSGALRCSSNSKC 382
           AKW+R+LTSSSGALRC+SNSKC
Sbjct: 361 AKWIRALTSSSGALRCTSNSKC 382

[Close]

BLAST of Lsi02G000430 vs. NCBI nr
Match: XP_022923821.1 (putative pectate lyase 2 [Cucurbita moschata])

HSP 1 Score: 716.8 bits (1849), Expect = 9.6e-203
Identity = 343/376 (91.22%), Postives = 364/376 (96.81%), Query Frame = 0


Query: 6   QLFVLSLISLTLLSAAVSYSEAHGLKMNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTN 65
           QLFVLSLISLTLLS AVSYSE +GLKMNAIDRCWRSNPYWRRNRQQL VCSVGF GKMTN
Sbjct: 5   QLFVLSLISLTLLS-AVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMTN 64

Query: 66  NMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLLISSFTA 125
           N+GRNLIRYQVTDPSDDPINPRPGTLRYGATMIK KVWITF+KDM+I+L KPLLISS+TA
Sbjct: 65  NIGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISSYTA 124

Query: 126 IDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGHVDGDAI 185
           IDGRGA+VHI+GNACL+V KATNIIIHGLIIHHC+AQ AGQVMGPNSK++SLGHVDGDAI
Sbjct: 125 IDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDAI 184

Query: 186 RLVTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRNM 245
           RLV+ASKVW+DHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGH+DGYVRD+NM
Sbjct: 185 RLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRDKNM 244

Query: 246 RVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS 305
           RVTVVYNHFGPNCNQRMPRIR+GYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS
Sbjct: 245 RVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS 304

Query: 306 KQIIWSTGKVEETKWKFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPVADAKWLRS 365
           KQI+WSTGKVE  KWKFHSVRDVFENGASF QIGVGRGGVKPNY+AQQRFPVADAKW+RS
Sbjct: 305 KQIVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKWVRS 364

Query: 366 LTSSSGALRCSSNSKC 382
           LTSSSGALRCSS S+C
Sbjct: 365 LTSSSGALRCSSKSRC 379

[Close]

BLAST of Lsi02G000430 vs. NCBI nr
Match: KAG7020030.1 (putative pectate lyase 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 716.8 bits (1849), Expect = 9.6e-203
Identity = 343/376 (91.22%), Postives = 364/376 (96.81%), Query Frame = 0


Query: 6   QLFVLSLISLTLLSAAVSYSEAHGLKMNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTN 65
           QLFVLSLISLTLLS AVSYSE +GLKMNAIDRCWRSNPYWRRNRQQL VCSVGF GKMTN
Sbjct: 5   QLFVLSLISLTLLS-AVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMTN 64

Query: 66  NMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLLISSFTA 125
           N+GRNLIRYQVTDPSDDPINPRPGTLRYGATMIK KVWITF+KDM+I+L KPLLISS+TA
Sbjct: 65  NVGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISSYTA 124

Query: 126 IDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGHVDGDAI 185
           IDGRGA+VHI+GNACL+V KATNIIIHGLIIHHC+AQ AGQVMGPNSK++SLGHVDGDAI
Sbjct: 125 IDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDAI 184

Query: 186 RLVTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRNM 245
           RLV+ASKVW+DHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGH+DGYVRD+NM
Sbjct: 185 RLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRDKNM 244

Query: 246 RVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS 305
           RVTVVYNHFGPNCNQRMPRIR+GYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS
Sbjct: 245 RVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS 304

Query: 306 KQIIWSTGKVEETKWKFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPVADAKWLRS 365
           KQI+WSTGKVE  KWKFHSVRDVFENGASF QIGVGRGGVKPNY+AQQRFPVADAKW+RS
Sbjct: 305 KQIVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKWVRS 364

Query: 366 LTSSSGALRCSSNSKC 382
           LTSSSGALRCSS S+C
Sbjct: 365 LTSSSGALRCSSKSRC 379

[Close]

BLAST of Lsi02G000430 vs. NCBI nr
Match: XP_023520094.1 (putative pectate lyase 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 714.5 bits (1843), Expect = 4.8e-202
Identity = 342/376 (90.96%), Postives = 363/376 (96.54%), Query Frame = 0


Query: 6   QLFVLSLISLTLLSAAVSYSEAHGLKMNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTN 65
           QLFVLSLISLTLLS AVSYSE +GLKMNAIDRCWRSNPYWRRNRQQL VCSVGF GKMTN
Sbjct: 5   QLFVLSLISLTLLS-AVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMTN 64

Query: 66  NMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLLISSFTA 125
           N+GRNLIRYQVTDPSDDPINPRPGTLRYGATM+K KVWITF+KDM+I+L KPLLISS+TA
Sbjct: 65  NVGRNLIRYQVTDPSDDPINPRPGTLRYGATMMKSKVWITFQKDMHILLHKPLLISSYTA 124

Query: 126 IDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGHVDGDAI 185
           IDGRGA+VHI+GNACL+V KATNIIIHGLIIHHC+AQ AGQVMGPNSK++SLGHVDGDAI
Sbjct: 125 IDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDAI 184

Query: 186 RLVTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRNM 245
           RLV+ASKVW+DHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGH+DGYVRD NM
Sbjct: 185 RLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRDMNM 244

Query: 246 RVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS 305
           RVTVVYNHFGPNCNQRMPRIR+GYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS
Sbjct: 245 RVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKS 304

Query: 306 KQIIWSTGKVEETKWKFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPVADAKWLRS 365
           KQI+WSTGKVE  KWKFHSVRDVFENGASF QIGVGRGGVKPNY+AQQRFPVADAKW+RS
Sbjct: 305 KQIVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKWVRS 364

Query: 366 LTSSSGALRCSSNSKC 382
           LTSSSGALRCSS S+C
Sbjct: 365 LTSSSGALRCSSKSRC 379

[Close]

BLAST of Lsi02G000430 vs. TAIR 10
Match: AT5G09280.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 409.1 bits (1050), Expect = 4.0e-114
Identity = 184/255 (72.16%), Postives = 225/255 (88.24%), Query Frame = 0


Query: 63  MTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLLISS 122
           MT N+G+ + +Y+VTDPSDDP+NP+PGTLRYGAT++K K WITF+++M I L KPLLISS
Sbjct: 1   MTGNIGKGVTQYKVTDPSDDPLNPKPGTLRYGATLVKGKKWITFKRNMKIKLHKPLLISS 60

Query: 123 FTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGHVDG 182
           FTA+DGRGA+VHI+G ACL+V++AT++IIHGL IH C+A     VMGP+SKII LGH+DG
Sbjct: 61  FTALDGRGASVHISGPACLIVYRATDVIIHGLKIHDCKAHPPSSVMGPDSKIIQLGHMDG 120

Query: 183 DAIRLVTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRD 242
           DAIRLVTA KVW+DHNTLY CEDGLLDVT GSTD+T+SNNWFR+QDKV+LLGHDDGYV+D
Sbjct: 121 DAIRLVTAKKVWIDHNTLYDCEDGLLDVTLGSTDVTVSNNWFRNQDKVMLLGHDDGYVKD 180

Query: 243 RNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIA 302
           ++MRVTVV+NHFGPNCNQRMPR+R+GYAHVANN YQGWTQYAIGGSM+P VKSE+N F+A
Sbjct: 181 KDMRVTVVFNHFGPNCNQRMPRVRHGYAHVANNYYQGWTQYAIGGSMSPRVKSESNYFVA 240

Query: 303 SK--SKQIIWSTGKV 316
            K  SK+++   G +
Sbjct: 241 PKSGSKEVLEKHGPI 255

[Close]

BLAST of Lsi02G000430 vs. TAIR 10
Match: AT1G11920.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 334.0 bits (855), Expect = 1.6e-91
Identity = 174/384 (45.31%), Postives = 236/384 (61.46%), Query Frame = 0


Query: 7   LFVLSLISLTLLSAAVSYSEAHG-----LKMNAIDRCWRSNPYWRRNRQQLAVCSVGFAG 66
           L ++SL+     S+ V  + ++G     L  N ID CWR NPYW  NR+ LA C+VGF  
Sbjct: 6   LTIISLLFAAFSSSVVEAAYSNGYTIPKLLPNPIDSCWRRNPYWASNRRALADCAVGFGK 65

Query: 67  KMTNNMGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLLIS 126
                 G+    Y VT+PSDDP NPRPGTLRY     KP +WITF +DM IVL+  L+++
Sbjct: 66  SAVG--GKYGSIYVVTNPSDDPENPRPGTLRYAVIQSKP-LWITFARDMVIVLRNELIMN 125

Query: 127 SFTAIDGRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGHVD 186
           S+  IDGRGA V I    C+ +   +++IIHG+ IH C+   +G+V    + + S    D
Sbjct: 126 SYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRSSPTHVGSRKGSD 185

Query: 187 GDAIRLVTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVR 246
           GDAI +  +S +W+DH    RC+DGL+DV   ST +TISNN+F   DKV+LLGH+D  V 
Sbjct: 186 GDAIAIFDSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDNNVE 245

Query: 247 DRNMRVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFI 306
           D+ MRVT+ +NHFGP   +RMPR+R GYAHVANN Y+ W  YAIGGS +P++ SE N F+
Sbjct: 246 DKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSADPTIFSEGNYFV 305

Query: 307 ASKSKQIIWSTGKVEE----TKWKFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPV 366
           AS        T +++      +WK+ + +DVF+NGA F  +  G G V P Y   +RFPV
Sbjct: 306 ASDDPSKKQVTKRIDSGYDWKRWKWRTSKDVFKNGAYF--VPSGYGTVTPLYGRAERFPV 365

Query: 367 ADAKWLRSLTSSSGALRCSSNSKC 382
           +    +  LTSS+G L C S   C
Sbjct: 366 SHGSLVPLLTSSAGPLHCYSGRIC 384

[Close]

BLAST of Lsi02G000430 vs. TAIR 10
Match: AT1G30350.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 323.6 bits (828), Expect = 2.2e-88
Identity = 177/378 (46.83%), Postives = 231/378 (61.11%), Query Frame = 0


Query: 9   VLSLISLTLLSAAVSYS-EAHGLKMNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNM 68
           +L+  +  LL  A SY+  A  + +N ID CWR NP W  NRQ LA C+VG+ GK     
Sbjct: 11  LLAAFASPLLETAHSYNVTAPRVSLNPIDACWRRNPKWATNRQALAHCAVGY-GKAAIG- 70

Query: 69  GRNLIRYQVTDPSDDPINPRPGTLRYGATMIKPKVWITFRKDMNIVLKKPLLISSFTAID 128
           G+N   Y VT+PSD+P  P PGTLRY  +  KP +WITF +DM IVLK  L+I+S+  ID
Sbjct: 71  GKNGPIYVVTNPSDNPTRPSPGTLRYAVSQPKP-LWITFARDMVIVLKSQLMINSYKTID 130

Query: 129 GRGATVHITGNACLMVFKATNIIIHGLIIHHCRAQAAGQVMGPNSKIISLGHVDGDAIRL 188
           GRGA V I    CL + +  ++IIHG+ IH C+A   G              +DGD IR+
Sbjct: 131 GRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNG--------------MDGDGIRV 190

Query: 189 VTASKVWVDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRV 248
             ++ VW+DH  L RC DGL+DV   ST +TISNN+F   DKV+LLGHDD Y+ D++MRV
Sbjct: 191 FQSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSYMGDKDMRV 250

Query: 249 TVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKSKQ 308
           T+ +N FGP   +RMPR+R GYAHVANN Y+ W  YAIGGS NP + SE N F+A + + 
Sbjct: 251 TIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNYFVAPEKRS 310

Query: 309 IIWSTGKV----EETKWKFHSVRDVFENGASFAQIGVGRGGVKPNYNAQQRFPVADAKWL 368
               T ++    +  +WK+ + RDVF NGA F   GV    V+P Y   + F VA    +
Sbjct: 311 SKQVTKRMMAGPDSKRWKWGTSRDVFMNGAFFGPPGV---IVRPLYKGGEGFRVAHGSLV 368

Query: 369 RSLTSSSGALRCSSNSKC 382
            SLTSS+G LRC     C
Sbjct: 371 PSLTSSAGPLRCYVGRIC 368

[Close]

BLAST of Lsi02G000430 vs. TAIR 10
Match: AT4G22080.1 (root hair specific 14 )

HSP 1 Score: 318.2 bits (814), Expect = 9.2e-87
Identity = 162/353 (45.89%), Postives = 214/353 (60.62%), Query Frame = 0


Query: 32  MNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNMGRNLIRYQVTDPSDDPINPRPGTL 91
           MN +D CWR    W  NR+ LA C VGF          NL  Y VT+P D+  NP+PG+L
Sbjct: 46  MNPVDSCWRLKSDWAANRKDLADCVVGFGSSTLGGKKGNL--YVVTNPYDNAQNPQPGSL 105

Query: 92  RYGATMIKPKVWITFRKDMNIVLKKPLLISSFTAIDGRGATVHITGNACLMVFKATNIII 151
           RYG    KP +WITF KDM I L+  L+++S+  IDGRGA V I    C+ +   TN+I+
Sbjct: 106 RYGVIQAKP-LWITFAKDMVITLENELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 152 HGLIIHHCRAQAAGQVMGPNSKIISLGHVDGDAIRLVTASKVWVDHNTLYRCEDGLLDVT 211
           HG+ IH C+    G V    + +      DGDAI +  +S +W+DH  L  C DGL+DV 
Sbjct: 166 HGISIHDCKPGKYGMVRSSPTHVGHRKGSDGDAIAIFGSSNIWIDHCYLASCTDGLIDVI 225

Query: 212 RGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAH 271
             ST ITISNN+F   DKV+LLGH+D +V+D  M+VTV +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTGITISNNYFTQHDKVMLLGHNDDFVQDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 272 VANNLYQGWTQYAIGGSMNPSVKSEANLFIA---SKSKQIIWSTGKVEETKWKFHSVRDV 331
           VANN Y  W  YAIGGS +P++ SE N FIA   S SK++     K     W++ + +DV
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSNSKEVTKREVKGGWNNWRWRTSKDV 345

Query: 332 FENGASFAQIGVGRGGVKPNYNAQQRFPVADAKWLRSLTSSSGALRCSSNSKC 382
           F+NGA F  +  G G +   Y++ QRF VA    + SLT+ +G L C+ N  C
Sbjct: 346 FKNGAYF--VPSGYGSISLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

[Close]

BLAST of Lsi02G000430 vs. TAIR 10
Match: AT4G22090.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 317.4 bits (812), Expect = 1.6e-86
Identity = 162/353 (45.89%), Postives = 214/353 (60.62%), Query Frame = 0


Query: 32  MNAIDRCWRSNPYWRRNRQQLAVCSVGFAGKMTNNMGRNLIRYQVTDPSDDPINPRPGTL 91
           MN +D CWR    W  NR+ LA C+VGF          N+  Y VT+P D+  NP PG+L
Sbjct: 46  MNPVDSCWRLKSDWDVNREDLADCAVGFGSSTLGGKKGNI--YVVTNPYDNAQNPHPGSL 105

Query: 92  RYGATMIKPKVWITFRKDMNIVLKKPLLISSFTAIDGRGATVHITGNACLMVFKATNIII 151
           RYG    KP +WITF KDM I L   L+++S+  IDGRGA V I    C+ +   TN+I+
Sbjct: 106 RYGVIQAKP-LWITFAKDMVITLANELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 152 HGLIIHHCRAQAAGQVMGPNSKIISLGHVDGDAIRLVTASKVWVDHNTLYRCEDGLLDVT 211
           HG+ IH C+   +G+V    + +      DGDAI +  +S VW+DH  L  C DGL+DV 
Sbjct: 166 HGISIHDCKPGKSGKVRSSPTHVGHRKGSDGDAITIFGSSNVWIDHCYLASCTDGLIDVI 225

Query: 212 RGSTDITISNNWFRDQDKVILLGHDDGYVRDRNMRVTVVYNHFGPNCNQRMPRIRYGYAH 271
             ST ITISNN+F   DKV+LLGH+D +V+D  M+VTV +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTAITISNNYFTQHDKVMLLGHNDNFVKDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 272 VANNLYQGWTQYAIGGSMNPSVKSEANLFIASK---SKQIIWSTGKVEETKWKFHSVRDV 331
           VANN Y  W  YAIGGS +P++ SE N FIAS    SK++     K     W++ +  DV
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSYSKEVTKREVKGGWNNWRWRTSNDV 345

Query: 332 FENGASFAQIGVGRGGVKPNYNAQQRFPVADAKWLRSLTSSSGALRCSSNSKC 382
           F+NGA F  +  G G +   Y++ QRF VA    + SLT+ +G L C+ N  C
Sbjct: 346 FKNGAFF--VPSGYGSIPLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

The following BLAST results are available for this feature:

BLAST of Lsi02G000430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65388	2.3e-90	45.31	Putative pectate lyase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g11920 PE=3 SV=2	[more]
Q9C8G4	3.1e-87	46.83	Probable pectate lyase 4 OS=Arabidopsis thaliana OX=3702 GN=At1g30350 PE=2 SV=1	[more]
O65456	1.3e-85	45.89	Probable pectate lyase 16 OS=Arabidopsis thaliana OX=3702 GN=At4g22080 PE=2 SV=1	[more]
O65457	2.2e-85	45.89	Putative pectate lyase 17 OS=Arabidopsis thaliana OX=3702 GN=At4g22090 PE=3 SV=1	[more]
P18632	1.2e-83	46.22	Pectate lyase 1 OS=Cryptomeria japonica OX=3369 PE=1 SV=3	[more]

BLAST of Lsi02G000430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPZ1	1.1e-204	90.29	Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_1G031910 PE=3 SV=1	[more]
A0A1S3AY18	1.4e-204	91.10	Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103483978 PE=3 SV=1	[more]
A0A6J1E7R9	4.6e-203	91.22	Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111431420 PE=3 SV=1	[more]
A0A6J1KLU6	1.7e-200	90.16	Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111495358 PE=3 SV=1	[more]
A0A5D3BIF3	3.1e-191	87.70	Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00620 ...	[more]

BLAST of Lsi02G000430 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN63970.1	2.3e-204	90.29	hypothetical protein Csa_014255 [Cucumis sativus]	[more]
XP_008439120.1	3.0e-204	91.10	PREDICTED: putative pectate lyase 2 [Cucumis melo]	[more]
XP_022923821.1	9.6e-203	91.22	putative pectate lyase 2 [Cucurbita moschata]	[more]
KAG7020030.1	9.6e-203	91.22	putative pectate lyase 2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023520094.1	4.8e-202	90.96	putative pectate lyase 2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi02G000430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09280.1	4.0e-114	72.16	Pectin lyase-like superfamily protein	[more]
AT1G11920.1	1.6e-91	45.31	Pectin lyase-like superfamily protein	[more]
AT1G30350.1	2.2e-88	46.83	Pectin lyase-like superfamily protein	[more]
AT4G22080.1	9.2e-87	45.89	root hair specific 14	[more]
AT4G22090.1	1.6e-86	45.89	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 381..381
None	No IPR available	PANTHER	PTHR31683:SF74	PECTATE LYASE	coord: 16..378
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 55..72 score: 22.75 coord: 261..280 score: 62.62 coord: 181..202 score: 44.37 coord: 283..302 score: 58.57 coord: 117..133 score: 50.7 coord: 352..375 score: 30.36
IPR002022	Pectate lyase	SMART	SM00656	amb_all	coord: 109..306 e-value: 3.0E-69 score: 246.0
IPR002022	Pectate lyase	PFAM	PF00544	Pectate_lyase_4	coord: 122..300 e-value: 1.5E-24 score: 86.8
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 32..374 e-value: 3.3E-94 score: 317.7
IPR045032	Pectin lyase family	PANTHER	PTHR31683	PECTATE LYASE 18-RELATED	coord: 16..378
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 32..372

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G000430.1	Lsi02G000430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045490	pectin catabolic process
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0030570	pectate lyase activity