Lsi02G000310 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G000310
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	DUF4408 domain protein
Location	chr02: 357079 .. 358023 (+)
RNA-Seq Expression	Lsi02G000310
Synteny	Lsi02G000310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTCATGCCTGATCCGTCACCAAAACCTGTGTTTCAAGGTTTGACATTAGAGACGGCAATCTCGGTTACAAAATCGATATTGCTCGCAATTGGGCTCATATCCACTGTAATTTTGTTCAAAGTGGCTATAATCCCAAAATTTGCGAGTCTTCTTACGACAACTCTTCCTCGATTATGGGTCTCCTTCAGATTATGGCTCTCTCCTCCTTACGTCTTCATCGTCTTCAACTTCCTTATCGTCGCCGCCTTCGCCTCCTCTGCCTTCCGCCGCCAAAAAGACACATCCGAAACTAATTACACTCCCATTTCTCATGAAAATACTCATGTGTCTGCATCCACTCCCTATAAATTGACGCATGAGGACCGAGACTTTTCGATCCGTGCTCGTTCCGGAGAAATCTGGAATGGGATCTCGGACGAGGATGAACAGGGGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGTAAACCGGTAAAATGGGATTTCCCGACTCTGTTCACTGAAAAATTCAGTGACCCATCATCGGAGAAGTTTTGTGCATATTCCAGCGAGAAGGTGGAGGAGGAAAAAGATATCGGGGGCGGCGGTGGCGATGACTCGATGGAGGCCACTTGGAAGGCGATCATGGAAAGGGAAGGGAAACAGACGCCGCAGCTGAAGAAGAGCCAGACATGGGACTCCCCTCCGCCGGCACGCTTAATTAGAGCCGCCGGTGGCGACGAGGAGCCAGTGGCGTGGGATCGGAATGAGGTAAGGAAGTCGGAGAAGTTCCAGCAAACGCTGTCGTTTCGGAGAAAGATATCGATGACTTCGGAAGAACTGAAGAGCCGGGCAGAGGCGTTCATAGAAATGGTAAACCGGGGCATCCGGTTACAGAGGCAAGAATCAGAGCAGCGATTCTTGCAGGCAATGAAACGTAGCTTTTAG

mRNA sequence

ATGGAGCTCATGCCTGATCCGTCACCAAAACCTGTGTTTCAAGGTTTGACATTAGAGACGGCAATCTCGGTTACAAAATCGATATTGCTCGCAATTGGGCTCATATCCACTGTAATTTTGTTCAAAGTGGCTATAATCCCAAAATTTGCGAGTCTTCTTACGACAACTCTTCCTCGATTATGGGTCTCCTTCAGATTATGGCTCTCTCCTCCTTACGTCTTCATCGTCTTCAACTTCCTTATCGTCGCCGCCTTCGCCTCCTCTGCCTTCCGCCGCCAAAAAGACACATCCGAAACTAATTACACTCCCATTTCTCATGAAAATACTCATGTGTCTGCATCCACTCCCTATAAATTGACGCATGAGGACCGAGACTTTTCGATCCGTGCTCGTTCCGGAGAAATCTGGAATGGGATCTCGGACGAGGATGAACAGGGGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGTAAACCGGTAAAATGGGATTTCCCGACTCTGTTCACTGAAAAATTCAGTGACCCATCATCGGAGAAGTTTTGTGCATATTCCAGCGAGAAGGTGGAGGAGGAAAAAGATATCGGGGGCGGCGGTGGCGATGACTCGATGGAGGCCACTTGGAAGGCGATCATGGAAAGGGAAGGGAAACAGACGCCGCAGCTGAAGAAGAGCCAGACATGGGACTCCCCTCCGCCGGCACGCTTAATTAGAGCCGCCGGTGGCGACGAGGAGCCAGTGGCGTGGGATCGGAATGAGGTAAGGAAGTCGGAGAAGTTCCAGCAAACGCTGTCGTTTCGGAGAAAGATATCGATGACTTCGGAAGAACTGAAGAGCCGGGCAGAGGCGTTCATAGAAATGGTAAACCGGGGCATCCGGTTACAGAGGCAAGAATCAGAGCAGCGATTCTTGCAGGCAATGAAACGTAGCTTTTAG

Coding sequence (CDS)

ATGGAGCTCATGCCTGATCCGTCACCAAAACCTGTGTTTCAAGGTTTGACATTAGAGACGGCAATCTCGGTTACAAAATCGATATTGCTCGCAATTGGGCTCATATCCACTGTAATTTTGTTCAAAGTGGCTATAATCCCAAAATTTGCGAGTCTTCTTACGACAACTCTTCCTCGATTATGGGTCTCCTTCAGATTATGGCTCTCTCCTCCTTACGTCTTCATCGTCTTCAACTTCCTTATCGTCGCCGCCTTCGCCTCCTCTGCCTTCCGCCGCCAAAAAGACACATCCGAAACTAATTACACTCCCATTTCTCATGAAAATACTCATGTGTCTGCATCCACTCCCTATAAATTGACGCATGAGGACCGAGACTTTTCGATCCGTGCTCGTTCCGGAGAAATCTGGAATGGGATCTCGGACGAGGATGAACAGGGGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGTAAACCGGTAAAATGGGATTTCCCGACTCTGTTCACTGAAAAATTCAGTGACCCATCATCGGAGAAGTTTTGTGCATATTCCAGCGAGAAGGTGGAGGAGGAAAAAGATATCGGGGGCGGCGGTGGCGATGACTCGATGGAGGCCACTTGGAAGGCGATCATGGAAAGGGAAGGGAAACAGACGCCGCAGCTGAAGAAGAGCCAGACATGGGACTCCCCTCCGCCGGCACGCTTAATTAGAGCCGCCGGTGGCGACGAGGAGCCAGTGGCGTGGGATCGGAATGAGGTAAGGAAGTCGGAGAAGTTCCAGCAAACGCTGTCGTTTCGGAGAAAGATATCGATGACTTCGGAAGAACTGAAGAGCCGGGCAGAGGCGTTCATAGAAATGGTAAACCGGGGCATCCGGTTACAGAGGCAAGAATCAGAGCAGCGATTCTTGCAGGCAATGAAACGTAGCTTTTAG

Protein sequence

MELMPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVSFRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTPISHENTHVSASTPYKLTHEDRDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEKFCAYSSEKVEEEKDIGGGGGDDSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRAAGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQRQESEQRFLQAMKRSF

Homology

[Close]

BLAST of Lsi02G000310 vs. ExPASy TrEMBL
Match: A0A5A7T393 (DUF4408 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00490 PE=4 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 5.4e-133
Identity = 266/311 (85.53%), Postives = 275/311 (88.42%), Query Frame = 0


Query: 4   MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVS 63
           M DPS KPVF GLTLETAIS+TKS+LLAIG ISTVILFKVAIIPKFASL   TLPRL+VS
Sbjct: 1   MDDPSLKPVFHGLTLETAISITKSVLLAIGFISTVILFKVAIIPKFASLFIITLPRLFVS 60

Query: 64  FRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTPISHENTHVSASTPYKLTHED 123
           FR WLSPPYVFIVFNFL+VAA ASS FRRQKDTSET +TPISHENT+VS S PYKLTHED
Sbjct: 61  FRSWLSPPYVFIVFNFLMVAALASSVFRRQKDTSETKFTPISHENTNVSPSNPYKLTHED 120

Query: 124 RDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEK 183
           RDFSI  RSGEIWNGISDEDEQ KEEEEE         K +KWDFPTLFTEKFSDPSSEK
Sbjct: 121 RDFSITGRSGEIWNGISDEDEQDKEEEEE---------KLLKWDFPTLFTEKFSDPSSEK 180

Query: 184 FCAYSSEKVEEEKDIGGGGGDDSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRAA 243
           FCAYSSEKVEEEKD G  G DDSMEATWKAIMER+ KQTPQLKKSQTWDSP PARLIRAA
Sbjct: 181 FCAYSSEKVEEEKDGGDVGDDDSMEATWKAIMERQEKQTPQLKKSQTWDSPLPARLIRAA 240

Query: 244 GGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQRQESE 303
             +EEPVAWDRNEVRK EKFQQTLSFRRKISMTSEELKSRAEAFIEMVNR IRLQRQESE
Sbjct: 241 VREEEPVAWDRNEVRKPEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRSIRLQRQESE 300

Query: 304 QRFLQAMKRSF 315
           QRFLQAMKRSF
Sbjct: 301 QRFLQAMKRSF 302

[Close]

BLAST of Lsi02G000310 vs. ExPASy TrEMBL
Match: A0A1S4DS64 (uncharacterized protein LOC103503737 OS=Cucumis melo OX=3656 GN=LOC103503737 PE=4 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 5.4e-133
Identity = 266/311 (85.53%), Postives = 275/311 (88.42%), Query Frame = 0


Query: 4   MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVS 63
           M DPS KPVF GLTLETAIS+TKS+LLAIG ISTVILFKVAIIPKFASL   TLPRL+VS
Sbjct: 1   MDDPSLKPVFHGLTLETAISITKSVLLAIGFISTVILFKVAIIPKFASLFIITLPRLFVS 60

Query: 64  FRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTPISHENTHVSASTPYKLTHED 123
           FR WLSPPYVFIVFNFL+VAA ASS FRRQKDTSET +TPISHENT+VS S PYKLTHED
Sbjct: 61  FRSWLSPPYVFIVFNFLMVAALASSVFRRQKDTSETKFTPISHENTNVSPSNPYKLTHED 120

Query: 124 RDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEK 183
           RDFSI  RSGEIWNGISDEDEQ KEEEEE         K +KWDFPTLFTEKFSDPSSEK
Sbjct: 121 RDFSITGRSGEIWNGISDEDEQDKEEEEE---------KLLKWDFPTLFTEKFSDPSSEK 180

Query: 184 FCAYSSEKVEEEKDIGGGGGDDSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRAA 243
           FCAYSSEKVEEEKD G  G DDSMEATWKAIMER+ KQTPQLKKSQTWDSP PARLIRAA
Sbjct: 181 FCAYSSEKVEEEKDGGDVGDDDSMEATWKAIMERQEKQTPQLKKSQTWDSPLPARLIRAA 240

Query: 244 GGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQRQESE 303
             +EEPVAWDRNEVRK EKFQQTLSFRRKISMTSEELKSRAEAFIEMVNR IRLQRQESE
Sbjct: 241 VREEEPVAWDRNEVRKPEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRSIRLQRQESE 300

Query: 304 QRFLQAMKRSF 315
           QRFLQAMKRSF
Sbjct: 301 QRFLQAMKRSF 302

[Close]

BLAST of Lsi02G000310 vs. ExPASy TrEMBL
Match: A0A0A0LQ95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G031790 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 1.9e-130
Identity = 260/311 (83.60%), Postives = 272/311 (87.46%), Query Frame = 0


Query: 4   MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVS 63
           M DP  KPVF GLTLETAIS+TKS+LLAIG ISTVILFKVAIIPKFA+LL  TLPRL+ S
Sbjct: 1   MDDPPLKPVFHGLTLETAISITKSVLLAIGFISTVILFKVAIIPKFANLLIITLPRLFFS 60

Query: 64  FRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTPISHENTHVSASTPYKLTHED 123
           FR WLSPPYVFIVFN L+ AAFASS FRRQKDTSETNYTPISHENT+VS S PYKLTHED
Sbjct: 61  FRSWLSPPYVFIVFNLLMFAAFASSLFRRQKDTSETNYTPISHENTNVSPSAPYKLTHED 120

Query: 124 RDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEK 183
           RDFSI  RSGEIWNGI DEDE+GKEEEEE         K +KWDFPTLFTEKFSDPSS+K
Sbjct: 121 RDFSISGRSGEIWNGIPDEDERGKEEEEE---------KLLKWDFPTLFTEKFSDPSSKK 180

Query: 184 FCAYSSEKVEEEKDIGGGGGDDSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRAA 243
            CAYS E  EEEK+ GGGG DDSMEATWKAIMER+ KQTPQLKKSQTWDSP PARLIRAA
Sbjct: 181 LCAYSCETEEEEKEGGGGGDDDSMEATWKAIMERQEKQTPQLKKSQTWDSPLPARLIRAA 240

Query: 244 GGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQRQESE 303
             +EEPVAWDRNEVRK EKFQQTLSFRRKISMTSEELKSRAEAFIEMVNR IRLQRQESE
Sbjct: 241 VREEEPVAWDRNEVRKPEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRSIRLQRQESE 300

Query: 304 QRFLQAMKRSF 315
           QRFLQAMKRSF
Sbjct: 301 QRFLQAMKRSF 302

[Close]

BLAST of Lsi02G000310 vs. ExPASy TrEMBL
Match: A0A6J1ECW6 (uncharacterized protein LOC111431395 OS=Cucurbita moschata OX=3662 GN=LOC111431395 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 8.2e-121
Identity = 248/316 (78.48%), Postives = 273/316 (86.39%), Query Frame = 0


Query: 4   MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVS 63
           M DPSPKPV   +TLETAISVTKSIL+++G+IST+ILFKVA+IPK A+L+ TTLPRLWVS
Sbjct: 1   MADPSPKPV--SMTLETAISVTKSILVSVGIISTLILFKVAVIPKVATLVITTLPRLWVS 60

Query: 64  FRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTPISHENTHVSASTPYKLTHED 123
           FRLWLSPPY+FIVFNF+I A  ASS FRRQKD SE NY  ISHENTHV+ASTPYK THED
Sbjct: 61  FRLWLSPPYIFIVFNFIIFAVAASSIFRRQKDASENNY--ISHENTHVAASTPYKWTHED 120

Query: 124 RDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEK 183
           R+FSI   S EIW+ I  EDEQGKE EE++EEE     KPVKWDFPTLFTEKFSDPSS K
Sbjct: 121 RNFSITG-SIEIWDRIPSEDEQGKEVEEQKEEE-----KPVKWDFPTLFTEKFSDPSSGK 180

Query: 184 FCAYSSEKVEEEKDIGGGGGD-DSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA 243
            CAY  EKVEEE+D GGGGGD DSM+ATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA
Sbjct: 181 LCAYPGEKVEEEEDAGGGGGDSDSMDATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA 240

Query: 244 ----AGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQ 303
               A  +E+PVAW RNEVRKSE+F QTLSFRRK+S+TSEELKSRAEAFIEMVN+ IRLQ
Sbjct: 241 AVDSAADEEDPVAWARNEVRKSERFHQTLSFRRKVSLTSEELKSRAEAFIEMVNQSIRLQ 300

Query: 304 RQESEQRFLQAMKRSF 315
           RQESEQRFLQAM+RSF
Sbjct: 301 RQESEQRFLQAMQRSF 306

[Close]

BLAST of Lsi02G000310 vs. ExPASy TrEMBL
Match: A0A6J1KH91 (uncharacterized protein LOC111495736 OS=Cucurbita maxima OX=3661 GN=LOC111495736 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 8.7e-115
Identity = 238/314 (75.80%), Postives = 266/314 (84.71%), Query Frame = 0


Query: 4   MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVS 63
           M  PSPKPV   +TLETAISVTKSIL+++G+IST+ILFKVA+IPK A+L+ +TLPRLWVS
Sbjct: 1   MAHPSPKPV--SMTLETAISVTKSILVSVGIISTLILFKVAVIPKVATLVISTLPRLWVS 60

Query: 64  FRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTPISHENTHVSASTPYKLTHED 123
           FRLWLSPPY+FIVFNF+I A  ASS FRRQKD SE  Y  ISHENTHV+ASTPYK TH+D
Sbjct: 61  FRLWLSPPYIFIVFNFIIFAVAASSIFRRQKDASENKY--ISHENTHVAASTPYKWTHDD 120

Query: 124 RDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEK 183
           R+FSI   S EIW+ I  EDEQGK+ EE++EEE     KPVKWDFPTL TEKFSDPSS K
Sbjct: 121 RNFSITG-SIEIWDRIPSEDEQGKQVEEQKEEE-----KPVKWDFPTLLTEKFSDPSSGK 180

Query: 184 FCAYSSEKVEEEKDIGGGGGDDSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA- 243
            CAY  EKVEEE+D  GGGG DSM+ATW AIMEREGKQTPQLKKSQTWDSPPPARLIRA 
Sbjct: 181 LCAYPGEKVEEEED-AGGGGSDSMDATWNAIMEREGKQTPQLKKSQTWDSPPPARLIRAA 240

Query: 244 ---AGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQR 303
              A  +E+PVAW RNEVRKSE+F QTLSFRRK+S+TSEELKSRAEAFIEMVN+ IRLQR
Sbjct: 241 VDSAADEEDPVAWARNEVRKSERFHQTLSFRRKVSLTSEELKSRAEAFIEMVNQSIRLQR 300

Query: 304 QESEQRFLQAMKRS 314
           QESEQRFLQAM+RS
Sbjct: 301 QESEQRFLQAMQRS 303

[Close]

BLAST of Lsi02G000310 vs. NCBI nr
Match: XP_016898842.1 (PREDICTED: uncharacterized protein LOC103503737 [Cucumis melo] >KAA0036047.1 DUF4408 domain protein [Cucumis melo var. makuwa] >TYJ98854.1 DUF4408 domain protein [Cucumis melo var. makuwa])

HSP 1 Score: 483.8 bits (1244), Expect = 1.1e-132
Identity = 266/311 (85.53%), Postives = 275/311 (88.42%), Query Frame = 0


Query: 4   MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVS 63
           M DPS KPVF GLTLETAIS+TKS+LLAIG ISTVILFKVAIIPKFASL   TLPRL+VS
Sbjct: 1   MDDPSLKPVFHGLTLETAISITKSVLLAIGFISTVILFKVAIIPKFASLFIITLPRLFVS 60

Query: 64  FRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTPISHENTHVSASTPYKLTHED 123
           FR WLSPPYVFIVFNFL+VAA ASS FRRQKDTSET +TPISHENT+VS S PYKLTHED
Sbjct: 61  FRSWLSPPYVFIVFNFLMVAALASSVFRRQKDTSETKFTPISHENTNVSPSNPYKLTHED 120

Query: 124 RDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEK 183
           RDFSI  RSGEIWNGISDEDEQ KEEEEE         K +KWDFPTLFTEKFSDPSSEK
Sbjct: 121 RDFSITGRSGEIWNGISDEDEQDKEEEEE---------KLLKWDFPTLFTEKFSDPSSEK 180

Query: 184 FCAYSSEKVEEEKDIGGGGGDDSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRAA 243
           FCAYSSEKVEEEKD G  G DDSMEATWKAIMER+ KQTPQLKKSQTWDSP PARLIRAA
Sbjct: 181 FCAYSSEKVEEEKDGGDVGDDDSMEATWKAIMERQEKQTPQLKKSQTWDSPLPARLIRAA 240

Query: 244 GGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQRQESE 303
             +EEPVAWDRNEVRK EKFQQTLSFRRKISMTSEELKSRAEAFIEMVNR IRLQRQESE
Sbjct: 241 VREEEPVAWDRNEVRKPEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRSIRLQRQESE 300

Query: 304 QRFLQAMKRSF 315
           QRFLQAMKRSF
Sbjct: 301 QRFLQAMKRSF 302

[Close]

BLAST of Lsi02G000310 vs. NCBI nr
Match: XP_004137570.1 (uncharacterized protein LOC101216148 [Cucumis sativus] >KGN63958.1 hypothetical protein Csa_013432 [Cucumis sativus])

HSP 1 Score: 475.3 bits (1222), Expect = 4.0e-130
Identity = 260/311 (83.60%), Postives = 272/311 (87.46%), Query Frame = 0


Query: 4   MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVS 63
           M DP  KPVF GLTLETAIS+TKS+LLAIG ISTVILFKVAIIPKFA+LL  TLPRL+ S
Sbjct: 1   MDDPPLKPVFHGLTLETAISITKSVLLAIGFISTVILFKVAIIPKFANLLIITLPRLFFS 60

Query: 64  FRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTPISHENTHVSASTPYKLTHED 123
           FR WLSPPYVFIVFN L+ AAFASS FRRQKDTSETNYTPISHENT+VS S PYKLTHED
Sbjct: 61  FRSWLSPPYVFIVFNLLMFAAFASSLFRRQKDTSETNYTPISHENTNVSPSAPYKLTHED 120

Query: 124 RDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEK 183
           RDFSI  RSGEIWNGI DEDE+GKEEEEE         K +KWDFPTLFTEKFSDPSS+K
Sbjct: 121 RDFSISGRSGEIWNGIPDEDERGKEEEEE---------KLLKWDFPTLFTEKFSDPSSKK 180

Query: 184 FCAYSSEKVEEEKDIGGGGGDDSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRAA 243
            CAYS E  EEEK+ GGGG DDSMEATWKAIMER+ KQTPQLKKSQTWDSP PARLIRAA
Sbjct: 181 LCAYSCETEEEEKEGGGGGDDDSMEATWKAIMERQEKQTPQLKKSQTWDSPLPARLIRAA 240

Query: 244 GGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQRQESE 303
             +EEPVAWDRNEVRK EKFQQTLSFRRKISMTSEELKSRAEAFIEMVNR IRLQRQESE
Sbjct: 241 VREEEPVAWDRNEVRKPEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRSIRLQRQESE 300

Query: 304 QRFLQAMKRSF 315
           QRFLQAMKRSF
Sbjct: 301 QRFLQAMKRSF 302

[Close]

BLAST of Lsi02G000310 vs. NCBI nr
Match: XP_022923785.1 (uncharacterized protein LOC111431395 [Cucurbita moschata])

HSP 1 Score: 443.4 bits (1139), Expect = 1.7e-120
Identity = 248/316 (78.48%), Postives = 273/316 (86.39%), Query Frame = 0


Query: 4   MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVS 63
           M DPSPKPV   +TLETAISVTKSIL+++G+IST+ILFKVA+IPK A+L+ TTLPRLWVS
Sbjct: 1   MADPSPKPV--SMTLETAISVTKSILVSVGIISTLILFKVAVIPKVATLVITTLPRLWVS 60

Query: 64  FRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTPISHENTHVSASTPYKLTHED 123
           FRLWLSPPY+FIVFNF+I A  ASS FRRQKD SE NY  ISHENTHV+ASTPYK THED
Sbjct: 61  FRLWLSPPYIFIVFNFIIFAVAASSIFRRQKDASENNY--ISHENTHVAASTPYKWTHED 120

Query: 124 RDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEK 183
           R+FSI   S EIW+ I  EDEQGKE EE++EEE     KPVKWDFPTLFTEKFSDPSS K
Sbjct: 121 RNFSITG-SIEIWDRIPSEDEQGKEVEEQKEEE-----KPVKWDFPTLFTEKFSDPSSGK 180

Query: 184 FCAYSSEKVEEEKDIGGGGGD-DSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA 243
            CAY  EKVEEE+D GGGGGD DSM+ATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA
Sbjct: 181 LCAYPGEKVEEEEDAGGGGGDSDSMDATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA 240

Query: 244 ----AGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQ 303
               A  +E+PVAW RNEVRKSE+F QTLSFRRK+S+TSEELKSRAEAFIEMVN+ IRLQ
Sbjct: 241 AVDSAADEEDPVAWARNEVRKSERFHQTLSFRRKVSLTSEELKSRAEAFIEMVNQSIRLQ 300

Query: 304 RQESEQRFLQAMKRSF 315
           RQESEQRFLQAM+RSF
Sbjct: 301 RQESEQRFLQAMQRSF 306

[Close]

BLAST of Lsi02G000310 vs. NCBI nr
Match: KAG6584433.1 (hypothetical protein SDJN03_20365, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 443.0 bits (1138), Expect = 2.2e-120
Identity = 248/316 (78.48%), Postives = 273/316 (86.39%), Query Frame = 0


Query: 4   MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVS 63
           M DPSPKPV   +TLETAISVTKSIL+++G+IST+ILFKVA+IPK A+L+ TTLPRLWVS
Sbjct: 1   MADPSPKPV--SMTLETAISVTKSILVSVGIISTLILFKVAVIPKVATLVITTLPRLWVS 60

Query: 64  FRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTPISHENTHVSASTPYKLTHED 123
           FRLWLSPPY+FIVFNF+I A  ASS FRRQKD SE NY  ISHENTHV+ASTPYK THED
Sbjct: 61  FRLWLSPPYIFIVFNFIIFAVAASSIFRRQKDASENNY--ISHENTHVAASTPYKWTHED 120

Query: 124 RDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEK 183
           R+FSI   S EIW+ I  EDEQGKE EE++EEE     KPVKWDFPTLFTEKFSDPSS K
Sbjct: 121 RNFSITG-SIEIWDRIPSEDEQGKEVEEQKEEE-----KPVKWDFPTLFTEKFSDPSSGK 180

Query: 184 FCAYSSEKVEEEKDIGGGGGD-DSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA 243
            CAY  EKVEEE+D GGGGGD DSM+ATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA
Sbjct: 181 SCAYPGEKVEEEEDAGGGGGDSDSMDATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA 240

Query: 244 ----AGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQ 303
               A  +E+PVAW RNEVRKSE+F QTLSFRRK+S+TSEELKSRAEAFIEMVN+ IRLQ
Sbjct: 241 AVNSAADEEDPVAWARNEVRKSERFHQTLSFRRKVSLTSEELKSRAEAFIEMVNKSIRLQ 300

Query: 304 RQESEQRFLQAMKRSF 315
           RQESEQRFLQAM+RSF
Sbjct: 301 RQESEQRFLQAMQRSF 306

[Close]

BLAST of Lsi02G000310 vs. NCBI nr
Match: KAG7020020.1 (hypothetical protein SDJN02_18988, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 441.0 bits (1133), Expect = 8.4e-120
Identity = 247/316 (78.16%), Postives = 272/316 (86.08%), Query Frame = 0


Query: 4   MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVS 63
           M DPSPKPV   +TLETAISVTKSIL+++G+IST+ILFKVA+IPK A+L+ TTLPRLWVS
Sbjct: 1   MADPSPKPV--SMTLETAISVTKSILVSVGIISTLILFKVAVIPKVATLVITTLPRLWVS 60

Query: 64  FRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTPISHENTHVSASTPYKLTHED 123
           FRLWLSPPY+FIVFNF+I A  ASS FRRQKD SE NY  ISHENTHV+ASTPYK THED
Sbjct: 61  FRLWLSPPYIFIVFNFIIFAVAASSIFRRQKDASENNY--ISHENTHVAASTPYKWTHED 120

Query: 124 RDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEK 183
           R+FSI   S EIW+ I  EDEQGKE EE++EEE     KPVKWDFPTLFTEKF DPSS K
Sbjct: 121 RNFSITG-SIEIWDRIPSEDEQGKEVEEQKEEE-----KPVKWDFPTLFTEKFCDPSSGK 180

Query: 184 FCAYSSEKVEEEKDIGGGGGD-DSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA 243
            CAY  EKVEEE+D GGGGGD DSM+ATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA
Sbjct: 181 SCAYPGEKVEEEEDAGGGGGDSDSMDATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA 240

Query: 244 ----AGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQ 303
               A  +E+PVAW RNEVRKSE+F QTLSFRRK+S+TSEELKSRAEAFIEMVN+ IRLQ
Sbjct: 241 AVNSAADEEDPVAWARNEVRKSERFHQTLSFRRKVSLTSEELKSRAEAFIEMVNKSIRLQ 300

Query: 304 RQESEQRFLQAMKRSF 315
           RQESEQRFLQAM+RSF
Sbjct: 301 RQESEQRFLQAMQRSF 306

[Close]

BLAST of Lsi02G000310 vs. TAIR 10
Match: AT1G61260.1 (Protein of unknown function (DUF761) )

HSP 1 Score: 45.8 bits (107), Expect = 7.3e-05
Identity = 90/342 (26.32%), Postives = 146/342 (42.69%), Query Frame = 0


Query: 25  TKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVSFRLWLSPPYVFIVFNFLIVAA 84
           TK++L++ G+ +  +L K++ +P       +  P LW S   WL PPY+++V N +I+  
Sbjct: 8   TKAVLISSGVATVALLLKLS-VPVAVDFSVSRAPILWSSLLSWLKPPYLYVVTNGIIITI 67

Query: 85  FASSA-FRRQKDTSETNYT--------PISHENTHVSASTPYKLTHEDRDFSIRARSGEI 144
            ASS  +R   D  E +           I  E   V+         E +D    A  G +
Sbjct: 68  VASSKYYRSHHDRDEEDEIVVYGGGGYKIQTEEPIVNQHQASPRILEVKDLDTGAHFGFV 127

Query: 145 WNGISDEDEQGK-------EEEEEE----------EEEEEEESKP---------VKWDF- 204
              +  E+ + +       ++EEEE          E+E EEE K          V+ D  
Sbjct: 128 VANLEAEELESEAVTAVVFDDEEEEKKIIDSAATAEDEIEEELKSVIMVENSDLVESDVI 187

Query: 205 -PTLFTEKFSDPSSEK---FCAYSSEKVEEEKDIGGGG-------GDDSMEATWKAIMER 264
            P +  E  + P  EK      +   K+ +    GG          ++++E TWK I   
Sbjct: 188 PPPMMIESENLPPIEKPLVTSRFGHRKLMKASQEGGRALRVTKPKKNETLENTWKMI--T 247

Query: 265 EGKQTP---QL-KKSQTWDSPPPARLIRAAGGDEEPVAWDRNEVRKSEKFQQ---TLSFR 313
           EGK TP   QL ++S T+             G+ +PV    +  R    + Q   T   R
Sbjct: 248 EGKSTPLTRQLYRRSDTFGRGDSG----GVDGEVKPVYKKSDTFRDRTNYYQLAETAKVR 307

The following BLAST results are available for this feature:

BLAST of Lsi02G000310 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi02G000310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T393	5.4e-133	85.53	DUF4408 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S4DS64	5.4e-133	85.53	uncharacterized protein LOC103503737 OS=Cucumis melo OX=3656 GN=LOC103503737 PE=...	[more]
A0A0A0LQ95	1.9e-130	83.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G031790 PE=4 SV=1	[more]
A0A6J1ECW6	8.2e-121	78.48	uncharacterized protein LOC111431395 OS=Cucurbita moschata OX=3662 GN=LOC1114313...	[more]
A0A6J1KH91	8.7e-115	75.80	uncharacterized protein LOC111495736 OS=Cucurbita maxima OX=3661 GN=LOC111495736...	[more]

BLAST of Lsi02G000310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016898842.1	1.1e-132	85.53	PREDICTED: uncharacterized protein LOC103503737 [Cucumis melo] >KAA0036047.1 DUF...	[more]
XP_004137570.1	4.0e-130	83.60	uncharacterized protein LOC101216148 [Cucumis sativus] >KGN63958.1 hypothetical ...	[more]
XP_022923785.1	1.7e-120	78.48	uncharacterized protein LOC111431395 [Cucurbita moschata]	[more]
KAG6584433.1	2.2e-120	78.48	hypothetical protein SDJN03_20365, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7020020.1	8.4e-120	78.16	hypothetical protein SDJN02_18988, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Lsi02G000310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61260.1	7.3e-05	26.32	Protein of unknown function (DUF761)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 139..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..161
None	No IPR available	PANTHER	PTHR33098	COTTON FIBER (DUF761)	coord: 24..311
None	No IPR available	PANTHER	PTHR33098:SF75	OS07G0563400 PROTEIN	coord: 24..311
IPR025520	Domain of unknown function DUF4408	PFAM	PF14364	DUF4408	coord: 58..88 e-value: 7.5E-6 score: 25.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G000310.1	Lsi02G000310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane