Lsi02G000360 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G000360
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Small glutamine-rich tetratricopeptide repeat-containing protein beta
Location	chr02: 379730 .. 386414 (-)
RNA-Seq Expression	Lsi02G000360
Synteny	Lsi02G000360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTACACACAAACTAAAGTAATGAATCACATGAGGACAAAATTATTGAATTTACATATTATCAATAGACCATCAATTGAAGACAAAAATATCAATATTTACAAATGTCATTTAAGTTTTTTAAGTGTCATCGTTTGTAATTAGGTATCTATGAACCGTTGTATGTAAATATTTTGTTTGTGATGTATCTCCTTGAAGAGATAAGTGAGAGTGGCACATGTATGAAAAAGTTTTGATATGTCACTTGTGTTAAGTTATCCATTTACTTTCATCATTTATCTATCACACCCTATCAACTCAACCAATATTTGTTGGGTAAATATGATATGTTATATCATTGTTTTAATAGGTCAAATTGTATAGTATATTGAATTGTAAATTAAAATATAAAAAATGCAATCAAAACTATTAAGAATTTGCAGTTTAAAATCGAAAGAATAATAATATAGCAAAGGAAAGCAGAGGGATAGAAAGGGGGAAGGAATGAAGGGAAGTGTGTGTTTCCTCTGCGCTCCTCTTCCATTTCTTCCAAACCAAACTTCCTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCAATTCCATTTCTAAACCTAGCCCTATTCATGCTCACACTCACGATCAAGAGATTCGGGTTTGCACCAATCGCACTTGCCGCCGTCAAGGTTCCTTTCACACACTCGAAATTCTCAACGCCCTTGCACCTCCCACCATTACTGTCAATTCCTCTGGTTGTTTAGGAAGGTGTGGCGCTGGCCCCAACGTTGCTGTTTTGCCTGATGGATTCGTCGTCGCTCATTGTGGCACGCCTGCTCGAGCTGCCGAGGTCATCATCCAATTATCTGGTGGAGACTCAGATTCTGTTGCTATCTCAAAGAGCTTGGAGGCTCTTGCTCTGAGGAAGAGAGCTCAATGTGAGTTGGAGGACGGGAATTTCTCCCAGGCCGAGCTACTTCTTTCGCAGGTAAACTCTTCCGCCTTTTGCTGTGTGAGTGGTTTTCTACTCTTCAGTCTGAGAATTTTGTTCAGAATAATACTCTATGTATGATGCCCGGCTTCAATTTGTTGCAGGCGATAGGTTTAAAACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTGTTCTACTTCTAGTTCTATGTTGTATCTTATTATATACAAATCGTGAGCTATATGTCCCTTCTTATAGTAATTTTGGTAACGATAATTGAATTTATGCCAATAAGCGTTGACAATTATTATTACTCGTTCAATTTTAAGTCGCCTAAGTTCTTCCCTCATGCTCCATGCTGTTGATAATTTATTCCTGCATCTTTCTAGCATTTGTATATTTCTTCACTTAAAAATTGTTTGCCCATGTATTTACTCAAGCAGCTGCATCCAGAAAATTTAGTTACACAGAACTACTTAAATTTTCAGGTCCATCGTAAGATTGACACTTGGAAATCATTCTGGTGCTCTCGAAGATGCAAATGAAGCTCTAAGAGTAGCTCCTCGATATCTCGAGGTGAGAAGTATTTTAACTAATCATCACGTGCATTACATTCTATCTCAAAACTAGACGTTAATTTTGAGAAAATAACTATGCTGTTACACTTCAATGAGTCTGGATTGTGAATATAATAATTATCAAAGGGGGATATTGTTTGAAACTACCAAGTTGGAGACCAGGTAGTAGTACCTCAATTAATGGACAAGGTTTACGATATATAGAGTTCCCATTTCTTCCACTCCAAGCAGATTTGAGTAGTGCAAAGCTTTAGGGGTCAAGAGCAAAAGAAAATTTGGAGGATAACAGGGAAATTTTGGCCACGAACATAAATTATAATTGTAAATTCATGGTGGGCACTTACCTAAAATTTAATATCTTAAAAGTTTTTGTAGCACCCAAATGTTGTGGAGTCTGATAGGTTGTCCCATAAGGATTAGACAACGTACGTGGAATCTGTTCTGAACACTCACAGATATGTATATATATAAAATTATGATTGTAAATTTGGAGATCAACTTTTTCTTAGGCTCCTTCAGCCTTTGTGATGCATGAATCTTTATATGTTAATATTAAAAATAAATGTTATGGGAAAAAAATCGATGGACGTGACACTCTTGGATATTAAGAATTTTAAAAAAATAGCTCTTAGTTTAAAATTCAAAAGACTGATGATGCTAAACTATAATTTAGAGGTCCTTCGAACCCTCAACAAACTAATTGAACATGCAGCCCTTTTGAGATCATTACAAATTCAAGTCCTTTAATCTAAGAAGCACGAACACTTTAGTTTGGCTAACGTGTTTGTGTCCGACATATGTCGAACACTTCGACACTTGTTGGGCACGTATCAAACACTTGTTAGTGCAACAAATGTGTTAGATATGCATTGAATACTTGTTGAGTAGACTAAAAAGACACATATATGACAATTAACTACTTTTGAGTGTGAAATACAACAAGATAAGTCTTTTAAGCATATAAATGCATCAACACATTTACTTTCAATTTTATTTTGGTATGAAAATGATATATATTTTTAAAAATGTATACTTTAATAAACGTGTCCTTGTCGTGTCGTGTCCTAGATATTTAAAATATGGCATGTCGCCGTGTTCGTGTTGTGTCATATCCGTATCCGTGCTTCTTAGCCTTTAATTGAGAAAATGTGAGAAAAAAGGATTGTAGCTCTAGAGTAGATTATCGTATTGTTCCTGTGATGTGTTTCCTAATATTCAACTTGCAGGCTTACATTTGCCAAGGTGATGCATTCATAGCTATGGACCATTTTGATTCAGCTGAGACGTCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGCCGTTCAAAGTCATTCAAGGTATTGATTCACTTAGATTTATGTTAGAGTGTGGATATAATATTAAATTTACCTTCACCCATTAGGCCATCAACTTAAGTTTTTGGGTCAATCAAGGATATAATATTAAACTTACTTTCACCTATCGACTTAACCTTTTGGGTAAATAAGTGATTTAGTACTTTGTATGAGTAGACTATGGGCAATTTCATCACTGGGACAAAAAGGGACAACCGCTTTAATCAACCAATTTTCAGGACTTTTGCTCCTTGGTTGGGATTGGCTTGGTAGAATTTTGGAGCTATTTTTCTGTTTTTTGAGGACATTTTTTTTTTAATTTAAAAAATAACTGTTTTCAAGTTGTTATTGTCACTAATGACCAACCCATAGTTCAAAACAACTTAAGCTTTCTTCCTTTAATAATCATAAGCTTGTAGATATTAACTATAAGTTCCATTTACAAGCCACTTGATAGCTTGGAAAACAAACTTGTTTCTTAAAACAGTCTCCCAAACAAGACTATTCGTTTATGAACTATTTTGGAATCCTGTTCTGATCCCAAATCAGGCACAGTTTCTGTAACGCTTGCTATAAATTCTCACTTCTCTTTCAATCATACAATGCACACCATTTTGAGTGATTTTTTCCTTGTCATTTTTGCAAAATGAGATTGAAGTCAGTTTTTGTCTAGTGCTGCTAGAATGCCGCTTTAATATTCTTCTAATATTTACGCACCATTTCTTCTATAGGCACGAGTTGCTAAACTTCAGGCGAAGCTCAGTGCTGTGAGAACACAATAAATCTGAGATGTGGAGCAAGGAAGCAGAATAGTCAATGAAAAGAGTTCGAGATTCAAACATTCCTTCATGTTGTTTCCAGGTTTCAAATTTCTGACTCAGATTGTCTTTGAAATCTTAATTAGGTTAAATATATAAAATTTGATGCAATTTTGGAGTTTCAAGGAAATCTGTATGGGAATGGGTATAGAATGATTTCAGCAATAAAAATAACTAATCTGGAGATCAATAATTTTAAGAATCTTCAGAATCTCCAGGCATGAGATAATTCCTAAATTCCTAATCGTTTTTATGTTGGAGGAAAAACCTCGCAAATTTCGCAATCTCATAACCATTAGTCTTAGGGCATGCATTCACATGGAGAAAGTGATTTACTGACCTGTAGAGTAAGATGGAGATTTTGATTGGGGATTTTGACTTTGGCTTATAATTAATGATTAATATAATTGCTACAGGCATGAATTAGTATAGCAGGCGAAGGGTTCGAGTTAAATCTTTGGTGTTCAAAATTTTTAATCAGATGTTGTAATGGGAAGGTTCACTACAATCTATGAAGCACCAAACATTTTGTTCTCGGTAAAGTGTTGGACACTAAAAAGGTGTATAAATTTTCCCCCTAATTTTGGACATGTCTAGACACAACTGGTGAAAAATGTTTAACGTAAAAACTAAGGAAATTTTTTTTCTCATAAAATTTCTCGTATATCAATTATATCAGTCAATCCTAAAGCAGGATGATGACATCTTCATCCTCTAGTTATAGCTAACTATTTTTTTTTTCATATCTTTTAAGACTTCAAATATCATTAGTTGACTTAACTTGTATGTTTCTAGTGAAAGGATATCTTGTTTTTGAGAAATTTTTCACAAATAGAAAAAATGTCGAACTATTTAGAGAAAATAACAAAAGAAAAAAAAAACATCGATAGATTTCTATCAACATCTATCAGTGATAGACTTCTATCATTTCTATCGCTGATAGACGTTGATAGACTTTTTTTAGCGTCTATCATAACTATCTAAAAATTTTGCTATTTTGTGTAAATAGTTTTACTTATTTTTAAAAATTCTTCTTGTTTTTATGTCAAGTTTACATTTTTTTTATATAAAGTAATATTAACATATCAATATAGACACATATTTCCCTAAACGGATGTGTCCCCGTGCTTGTGTCTGTGGGCTTCTTAGTTAAGACTGCATAATACTATTAACTCCAAGAAATCTCTCGTGAAAATTTAATTTTCAAGTAAGTGAACATATTTCATTTTTCTGGATATAGATTAAGCAAATCCAAATAAATGCACACTTTGGCTCCTATTCTGAGCTCTGATCCAGTATAATATCAATACTAGCTTCTTTTTCTGCTTGGAATGTTTCTCTTGTAGTAATCTCAATGATAAGGGAACTTTATACATCTTCCATTACTTGCCTCCTTGATAATATTCTCTTCTGATGGTGGAGATTTTGAAAGTGATTCATCAGACAAAGCCATTGAAATCTACCCTTGACTTGCAGAATATGAATCTCTAGGATTTAGCATTTTCTAAAATATTATTTAAGAATTAAGAGCGTGTTTGAAAAACAAGGCAGCTCAAGAGCTACTACCTTAGCGAGCTGCCACCTTATCTCTATACTATGCTGTCTAAAGTTAGTTCATAGGTATTTAGTATTGTGTGGTTGAAATTCAGCATTTAATGACTGGTTTTGTTGATTACAATAATTGCAACCTTTTTCTAAAGTACAAGGCAAAATTATTATAAGCTTCACGAGCTTCAAAATGTCGGAGTGGGTTATGATATTGAAACTGAAAAGTTTGATACTTTATCCAACAGTACATAATTGGGTTGGTGTTATGGTGCATTATGAAGCTGTCAATTGAATATAATTTGGCTGTCATAGAATCATTCCTCTAATTATATCACAACTAAAAACAGATAAAAGTTGGCGTTAAGAAGGTGAGTGAACTTAAAACTATTTCATACTGCTTTCTAATACTAGGGTTTAGTGTCCATCCAATGTCACAAGATGCTAATAAAAGATACTTTCACCAAGTTATTTATAGGGGATTGGCAAAAATCTTAATACTGCTACCCACTAAATATCTCTAGTTATGGACGGCTTTCCCAACCCAAGTGAAAATGAAAAAGGAATTGTTAAGTAGGATTTGTGCTGTGACCACACAAAAACATGTCCATGCTCTTCACCTTTGCCCACCACCTGTAAGTCTTCCTTCTGCTGTTACTTGTTTTGTCAATGGCACTGCTGTTGACACCAGAATTCCTCTTGGATTTTAGTTTTCCAATTTGAAAGCATGCCTCCAATGTTACCTCATTCCCATTCTGGTCTTTATGCTTGTTGCTGCATCTACTCTCTACCATTGCTTTATCTGTCTTCACAAGTTGATCATAGTACTCTTGATTCCTTTTCTCCAGCCCATTGATCTGGCCCTGAAGATCTTCAATTTTCTGGTTAAGCAGGTAAACCCTATGATCATCCCGTAGTTTCAGCATACAGCGTGCCATCTCGCCTGCCTTCCGTTTCATGAAAACAGACTCTGCTACCAGCCCCTTGTTTTCCTCCATCAAGGAAGCCACCCTATACTCTAATCTTGCATTTTCATTTAGCAGTATGAGCCTCTCAGACTCCAAGACCTCAAGCAAACTCTTCTGAAGCTCTATCTTCCTTGATGAATCGCAGCATTGCCTTTCCAGGGTGTTTACCTCATTTGTAATAATGTCGTACTCCACATTCTTGATGACAAGCTCAGCAATAAAAGCATCATTGTCTACCATACCACAGTTTTTAGCTGATGTTACAGATACTTGCTGGTAGGACAGAGAACTCTCTGCATCAGACTCAATCTGACTGATCCCTGAATCTCCGGCCCCGTCAAAAGACTCGAGGGTTGAAGTAACAGAAGACTGTCTGTTGTGATGTTTGGCAACAGTTTGGATATACCGATCGGATAAGGTGGTGTAAGCAGTGTATAGTTCTTGGAGAAGTGCCAACAGTTGAGGGCGTTTATTGTAGTAAAATTCTGCACGTTCAGCAAAA

mRNA sequence

TCTACACACAAACTAAAGTAATGAATCACATGAGGACAAAATTATTGAATTTACATATTATCAATAGACCATCAATTGAAGACAAAAATATCAATATTTACAAATGTCATTTAAGTTTTTTAAGTGTCATCGTTTGTAATTAGGTATCTATGAACCGTTGTATGTAAATATTTTGTTTGTGATGTATCTCCTTGAAGAGATAAGTGAGAGTGGCACATGTATGAAAAAGTTTTGATATGTCACTTGTGTTAAGTTATCCATTTACTTTCATCATTTATCTATCACACCCTATCAACTCAACCAATATTTGTTGGGTAAATATGATATGTTATATCATTGTTTTAATAGGTCAAATTGTATAGTATATTGAATTGTAAATTAAAATATAAAAAATGCAATCAAAACTATTAAGAATTTGCAGTTTAAAATCGAAAGAATAATAATATAGCAAAGGAAAGCAGAGGGATAGAAAGGGGGAAGGAATGAAGGGAAGTGTGTGTTTCCTCTGCGCTCCTCTTCCATTTCTTCCAAACCAAACTTCCTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCAATTCCATTTCTAAACCTAGCCCTATTCATGCTCACACTCACGATCAAGAGATTCGGGTTTGCACCAATCGCACTTGCCGCCGTCAAGGTTCCTTTCACACACTCGAAATTCTCAACGCCCTTGCACCTCCCACCATTACTGTCAATTCCTCTGGTTGTTTAGGAAGGTGTGGCGCTGGCCCCAACGTTGCTGTTTTGCCTGATGGATTCGTCGTCGCTCATTGTGGCACGCCTGCTCGAGCTGCCGAGGTCATCATCCAATTATCTGGTGGAGACTCAGATTCTGTTGCTATCTCAAAGAGCTTGGAGGCTCTTGCTCTGAGGAAGAGAGCTCAATGTGAGTTGGAGGACGGGAATTTCTCCCAGGCCGAGCTACTTCTTTCGCAGTCTGAGAATTTTGTTCAGAATAATACTCTATGTATGATGCCCGGCTTCAATTTGTTGCAGGCGATAGGTTTAAAACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTCCATCGTAAGATTGACACTTGGAAATCATTCTGGTGCTCTCGAAGATGCAAATGAAGCTCTAAGAGTAGCTCCTCGATATCTCGAGGCTTACATTTGCCAAGGTGATGCATTCATAGCTATGGACCATTTTGATTCAGCTGAGACGTCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGCCGTTCAAAGTCATTCAAGGCACGAGTTGCTAAACTTCAGGCGAAGCTCAGTGCTGTGAGAACACAATAAATCTGAGATGTGGAGCAAGGAAGCAGAATAGTCAATGAAAAGAGTTCGAGATTCAAACATTCCTTCATGTTGTTTCCAGGCATGAATTAGTATAGCAGGCGAAGGGTTCGAGTTAAATCTTTGGTGTTCAAAATTTTTAATCAGATGTTGTAATGGGAAGGTTCACTACAATCTATGAAGCACCAAACATTTTGTTCTCGGTAAAGTGTTGGACACTAAAAAGCCCATTGATCTGGCCCTGAAGATCTTCAATTTTCTGGTTAAGCAGGTAAACCCTATGATCATCCCGTAGTTTCAGCATACAGCGTGCCATCTCGCCTGCCTTCCGTTTCATGAAAACAGACTCTGCTACCAGCCCCTTGTTTTCCTCCATCAAGGAAGCCACCCTATACTCTAATCTTGCATTTTCATTTAGCAGTATGAGCCTCTCAGACTCCAAGACCTCAAGCAAACTCTTCTGAAGCTCTATCTTCCTTGATGAATCGCAGCATTGCCTTTCCAGGGTGTTTACCTCATTTGTAATAATGTCGTACTCCACATTCTTGATGACAAGCTCAGCAATAAAAGCATCATTGTCTACCATACCACAGTTTTTAGCTGATGTTACAGATACTTGCTGGTAGGACAGAGAACTCTCTGCATCAGACTCAATCTGACTGATCCCTGAATCTCCGGCCCCGTCAAAAGACTCGAGGGTTGAAGTAACAGAAGACTGTCTGTTGTGATGTTTGGCAACAGTTTGGATATACCGATCGGATAAGGTGGTGTAAGCAGTGTATAGTTCTTGGAGAAGTGCCAACAGTTGAGGGCGTTTATTGTAGTAAAATTCTGCACGTTCAGCAAAA

Coding sequence (CDS)

ATGAAGGGAAGTGTGTGTTTCCTCTGCGCTCCTCTTCCATTTCTTCCAAACCAAACTTCCTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCAATTCCATTTCTAAACCTAGCCCTATTCATGCTCACACTCACGATCAAGAGATTCGGGTTTGCACCAATCGCACTTGCCGCCGTCAAGGTTCCTTTCACACACTCGAAATTCTCAACGCCCTTGCACCTCCCACCATTACTGTCAATTCCTCTGGTTGTTTAGGAAGGTGTGGCGCTGGCCCCAACGTTGCTGTTTTGCCTGATGGATTCGTCGTCGCTCATTGTGGCACGCCTGCTCGAGCTGCCGAGGTCATCATCCAATTATCTGGTGGAGACTCAGATTCTGTTGCTATCTCAAAGAGCTTGGAGGCTCTTGCTCTGAGGAAGAGAGCTCAATGTGAGTTGGAGGACGGGAATTTCTCCCAGGCCGAGCTACTTCTTTCGCAGTCTGAGAATTTTGTTCAGAATAATACTCTATGTATGATGCCCGGCTTCAATTTGTTGCAGGCGATAGGTTTAAAACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTCCATCGTAAGATTGACACTTGGAAATCATTCTGGTGCTCTCGAAGATGCAAATGAAGCTCTAAGAGTAGCTCCTCGATATCTCGAGGCTTACATTTGCCAAGGTGATGCATTCATAGCTATGGACCATTTTGATTCAGCTGAGACGTCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGCCGTTCAAAGTCATTCAAGGCACGAGTTGCTAAACTTCAGGCGAAGCTCAGTGCTGTGAGAACACAATAA

Protein sequence

MKGSVCFLCAPLPFLPNQTSFSSSSSSSSSSSNSISKPSPIHAHTHDQEIRVCTNRTCRRQGSFHTLEILNALAPPTITVNSSGCLGRCGAGPNVAVLPDGFVVAHCGTPARAAEVIIQLSGGDSDSVAISKSLEALALRKRAQCELEDGNFSQAELLLSQSENFVQNNTLCMMPGFNLLQAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAMDHFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAVRTQ

Homology

[Close]

BLAST of Lsi02G000360 vs. ExPASy Swiss-Prot
Match: Q9STH1 (Hsp70-Hsp90 organizing protein 3 OS=Arabidopsis thaliana OX=3702 GN=HOP3 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 5.2e-07
Identity = 32/84 (38.10%), Postives = 44/84 (52.38%), Query Frame = 0


Query: 181 QAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAMD 240
           +AI L P    HI++ +RS    +L  +  AL DA + + + P + + Y   G AFI + 
Sbjct: 27  EAINLSPTN--HILYSNRSASYASLHRYEEALSDAKKTIELKPDWSKGYSRLGAAFIGLS 86

Query: 241 HFDSAETSYSTALEIDPSIRRSKS 265
            FD A  SY   LEIDPS    KS
Sbjct: 87  KFDEAVDSYKKGLEIDPSNEMLKS 108

[Close]

BLAST of Lsi02G000360 vs. ExPASy Swiss-Prot
Match: Q9LNB6 (Hsp70-Hsp90 organizing protein 1 OS=Arabidopsis thaliana OX=3702 GN=HOP1 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.4e-06
Identity = 29/100 (29.00%), Postives = 57/100 (57.00%), Query Frame = 0


Query: 181 QAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAMD 240
           +AI L P    H++F +RS    +L  ++ AL DA E +++ P + + Y   G A + ++
Sbjct: 27  EAIALAPTN--HVLFSNRSAAHASLHQYAEALSDAKETIKLKPYWPKGYSRLGAAHLGLN 86

Query: 241 HFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAVR 281
            F+ A T+Y   L++DP+   +++ K+ +A  +A ++  R
Sbjct: 87  QFELAVTAYKKGLDVDPT---NEALKSGLADAEASVARSR 121

[Close]

BLAST of Lsi02G000360 vs. ExPASy Swiss-Prot
Match: Q96EQ0 (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Homo sapiens OX=9606 GN=SGTB PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.8e-06
Identity = 31/99 (31.31%), Postives = 57/99 (57.58%), Query Frame = 0


Query: 181 QAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAMD 240
           QAI L P   ++  + +R+  +  LG+++ A++D  +A+ +  +Y +AY   G A  A++
Sbjct: 110 QAIELDPNNAVY--YCNRAAAQSKLGHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTALN 169

Query: 241 HFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAV 280
            F+ A TSY  AL++DP    + S+K+ +   + KL  V
Sbjct: 170 KFEEAVTSYQKALDLDP---ENDSYKSNLKIAEQKLREV 203

[Close]

BLAST of Lsi02G000360 vs. ExPASy Swiss-Prot
Match: P15705 (Heat shock protein STI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=STI1 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.8e-06
Identity = 27/82 (32.93%), Postives = 46/82 (56.10%), Query Frame = 0


Query: 192 HIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAMDHFDSAETSYST 251
           H+++ +RS    +L   S AL DANE +++ P + + Y   G A + +   D AE++Y  
Sbjct: 40  HVLYSNRSACYTSLKKFSDALNDANECVKINPSWSKGYNRLGAAHLGLGDLDEAESNYKK 99

Query: 252 ALEIDPSIRRSKSFKARVAKLQ 274
           ALE+D S + +K    +V + Q
Sbjct: 100 ALELDASNKAAKEGLDQVHRTQ 121

[Close]

BLAST of Lsi02G000360 vs. ExPASy Swiss-Prot
Match: Q8VD33 (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Mus musculus OX=10090 GN=Sgtb PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.3e-05
Identity = 31/99 (31.31%), Postives = 56/99 (56.57%), Query Frame = 0


Query: 181 QAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAMD 240
           QAI L P   ++  + +R+  +  L +++ A++D  +A+ +  +Y +AY   G A  AM+
Sbjct: 110 QAIELDPNNAVY--YCNRAAAQSKLSHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTAMN 169

Query: 241 HFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAV 280
            F+ A TSY  AL++DP    + S+K+ +   + KL  V
Sbjct: 170 KFEEAVTSYQKALDLDP---ENDSYKSNLKIAEQKLREV 203

[Close]

BLAST of Lsi02G000360 vs. ExPASy TrEMBL
Match: A0A0A0LQA2 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G031840 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 6.0e-115
Identity = 229/282 (81.21%), Postives = 237/282 (84.04%), Query Frame = 0


Query: 1   MKGSVCFLCAPLPFLPNQTSFSSSSSSSSSSSNSISKPSPIHAHTHDQEIRVCTNRTCRR 60
           MKGSVCFLC  LPFLPN      + +S SSSS+SISK S IHA TH QEIRVCTNRTCRR
Sbjct: 1   MKGSVCFLCGSLPFLPN-----PNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRR 60

Query: 61  QGSFHTLEILNALAPPTITVNSSGCLGRCGAGPNVAVLPDGFVVAHCGTPARAAEVIIQL 120
           QGSFH LEILNALAPP I VN SGCLG+CGAGPNVAVLPDGFVV HCGTPARAA++IIQL
Sbjct: 61  QGSFHALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQL 120

Query: 121 SGGDSDSVAISKSLEALALRKRAQCELEDGNFSQAELLLSQSENFVQNNTLCMMPGFNLL 180
           SG DSDSV ISKSLEALALRKRAQCELEDGNFSQAELLLS                    
Sbjct: 121 SGQDSDSVGISKSLEALALRKRAQCELEDGNFSQAELLLS-------------------- 180

Query: 181 QAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAMD 240
           QAI LKPCGGIHIIFKDRSIVRL LGNHSGALEDANEALRVAP+YLEAYICQGDAF+AMD
Sbjct: 181 QAIDLKPCGGIHIIFKDRSIVRLALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMD 240

Query: 241 HFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAVRTQ 283
           HFDSAE SYSTALEIDPSIRRSKSFKARVAKLQ KLSAVRTQ
Sbjct: 241 HFDSAEISYSTALEIDPSIRRSKSFKARVAKLQEKLSAVRTQ 257

[Close]

BLAST of Lsi02G000360 vs. ExPASy TrEMBL
Match: A0A1S3AUF9 (tetratricopeptide repeat protein 1 OS=Cucumis melo OX=3656 GN=LOC103482942 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 1.1e-111
Identity = 223/282 (79.08%), Postives = 235/282 (83.33%), Query Frame = 0


Query: 1   MKGSVCFLCAPLPFLPNQTSFSSSSSSSSSSSNSISKPSPIHAHTHDQEIRVCTNRTCRR 60
           MKGSVCFLCA LPFLPN      + +S SSSS+SISK S IHA TH QEIRVCTNRTCRR
Sbjct: 1   MKGSVCFLCASLPFLPN-----PNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRR 60

Query: 61  QGSFHTLEILNALAPPTITVNSSGCLGRCGAGPNVAVLPDGFVVAHCGTPARAAEVIIQL 120
           QGSF  LEIL+ALAPPTI VN SGCLG+CGAGPNVAVLPDGFV+ HCGTPARAA++IIQL
Sbjct: 61  QGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCGTPARAADLIIQL 120

Query: 121 SGGDSDSVAISKSLEALALRKRAQCELEDGNFSQAELLLSQSENFVQNNTLCMMPGFNLL 180
           SG DSDSV +SKSLEALALRKRAQCELEDGNFSQAELLLS                    
Sbjct: 121 SGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLS-------------------- 180

Query: 181 QAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAMD 240
           QAI L PCGGIHIIFKDRS+VRL LGNHSGALEDANEALRVAP+YLEAYICQGD F+AMD
Sbjct: 181 QAIDLIPCGGIHIIFKDRSVVRLALGNHSGALEDANEALRVAPQYLEAYICQGDVFLAMD 240

Query: 241 HFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAVRTQ 283
            FDSAE SYSTALEIDPSIRRSKSFKARVAKLQ KLSAVRTQ
Sbjct: 241 KFDSAEISYSTALEIDPSIRRSKSFKARVAKLQEKLSAVRTQ 257

[Close]

BLAST of Lsi02G000360 vs. ExPASy TrEMBL
Match: A0A6J1EAV3 (small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431489 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 1.2e-102
Identity = 207/282 (73.40%), Postives = 227/282 (80.50%), Query Frame = 0


Query: 1   MKGSVCFLCAPLPFLPNQTSFSSSSSSSSSSSNSISKPSPIHAHTHDQEIRVCTNRTCRR 60
           M  ++C LC PL F PN+TSFSS+S S           +PI A   +QEIRVCTNRTCRR
Sbjct: 1   MTATLCLLCIPLRFPPNRTSFSSTSISL----------TPIRA--QNQEIRVCTNRTCRR 60

Query: 61  QGSFHTLEILNALAPPTITVNSSGCLGRCGAGPNVAVLPDGFVVAHCGTPARAAEVIIQL 120
           QGSF TLE L+ALAPPTITVN SGCLG+CGAGPNVAVLPDGFVV HC TPARAAEVI+QL
Sbjct: 61  QGSFQTLETLSALAPPTITVNPSGCLGKCGAGPNVAVLPDGFVVGHCATPARAAEVIMQL 120

Query: 121 SGGDSDSVAISKSLEALALRKRAQCELEDGNFSQAELLLSQSENFVQNNTLCMMPGFNLL 180
           SGG SDS+ +SKSLEALALRKRA+CE+EDGNFSQA+LLLS                    
Sbjct: 121 SGGVSDSLGVSKSLEALALRKRAECEVEDGNFSQADLLLS-------------------- 180

Query: 181 QAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAMD 240
           +AI LKPCGGIHIIFKDRSIVRL LGNH+GALEDANEALRVAPRY EAYICQGD F++MD
Sbjct: 181 KAIELKPCGGIHIIFKDRSIVRLALGNHAGALEDANEALRVAPRYPEAYICQGDVFLSMD 240

Query: 241 HFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAVRTQ 283
           HFDSAE SYSTALEI+PSIRRSKSFKARVAKLQ KL+AVRTQ
Sbjct: 241 HFDSAEMSYSTALEIEPSIRRSKSFKARVAKLQEKLNAVRTQ 250

[Close]

BLAST of Lsi02G000360 vs. ExPASy TrEMBL
Match: A0A6J1KQA5 (uncharacterized protein LOC111495518 OS=Cucurbita maxima OX=3661 GN=LOC111495518 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 7.1e-100
Identity = 203/282 (71.99%), Postives = 224/282 (79.43%), Query Frame = 0


Query: 1   MKGSVCFLCAPLPFLPNQTSFSSSSSSSSSSSNSISKPSPIHAHTHDQEIRVCTNRTCRR 60
           M  ++C LC PL F PN+TSFSS+S S           +PI A   +QEIRVCTNRTCRR
Sbjct: 1   MTATLCLLCIPLRFPPNRTSFSSTSVSL----------TPIRA--QNQEIRVCTNRTCRR 60

Query: 61  QGSFHTLEILNALAPPTITVNSSGCLGRCGAGPNVAVLPDGFVVAHCGTPARAAEVIIQL 120
           QGSF TLE L ALAPPTITVN SGCLG+CGAGPNVAV PDGFVV HC TPARAAEVI++L
Sbjct: 61  QGSFQTLETLCALAPPTITVNPSGCLGKCGAGPNVAVFPDGFVVGHCATPARAAEVIMRL 120

Query: 121 SGGDSDSVAISKSLEALALRKRAQCELEDGNFSQAELLLSQSENFVQNNTLCMMPGFNLL 180
           SGG SDS+ +SKSLEALALRKRA+CE+EDGNFSQA+LLLS                    
Sbjct: 121 SGGVSDSLGVSKSLEALALRKRAECEVEDGNFSQADLLLS-------------------- 180

Query: 181 QAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAMD 240
           +AI LKPCGGIHIIFKDRSIVRL LGN++ ALEDANEALRVAP+Y EAYICQGD F++MD
Sbjct: 181 KAIELKPCGGIHIIFKDRSIVRLALGNYAAALEDANEALRVAPQYPEAYICQGDVFLSMD 240

Query: 241 HFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAVRTQ 283
           HFDSAE SYSTALEIDPSIRRSKSFKARVAKLQ KL+AVRTQ
Sbjct: 241 HFDSAEISYSTALEIDPSIRRSKSFKARVAKLQEKLNAVRTQ 250

[Close]

BLAST of Lsi02G000360 vs. ExPASy TrEMBL
Match: A0A6J1C6P2 (sperm-associated antigen 1 OS=Momordica charantia OX=3673 GN=LOC111008751 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 1.1e-95
Identity = 199/284 (70.07%), Postives = 218/284 (76.76%), Query Frame = 0


Query: 1   MKGSVCFLC---APLPFLPNQTSFSSSSSSSSSSSNSISKPSPIHAHTHDQEIRVCTNRT 60
           MK +  F+C   AP   LPN TSFS+S S          K SPI  H H+QEIRVCTNRT
Sbjct: 1   MKATAGFVCDPHAPFRLLPNHTSFSTSISR--------YKRSPIRFHAHNQEIRVCTNRT 60

Query: 61  CRRQGSFHTLEILNALAPPTITVNSSGCLGRCGAGPNVAVLPDGFVVAHCGTPARAAEVI 120
           CRRQGSF TLE LN LAPPTITVNS GCLG+CGAGPNVAVLPDGFVV HCGTPARAAE++
Sbjct: 61  CRRQGSFQTLETLNGLAPPTITVNSCGCLGKCGAGPNVAVLPDGFVVGHCGTPARAAELM 120

Query: 121 IQL--SGGDSDSVAISKSLEALALRKRAQCELEDGNFSQAELLLSQSENFVQNNTLCMMP 180
           + L  SGG  D +++SKSLEALALRKRA+ E+E+G+FSQA+L LS               
Sbjct: 121 MGLSGSGGGYDPLSVSKSLEALALRKRAETEMEEGDFSQADLHLS--------------- 180

Query: 181 GFNLLQAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDA 240
                QAI LKPCGGIHIIFKDRSIVRL  GN+SGALEDANEAL+VAP+Y E YICQGDA
Sbjct: 181 -----QAIELKPCGGIHIIFKDRSIVRLAQGNYSGALEDANEALKVAPQYTEGYICQGDA 240

Query: 241 FIAMDHFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAV 280
           F AMDHFDSAETSYSTALEIDPSIRRSKSFKARV KLQ KLSAV
Sbjct: 241 FFAMDHFDSAETSYSTALEIDPSIRRSKSFKARVDKLQEKLSAV 256

[Close]

BLAST of Lsi02G000360 vs. NCBI nr
Match: XP_038894326.1 (uncharacterized protein LOC120082956 [Benincasa hispida])

HSP 1 Score: 450.3 bits (1157), Expect = 1.2e-122
Identity = 244/287 (85.02%), Postives = 249/287 (86.76%), Query Frame = 0


Query: 1   MKGSVCFLCAPLPFLPNQTSF---SSSSSSSSSSSNSISKPSPIHA--HTHDQEIRVCTN 60
           MKGSVCFLCAPLPFLPNQ SF   SSSSSSSSSSSNSISK  PIHA  HTH QEIRVCTN
Sbjct: 1   MKGSVCFLCAPLPFLPNQPSFSSSSSSSSSSSSSSNSISKRIPIHAQTHTHHQEIRVCTN 60

Query: 61  RTCRRQGSFHTLEILNALAPPTITVNSSGCLGRCGAGPNVAVLPDGFVVAHCGTPARAAE 120
           RTCRRQGSFH LEILNALAPPTITVNSSGCLGRCGAGPNVAVLPDGFVV HCGTPARAAE
Sbjct: 61  RTCRRQGSFHALEILNALAPPTITVNSSGCLGRCGAGPNVAVLPDGFVVGHCGTPARAAE 120

Query: 121 VIIQLSGGDSDSVAISKSLEALALRKRAQCELEDGNFSQAELLLSQSENFVQNNTLCMMP 180
           VIIQLSGGDSDSV +SKSLEALALRKRAQCELED NFSQA+LLLS               
Sbjct: 121 VIIQLSGGDSDSVGVSKSLEALALRKRAQCELEDRNFSQADLLLS--------------- 180

Query: 181 GFNLLQAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDA 240
                QAI LKPCGGIHIIFKDRSIVRL LGNHSGALEDANEALR+AP YLEAYICQGDA
Sbjct: 181 -----QAIDLKPCGGIHIIFKDRSIVRLALGNHSGALEDANEALRIAPHYLEAYICQGDA 240

Query: 241 FIAMDHFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAVRTQ 283
            +AM+HFDSAETSYSTALEIDPSIRRSKSFKARVAKLQ KLSAVRTQ
Sbjct: 241 LLAMNHFDSAETSYSTALEIDPSIRRSKSFKARVAKLQEKLSAVRTQ 267

[Close]

BLAST of Lsi02G000360 vs. NCBI nr
Match: XP_004137391.1 (uncharacterized protein LOC101213093 [Cucumis sativus] >XP_031740366.1 uncharacterized protein LOC101213093 [Cucumis sativus] >KGN63963.1 hypothetical protein Csa_013052 [Cucumis sativus])

HSP 1 Score: 423.7 bits (1088), Expect = 1.2e-114
Identity = 229/282 (81.21%), Postives = 237/282 (84.04%), Query Frame = 0


Query: 1   MKGSVCFLCAPLPFLPNQTSFSSSSSSSSSSSNSISKPSPIHAHTHDQEIRVCTNRTCRR 60
           MKGSVCFLC  LPFLPN      + +S SSSS+SISK S IHA TH QEIRVCTNRTCRR
Sbjct: 1   MKGSVCFLCGSLPFLPN-----PNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRR 60

Query: 61  QGSFHTLEILNALAPPTITVNSSGCLGRCGAGPNVAVLPDGFVVAHCGTPARAAEVIIQL 120
           QGSFH LEILNALAPP I VN SGCLG+CGAGPNVAVLPDGFVV HCGTPARAA++IIQL
Sbjct: 61  QGSFHALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQL 120

Query: 121 SGGDSDSVAISKSLEALALRKRAQCELEDGNFSQAELLLSQSENFVQNNTLCMMPGFNLL 180
           SG DSDSV ISKSLEALALRKRAQCELEDGNFSQAELLLS                    
Sbjct: 121 SGQDSDSVGISKSLEALALRKRAQCELEDGNFSQAELLLS-------------------- 180

Query: 181 QAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAMD 240
           QAI LKPCGGIHIIFKDRSIVRL LGNHSGALEDANEALRVAP+YLEAYICQGDAF+AMD
Sbjct: 181 QAIDLKPCGGIHIIFKDRSIVRLALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMD 240

Query: 241 HFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAVRTQ 283
           HFDSAE SYSTALEIDPSIRRSKSFKARVAKLQ KLSAVRTQ
Sbjct: 241 HFDSAEISYSTALEIDPSIRRSKSFKARVAKLQEKLSAVRTQ 257

[Close]

BLAST of Lsi02G000360 vs. NCBI nr
Match: XP_008437609.1 (PREDICTED: tetratricopeptide repeat protein 1 [Cucumis melo])

HSP 1 Score: 412.9 bits (1060), Expect = 2.2e-111
Identity = 223/282 (79.08%), Postives = 235/282 (83.33%), Query Frame = 0


Query: 1   MKGSVCFLCAPLPFLPNQTSFSSSSSSSSSSSNSISKPSPIHAHTHDQEIRVCTNRTCRR 60
           MKGSVCFLCA LPFLPN      + +S SSSS+SISK S IHA TH QEIRVCTNRTCRR
Sbjct: 1   MKGSVCFLCASLPFLPN-----PNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRR 60

Query: 61  QGSFHTLEILNALAPPTITVNSSGCLGRCGAGPNVAVLPDGFVVAHCGTPARAAEVIIQL 120
           QGSF  LEIL+ALAPPTI VN SGCLG+CGAGPNVAVLPDGFV+ HCGTPARAA++IIQL
Sbjct: 61  QGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCGTPARAADLIIQL 120

Query: 121 SGGDSDSVAISKSLEALALRKRAQCELEDGNFSQAELLLSQSENFVQNNTLCMMPGFNLL 180
           SG DSDSV +SKSLEALALRKRAQCELEDGNFSQAELLLS                    
Sbjct: 121 SGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLS-------------------- 180

Query: 181 QAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAMD 240
           QAI L PCGGIHIIFKDRS+VRL LGNHSGALEDANEALRVAP+YLEAYICQGD F+AMD
Sbjct: 181 QAIDLIPCGGIHIIFKDRSVVRLALGNHSGALEDANEALRVAPQYLEAYICQGDVFLAMD 240

Query: 241 HFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAVRTQ 283
            FDSAE SYSTALEIDPSIRRSKSFKARVAKLQ KLSAVRTQ
Sbjct: 241 KFDSAEISYSTALEIDPSIRRSKSFKARVAKLQEKLSAVRTQ 257

[Close]

BLAST of Lsi02G000360 vs. NCBI nr
Match: XP_022923908.1 (small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1 [Cucurbita moschata])

HSP 1 Score: 382.9 bits (982), Expect = 2.4e-102
Identity = 207/282 (73.40%), Postives = 227/282 (80.50%), Query Frame = 0


Query: 1   MKGSVCFLCAPLPFLPNQTSFSSSSSSSSSSSNSISKPSPIHAHTHDQEIRVCTNRTCRR 60
           M  ++C LC PL F PN+TSFSS+S S           +PI A   +QEIRVCTNRTCRR
Sbjct: 1   MTATLCLLCIPLRFPPNRTSFSSTSISL----------TPIRA--QNQEIRVCTNRTCRR 60

Query: 61  QGSFHTLEILNALAPPTITVNSSGCLGRCGAGPNVAVLPDGFVVAHCGTPARAAEVIIQL 120
           QGSF TLE L+ALAPPTITVN SGCLG+CGAGPNVAVLPDGFVV HC TPARAAEVI+QL
Sbjct: 61  QGSFQTLETLSALAPPTITVNPSGCLGKCGAGPNVAVLPDGFVVGHCATPARAAEVIMQL 120

Query: 121 SGGDSDSVAISKSLEALALRKRAQCELEDGNFSQAELLLSQSENFVQNNTLCMMPGFNLL 180
           SGG SDS+ +SKSLEALALRKRA+CE+EDGNFSQA+LLLS                    
Sbjct: 121 SGGVSDSLGVSKSLEALALRKRAECEVEDGNFSQADLLLS-------------------- 180

Query: 181 QAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAMD 240
           +AI LKPCGGIHIIFKDRSIVRL LGNH+GALEDANEALRVAPRY EAYICQGD F++MD
Sbjct: 181 KAIELKPCGGIHIIFKDRSIVRLALGNHAGALEDANEALRVAPRYPEAYICQGDVFLSMD 240

Query: 241 HFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAVRTQ 283
           HFDSAE SYSTALEI+PSIRRSKSFKARVAKLQ KL+AVRTQ
Sbjct: 241 HFDSAEMSYSTALEIEPSIRRSKSFKARVAKLQEKLNAVRTQ 250

[Close]

BLAST of Lsi02G000360 vs. NCBI nr
Match: XP_023519354.1 (small glutamine-rich tetratricopeptide repeat-containing protein beta [Cucurbita pepo subsp. pepo])

HSP 1 Score: 381.3 bits (978), Expect = 7.1e-102
Identity = 207/282 (73.40%), Postives = 226/282 (80.14%), Query Frame = 0


Query: 1   MKGSVCFLCAPLPFLPNQTSFSSSSSSSSSSSNSISKPSPIHAHTHDQEIRVCTNRTCRR 60
           M  ++C LC PL F PN+TSFSS+S S           +PI A   +QEIRVCTNRTCRR
Sbjct: 1   MTATLCLLCIPLRFPPNRTSFSSTSISL----------TPIRA--QNQEIRVCTNRTCRR 60

Query: 61  QGSFHTLEILNALAPPTITVNSSGCLGRCGAGPNVAVLPDGFVVAHCGTPARAAEVIIQL 120
           QGSF TLE L+ALAPPTITVN SGCLG+CGAGPNVAVLPDGFVV HC TPARAAEVI+QL
Sbjct: 61  QGSFQTLETLSALAPPTITVNPSGCLGKCGAGPNVAVLPDGFVVGHCATPARAAEVIMQL 120

Query: 121 SGGDSDSVAISKSLEALALRKRAQCELEDGNFSQAELLLSQSENFVQNNTLCMMPGFNLL 180
           SGG SDS+ +SKSLEALAL KRA+CE+EDGNFSQA+LLLS                    
Sbjct: 121 SGGVSDSLGVSKSLEALALWKRAECEVEDGNFSQADLLLS-------------------- 180

Query: 181 QAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAMD 240
           +AI LKPCGGIHIIFKDRSIVRL LGNH+GALEDANEALRVAPRY EAYICQGD F++MD
Sbjct: 181 KAIELKPCGGIHIIFKDRSIVRLALGNHAGALEDANEALRVAPRYPEAYICQGDVFLSMD 240

Query: 241 HFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAVRTQ 283
           HFDSAE SYSTALEIDPSIRRSKSFKARVAKLQ KL+AVRTQ
Sbjct: 241 HFDSAEMSYSTALEIDPSIRRSKSFKARVAKLQEKLNAVRTQ 250

[Close]

BLAST of Lsi02G000360 vs. TAIR 10
Match: AT3G17670.1 (tetratricopeptide repeat (TPR)-containing protein )

HSP 1 Score: 234.6 bits (597), Expect = 9.9e-62
Identity = 122/232 (52.59%), Postives = 155/232 (66.81%), Query Frame = 0


Query: 48  QEIRVCTNRTCRRQGSFHTLEILNALAPPTITVNSSGCLGRCGAGPNVAVLPDGFVVAHC 107
           +EIRVCTNRTCRRQGSF  LE L ALAPP + V    CLGRCG+GPN+  LP G ++ HC
Sbjct: 19  KEIRVCTNRTCRRQGSFQILETLTALAPPELRVTHCACLGRCGSGPNLVALPQGLILRHC 78

Query: 108 GTPARAAEVIIQLSGGD---SDSVAISKSLEALALRKRAQCELEDGNFSQAELLLSQSEN 167
            TP+RAAE++  L G     S S A++ +L ALAL   A  +++ GNFS+AE LL+    
Sbjct: 79  ATPSRAAEILFSLCGDGREASSSSAVTDALTALALTNNALSQIDAGNFSEAEALLT---- 138

Query: 168 FVQNNTLCMMPGFNLLQAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPR 227
                           QA+ LKP GG+H IFK RS+ +L + ++SGALED ++AL +AP 
Sbjct: 139 ----------------QALELKPYGGLHRIFKHRSVAKLGMLDYSGALEDISQALALAPN 198

Query: 228 YLEAYICQGDAFIAMDHFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKL 277
           Y E YICQGD ++A   +D AE SY T LEIDPS+RRSK FKAR+AKLQ K+
Sbjct: 199 YSEPYICQGDVYVAKGQYDLAEKSYLTCLEIDPSLRRSKPFKARIAKLQQKV 230

[Close]

BLAST of Lsi02G000360 vs. TAIR 10
Match: AT3G17670.2 (tetratricopeptide repeat (TPR)-containing protein )

HSP 1 Score: 234.6 bits (597), Expect = 9.9e-62
Identity = 122/232 (52.59%), Postives = 155/232 (66.81%), Query Frame = 0


Query: 48  QEIRVCTNRTCRRQGSFHTLEILNALAPPTITVNSSGCLGRCGAGPNVAVLPDGFVVAHC 107
           +EIRVCTNRTCRRQGSF  LE L ALAPP + V    CLGRCG+GPN+  LP G ++ HC
Sbjct: 19  KEIRVCTNRTCRRQGSFQILETLTALAPPELRVTHCACLGRCGSGPNLVALPQGLILRHC 78

Query: 108 GTPARAAEVIIQLSGGD---SDSVAISKSLEALALRKRAQCELEDGNFSQAELLLSQSEN 167
            TP+RAAE++  L G     S S A++ +L ALAL   A  +++ GNFS+AE LL+    
Sbjct: 79  ATPSRAAEILFSLCGDGREASSSSAVTDALTALALTNNALSQIDAGNFSEAEALLT---- 138

Query: 168 FVQNNTLCMMPGFNLLQAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPR 227
                           QA+ LKP GG+H IFK RS+ +L + ++SGALED ++AL +AP 
Sbjct: 139 ----------------QALELKPYGGLHRIFKHRSVAKLGMLDYSGALEDISQALALAPN 198

Query: 228 YLEAYICQGDAFIAMDHFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKL 277
           Y E YICQGD ++A   +D AE SY T LEIDPS+RRSK FKAR+AKLQ K+
Sbjct: 199 YSEPYICQGDVYVAKGQYDLAEKSYLTCLEIDPSLRRSKPFKARIAKLQQKV 230

[Close]

BLAST of Lsi02G000360 vs. TAIR 10
Match: AT4G12400.1 (stress-inducible protein, putative )

HSP 1 Score: 56.6 bits (135), Expect = 3.7e-08
Identity = 32/84 (38.10%), Postives = 44/84 (52.38%), Query Frame = 0


Query: 181 QAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAMD 240
           +AI L P    HI++ +RS    +L  +  AL DA + + + P + + Y   G AFI + 
Sbjct: 27  EAINLSPTN--HILYSNRSASYASLHRYEEALSDAKKTIELKPDWSKGYSRLGAAFIGLS 86

Query: 241 HFDSAETSYSTALEIDPSIRRSKS 265
            FD A  SY   LEIDPS    KS
Sbjct: 87  KFDEAVDSYKKGLEIDPSNEMLKS 108

[Close]

BLAST of Lsi02G000360 vs. TAIR 10
Match: AT4G12400.2 (stress-inducible protein, putative )

HSP 1 Score: 56.6 bits (135), Expect = 3.7e-08
Identity = 32/84 (38.10%), Postives = 44/84 (52.38%), Query Frame = 0


Query: 181 QAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAMD 240
           +AI L P    HI++ +RS    +L  +  AL DA + + + P + + Y   G AFI + 
Sbjct: 27  EAINLSPTN--HILYSNRSASYASLHRYEEALSDAKKTIELKPDWSKGYSRLGAAFIGLS 86

Query: 241 HFDSAETSYSTALEIDPSIRRSKS 265
            FD A  SY   LEIDPS    KS
Sbjct: 87  KFDEAVDSYKKGLEIDPSNEMLKS 108

[Close]

BLAST of Lsi02G000360 vs. TAIR 10
Match: AT1G12270.1 (stress-inducible protein, putative )

HSP 1 Score: 53.9 bits (128), Expect = 2.4e-07
Identity = 29/100 (29.00%), Postives = 57/100 (57.00%), Query Frame = 0


Query: 181 QAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAMD 240
           +AI L P    H++F +RS    +L  ++ AL DA E +++ P + + Y   G A + ++
Sbjct: 27  EAIALAPTN--HVLFSNRSAAHASLHQYAEALSDAKETIKLKPYWPKGYSRLGAAHLGLN 86

Query: 241 HFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAVR 281
            F+ A T+Y   L++DP+   +++ K+ +A  +A ++  R
Sbjct: 87  QFELAVTAYKKGLDVDPT---NEALKSGLADAEASVARSR 121

The following BLAST results are available for this feature:

BLAST of Lsi02G000360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STH1	5.2e-07	38.10	Hsp70-Hsp90 organizing protein 3 OS=Arabidopsis thaliana OX=3702 GN=HOP3 PE=2 SV...	[more]
Q9LNB6	3.4e-06	29.00	Hsp70-Hsp90 organizing protein 1 OS=Arabidopsis thaliana OX=3702 GN=HOP1 PE=2 SV...	[more]
Q96EQ0	5.8e-06	31.31	Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Homo sa...	[more]
P15705	5.8e-06	32.93	Heat shock protein STI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)...	[more]
Q8VD33	1.3e-05	31.31	Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Mus mus...	[more]

BLAST of Lsi02G000360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQA2	6.0e-115	81.21	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G031840 ...	[more]
A0A1S3AUF9	1.1e-111	79.08	tetratricopeptide repeat protein 1 OS=Cucumis melo OX=3656 GN=LOC103482942 PE=4 ...	[more]
A0A6J1EAV3	1.2e-102	73.40	small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1...	[more]
A0A6J1KQA5	7.1e-100	71.99	uncharacterized protein LOC111495518 OS=Cucurbita maxima OX=3661 GN=LOC111495518...	[more]
A0A6J1C6P2	1.1e-95	70.07	sperm-associated antigen 1 OS=Momordica charantia OX=3673 GN=LOC111008751 PE=4 S...	[more]

BLAST of Lsi02G000360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894326.1	1.2e-122	85.02	uncharacterized protein LOC120082956 [Benincasa hispida]	[more]
XP_004137391.1	1.2e-114	81.21	uncharacterized protein LOC101213093 [Cucumis sativus] >XP_031740366.1 uncharact...	[more]
XP_008437609.1	2.2e-111	79.08	PREDICTED: tetratricopeptide repeat protein 1 [Cucumis melo]	[more]
XP_022923908.1	2.4e-102	73.40	small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1...	[more]
XP_023519354.1	7.1e-102	73.40	small glutamine-rich tetratricopeptide repeat-containing protein beta [Cucurbita...	[more]

BLAST of Lsi02G000360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17670.1	9.9e-62	52.59	tetratricopeptide repeat (TPR)-containing protein	[more]
AT3G17670.2	9.9e-62	52.59	tetratricopeptide repeat (TPR)-containing protein	[more]
AT4G12400.1	3.7e-08	38.10	stress-inducible protein, putative	[more]
AT4G12400.2	3.7e-08	38.10	stress-inducible protein, putative	[more]
AT1G12270.1	2.4e-07	29.00	stress-inducible protein, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 192..225 e-value: 41.0 score: 9.5 coord: 136..169 e-value: 62.0 score: 8.0 coord: 226..259 e-value: 0.024 score: 23.8
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 226..259 score: 9.7944
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 129..282 e-value: 2.6E-15 score: 58.4
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 135..273
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 47..128 e-value: 1.8E-8 score: 36.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..47
None	No IPR available	PANTHER	PTHR47682	TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN	coord: 16..281
None	No IPR available	CDD	cd02980	TRX_Fd_family	coord: 50..117 e-value: 8.54446E-14 score: 63.4152
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 48..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G000360.1	Lsi02G000360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding