Lsi02G000400 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G000400
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Nucleotide-diphospho-sugar transferase family protein
Location	chr02: 397999 .. 402691 (-)
RNA-Seq Expression	Lsi02G000400
Synteny	Lsi02G000400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAAGAGACAAATTAAGGAGGGGAGGGACCAGACAAAGAAATTATGAAATAAAGAAAGGGGCAGCCGGCAATAAATTTAAAACTCTCTCTCGTATTAATATCTTCGCCCACTGCGTCTCTTCCTCTCCTCTCTTTTACAGATTAACCCCTTTTTTAGTTCAAGTTTTATTTCTTCACCCTCTCTGACGTCAACATGAAAATAACGCCATATTTCTTCTTCTTCTTCTTCTTCTTATTCTTATACCTCTTTTCATCATCTAATTCCCAGCGCCTGCGAGTCAACCATTACGCTCGTCTTATAACCAATTAAAACTTTCCTCTTTTCCTCTTTGCCTCCGCCTCCTCACAGTTTCAGCTTCCAATGAAGAATAATTCCGCCGCCGACGGCGAACCCGCCGCCAAGTTGTCGGCTCCCTCGGCCGTTCATACGGCGGTGGTTCCGTGGAGGACGGTGAGGATCTCCGTTGTGTTCGTTGGCGTTGTGTTGGGCCTCCTTGTTCTGTACAACTCAGCCATTAATCCTTTCAAATTTCTTCCTGTTTCCTACACCTACCGCGCTTTTCGATCCTCTTCTCCTCACAGAGATCTTCTTTTGGTTAGTTTCCATTTCTTATCACTCTTTTTTTTTTTTTTCTTTTTTCCTTTATTCATTTCAATTACCGAATTGCGTATTTGTTTAATTTTTGTTTAATTAAGGTTGATTGTGTTTACGAGTAAAATCTGAATTAAACGGAAAATAGTTCTTGCTTCTTAATTGTGACAAACGCGATTCTGGAGTCCTAGGATTGACGAATAAATCGAAGAGAGCCAGCTGGGCTTTTGTTTGTGAATTAATATATAATATTTTTATTTAAAGTAAAGGCTGCATCTGCTGCAGTTCTTTAATGGATCATTTAATAATTTTTCCTTATATAAGTTTTATAAACGCACACACAAAATAATTTTAAAAAAGGAATACAAAACGCACAATTATTGGGTGAATATCATGGTAAGTTGGCGATAGGCTTATTAGCCGGCTGGTCATCTGCAGTGCCAGCGCGTCAGTCGCACGTGCATTTATTATCATTTCTCTTTTTTATTTATATATTACTTTTTACCGGGTTCAAAAAGATAGAAAAAGATATTTATATTTCAACTTTGATGTTTTAATTTGATGTTTAGTCTGATAATTTTCTAGGTTAAAATGTCATTGACATTTTCGTCTCTTACCAATTTTTAATTGTTCAATTTGCTAATTTATTATCAATTTTTTTAAGAACTTTTTATTATCTGTAGTATTCTTTGGATAAATTTTAAAAATATATTCACATATTTTATTTTCTTACATAAAAATTATTGTTATTATTATTTAATCGATTTTGGTAAAAATTATTTTTGAAGGACTAAATTTTAAGATTTATTGATATTTTAAAATTGAACAAACTTCATAGTATGGAACCAAAATGGTATTTTAACCTATATTTATTTACTATACACAAAATTGAAATTTTATTAGGCAAAATTTTTATTTGTTTTCAAATAGATCAATTAATTTTTTAAACTTTTAAATTTGTAAGGTCCTATTTAATACAAAGTTGAAAACTAAGTACTTAGTACACTCAAAAATTAAAATTTAAAAGACTTATTAAACACTTTAAAATAGATAAAAACTTCAAAATTTAAGAAATAAACTTATTAGGTTGGAAAATTTATTTTCCAAGTGAAAACATTTTATATCACTTCTAGAAAGTCTATGAAATAAAATAGCAATAATTTATCATTTATCAATTTGAAAAGTAAAAGTGTGATTAAATTATAAGTATAGTCTTAGAGTTGTGTTTATTATAAAATTTAGATTAGTTGTAGAGTTGACGAAATAAAATAACAAGTTATGATTTTATGAATTTGAAAAGTAAAAATATAATTAAATTATGTTTTTAAGTATTGGGATATGAAGCAGTAGGAGTGGGGAAAGGCAAGGGCGAAGGGGACAGGATTTTACAAAGGAAAGTGGGGGATTGTGGTGTAATTATATGTTTCTGTCACAAAGTCCAACAATATTTTCCCCTATATAAAAACAATTTCCTCCTCTTTCGCACTGCTCTGCTCATAATACATGGTGGGGTCTGACGTGTATTATATATATATATATTTAAAATACCACCATTCAAATAAAGGAATGTGTGTATATGGTTTCTAAGAAATTTTGAAGAAACTTGCTCTAAATCATTTTTCTTTCTCAAACATTCTTTTTTTTTTTTGAGAATTTAAAAAAATAGAAAAATAAGAAAAATTTTAGATAGTTGTCACAGATGCTAATAGAAATCTATCAGAGTCTATAAGTGTTTTTTTTTTTTTTACTATTTTCTGTAAATAGTTTGACATTTTTTCTATCTGTGATTTATTTTTTTTAGTCAAATCCTTTAAAATTAGGTTAGGTTTAGGAGTAATTTTTGAATAGTTAATTCTTTGGGAAATTTTCACAGATAGAAAATATATATAACTATTTACAAAAAATAGCAAAAAAAAAATACTGATAGATATTGATAGACTTCTATCAACATCTATCAGGACTTCTATCATTTCTAATAGTCTTCTATCTGCGTCTATCACAACTATCTAAAAATTTTGCTATTTTGTATAAATTATTTCCCTTATTTTTCTATTTTTAAAAATTTTCCTAATTTTTTTAATCATTCAAAATAAGTTTAATATTTAATTTTACACTCCATAAATAAAAAAATTCACAAAACATGCTTTGAAGTGATTTAAAATATCACACAAATGATATTGACTATTTTCTAAATCATTCTTAAATATGTTATTTTTTGGTCCCTATATTTAAGGTCAAGTTTTCCTTTAGTCCCTAAATTTTAAAATGCTACATATTTAGTCTTTAAATTTTGAATTGGTTTTAATTTAGTCATTCGAGTTCAAAATGTTTCAATTTTAAATCTAAAAAAGCATTCCACTCCCCCCTAGATTAAGCTAAAAGTGTAGAAATGTATGTTCTAACTTTTTTTAATACAACAATAACAAAGAGAAATATCGTATCAATTAGGTTAACCTCACTTTCACAAGTATTTTTCTAATTGAATAATACTAACCAAGTTCAAGTTTATTTTACTAAATTAACAAATAAAGTATTCCGACATATTTATTGATATCTCCCACAAATGTTTGGGCTTAATGTTTACTTTGAACATGAATATACCTACATTCCCCAACCCTTTCTTTATTGATACCAAATTCTAAAATCATCGGACCCTTTTGAAATTTAAAAAAAAGTTATACTTATGGCGCATTTTATGTTGAATGAAACAGAGTATAATGTAAAATCATGTTAATTAAAACTTATAAAAGTTTGTAAAATGACAAAAATGAAATATAGGAAAAAGTTCTGAAAGAAGCAGCAATGGAAGATGGAACAATAATCTTGACGACGTTGAATGATGCATGGGCAGAGCCAGATTCCCTCCTCGATCTGTTTCTTAAAAGCTTCCACATTGGAAACGGTACTCAAAGATTATTGAAGCACTTAGTCATAGTCACGTTGGACCAAAAAGCGTATTCTCGTTGCCTGGCATTGCACCCTCATTGCTATGAATTGGAAACTCAAGGAACCAACTTCTCCAGCGAAGCCTACTTCATGACCTCTGATTACTTGAAAATGATGTGGCGAAGAATTGAATTTCTCATCTCTGTTCTCGAGATGGGTTACAGTTTCGTATTCACTGTAAGTTAGTCACGGTTAGCTTAAACTTTTTGGTTAATCGTTGATTTAAAATGGTGTTAAAGCTTCTGAATAATGCAGGATTCTGATATAATGTGGCTGCAAGACCCATTCAATCACTTCTACCCAGAGGCAGATTTTCAAATTGCTTGCGATATGTTTTTGGGGAACTCGGAAGATTTAAACAACACTCCCAATGGAGGGTTTGTGTACGTGAAAGCGAATCCAAAAACAGTAAAATTCTACAAGTTTTGGTACCAATCAAGGACAATATATCCAGGACAGCACGACCAAGATGTGCTGAACAAGATCAAACACAGTCCATTGATCTCTAAAATTGGGCTGAAATTAAGGTTTCTGGACACTGCGAATTTCGGAGGGTTCTGTCAAATGGGGAGGGACATGAACAAGATGGCTACAGTGCATGCCAATTGCTGCGTTGGACTAGAGAACAAAGTTCACGATCTCAGGATTTTGCTTCAAGATTGGAATAACTTTTTTAACCGAACTGCAGATAATAAAGCTTCCTCAACCCCTTCATGGACTGTTCCTCAAGATTGCAGGTATATATATACATTATTATATGCTTTCTTTCTAGCCAATTATAATAATTTATATATGCAAAATCTTTACTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAATTAGAGTTATTAATATTTTTGGATGGCAAATTCAGAACTTCATTTCAAAGAGGGAGGCAACGGAAAGACAGTAAGAAAACTGGGAACAGAAGGTTATCATCATAGGAAGCCTAAATTGGTATGATGATTTGAAGAGAAAGGAACAAATTAAAATGTGTTGCAATCGCTCCTGCTGGATAAAATTTGCTTCGAATGAAATGGTTGCATTCTCTTTTCGATTTTTTAGTACACAATTTTTCTGTACATTGTTAAAAAGCCAAGAAGAATGAAATATTGCTCTCTTTTTTTCGTTT

mRNA sequence

AAAAAAAAAAAAGAGACAAATTAAGGAGGGGAGGGACCAGACAAAGAAATTATGAAATAAAGAAAGGGGCAGCCGGCAATAAATTTAAAACTCTCTCTCGTATTAATATCTTCGCCCACTGCGTCTCTTCCTCTCCTCTCTTTTACAGATTAACCCCTTTTTTAGTTCAAGTTTTATTTCTTCACCCTCTCTGACGTCAACATGAAAATAACGCCATATTTCTTCTTCTTCTTCTTCTTCTTATTCTTATACCTCTTTTCATCATCTAATTCCCAGCGCCTGCGAGTCAACCATTACGCTCGTCTTATAACCAATTAAAACTTTCCTCTTTTCCTCTTTGCCTCCGCCTCCTCACAGTTTCAGCTTCCAATGAAGAATAATTCCGCCGCCGACGGCGAACCCGCCGCCAAGTTGTCGGCTCCCTCGGCCGTTCATACGGCGGTGGTTCCGTGGAGGACGGTGAGGATCTCCGTTGTGTTCGTTGGCGTTGTGTTGGGCCTCCTTGTTCTGTACAACTCAGCCATTAATCCTTTCAAATTTCTTCCTGTTTCCTACACCTACCGCGCTTTTCGATCCTCTTCTCCTCACAGAGATCTTCTTTTGGAAAAAGTTCTGAAAGAAGCAGCAATGGAAGATGGAACAATAATCTTGACGACGTTGAATGATGCATGGGCAGAGCCAGATTCCCTCCTCGATCTGTTTCTTAAAAGCTTCCACATTGGAAACGGTACTCAAAGATTATTGAAGCACTTAGTCATAGTCACGTTGGACCAAAAAGCGTATTCTCGTTGCCTGGCATTGCACCCTCATTGCTATGAATTGGAAACTCAAGGAACCAACTTCTCCAGCGAAGCCTACTTCATGACCTCTGATTACTTGAAAATGATGTGGCGAAGAATTGAATTTCTCATCTCTGTTCTCGAGATGGGTTACAGTTTCGTATTCACTGTAAGTTAGTCACGGTTAGCTTAAACTTTTTGGTTAATCGTTGATTTAAAATGGTGTTAAAGCTTCTGAATAATGCAGGATTCTGATATAATGTGGCTGCAAGACCCATTCAATCACTTCTACCCAGAGGCAGATTTTCAAATTGCTTGCGATATGTTTTTGGGGAACTCGGAAGATTTAAACAACACTCCCAATGGAGGGTTTGTGTACGTGAAAGCGAATCCAAAAACAGTAAAATTCTACAAGTTTTGGTACCAATCAAGGACAATATATCCAGGACAGCACGACCAAGATGTGCTGAACAAGATCAAACACAGTCCATTGATCTCTAAAATTGGGCTGAAATTAAGGTTTCTGGACACTGCGAATTTCGGAGGGTTCTGTCAAATGGGGAGGGACATGAACAAGATGGCTACAGTGCATGCCAATTGCTGCGTTGGACTAGAGAACAAAGTTCACGATCTCAGGATTTTGCTTCAAGATTGGAATAACTTTTTTAACCGAACTGCAGATAATAAAGCTTCCTCAACCCCTTCATGGACTGTTCCTCAAGATTGCAGAACTTCATTTCAAAGAGGGAGGCAACGGAAAGACAGTAAGAAAACTGGGAACAGAAGGTTATCATCATAGGAAGCCTAAATTGGTATGATGATTTGAAGAGAAAGGAACAAATTAAAATGTGTTGCAATCGCTCCTGCTGGATAAAATTTGCTTCGAATGAAATGGTTGCATTCTCTTTTCGATTTTTTAGTACACAATTTTTCTGTACATTGTTAAAAAGCCAAGAAGAATGAAATATTGCTCTCTTTTTTTCGTTT

Coding sequence (CDS)

ATGAAGAATAATTCCGCCGCCGACGGCGAACCCGCCGCCAAGTTGTCGGCTCCCTCGGCCGTTCATACGGCGGTGGTTCCGTGGAGGACGGTGAGGATCTCCGTTGTGTTCGTTGGCGTTGTGTTGGGCCTCCTTGTTCTGTACAACTCAGCCATTAATCCTTTCAAATTTCTTCCTGTTTCCTACACCTACCGCGCTTTTCGATCCTCTTCTCCTCACAGAGATCTTCTTTTGGAAAAAGTTCTGAAAGAAGCAGCAATGGAAGATGGAACAATAATCTTGACGACGTTGAATGATGCATGGGCAGAGCCAGATTCCCTCCTCGATCTGTTTCTTAAAAGCTTCCACATTGGAAACGGTACTCAAAGATTATTGAAGCACTTAGTCATAGTCACGTTGGACCAAAAAGCGTATTCTCGTTGCCTGGCATTGCACCCTCATTGCTATGAATTGGAAACTCAAGGAACCAACTTCTCCAGCGAAGCCTACTTCATGACCTCTGATTACTTGAAAATGATGTGGCGAAGAATTGAATTTCTCATCTCTGTTCTCGAGATGGGTTACAGTTTCGTATTCACTGTAAGTTAG

Protein sequence

MKNNSAADGEPAAKLSAPSAVHTAVVPWRTVRISVVFVGVVLGLLVLYNSAINPFKFLPVSYTYRAFRSSSPHRDLLLEKVLKEAAMEDGTIILTTLNDAWAEPDSLLDLFLKSFHIGNGTQRLLKHLVIVTLDQKAYSRCLALHPHCYELETQGTNFSSEAYFMTSDYLKMMWRRIEFLISVLEMGYSFVFTVS

Homology

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BLAST of Lsi02G000400 vs. ExPASy Swiss-Prot
Match: P0C042 (Uncharacterized protein At4g15970 OS=Arabidopsis thaliana OX=3702 GN=At4g15970 PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.7e-36
Identity = 70/118 (59.32%), Postives = 94/118 (79.66%), Query Frame = 0


Query: 78  LEKVLKEAAMEDGTIILTTLNDAWAEPDSLLDLFLKSFHIGNGTQRLLKHLVIVTLDQKA 137
           L K+L EAA ED T+I+TTLN AW+EP+S  DLFL SFH+G GT+ LL+HLV+  LD++A
Sbjct: 42  LGKILTEAATEDKTVIITTLNKAWSEPNSTFDLFLHSFHVGKGTKPLLRHLVVACLDEEA 101

Query: 138 YSRCLALHPH-CYELETQGTNFSSEAYFMTSDYLKMMWRRIEFLISVLEMGYSFVFTV 195
           YSRC  +HPH CY ++T G +F+ +  FMT DYLKMMWRRIEFL ++L++ Y+F+FT+
Sbjct: 102 YSRCSEVHPHRCYFMKTPGIDFAGDKMFMTPDYLKMMWRRIEFLGTLLKLRYNFIFTI 159

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BLAST of Lsi02G000400 vs. ExPASy Swiss-Prot
Match: Q3E6Y3 (Uncharacterized protein At1g28695 OS=Arabidopsis thaliana OX=3702 GN=At1g28695 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.3e-20
Identity = 49/114 (42.98%), Postives = 73/114 (64.04%), Query Frame = 0


Query: 85  AAMEDGTIILTTLNDAWAEP----DSLLDLFLKSFHIGNGTQRLLKHLVIVTLDQKAYSR 144
           AA  + T+I+T +N A+ +      ++LDLFL+SF  G GT  LL HL++V +DQ AY R
Sbjct: 53  AAGNNKTVIITMVNKAYVKEVGRGSTMLDLFLESFWEGEGTLPLLDHLMVVAVDQTAYDR 112

Query: 145 CLALHPHCYELETQ-GTNFSSEAYFMTSDYLKMMWRRIEFLISVLEMGYSFVFT 194
           C     HCY++ET+ G +   E  FM+ D+++MMWRR   ++ VL  GY+ +FT
Sbjct: 113 CRFKRLHCYKMETEDGVDLEGEKVFMSKDFIEMMWRRTRLILDVLRRGYNVIFT 166

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BLAST of Lsi02G000400 vs. ExPASy TrEMBL
Match: A0A1S3AWN4 (Glycosyltransferase OS=Cucumis melo OX=3656 GN=LOC103483692 PE=3 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.1e-86
Identity = 167/195 (85.64%), Postives = 178/195 (91.28%), Query Frame = 0


Query: 3   NNSAADGEPAAKLSAPSAV----HTAVVPWRTVRISVVFVGVVLGLLVLYNSAINPFKFL 62
           NNSAADGE A KLS PS V     T+VV WRTVR+SVV VGV LGL VLYNSAINPFKFL
Sbjct: 4   NNSAADGEQAGKLSVPSVVPTTTTTSVVTWRTVRVSVVLVGVTLGLFVLYNSAINPFKFL 63

Query: 63  PVSYTYRAFRSSSPHRDLLLEKVLKEAAMEDGTIILTTLNDAWAEPDSLLDLFLKSFHIG 122
           PVSYTYRAFR SSPH+D +LEKV+KEAAMEDGTII+TTLNDAWAEPDSL DLFLKSFH+G
Sbjct: 64  PVSYTYRAFRFSSPHKDPILEKVVKEAAMEDGTIIITTLNDAWAEPDSLFDLFLKSFHVG 123

Query: 123 NGTQRLLKHLVIVTLDQKAYSRCLALHPHCYELETQGTNFSSEAYFMTSDYLKMMWRRIE 182
           NGTQRLLKHLVIVTLDQKAYSRC+ALHPHCY+L+TQGTNFSSEAYFMTSDYLKMMWRRIE
Sbjct: 124 NGTQRLLKHLVIVTLDQKAYSRCVALHPHCYQLDTQGTNFSSEAYFMTSDYLKMMWRRIE 183

Query: 183 FLISVLEMGYSFVFT 194
           FLI VLEMG+SFVFT
Sbjct: 184 FLIYVLEMGHSFVFT 198

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BLAST of Lsi02G000400 vs. ExPASy TrEMBL
Match: A0A0A0LT78 (Glycosyltransferase OS=Cucumis sativus OX=3659 GN=Csa_1G031880 PE=3 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.5e-85
Identity = 165/194 (85.05%), Postives = 175/194 (90.21%), Query Frame = 0


Query: 1   MKNNSAADG-EPAAKLSAPSAVHTAVVPWRTVRISVVFVGVVLGLLVLYNSAINPFKFLP 60
           MKNNSA DG E A KLSAPS   T    WRTVR+SVV VGV LGL VLYNSAINPFKFLP
Sbjct: 1   MKNNSAVDGEEQAGKLSAPSVAPTTGATWRTVRVSVVLVGVTLGLFVLYNSAINPFKFLP 60

Query: 61  VSYTYRAFRSSSPHRDLLLEKVLKEAAMEDGTIILTTLNDAWAEPDSLLDLFLKSFHIGN 120
            SY YRAFR SSPH+D +LEKV+KEAAMEDGTIILTTLNDAWAEPDSLLDLFLKSFHIGN
Sbjct: 61  ASYAYRAFRFSSPHKDPILEKVVKEAAMEDGTIILTTLNDAWAEPDSLLDLFLKSFHIGN 120

Query: 121 GTQRLLKHLVIVTLDQKAYSRCLALHPHCYELETQGTNFSSEAYFMTSDYLKMMWRRIEF 180
           GTQRLLKHLVIVTLDQKAYSRC+A+HPHCY+L+TQGTNFSSEAYFMT+DYLKMMWRRIEF
Sbjct: 121 GTQRLLKHLVIVTLDQKAYSRCVAVHPHCYQLDTQGTNFSSEAYFMTADYLKMMWRRIEF 180

Query: 181 LISVLEMGYSFVFT 194
           LI VLEMG+SFVFT
Sbjct: 181 LIYVLEMGHSFVFT 194

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BLAST of Lsi02G000400 vs. ExPASy TrEMBL
Match: A0A6J1KAZ2 (Glycosyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111493282 PE=3 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 6.9e-70
Identity = 140/191 (73.30%), Postives = 159/191 (83.25%), Query Frame = 0


Query: 5   SAADGEPAAKLSAPSAVHTAVVPWRTVRISVVFVGVVLGLLVLYNSAINPFKFLPVSYTY 64
           S+ D +P    +AP + HTAVV W+TVR+SV F GV+LGLLVLYNSAINPF  LPVSY+Y
Sbjct: 4   SSGDVQPGG--AAPFSAHTAVVRWKTVRLSVAFFGVILGLLVLYNSAINPFNILPVSYSY 63

Query: 65  RAFRSSSPHRDLLLEKVLKEAAMEDGTIILTTLNDAWAEPDSLLDLFLKSFHIGNGTQRL 124
           RAFRS S  R+ LLEK L +A+ ED T+ILTTLN AWAEP+SLLDLFLKSFH GNGTQRL
Sbjct: 64  RAFRSYSSLRNPLLEKTLTKASNEDKTVILTTLNAAWAEPESLLDLFLKSFHAGNGTQRL 123

Query: 125 LKHLVIVTLDQKAYSRCLALHPHCYELETQGTNFSSEAYFMTSDYLKMMWRRIEFLISVL 184
           LKHLVIV LD KAY RC A HPHCY+L+T+G NFS EAYFMT+DYLKMMWRRI+FL SVL
Sbjct: 124 LKHLVIVCLDAKAYQRCGASHPHCYQLDTEGANFSGEAYFMTADYLKMMWRRIQFLTSVL 183

Query: 185 EMGYSFVFTVS 196
           EMG+SFVFT S
Sbjct: 184 EMGFSFVFTDS 192

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BLAST of Lsi02G000400 vs. ExPASy TrEMBL
Match: A0A6J1GCE5 (Glycosyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111452702 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.5e-69
Identity = 137/191 (71.73%), Postives = 159/191 (83.25%), Query Frame = 0


Query: 5   SAADGEPAAKLSAPSAVHTAVVPWRTVRISVVFVGVVLGLLVLYNSAINPFKFLPVSYTY 64
           ++ D +P+   +AP   HTA+V W+TVR+SV F GV+LGL+VLYNSAI PF  LPVSY+Y
Sbjct: 4   TSGDVQPSG--AAPFGAHTALVRWKTVRLSVAFFGVILGLVVLYNSAIKPFNILPVSYSY 63

Query: 65  RAFRSSSPHRDLLLEKVLKEAAMEDGTIILTTLNDAWAEPDSLLDLFLKSFHIGNGTQRL 124
           RAFRS S  R+ LLEK L +A+ ED T+ILTTLN AWAEPDSLLDLFLKSFH GNGTQRL
Sbjct: 64  RAFRSYSSLRNPLLEKALTKASNEDKTVILTTLNAAWAEPDSLLDLFLKSFHSGNGTQRL 123

Query: 125 LKHLVIVTLDQKAYSRCLALHPHCYELETQGTNFSSEAYFMTSDYLKMMWRRIEFLISVL 184
           LKHLVIV LD KAY RC+A HPHCY+L+T+G NFS EAYFMT+DYLKMMWRRI+FL SVL
Sbjct: 124 LKHLVIVCLDAKAYQRCVASHPHCYQLDTEGANFSGEAYFMTADYLKMMWRRIQFLTSVL 183

Query: 185 EMGYSFVFTVS 196
           EMG+SFVFT S
Sbjct: 184 EMGFSFVFTDS 192

[Close]

BLAST of Lsi02G000400 vs. ExPASy TrEMBL
Match: A0A6J1C6T6 (uncharacterized protein At4g15970-like OS=Momordica charantia OX=3673 GN=LOC111008782 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.3e-68
Identity = 145/194 (74.74%), Postives = 163/194 (84.02%), Query Frame = 0


Query: 3   NNSAADGEPAAKLSAPSAVHTAVVPWRTVRISVVFVGVVLGLLVLYNSAINPFKFLPVSY 62
           +NSAAD + AA   APS     +VP RTVRIS V +GV L +LVLYNSAINPF+FLPVSY
Sbjct: 4   SNSAADLQIAA---APS----TIVPRRTVRISFVLLGVALAILVLYNSAINPFRFLPVSY 63

Query: 63  -TYRAFRSSSPHRDLLLEKVLKEAAMEDGTIILTTLNDAWAEPDSLLDLFLKSFHIGNGT 122
            TYR   S S   D LLEK+LK A+ EDGT+ILTTLNDAWAEP SLLDLFL+SFHIGNGT
Sbjct: 64  TTYRPSASPSLTTDPLLEKILKNASTEDGTVILTTLNDAWAEPGSLLDLFLESFHIGNGT 123

Query: 123 QRLLKHLVIVTLDQKAYSRCLALHPHCYELETQGTNFSSEAYFMTSDYLKMMWRRIEFLI 182
           +RLLKHLVIVT+D+KAY+RC+ALHPHCYEL+TQG NFSSEAYFMTSDYL+MMWRRIEFL 
Sbjct: 124 ERLLKHLVIVTMDKKAYARCVALHPHCYELDTQGINFSSEAYFMTSDYLQMMWRRIEFLT 183

Query: 183 SVLEMGYSFVFTVS 196
           SVL MG+SFVFT S
Sbjct: 184 SVLRMGFSFVFTDS 190

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BLAST of Lsi02G000400 vs. NCBI nr
Match: XP_038894961.1 (uncharacterized protein At4g15970-like [Benincasa hispida])

HSP 1 Score: 336.3 bits (861), Expect = 1.8e-88
Identity = 173/197 (87.82%), Postives = 179/197 (90.86%), Query Frame = 0


Query: 1   MKNNSAADGEPA--AKLSAPSAVHTAVVPWRTVRISVVFVGVVLGLLVLYNSAINPFKFL 60
           MKNNSAADG PA   KLSAPSAVHT  V WR  R SVVFVGV+LGLLVLYNS INPFKFL
Sbjct: 1   MKNNSAADGGPAGNGKLSAPSAVHTTAVTWRMARTSVVFVGVILGLLVLYNSTINPFKFL 60

Query: 61  PVSYTYRAFRSSSPHRDLLLEKVLKEAAMEDGTIILTTLNDAWAEPDSLLDLFLKSFHIG 120
           PVS TYRAFR S+PH+D LLEKVLKEAAMEDGTIILTTLNDAWAEPDSLLDLFLKSFHIG
Sbjct: 61  PVSDTYRAFRFSAPHKDPLLEKVLKEAAMEDGTIILTTLNDAWAEPDSLLDLFLKSFHIG 120

Query: 121 NGTQRLLKHLVIVTLDQKAYSRCLALHPHCYELETQGTNFSSEAYFMTSDYLKMMWRRIE 180
           NGTQRLLKHLVIVTLD+KAYSRC+ALHPHCYEL TQGTNFSSEAYFMT DYLKMMWRRIE
Sbjct: 121 NGTQRLLKHLVIVTLDEKAYSRCVALHPHCYELNTQGTNFSSEAYFMTPDYLKMMWRRIE 180

Query: 181 FLISVLEMGYSFVFTVS 196
           FL SVL+MGYSFVFT S
Sbjct: 181 FLTSVLQMGYSFVFTDS 197

[Close]

BLAST of Lsi02G000400 vs. NCBI nr
Match: XP_008438689.1 (PREDICTED: uncharacterized protein At4g15970-like [Cucumis melo])

HSP 1 Score: 329.3 bits (843), Expect = 2.2e-86
Identity = 167/195 (85.64%), Postives = 178/195 (91.28%), Query Frame = 0


Query: 3   NNSAADGEPAAKLSAPSAV----HTAVVPWRTVRISVVFVGVVLGLLVLYNSAINPFKFL 62
           NNSAADGE A KLS PS V     T+VV WRTVR+SVV VGV LGL VLYNSAINPFKFL
Sbjct: 4   NNSAADGEQAGKLSVPSVVPTTTTTSVVTWRTVRVSVVLVGVTLGLFVLYNSAINPFKFL 63

Query: 63  PVSYTYRAFRSSSPHRDLLLEKVLKEAAMEDGTIILTTLNDAWAEPDSLLDLFLKSFHIG 122
           PVSYTYRAFR SSPH+D +LEKV+KEAAMEDGTII+TTLNDAWAEPDSL DLFLKSFH+G
Sbjct: 64  PVSYTYRAFRFSSPHKDPILEKVVKEAAMEDGTIIITTLNDAWAEPDSLFDLFLKSFHVG 123

Query: 123 NGTQRLLKHLVIVTLDQKAYSRCLALHPHCYELETQGTNFSSEAYFMTSDYLKMMWRRIE 182
           NGTQRLLKHLVIVTLDQKAYSRC+ALHPHCY+L+TQGTNFSSEAYFMTSDYLKMMWRRIE
Sbjct: 124 NGTQRLLKHLVIVTLDQKAYSRCVALHPHCYQLDTQGTNFSSEAYFMTSDYLKMMWRRIE 183

Query: 183 FLISVLEMGYSFVFT 194
           FLI VLEMG+SFVFT
Sbjct: 184 FLIYVLEMGHSFVFT 198

[Close]

BLAST of Lsi02G000400 vs. NCBI nr
Match: XP_004137392.1 (uncharacterized protein At4g15970 [Cucumis sativus] >KGN63967.1 hypothetical protein Csa_014220 [Cucumis sativus])

HSP 1 Score: 325.5 bits (833), Expect = 3.2e-85
Identity = 165/194 (85.05%), Postives = 175/194 (90.21%), Query Frame = 0


Query: 1   MKNNSAADG-EPAAKLSAPSAVHTAVVPWRTVRISVVFVGVVLGLLVLYNSAINPFKFLP 60
           MKNNSA DG E A KLSAPS   T    WRTVR+SVV VGV LGL VLYNSAINPFKFLP
Sbjct: 1   MKNNSAVDGEEQAGKLSAPSVAPTTGATWRTVRVSVVLVGVTLGLFVLYNSAINPFKFLP 60

Query: 61  VSYTYRAFRSSSPHRDLLLEKVLKEAAMEDGTIILTTLNDAWAEPDSLLDLFLKSFHIGN 120
            SY YRAFR SSPH+D +LEKV+KEAAMEDGTIILTTLNDAWAEPDSLLDLFLKSFHIGN
Sbjct: 61  ASYAYRAFRFSSPHKDPILEKVVKEAAMEDGTIILTTLNDAWAEPDSLLDLFLKSFHIGN 120

Query: 121 GTQRLLKHLVIVTLDQKAYSRCLALHPHCYELETQGTNFSSEAYFMTSDYLKMMWRRIEF 180
           GTQRLLKHLVIVTLDQKAYSRC+A+HPHCY+L+TQGTNFSSEAYFMT+DYLKMMWRRIEF
Sbjct: 121 GTQRLLKHLVIVTLDQKAYSRCVAVHPHCYQLDTQGTNFSSEAYFMTADYLKMMWRRIEF 180

Query: 181 LISVLEMGYSFVFT 194
           LI VLEMG+SFVFT
Sbjct: 181 LIYVLEMGHSFVFT 194

[Close]

BLAST of Lsi02G000400 vs. NCBI nr
Match: XP_023524447.1 (uncharacterized protein At4g15970-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275.0 bits (702), Expect = 4.9e-70
Identity = 140/191 (73.30%), Postives = 160/191 (83.77%), Query Frame = 0


Query: 5   SAADGEPAAKLSAPSAVHTAVVPWRTVRISVVFVGVVLGLLVLYNSAINPFKFLPVSYTY 64
           ++ D +P+   +AP   HTAVV W+TVR+SV F GV+LGLLVLYNSAINPF  LPVSY+Y
Sbjct: 60  TSGDVQPSG--TAPFGAHTAVVRWKTVRLSVAFFGVILGLLVLYNSAINPFNILPVSYSY 119

Query: 65  RAFRSSSPHRDLLLEKVLKEAAMEDGTIILTTLNDAWAEPDSLLDLFLKSFHIGNGTQRL 124
           RAFRS S  R+ LLEK L +A+ ED T+ILTTLN AWAEPDSLLDLFLKSFH GNGTQRL
Sbjct: 120 RAFRSYSSLRNPLLEKALTKASNEDKTVILTTLNAAWAEPDSLLDLFLKSFHSGNGTQRL 179

Query: 125 LKHLVIVTLDQKAYSRCLALHPHCYELETQGTNFSSEAYFMTSDYLKMMWRRIEFLISVL 184
           LKHLVIV LD KAY RC+A HPHCY+L+T+G NFS EAYFMT+DYLKMMWRRI+FL SVL
Sbjct: 180 LKHLVIVCLDAKAYQRCVASHPHCYQLDTKGANFSGEAYFMTADYLKMMWRRIQFLTSVL 239

Query: 185 EMGYSFVFTVS 196
           EMG+SFVFT S
Sbjct: 240 EMGFSFVFTDS 248

[Close]

BLAST of Lsi02G000400 vs. NCBI nr
Match: XP_022998701.1 (uncharacterized protein At4g15970-like [Cucurbita maxima])

HSP 1 Score: 273.5 bits (698), Expect = 1.4e-69
Identity = 140/191 (73.30%), Postives = 159/191 (83.25%), Query Frame = 0


Query: 5   SAADGEPAAKLSAPSAVHTAVVPWRTVRISVVFVGVVLGLLVLYNSAINPFKFLPVSYTY 64
           S+ D +P    +AP + HTAVV W+TVR+SV F GV+LGLLVLYNSAINPF  LPVSY+Y
Sbjct: 4   SSGDVQPGG--AAPFSAHTAVVRWKTVRLSVAFFGVILGLLVLYNSAINPFNILPVSYSY 63

Query: 65  RAFRSSSPHRDLLLEKVLKEAAMEDGTIILTTLNDAWAEPDSLLDLFLKSFHIGNGTQRL 124
           RAFRS S  R+ LLEK L +A+ ED T+ILTTLN AWAEP+SLLDLFLKSFH GNGTQRL
Sbjct: 64  RAFRSYSSLRNPLLEKTLTKASNEDKTVILTTLNAAWAEPESLLDLFLKSFHAGNGTQRL 123

Query: 125 LKHLVIVTLDQKAYSRCLALHPHCYELETQGTNFSSEAYFMTSDYLKMMWRRIEFLISVL 184
           LKHLVIV LD KAY RC A HPHCY+L+T+G NFS EAYFMT+DYLKMMWRRI+FL SVL
Sbjct: 124 LKHLVIVCLDAKAYQRCGASHPHCYQLDTEGANFSGEAYFMTADYLKMMWRRIQFLTSVL 183

Query: 185 EMGYSFVFTVS 196
           EMG+SFVFT S
Sbjct: 184 EMGFSFVFTDS 192

[Close]

BLAST of Lsi02G000400 vs. TAIR 10
Match: AT2G02061.1 (Nucleotide-diphospho-sugar transferase family protein )

HSP 1 Score: 167.2 bits (422), Expect = 1.3e-41
Identity = 81/117 (69.23%), Postives = 95/117 (81.20%), Query Frame = 0


Query: 78  LEKVLKEAAMEDGTIILTTLNDAWAEPDSLLDLFLKSFHIGNGTQRLLKHLVIVTLDQKA 137
           LE+VL+ AA +DGT+ILTTLN+AWA P S++DLF +SF IG GT+RLLKHLVI+ LD KA
Sbjct: 108 LEEVLRRAATKDGTVILTTLNEAWAAPGSVIDLFFESFRIGKGTRRLLKHLVIIALDAKA 167

Query: 138 YSRCLALHPHCYELETQGTNFS-SEAYFMTSDYLKMMWRRIEFLISVLEMGYSFVFT 194
           YSRC  LH HC+ LET+G +FS  EAYFMT  YL MMWRRI FL SVLE GY+FVFT
Sbjct: 168 YSRCQELHKHCFRLETEGVDFSGGEAYFMTPSYLTMMWRRISFLRSVLEKGYNFVFT 224

[Close]

BLAST of Lsi02G000400 vs. TAIR 10
Match: AT1G14590.1 (Nucleotide-diphospho-sugar transferase family protein )

HSP 1 Score: 160.6 bits (405), Expect = 1.3e-39
Identity = 84/162 (51.85%), Postives = 108/162 (66.67%), Query Frame = 0


Query: 32  RISVVFVGVVLGLLVLYNSAINPFKFLPVSYTYRAFRSSSPHRDLLLEKVLKEAAMEDGT 91
           R ++    + +   VLY +A +   F P  +   ++  +   +   LE VL +AA  D T
Sbjct: 43  RAALFLAAISISCFVLYRAA-DSLSFSPPIFDLSSYLDNEEPK---LEDVLSKAATRDRT 102

Query: 92  IILTTLNDAWAEPDSLLDLFLKSFHIGNGTQRLLKHLVIVTLDQKAYSRCLALHPHCYEL 151
           ++LTTLN AWA P S++DLF +SF IG  T ++L HLVIV LD KAYSRCL LH HC+ L
Sbjct: 103 VVLTTLNAAWAAPGSVIDLFFESFRIGEETSQILDHLVIVALDAKAYSRCLELHKHCFSL 162

Query: 152 ETQGTNFSSEAYFMTSDYLKMMWRRIEFLISVLEMGYSFVFT 194
            T+G +FS EAYFMT  YLKMMWRRI+ L SVLEMGY+FVFT
Sbjct: 163 VTEGVDFSREAYFMTRSYLKMMWRRIDLLRSVLEMGYNFVFT 200

[Close]

BLAST of Lsi02G000400 vs. TAIR 10
Match: AT4G19970.1 (CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT5G44820.1); Has 801 Blast hits to 466 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 750; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). )

HSP 1 Score: 160.6 bits (405), Expect = 1.3e-39
Identity = 77/128 (60.16%), Postives = 99/128 (77.34%), Query Frame = 0


Query: 69  SSSP---HRDLLLEKVLKEAAMEDGTIILTTLNDAWAEPDSLLDLFLKSFHIGNGTQRLL 128
           SSSP    + +   +VL+ A+ E+ T+I+TTLN AWAEP+SL DLFL+SF IG GT++LL
Sbjct: 430 SSSPLTRSKSISFREVLENASTENRTVIVTTLNQAWAEPNSLFDLFLESFRIGQGTKKLL 489

Query: 129 KHLVIVTLDQKAYSRCLALHPHCYELETQGTNFSSEAYFMTSDYLKMMWRRIEFLISVLE 188
           +H+V+V LD KA++RC  LHP+CY L+T GT+FS E  F T DYLKMMWRRIE L  VLE
Sbjct: 490 QHVVVVCLDSKAFARCSQLHPNCYYLKTTGTDFSGEKLFATPDYLKMMWRRIELLTQVLE 549

Query: 189 MGYSFVFT 194
           MGY+F+FT
Sbjct: 550 MGYNFIFT 557

[Close]

BLAST of Lsi02G000400 vs. TAIR 10
Match: AT5G44820.1 (Nucleotide-diphospho-sugar transferase family protein )

HSP 1 Score: 154.1 bits (388), Expect = 1.2e-37
Identity = 84/177 (47.46%), Postives = 113/177 (63.84%), Query Frame = 0


Query: 32  RISVVFVGVVLGLLVLYNSAINPFKFLPVSYTYRAFRSSSP---------------HRDL 91
           RI ++F+G+    LVLY +A  P + L VS       S SP                  L
Sbjct: 32  RILILFLGLTASCLVLYKTAY-PLQRLNVSNLTSLQASPSPLLPNLNSSEISPETTKPKL 91

Query: 92  LLEKVLKEAAMEDGTIILTTLNDAWAEPDSLLDLFLKSFHIGNGTQRLLKHLVIVTLDQK 151
             +++L+ A+ ++ T+I+TTLN AWAEP+SL DLFL+SF IG GTQ+LLKH+V+V LD K
Sbjct: 92  SFKEILENASTKNNTVIITTLNQAWAEPNSLFDLFLESFRIGQGTQQLLKHVVVVCLDIK 151

Query: 152 AYSRCLALHPHCYELETQGTNFSSEAYFMTSDYLKMMWRRIEFLISVLEMGYSFVFT 194
           A+ RC  LH +CY +ET  T+FS E  + T DYLKMMW RI+ L  VLEMG++F+FT
Sbjct: 152 AFERCSQLHTNCYHIETSETDFSGEKVYNTPDYLKMMWARIDLLTQVLEMGFNFIFT 207

[Close]

BLAST of Lsi02G000400 vs. TAIR 10
Match: AT4G15970.1 (Nucleotide-diphospho-sugar transferase family protein )

HSP 1 Score: 152.9 bits (385), Expect = 2.6e-37
Identity = 70/118 (59.32%), Postives = 94/118 (79.66%), Query Frame = 0


Query: 78  LEKVLKEAAMEDGTIILTTLNDAWAEPDSLLDLFLKSFHIGNGTQRLLKHLVIVTLDQKA 137
           L K+L EAA ED T+I+TTLN AW+EP+S  DLFL SFH+G GT+ LL+HLV+  LD++A
Sbjct: 33  LGKILTEAATEDKTVIITTLNKAWSEPNSTFDLFLHSFHVGKGTKPLLRHLVVACLDEEA 92

Query: 138 YSRCLALHPH-CYELETQGTNFSSEAYFMTSDYLKMMWRRIEFLISVLEMGYSFVFTV 195
           YSRC  +HPH CY ++T G +F+ +  FMT DYLKMMWRRIEFL ++L++ Y+F+FT+
Sbjct: 93  YSRCSEVHPHRCYFMKTPGIDFAGDKMFMTPDYLKMMWRRIEFLGTLLKLRYNFIFTI 150

The following BLAST results are available for this feature:

BLAST of Lsi02G000400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C042	3.7e-36	59.32	Uncharacterized protein At4g15970 OS=Arabidopsis thaliana OX=3702 GN=At4g15970 P...	[more]
Q3E6Y3	6.3e-20	42.98	Uncharacterized protein At1g28695 OS=Arabidopsis thaliana OX=3702 GN=At1g28695 P...	[more]

BLAST of Lsi02G000400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AWN4	1.1e-86	85.64	Glycosyltransferase OS=Cucumis melo OX=3656 GN=LOC103483692 PE=3 SV=1	[more]
A0A0A0LT78	1.5e-85	85.05	Glycosyltransferase OS=Cucumis sativus OX=3659 GN=Csa_1G031880 PE=3 SV=1	[more]
A0A6J1KAZ2	6.9e-70	73.30	Glycosyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111493282 PE=3 SV=1	[more]
A0A6J1GCE5	4.5e-69	71.73	Glycosyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111452702 PE=3 SV=1	[more]
A0A6J1C6T6	1.3e-68	74.74	uncharacterized protein At4g15970-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Lsi02G000400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894961.1	1.8e-88	87.82	uncharacterized protein At4g15970-like [Benincasa hispida]	[more]
XP_008438689.1	2.2e-86	85.64	PREDICTED: uncharacterized protein At4g15970-like [Cucumis melo]	[more]
XP_004137392.1	3.2e-85	85.05	uncharacterized protein At4g15970 [Cucumis sativus] >KGN63967.1 hypothetical pro...	[more]
XP_023524447.1	4.9e-70	73.30	uncharacterized protein At4g15970-like [Cucurbita pepo subsp. pepo]	[more]
XP_022998701.1	1.4e-69	73.30	uncharacterized protein At4g15970-like [Cucurbita maxima]	[more]

BLAST of Lsi02G000400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02061.1	1.3e-41	69.23	Nucleotide-diphospho-sugar transferase family protein	[more]
AT1G14590.1	1.3e-39	51.85	Nucleotide-diphospho-sugar transferase family protein	[more]
AT4G19970.1	1.3e-39	60.16	CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (I...	[more]
AT5G44820.1	1.2e-37	47.46	Nucleotide-diphospho-sugar transferase family protein	[more]
AT4G15970.1	2.6e-37	59.32	Nucleotide-diphospho-sugar transferase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005069	Nucleotide-diphospho-sugar transferase	PFAM	PF03407	Nucleotid_trans	coord: 124..193 e-value: 3.0E-17 score: 63.3
None	No IPR available	PANTHER	PTHR46038:SF13	NUCLEOTIDE-DIPHOSPHO-SUGAR TRANSFERASE FAMILY PROTEIN	coord: 20..193
IPR044821	Putative nucleotide-diphospho-sugar transferase At1g28695/At4g15970-like	PANTHER	PTHR46038	EXPRESSED PROTEIN-RELATED	coord: 20..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G000400.1	Lsi02G000400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071555	cell wall organization
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016757	glycosyltransferase activity