Lsi02G000320 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATGGTGTCTTCTTGAGGTTCCTTGCGTTGAGAAAATGTTAAATTTCAATTTTTACCTTCTGTTGAAGTATATGTGAGTTTACTTTCGTTGGTTAAAATCAGAAGGAATGGTGTTTCTCACCATTTTTTCCCAACAATATGATAGTGTACAAAACTGCAAATAAGAAAATGCTAATGAAATACCATTACCATTAATGAAATTACCATACTTTACAGGACTTTTTGGTTTTGACATTTGCAGATAATATTGATTTTAGGCGACATGAGTTCAAGATTGATTTGAAATTACTTTTTAGGGAGATGGAGACATGATTTGAGTCTTGAGATGATTGTTATTAACCTTTTATTTTTTTTTTTGGAAGAATTTGCTTTGTTTTAGTTGGTGTGGTGGAGATTTTGCTAATTTCAATCTACTTTTGACAGTTTCCTAATTTTCTTAACTTACAATTTGATGCAGTTGATTTGACTTCTATTTTTGAAGTCAGGTCAAGTTGGGTTAATCATCATTCATCGCTTAAATGGGAGTGTACTTGTTCAAGTGTACATTAGCTTCCATTCCAAATCATTATTTAACAATGATTTTGCTATGCCCAAAAAAAAAAAAAAAAAAAAAAAATCTGCTAGTAAAAGTAGAATTAGAAAAATTAATTAATTTTAAATTCTGTAAAAAGAAAACATAACAAGTTTAATCTTTGGTCTCTCAACTTTTTTTTTTCTTTCTAATTCAGTCTCTCATCTTTAGGAGTTTTGTTAACTTTTTAAATTTTTAATTTGTGTCGAATATGTCATTAACCCTAAACTATCAACCATTTCTTTAATAGATACAAAATTAAAAATTTATCAAACATAATATTTTGTTTTGTTAACTTTCTAAACTTTAATTTGTGTCAAATATGCCATTGAACACTAAATTATCAACATTATCTTTAATAGATTCAAAATCGAAAGTTTATCAAATATAATATTCAATTTTAAATCTAATATAATGTTTTTTAATATTATGATCTAGACAGAAAAAAGTTTATAAAAAAAAATTATTTTATTTTTTATTTTTCTGTTTGAAGTGTTTTTAGATTTAAAATTAAATTTGAACGATTATAAAAAGTGAATAACTGGTAGTTAAAAAAGAAAGAAAGAAAAAAAGTGAAAAACTGTTATGGTTTTATAAAAGGCGGGAAGGAGGTGTATGTAATGCATGAAATTGAATCTACTCTGAGTCTCTCCGGTTCTCTTCTCTTTCACTCTGTCCTCCTCCTCTTCTCGCCGCACCTTCTTCTTGCAGCTGCTTTCTTCCAATTTGAAGAACCACCGTCCGGTACTTGGAGTGCCACTGGACGAACACAAGAAGCAATTCCTGGTATGATTTAAATTTATCGCCCCACTGCTCTCCTCGATTCTTGCAAGGTCATTACGATTCTTCGTGATTTCTTTAATTTTTCTATCGATCTTGATATTTTCTTTAGTTCCACTTCTTCCTTTGTAACTTTTCCTTTGTCGATTTTCTGTGGATGTAGAGATTTGGACCAAAATGGAGGCACCGAGACCGGGCTGGGCAGTGAGGATGATAATCGTGATGGTAATTACGGCAATTTTCTTTCGCTGCGTCACTGCCACCAACCATTCCGTTGGTGGATCTTCTGGTTGGGATCTCAATTCCAACATCCTTGCTTGGTCTGCGGCCACCACGTTCCAAGTCGGTGACTATCTCGGTTCGTTCATTTCTCCTCTGTTTTTCCCCTGCCCTTTGAAANAAAAAAAAAAAAAAAAAAAAAAAAAATCTGCTAGTAAAAGTAGAATTAGAAAAATTAATTAATTTTAAATTCTGTAAAAAGAAAACATAACAAGTTTAATCTTTGGTCTCTCAACTTTTTTTTTTCTTTCTAATTCAGTCTCTCATCTTTAGGAGTTTTGTTAACTTTTTAAATTTTTAATTTGTGTCGAATATGTCATTAACCCTAAACTATCAACCATTTCTTTAATAGATACAAAATTAAAAATTTATCAAACATAATATTTTGTTTTGTTAACTTTCTAAACTTTAATTTGTGTCAAATATGCCATTGAACACTAAATTATCAACATTATCTTTAATAGATTCAAAATCGAAAGTTTATCAAATATAATATTCAATTTTAAATCTAATATAATGTTTTTTAATATTATGATCTAGACAGAAAAAAGTTTATAAAAAAAAATTATTTTATTTTTTATTTTTCTGTTTGAAGTGTTTTTAGATTTAAAATTAAATTTGAACGATTATAAAAAGTGAATAACTGGTAGTTAAAAAAGAAAGAAAGAAAAAAAGTGAAAAACTGTTATGGTTTTATAAAAGGCGGGAAGGAGGTGTATGTAATGCATGAAATTGAATCTACTCTGAGTCTCTCCGGTTCTCTTCTCTTTCACTCTGTCCTCCTCCTCTTCTCGCCGCACCTTCTTCTTGCAGCTGCTTTCTTCCAATTTGAAGAACCACCGTCCGGTACTTGGAGTGCCACTGGACGAACACAAGAAGCAATTCCTGGTATGATTTAAATTTATCGCCCCACTGCTCTCCTCGATTCTTGCAAGGTCATTACGATTCTTCGTGATTTCTTTAATTTTTCTATCGATCTTGATATTTTCTTTAGTTCCACTTCTTCCTTTGTAACTTTTCCTTTGTCGATTTTCTGTGGATGTAGAGATTTGGACCAAAATGGAGGCACCGAGACCGGGCTGGGCAGTGAGGATGATAATCGTGATGGTAATTACGGCAATTTTCTTTCGCTGCGTCACTGCCACCAACCATTCCGTTGGTGGATCTTCTGGTTGGGATCTCAATTCCAACATCCTTGCTTGGTCTGCGGCCACCACGTTCCAAGTCGGTGACTATCTCGGTTCGTTCATTTCTCCTCTGTTTTTCCCCTGCCCTTTGAAAACACATCTTCAATTCAGTTTTTATGTCGTGTACTTTGATCTTTGCTAAGTTCTCTGTTCGATGATCATTGTGAATTCAAGAATCTTGATTTTCATGCAATTTTCTTGAATTATTTTCCTTGCGAGTTCCAACTATTGCTTGCGCTGACATTCTTGTACTCTAATTATAACTGATCACTTGAATTTGTTTGATTGTAAATACATATGTAAATACAAATACAGTCGTTCTTTAATAGTGACTGTAATCCAATTTATTCAATTGTTTATCACTGTTAGAGCAACTGCATGACTCTGTTTTCTTGAATCAATCAATCCACATTTCTTACGCATGTTTAAAATCACTTAGAAACAAACATGAAATTGATTTCAACCATTCCAAAATCTCGTCTCTCAAAGTTGTAGTTAGTTAAATTTTGGTTAAAATGTGGTACAGTGTTCAAGTACTTGCCAGTTCACGACGTGCTGGAAGTGAACCGAACAGATTTCTTCAATTGCCGCACCGTGAACCCAATGAGCACCCACAGTGATGGAGAGACAGTGTTCCACCTGAACCAACTAGGCAGTCGCTACTTCATATGCGGCCGCCCTCAACACTGCCTCAGGGGTCTTAAGCTCCGAGTCCAAGTCCTCCAACGCTTGACCGACGCCAACAATTCAACGCACGGCGGCGCTAACCAAGAGGAGCGACTTAGGCCACGCCGCCCTCCTCGGTCTCCTCCCTCACCTTCTTCTCCATCTATTGAACGCCCACCAATGCCTGACCTTCCGGTGGCGCCATCGCCTTGCAGTTGTTCCGGAGTGGGCGAGATGATGATGAAAAATGTCCCAATTAACTGGTGTTTCGTGTTGCTCTTGATTATGCTTACTTTCATTCCTTGA ATGAATGGCGGGAAGGAGGTGTATGTAATGCATGAAATTGAATCTACTCTGAGTCTCTCCGGTTCTCTTCTCTTTCACTCTGTCCTCCTCCTCTTCTCGCCGCACCTTCTTCTTGCAGCTGCTTTCTTCCAATTTGAAGAACCACCGTCCGGTACTTGGAGTGCCACTGGACGAACACAAGAAGCAATTCCTGAGATTTGGACCAAAATGGAGGCACCGAGACCGGGCTGGGCAGTGAGGATGATAATCGTGATGGTAATTACGGCAATTTTCTTTCGCTGCGTCACTGCCACCAACCATTCCGTTGGTGGATCTTCTGGCGGGAAGGAGGTGTATGTAATGCATGAAATTGAATCTACTCTGAGTCTCTCCGGTTCTCTTCTCTTTCACTCTGTCCTCCTCCTCTTCTCGCCGCACCTTCTTCTTGCAGCTGCTTTCTTCCAATTTGAAGAACCACCGTCCGGTACTTGGAGTGCCACTGGACGAACACAAGAAGCAATTCCTGAGATTTGGACCAAAATGGAGGCACCGAGACCGGGCTGGGCAGTGAGGATGATAATCGTGATGGTAATTACGGCAATTTTCTTTCGCTGCGTCACTGCCACCAACCATTCCGTTGGTGGATCTTCTGGTTGGGATCTCAATTCCAACATCCTTGCTTGGTCTGCGGCCACCACGTTCCAAGTCGGTGACTATCTCGTGTTCAAGTACTTGCCAGTTCACGACGTGCTGGAAGTGAACCGAACAGATTTCTTCAATTGCCGCACCGTGAACCCAATGAGCACCCACAGTGATGGAGAGACAGTGTTCCACCTGAACCAACTAGGCAGTCGCTACTTCATATGCGGCCGCCCTCAACACTGCCTCAGGGGTCTTAAGCTCCGAGTCCAAGTCCTCCAACGCTTGACCGACGCCAACAATTCAACGCACGGCGGCGCTAACCAAGAGGAGCGACTTAGGCCACGCCGCCCTCCTCGGTCTCCTCCCTCACCTTCTTCTCCATCTATTGAACGCCCACCAATGCCTGACCTTCCGGTGGCGCCATCGCCTTGCAGTTGTTCCGGAGTGGGCGAGATGATGATGAAAAATGTCCCAATTAACTGGTGTTTCGTGTTGCTCTTGATTATGCTTACTTTCATTCCTTGA ATGAATGGCGGGAAGGAGGTGTATGTAATGCATGAAATTGAATCTACTCTGAGTCTCTCCGGTTCTCTTCTCTTTCACTCTGTCCTCCTCCTCTTCTCGCCGCACCTTCTTCTTGCAGCTGCTTTCTTCCAATTTGAAGAACCACCGTCCGGTACTTGGAGTGCCACTGGACGAACACAAGAAGCAATTCCTGAGATTTGGACCAAAATGGAGGCACCGAGACCGGGCTGGGCAGTGAGGATGATAATCGTGATGGTAATTACGGCAATTTTCTTTCGCTGCGTCACTGCCACCAACCATTCCGTTGGTGGATCTTCTGGCGGGAAGGAGGTGTATGTAATGCATGAAATTGAATCTACTCTGAGTCTCTCCGGTTCTCTTCTCTTTCACTCTGTCCTCCTCCTCTTCTCGCCGCACCTTCTTCTTGCAGCTGCTTTCTTCCAATTTGAAGAACCACCGTCCGGTACTTGGAGTGCCACTGGACGAACACAAGAAGCAATTCCTGAGATTTGGACCAAAATGGAGGCACCGAGACCGGGCTGGGCAGTGAGGATGATAATCGTGATGGTAATTACGGCAATTTTCTTTCGCTGCGTCACTGCCACCAACCATTCCGTTGGTGGATCTTCTGGTTGGGATCTCAATTCCAACATCCTTGCTTGGTCTGCGGCCACCACGTTCCAAGTCGGTGACTATCTCGTGTTCAAGTACTTGCCAGTTCACGACGTGCTGGAAGTGAACCGAACAGATTTCTTCAATTGCCGCACCGTGAACCCAATGAGCACCCACAGTGATGGAGAGACAGTGTTCCACCTGAACCAACTAGGCAGTCGCTACTTCATATGCGGCCGCCCTCAACACTGCCTCAGGGGTCTTAAGCTCCGAGTCCAAGTCCTCCAACGCTTGACCGACGCCAACAATTCAACGCACGGCGGCGCTAACCAAGAGGAGCGACTTAGGCCACGCCGCCCTCCTCGGTCTCCTCCCTCACCTTCTTCTCCATCTATTGAACGCCCACCAATGCCTGACCTTCCGGTGGCGCCATCGCCTTGCAGTTGTTCCGGAGTGGGCGAGATGATGATGAAAAATGTCCCAATTAACTGGTGTTTCGTGTTGCTCTTGATTATGCTTACTTTCATTCCTTGA MNGGKEVYVMHEIESTLSLSGSLLFHSVLLLFSPHLLLAAAFFQFEEPPSGTWSATGRTQEAIPEIWTKMEAPRPGWAVRMIIVMVITAIFFRCVTATNHSVGGSSGGKEVYVMHEIESTLSLSGSLLFHSVLLLFSPHLLLAAAFFQFEEPPSGTWSATGRTQEAIPEIWTKMEAPRPGWAVRMIIVMVITAIFFRCVTATNHSVGGSSGWDLNSNILAWSAATTFQVGDYLVFKYLPVHDVLEVNRTDFFNCRTVNPMSTHSDGETVFHLNQLGSRYFICGRPQHCLRGLKLRVQVLQRLTDANNSTHGGANQEERLRPRRPPRSPPSPSSPSIERPPMPDLPVAPSPCSCSGVGEMMMKNVPINWCFVLLLIMLTFIP Homology
BLAST of Lsi02G000320 vs. ExPASy Swiss-Prot
Match: O82081 (Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 3.5e-22 Identity = 71/197 (36.04%), Postives = 102/197 (51.78%), Query Frame = 0
BLAST of Lsi02G000320 vs. ExPASy Swiss-Prot
Match: Q41001 (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 3.2e-15 Identity = 42/99 (42.42%), Postives = 58/99 (58.59%), Query Frame = 0
BLAST of Lsi02G000320 vs. ExPASy Swiss-Prot
Match: Q9SK27 (Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 SV=2) HSP 1 Score: 77.0 bits (188), Expect = 5.0e-13 Identity = 44/119 (36.97%), Postives = 68/119 (57.14%), Query Frame = 0
BLAST of Lsi02G000320 vs. ExPASy Swiss-Prot
Match: Q9T076 (Early nodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g27520 PE=1 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 6.6e-13 Identity = 54/166 (32.53%), Postives = 75/166 (45.18%), Query Frame = 0
BLAST of Lsi02G000320 vs. ExPASy Swiss-Prot
Match: P80728 (Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 4.3e-12 Identity = 36/101 (35.64%), Postives = 60/101 (59.41%), Query Frame = 0
BLAST of Lsi02G000320 vs. ExPASy TrEMBL
Match: A0A5A7SZN3 (Chemocyanin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00500 PE=4 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 3.7e-91 Identity = 175/210 (83.33%), Postives = 183/210 (87.14%), Query Frame = 0
BLAST of Lsi02G000320 vs. ExPASy TrEMBL
Match: A0A1S3AT69 (chemocyanin-like OS=Cucumis melo OX=3656 GN=LOC103482701 PE=4 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 3.7e-91 Identity = 175/210 (83.33%), Postives = 183/210 (87.14%), Query Frame = 0
BLAST of Lsi02G000320 vs. ExPASy TrEMBL
Match: A0A0A0LSJ2 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G031800 PE=4 SV=1) HSP 1 Score: 340.1 bits (871), Expect = 1.2e-89 Identity = 173/210 (82.38%), Postives = 181/210 (86.19%), Query Frame = 0
BLAST of Lsi02G000320 vs. ExPASy TrEMBL
Match: A0A6J1EBH8 (uclacyanin 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431657 PE=4 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 1.2e-81 Identity = 162/215 (75.35%), Postives = 175/215 (81.40%), Query Frame = 0
BLAST of Lsi02G000320 vs. ExPASy TrEMBL
Match: A0A6J1KLQ1 (uclacyanin 1-like OS=Cucurbita maxima OX=3661 GN=LOC111495322 PE=4 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 3.8e-80 Identity = 159/215 (73.95%), Postives = 174/215 (80.93%), Query Frame = 0
BLAST of Lsi02G000320 vs. NCBI nr
Match: XP_038896032.1 (uclacyanin 1-like [Benincasa hispida]) HSP 1 Score: 372.9 bits (956), Expect = 3.4e-99 Identity = 186/208 (89.42%), Postives = 191/208 (91.83%), Query Frame = 0
BLAST of Lsi02G000320 vs. NCBI nr
Match: XP_008437239.1 (PREDICTED: chemocyanin-like [Cucumis melo] >KAA0036048.1 chemocyanin-like [Cucumis melo var. makuwa] >TYJ98855.1 chemocyanin-like [Cucumis melo var. makuwa]) HSP 1 Score: 345.1 bits (884), Expect = 7.6e-91 Identity = 175/210 (83.33%), Postives = 183/210 (87.14%), Query Frame = 0
BLAST of Lsi02G000320 vs. NCBI nr
Match: XP_004137571.1 (uclacyanin 1 [Cucumis sativus] >KGN63959.1 hypothetical protein Csa_014141 [Cucumis sativus]) HSP 1 Score: 340.1 bits (871), Expect = 2.4e-89 Identity = 173/210 (82.38%), Postives = 181/210 (86.19%), Query Frame = 0
BLAST of Lsi02G000320 vs. NCBI nr
Match: XP_023520324.1 (uclacyanin 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 315.1 bits (806), Expect = 8.4e-82 Identity = 162/215 (75.35%), Postives = 175/215 (81.40%), Query Frame = 0
BLAST of Lsi02G000320 vs. NCBI nr
Match: KAG6584434.1 (Uclacyanin 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020021.1 Uclacyanin 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 313.5 bits (802), Expect = 2.4e-81 Identity = 162/215 (75.35%), Postives = 175/215 (81.40%), Query Frame = 0
BLAST of Lsi02G000320 vs. TAIR 10
Match: AT2G32300.1 (uclacyanin 1 ) HSP 1 Score: 107.5 bits (267), Expect = 2.5e-23 Identity = 71/197 (36.04%), Postives = 102/197 (51.78%), Query Frame = 0
BLAST of Lsi02G000320 vs. TAIR 10
Match: AT2G31050.1 (Cupredoxin superfamily protein ) HSP 1 Score: 95.1 bits (235), Expect = 1.3e-19 Identity = 71/199 (35.68%), Postives = 95/199 (47.74%), Query Frame = 0
BLAST of Lsi02G000320 vs. TAIR 10
Match: AT5G07475.1 (Cupredoxin superfamily protein ) HSP 1 Score: 94.4 bits (233), Expect = 2.2e-19 Identity = 40/112 (35.71%), Postives = 68/112 (60.71%), Query Frame = 0
BLAST of Lsi02G000320 vs. TAIR 10
Match: AT3G60270.1 (Cupredoxin superfamily protein ) HSP 1 Score: 92.8 bits (229), Expect = 6.3e-19 Identity = 63/198 (31.82%), Postives = 99/198 (50.00%), Query Frame = 0
BLAST of Lsi02G000320 vs. TAIR 10
Match: AT2G26720.1 (Cupredoxin superfamily protein ) HSP 1 Score: 80.1 bits (196), Expect = 4.2e-15 Identity = 57/172 (33.14%), Postives = 80/172 (46.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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