Lsi02G000200 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G000200
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	MYB transcription factor
Location	chr02: 263803 .. 264809 (-)
RNA-Seq Expression	Lsi02G000200
Synteny	Lsi02G000200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGTTATTATTTGTAAAATCAAAATAATTAGATCGGATTAGGGTTTTAGGATAATGTGCAGCAGAGGGCATTGGCGGCCTGCTGAAGACGAGAAGCTTCGAGAGCTGGTTGAGCGTTACGGACCTCATAATTGGAACGCCATAGCTCAAAAGCTTGAAGGAAGATCCGGGAAGAGCTGCCGGTTGAGATGGTTCAATCAATTGGATCCACGAATCAACAGAAGCCCTTTCACGGAGGAGGAAGAAGAGAGGCTGATGGCCTCACATAGGGTTCATGGGAATAGATGGGCCATCATCGCAAGGCTTTTCCCTGGCCGCACCGACAACGCCGTCAAGAACCACTGGCACGTCATCATGGCTCGTAGGTCTAGAATTAATAGATCCAAAACCCAAACCCAAACTCAAACTCCATCTTCTTTTCACAATAATCGCCTTCTTCTTTCTTCTTTTCTCCAACTCCATACATATCATCCCACTTCTAATTCATTCATCCCCAAACCACCACCTGGTAATTAATTTTATTCTATTCTTTCTTTTTTTATATGTAATTATAATTATATATATATTATGTTTCCTTATAATTATATATATATTATGTGTGTGCAGATGATAGAGTACATACGAATTCCATTCATTATTACGACTTTCTCCACATAAATACGGAGTCCATCAATGGAAGTGAAGTGATAGACAACTCAAGAAAAGAGGAGGATTATGAAGAGGTCAATGATCAAGAAGCCGCCGACACCGCCGGCCCGGTACTTCCCTTCATTGATTTCTTTTCTGCCTCCCAAACCTCCAACAACAACTCCATCTCATCCTAACATATATATATATATATATACATGCATATTATTAACCTCCTTTATCTTACATTTCATCTAACTCATTTGGGGCATCATCAAATCACACCCCGGCTACATATATACATACATGTAATCCATAAATATATTATAATTGTCATTTTGTACACACAATTTCAAACTTACATCACTTTTAGTATTTC

mRNA sequence

TTTTGTTATTATTTGTAAAATCAAAATAATTAGATCGGATTAGGGTTTTAGGATAATGTGCAGCAGAGGGCATTGGCGGCCTGCTGAAGACGAGAAGCTTCGAGAGCTGGTTGAGCGTTACGGACCTCATAATTGGAACGCCATAGCTCAAAAGCTTGAAGGAAGATCCGGGAAGAGCTGCCGGTTGAGATGGTTCAATCAATTGGATCCACGAATCAACAGAAGCCCTTTCACGGAGGAGGAAGAAGAGAGGCTGATGGCCTCACATAGGGTTCATGGGAATAGATGGGCCATCATCGCAAGGCTTTTCCCTGGCCGCACCGACAACGCCGTCAAGAACCACTGGCACGTCATCATGGCTCGTAGGTCTAGAATTAATAGATCCAAAACCCAAACCCAAACTCAAACTCCATCTTCTTTTCACAATAATCGCCTTCTTCTTTCTTCTTTTCTCCAACTCCATACATATCATCCCACTTCTAATTCATTCATCCCCAAACCACCACCTGATGATAGAGTACATACGAATTCCATTCATTATTACGACTTTCTCCACATAAATACGGAGTCCATCAATGGAAGTGAAGTGATAGACAACTCAAGAAAAGAGGAGGATTATGAAGAGGTCAATGATCAAGAAGCCGCCGACACCGCCGGCCCGGTACTTCCCTTCATTGATTTCTTTTCTGCCTCCCAAACCTCCAACAACAACTCCATCTCATCCTAACATATATATATATATATATACATGCATATTATTAACCTCCTTTATCTTACATTTCATCTAACTCATTTGGGGCATCATCAAATCACACCCCGGCTACATATATACATACATGTAATCCATAAATATATTATAATTGTCATTTTGTACACACAATTTCAAACTTACATCACTTTTAGTATTTC

Coding sequence (CDS)

ATGTGCAGCAGAGGGCATTGGCGGCCTGCTGAAGACGAGAAGCTTCGAGAGCTGGTTGAGCGTTACGGACCTCATAATTGGAACGCCATAGCTCAAAAGCTTGAAGGAAGATCCGGGAAGAGCTGCCGGTTGAGATGGTTCAATCAATTGGATCCACGAATCAACAGAAGCCCTTTCACGGAGGAGGAAGAAGAGAGGCTGATGGCCTCACATAGGGTTCATGGGAATAGATGGGCCATCATCGCAAGGCTTTTCCCTGGCCGCACCGACAACGCCGTCAAGAACCACTGGCACGTCATCATGGCTCGTAGGTCTAGAATTAATAGATCCAAAACCCAAACCCAAACTCAAACTCCATCTTCTTTTCACAATAATCGCCTTCTTCTTTCTTCTTTTCTCCAACTCCATACATATCATCCCACTTCTAATTCATTCATCCCCAAACCACCACCTGATGATAGAGTACATACGAATTCCATTCATTATTACGACTTTCTCCACATAAATACGGAGTCCATCAATGGAAGTGAAGTGATAGACAACTCAAGAAAAGAGGAGGATTATGAAGAGGTCAATGATCAAGAAGCCGCCGACACCGCCGGCCCGGTACTTCCCTTCATTGATTTCTTTTCTGCCTCCCAAACCTCCAACAACAACTCCATCTCATCCTAA

Protein sequence

MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLEGRSGKSCRLRWFNQLDPRINRSPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRINRSKTQTQTQTPSSFHNNRLLLSSFLQLHTYHPTSNSFIPKPPPDDRVHTNSIHYYDFLHINTESINGSEVIDNSRKEEDYEEVNDQEAADTAGPVLPFIDFFSASQTSNNNSISS

Homology

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BLAST of Lsi02G000200 vs. ExPASy Swiss-Prot
Match: Q6R0C4 (Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.7e-59
Identity = 133/250 (53.20%), Postives = 155/250 (62.00%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLEGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAEDEKLRELVE++GPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 2   MCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFT 61

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRINRSK--------- 120
           EEEEERL+ASHR+HGNRW++IAR FPGRTDNAVKNHWHVIMARR R  RSK         
Sbjct: 62  EEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGR-ERSKLRPRGLGHD 121

Query: 121 ----------------------TQTQTQTPSSFH--NNRLLLSSFLQLHTYHPTSNSFIP 180
                                 T T    P  F   N+  +L  FL        S + I 
Sbjct: 122 GTVAATGMIGNYKDCDKERRLATTTAINFPYQFSHINHFQVLKEFLTGKIGFRNSTTPIQ 181

Query: 181 KPPPDDRVHTNSIHYYDFLHINTESINGSEVIDNSRKEEDYEEVNDQEAADTAGPVLPFI 218
           +   D       + +Y+FL +NT+S    E+IDNSRK+E  EE  DQ         +PF 
Sbjct: 182 EGAIDQT--KRPMEFYNFLQVNTDS-KIHELIDNSRKDE--EEDVDQNNRIPNENCVPFF 241

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BLAST of Lsi02G000200 vs. ExPASy Swiss-Prot
Match: Q9FX36 (Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.5e-57
Identity = 127/251 (50.60%), Postives = 159/251 (63.35%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLEGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAEDEKL++LVE+YGPHNWNAIA KL GRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 3   MCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFT 62

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRINRSKTQTQTQTPS 120
           EEEEERL+A+HR+HGNRW+IIARLFPGRTDNAVKNHWHVIMARR+R   SK +    T S
Sbjct: 63  EEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTR-QTSKPRLLPSTTS 122

Query: 121 S---FHNNRLLLSSFLQLHTYHPTSNSFIPKPPPDDRV-------HTNSIH--------- 180
           S     + ++++SS    H Y   S+    K  P D +       H N +H         
Sbjct: 123 SSSLMASEQIMMSSGGYNHNY---SSDDRKKIFPADFINFPYKFSHINHLHFLKEFFTGK 182

Query: 181 ---------------YYDFLHINTESINGSEVIDNSRKEEDYEEVNDQEAADTAGPVLPF 218
                          +Y+FL +NT+S N SE+ID    +    + + +  +      +PF
Sbjct: 183 IALNHKANQSKKPMEFYNFLQVNTDS-NKSEIIDQDSGQSKRSDSDTKHESH-----VPF 242

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BLAST of Lsi02G000200 vs. ExPASy Swiss-Prot
Match: Q5NBM8 (Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV=2)

HSP 1 Score: 198.7 bits (504), Expect = 6.7e-50
Identity = 89/125 (71.20%), Postives = 105/125 (84.00%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLEGRSGKSCRLRWFNQLDPRINRSPFT 60
           +C+RGHWRPAED KL++LV +YGP NWN IA+KL+GRSGKSCRLRWFNQLDPRINR  FT
Sbjct: 46  LCARGHWRPAEDAKLKDLVAQYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPRINRRAFT 105

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSR-----INRSKTQTQ 120
           EEEEERLMA+HR +GN+WA+IARLFPGRTDNAVKNHWHV+MARR R       R K  + 
Sbjct: 106 EEEEERLMAAHRAYGNKWALIARLFPGRTDNAVKNHWHVLMARRHREQSGAFRRRKPSSS 165

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BLAST of Lsi02G000200 vs. ExPASy Swiss-Prot
Match: Q9LQX5 (Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.7e-48
Identity = 93/160 (58.13%), Postives = 118/160 (73.75%), Query Frame = 0


Query: 4   RGHWRPAEDEKLRELVERYGPHNWNAIAQKLEGRSGKSCRLRWFNQLDPRINRSPFTEEE 63
           RGHWRPAED KL+ELV  YGP NWN IA+KL+GRSGKSCRLRWFNQLDPRINR  FTEEE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 157

Query: 64  EERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRINRSKTQTQTQTPSSFH 123
           EERLM +HR++GN+WA+IARLFPGRTDN+VKNHWHV+MAR+ R          +  S++ 
Sbjct: 158 EERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYR----------EHSSAYR 217

Query: 124 NNRLLLSSFLQLHTYHPTSNSFIPKPPPDDRVHTNSIHYY 164
             +L+ ++ L+ H     +N+  P P P+     ++ HY+
Sbjct: 218 RRKLMSNNPLKPH----LTNNHHPNPNPNYHSFISTNHYF 243

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BLAST of Lsi02G000200 vs. ExPASy Swiss-Prot
Match: Q9SEZ4 (Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.4e-47
Identity = 85/104 (81.73%), Postives = 95/104 (91.35%), Query Frame = 0


Query: 3   SRGHWRPAEDEKLRELVERYGPHNWNAIAQKLEGRSGKSCRLRWFNQLDPRINRSPFTEE 62
           SRGHWRPAED KL+ELV  YGP NWN IA+KL+GRSGKSCRLRWFNQLDPRINR  FTEE
Sbjct: 106 SRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEE 165

Query: 63  EEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSR 107
           EEERLM +HR++GN+WA+IARLFPGRTDN+VKNHWHVIMAR+ R
Sbjct: 166 EEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFR 209

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BLAST of Lsi02G000200 vs. ExPASy TrEMBL
Match: A0A0A0LPV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G029570 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.5e-92
Identity = 185/236 (78.39%), Postives = 199/236 (84.32%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLEGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKL+GRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRINRSKTQTQTQTPS 120
           EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSR N+SKTQT TQT +
Sbjct: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSR-NKSKTQTLTQTLT 120

Query: 121 SFH-----NNRLLLSSFLQLHTYHPTSN-SFIPKPPPDD-----RVHTNS--IHYYDFLH 180
             H     NNRLLLSSFLQLH Y PTSN SFIPKPPPDD       H++   IHYYDFL 
Sbjct: 121 QTHNNNNNNNRLLLSSFLQLHAY-PTSNISFIPKPPPDDAAAAAAAHSSCSIIHYYDFLQ 180

Query: 181 IN-TESINGSEVIDNSRKEEDYEEVNDQEAADTAGPVLPFIDFFSASQTSNNNSIS 223
           +N T+S+NGSEVIDNS ++EDYEEVN+    +    +LPFIDFFSAS  SNN SIS
Sbjct: 181 VNSTDSMNGSEVIDNSSRKEDYEEVNNNNNGEQQAVLLPFIDFFSAS--SNNTSIS 232

[Close]

BLAST of Lsi02G000200 vs. ExPASy TrEMBL
Match: A0A1S3C1Q2 (transcriptional activator Myb-like OS=Cucumis melo OX=3656 GN=LOC103495663 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 5.8e-89
Identity = 178/237 (75.11%), Postives = 196/237 (82.70%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLEGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKL+GRSGKSCRLRWFNQLDPRINRSPFT
Sbjct: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRINRSKTQTQTQTPS 120
           EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSR N+SKTQT TQT +
Sbjct: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSR-NKSKTQTLTQTLT 120

Query: 121 SFHNN------RLLLSSFLQLHTYHPTSNSFIPKPPPDD-----RVHTNS--IHYYDFLH 180
             HNN      RLLLSSFLQLH Y  ++ SF+PKPP DD       H++   IHYYDFL 
Sbjct: 121 QTHNNNHNNNHRLLLSSFLQLHAYPTSTISFVPKPPSDDAAAAAAAHSSCSIIHYYDFLQ 180

Query: 181 IN-TESINGSEVIDNSRKEEDYEEV-NDQEAADTAGPVLPFIDFFSASQTSNNNSIS 223
           +N T+S NGSEVIDNS ++EDYEEV N+  + +    +LPFIDFFSAS  +N+ SIS
Sbjct: 181 VNSTDSTNGSEVIDNSSRKEDYEEVNNNNNSGEQQAVLLPFIDFFSAS--NNDTSIS 234

[Close]

BLAST of Lsi02G000200 vs. ExPASy TrEMBL
Match: A0A6J1KP91 (transcription factor MYB52-like OS=Cucurbita maxima OX=3661 GN=LOC111495269 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 5.3e-82
Identity = 171/244 (70.08%), Postives = 188/244 (77.05%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLEGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAED+KLRELVERYGPHNWNAIAQKL+GRSGKSCRLRWFNQLDPRINRSPFT
Sbjct: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRIN---------RSK 120
           EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMAR+SR +         ++K
Sbjct: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKAK 120

Query: 121 TQTQTQTPSSFHNNRLLLSSFLQL------------HTYHPTS-NSFIPKPPPDDRVHTN 180
             T+TQT S    + LLLSSFLQ             H+ +P   +SFIPK  P DR    
Sbjct: 121 AITKTQTLSPSSQSHLLLSSFLQTSCPPNNASLFLNHSLYPNPISSFIPK--PTDR---- 180

Query: 181 SIHYYDFLHINTESINGSEVIDNSRKEEDYEEVNDQEAADTAGPVLPFIDFFSASQTSNN 223
           S+ +YDFLH+N ESIN SEVIDNSRK EDYEEVN +  A  A P+ PFIDFFSA QTSN+
Sbjct: 181 SVEFYDFLHLNAESINASEVIDNSRK-EDYEEVNQEATATAARPLFPFIDFFSA-QTSNS 236

[Close]

BLAST of Lsi02G000200 vs. ExPASy TrEMBL
Match: A0A6J1EDT2 (transcription factor MYB52-like OS=Cucurbita moschata OX=3662 GN=LOC111431625 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 5.3e-82
Identity = 172/243 (70.78%), Postives = 188/243 (77.37%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLEGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAED+KLRELVERYGPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINRSPFT
Sbjct: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRIN-------RSKTQ 120
           EEEEERLM SHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMAR+SR +       ++KT+
Sbjct: 61  EEEEERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTK 120

Query: 121 TQTQTPSSFHNNRLLLSSFLQL-------------HTYHPTS-NSFIPKPPPDDRVHTNS 180
           T+T TPSS   N LL SSFLQ              H+ +P   +SFIPK  P DR    S
Sbjct: 121 TKTLTPSS--QNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPISSFIPK--PTDR----S 180

Query: 181 IHYYDFLHINTESINGSEVIDNSRKEEDYEEVNDQEAADTAGPVLPFIDFFSASQTSNNN 223
           + +YDFLH+N ESIN SEVIDNSRK EDYEEVN +  A  A P+ PFIDFFSA QTSN+ 
Sbjct: 181 VEFYDFLHLNAESINASEVIDNSRK-EDYEEVNQEATATAARPLFPFIDFFSA-QTSNSI 233

[Close]

BLAST of Lsi02G000200 vs. ExPASy TrEMBL
Match: A0A6J1CAM4 (transcription factor MYB52-like OS=Momordica charantia OX=3673 GN=LOC111008971 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.3e-67
Identity = 141/218 (64.68%), Postives = 160/218 (73.39%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLEGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAEDEKLRELVER+G HNWNAIAQK+EGRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 35  MCSRGHWRPAEDEKLRELVERHGAHNWNAIAQKVEGRSGKSCRLRWFNQLDPRINRTPFT 94

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRINRSKTQTQTQTPS 120
           ++EE RL+ASHR+HGNRWAIIAR FPGRTDNA+KNHWHVIMAR  R ++S          
Sbjct: 95  QDEERRLLASHRIHGNRWAIIARHFPGRTDNALKNHWHVIMARSKRKSKST--------- 154

Query: 121 SFHNNRLLLSSFLQLHTYHPTSNSFIPKPPPDDRVHTNSIHYYDFLHINTESING--SEV 180
               N   L +F  ++   P   S IP P PD       + +YDFLH+N + I    SEV
Sbjct: 155 ---QNHHRLFNFPNIYYSSPNPTSSIPNPTPDTSNDHAVVEFYDFLHLNADYITATRSEV 214

Query: 181 IDNSRKEEDYEEVNDQEAADTAGPVLPFIDFFSASQTS 217
           IDNSRK++  EEVN Q  AD A P LPFIDFFSA QTS
Sbjct: 215 IDNSRKDD--EEVNQQAQADDALP-LPFIDFFSA-QTS 236

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BLAST of Lsi02G000200 vs. NCBI nr
Match: XP_038895550.1 (transcription factor MYB54-like [Benincasa hispida])

HSP 1 Score: 351.7 bits (901), Expect = 4.7e-93
Identity = 191/237 (80.59%), Postives = 202/237 (85.23%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLEGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKL+GRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRINRSKTQTQTQTPS 120
           EEEEERLMASHR+HGNRWAIIARLFPGRTDNAVKNHWHVIMARRSR N+SKTQTQT + S
Sbjct: 61  EEEEERLMASHRLHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSR-NKSKTQTQTPSNS 120

Query: 121 SFH-----------NNRLLLSSFLQLHTYHPTSNS-FIPKPPPDDRVHTN-SIHYYDFLH 180
             H           +NRLLLSSFLQLHT  PTSNS FIPKPP  D   TN S+HYYDFL+
Sbjct: 121 LHHHNNNHHHHHHNHNRLLLSSFLQLHTC-PTSNSLFIPKPPSVDAARTNASVHYYDFLN 180

Query: 181 INTESINGSEVIDNSRKEEDYEEVNDQEAADTAGPVLPFIDFFSASQTS-NNNSISS 224
           +NTESINGSEVIDNSRK EDYEEVN+ E       VLPFIDFFSASQTS NN+SISS
Sbjct: 181 VNTESINGSEVIDNSRK-EDYEEVNNGEHQS----VLPFIDFFSASQTSTNNDSISS 230

[Close]

BLAST of Lsi02G000200 vs. NCBI nr
Match: XP_011649446.1 (transcription factor MYB52 [Cucumis sativus] >KGN63930.1 hypothetical protein Csa_013427 [Cucumis sativus])

HSP 1 Score: 348.2 bits (892), Expect = 5.2e-92
Identity = 185/236 (78.39%), Postives = 199/236 (84.32%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLEGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKL+GRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRINRSKTQTQTQTPS 120
           EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSR N+SKTQT TQT +
Sbjct: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSR-NKSKTQTLTQTLT 120

Query: 121 SFH-----NNRLLLSSFLQLHTYHPTSN-SFIPKPPPDD-----RVHTNS--IHYYDFLH 180
             H     NNRLLLSSFLQLH Y PTSN SFIPKPPPDD       H++   IHYYDFL 
Sbjct: 121 QTHNNNNNNNRLLLSSFLQLHAY-PTSNISFIPKPPPDDAAAAAAAHSSCSIIHYYDFLQ 180

Query: 181 IN-TESINGSEVIDNSRKEEDYEEVNDQEAADTAGPVLPFIDFFSASQTSNNNSIS 223
           +N T+S+NGSEVIDNS ++EDYEEVN+    +    +LPFIDFFSAS  SNN SIS
Sbjct: 181 VNSTDSMNGSEVIDNSSRKEDYEEVNNNNNGEQQAVLLPFIDFFSAS--SNNTSIS 232

[Close]

BLAST of Lsi02G000200 vs. NCBI nr
Match: XP_008455801.1 (PREDICTED: transcriptional activator Myb-like [Cucumis melo])

HSP 1 Score: 337.0 bits (863), Expect = 1.2e-88
Identity = 178/237 (75.11%), Postives = 196/237 (82.70%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLEGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKL+GRSGKSCRLRWFNQLDPRINRSPFT
Sbjct: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRINRSKTQTQTQTPS 120
           EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSR N+SKTQT TQT +
Sbjct: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSR-NKSKTQTLTQTLT 120

Query: 121 SFHNN------RLLLSSFLQLHTYHPTSNSFIPKPPPDD-----RVHTNS--IHYYDFLH 180
             HNN      RLLLSSFLQLH Y  ++ SF+PKPP DD       H++   IHYYDFL 
Sbjct: 121 QTHNNNHNNNHRLLLSSFLQLHAYPTSTISFVPKPPSDDAAAAAAAHSSCSIIHYYDFLQ 180

Query: 181 IN-TESINGSEVIDNSRKEEDYEEV-NDQEAADTAGPVLPFIDFFSASQTSNNNSIS 223
           +N T+S NGSEVIDNS ++EDYEEV N+  + +    +LPFIDFFSAS  +N+ SIS
Sbjct: 181 VNSTDSTNGSEVIDNSSRKEDYEEVNNNNNSGEQQAVLLPFIDFFSAS--NNDTSIS 234

[Close]

BLAST of Lsi02G000200 vs. NCBI nr
Match: XP_023520216.1 (transcription factor MYB52-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 314.3 bits (804), Expect = 8.4e-82
Identity = 172/241 (71.37%), Postives = 188/241 (78.01%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLEGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAED+KLRELVERYGPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINRSPFT
Sbjct: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRIN-----RSKTQTQ 120
           EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMAR+SR +     ++K +T+
Sbjct: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTK 120

Query: 121 TQTPSSFHNNRLLLSSFLQL-------------HTYHPTS-NSFIPKPPPDDRVHTNSIH 180
           T TPSS   N LL SSFLQ              H+ +P   +SFIPK  P DR    S+ 
Sbjct: 121 TLTPSS--QNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPISSFIPK--PTDR----SVE 180

Query: 181 YYDFLHINTESINGSEVIDNSRKEEDYEEVNDQEAADTAGPVLPFIDFFSASQTSNNNSI 223
           +YDFLH+N ESIN SEVIDNSRK EDYEEVN +  A  A P+ PFIDFFSA QTSN+ S 
Sbjct: 181 FYDFLHLNAESINASEVIDNSRK-EDYEEVNQEATATAARPLFPFIDFFSA-QTSNSISS 231

[Close]

BLAST of Lsi02G000200 vs. NCBI nr
Match: XP_022924085.1 (transcription factor MYB52-like [Cucurbita moschata] >KAG6584475.1 Transcription factor MYB52, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020062.1 Transcription factor MYB52 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 313.9 bits (803), Expect = 1.1e-81
Identity = 172/243 (70.78%), Postives = 188/243 (77.37%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLEGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAED+KLRELVERYGPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINRSPFT
Sbjct: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRIN-------RSKTQ 120
           EEEEERLM SHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMAR+SR +       ++KT+
Sbjct: 61  EEEEERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTK 120

Query: 121 TQTQTPSSFHNNRLLLSSFLQL-------------HTYHPTS-NSFIPKPPPDDRVHTNS 180
           T+T TPSS   N LL SSFLQ              H+ +P   +SFIPK  P DR    S
Sbjct: 121 TKTLTPSS--QNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPISSFIPK--PTDR----S 180

Query: 181 IHYYDFLHINTESINGSEVIDNSRKEEDYEEVNDQEAADTAGPVLPFIDFFSASQTSNNN 223
           + +YDFLH+N ESIN SEVIDNSRK EDYEEVN +  A  A P+ PFIDFFSA QTSN+ 
Sbjct: 181 VEFYDFLHLNAESINASEVIDNSRK-EDYEEVNQEATATAARPLFPFIDFFSA-QTSNSI 233

[Close]

BLAST of Lsi02G000200 vs. TAIR 10
Match: AT1G17950.1 (myb domain protein 52 )

HSP 1 Score: 229.2 bits (583), Expect = 3.3e-60
Identity = 133/250 (53.20%), Postives = 155/250 (62.00%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLEGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAEDEKLRELVE++GPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 2   MCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFT 61

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRINRSK--------- 120
           EEEEERL+ASHR+HGNRW++IAR FPGRTDNAVKNHWHVIMARR R  RSK         
Sbjct: 62  EEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGR-ERSKLRPRGLGHD 121

Query: 121 ----------------------TQTQTQTPSSFH--NNRLLLSSFLQLHTYHPTSNSFIP 180
                                 T T    P  F   N+  +L  FL        S + I 
Sbjct: 122 GTVAATGMIGNYKDCDKERRLATTTAINFPYQFSHINHFQVLKEFLTGKIGFRNSTTPIQ 181

Query: 181 KPPPDDRVHTNSIHYYDFLHINTESINGSEVIDNSRKEEDYEEVNDQEAADTAGPVLPFI 218
           +   D       + +Y+FL +NT+S    E+IDNSRK+E  EE  DQ         +PF 
Sbjct: 182 EGAIDQT--KRPMEFYNFLQVNTDS-KIHELIDNSRKDE--EEDVDQNNRIPNENCVPFF 241

[Close]

BLAST of Lsi02G000200 vs. TAIR 10
Match: AT1G73410.1 (myb domain protein 54 )

HSP 1 Score: 224.2 bits (570), Expect = 1.1e-58
Identity = 127/251 (50.60%), Postives = 159/251 (63.35%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLEGRSGKSCRLRWFNQLDPRINRSPFT 60
           MCSRGHWRPAEDEKL++LVE+YGPHNWNAIA KL GRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 3   MCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFT 62

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRINRSKTQTQTQTPS 120
           EEEEERL+A+HR+HGNRW+IIARLFPGRTDNAVKNHWHVIMARR+R   SK +    T S
Sbjct: 63  EEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTR-QTSKPRLLPSTTS 122

Query: 121 S---FHNNRLLLSSFLQLHTYHPTSNSFIPKPPPDDRV-------HTNSIH--------- 180
           S     + ++++SS    H Y   S+    K  P D +       H N +H         
Sbjct: 123 SSSLMASEQIMMSSGGYNHNY---SSDDRKKIFPADFINFPYKFSHINHLHFLKEFFTGK 182

Query: 181 ---------------YYDFLHINTESINGSEVIDNSRKEEDYEEVNDQEAADTAGPVLPF 218
                          +Y+FL +NT+S N SE+ID    +    + + +  +      +PF
Sbjct: 183 IALNHKANQSKKPMEFYNFLQVNTDS-NKSEIIDQDSGQSKRSDSDTKHESH-----VPF 242

[Close]

BLAST of Lsi02G000200 vs. TAIR 10
Match: AT1G26780.1 (myb domain protein 117 )

HSP 1 Score: 194.1 bits (492), Expect = 1.2e-49
Identity = 93/160 (58.13%), Postives = 118/160 (73.75%), Query Frame = 0


Query: 4   RGHWRPAEDEKLRELVERYGPHNWNAIAQKLEGRSGKSCRLRWFNQLDPRINRSPFTEEE 63
           RGHWRPAED KL+ELV  YGP NWN IA+KL+GRSGKSCRLRWFNQLDPRINR  FTEEE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 157

Query: 64  EERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRINRSKTQTQTQTPSSFH 123
           EERLM +HR++GN+WA+IARLFPGRTDN+VKNHWHV+MAR+ R          +  S++ 
Sbjct: 158 EERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYR----------EHSSAYR 217

Query: 124 NNRLLLSSFLQLHTYHPTSNSFIPKPPPDDRVHTNSIHYY 164
             +L+ ++ L+ H     +N+  P P P+     ++ HY+
Sbjct: 218 RRKLMSNNPLKPH----LTNNHHPNPNPNYHSFISTNHYF 243

[Close]

BLAST of Lsi02G000200 vs. TAIR 10
Match: AT1G26780.2 (myb domain protein 117 )

HSP 1 Score: 194.1 bits (492), Expect = 1.2e-49
Identity = 93/160 (58.13%), Postives = 118/160 (73.75%), Query Frame = 0


Query: 4   RGHWRPAEDEKLRELVERYGPHNWNAIAQKLEGRSGKSCRLRWFNQLDPRINRSPFTEEE 63
           RGHWRPAED KL+ELV  YGP NWN IA+KL+GRSGKSCRLRWFNQLDPRINR  FTEEE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 157

Query: 64  EERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRINRSKTQTQTQTPSSFH 123
           EERLM +HR++GN+WA+IARLFPGRTDN+VKNHWHV+MAR+ R          +  S++ 
Sbjct: 158 EERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYR----------EHSSAYR 217

Query: 124 NNRLLLSSFLQLHTYHPTSNSFIPKPPPDDRVHTNSIHYY 164
             +L+ ++ L+ H     +N+  P P P+     ++ HY+
Sbjct: 218 RRKLMSNNPLKPH----LTNNHHPNPNPNYHSFISTNHYF 243

[Close]

BLAST of Lsi02G000200 vs. TAIR 10
Match: AT4G33450.1 (myb domain protein 69 )

HSP 1 Score: 191.4 bits (485), Expect = 7.6e-49
Identity = 92/138 (66.67%), Postives = 105/138 (76.09%), Query Frame = 0


Query: 2   CSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLEGRSGKSCRLRWFNQLDPRINRSPFTE 61
           C RGHWRP ED+ LR+LVE+YGP NWN IAQ L GRSGKSCRLRW+NQLDP I + PFTE
Sbjct: 17  CQRGHWRPVEDDNLRQLVEQYGPKNWNFIAQHLYGRSGKSCRLRWYNQLDPNITKKPFTE 76

Query: 62  EEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRINRSKTQTQTQTPSS 121
           EEEERL+ +HR+ GNRWA IARLFPGRTDNAVKNH+HVIMARR R N S T T T    +
Sbjct: 77  EEEERLLKAHRIQGNRWASIARLFPGRTDNAVKNHFHVIMARRKRENFSSTATSTFN-QT 136

Query: 122 FHNNRLLLSSFLQLHTYH 140
           +H      SS  +L+  H
Sbjct: 137 WHTVLSPSSSLTRLNRSH 153

The following BLAST results are available for this feature:

BLAST of Lsi02G000200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6R0C4	4.7e-59	53.20	Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1	[more]
Q9FX36	1.5e-57	50.60	Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1	[more]
Q5NBM8	6.7e-50	71.20	Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV...	[more]
Q9LQX5	1.7e-48	58.13	Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1	[more]
Q9SEZ4	1.4e-47	81.73	Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1	[more]

BLAST of Lsi02G000200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPV0	2.5e-92	78.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G029570 PE=4 SV=1	[more]
A0A1S3C1Q2	5.8e-89	75.11	transcriptional activator Myb-like OS=Cucumis melo OX=3656 GN=LOC103495663 PE=4 ...	[more]
A0A6J1KP91	5.3e-82	70.08	transcription factor MYB52-like OS=Cucurbita maxima OX=3661 GN=LOC111495269 PE=4...	[more]
A0A6J1EDT2	5.3e-82	70.78	transcription factor MYB52-like OS=Cucurbita moschata OX=3662 GN=LOC111431625 PE...	[more]
A0A6J1CAM4	1.3e-67	64.68	transcription factor MYB52-like OS=Momordica charantia OX=3673 GN=LOC111008971 P...	[more]

BLAST of Lsi02G000200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895550.1	4.7e-93	80.59	transcription factor MYB54-like [Benincasa hispida]	[more]
XP_011649446.1	5.2e-92	78.39	transcription factor MYB52 [Cucumis sativus] >KGN63930.1 hypothetical protein Cs...	[more]
XP_008455801.1	1.2e-88	75.11	PREDICTED: transcriptional activator Myb-like [Cucumis melo]	[more]
XP_023520216.1	8.4e-82	71.37	transcription factor MYB52-like [Cucurbita pepo subsp. pepo]	[more]
XP_022924085.1	1.1e-81	70.78	transcription factor MYB52-like [Cucurbita moschata] >KAG6584475.1 Transcription...	[more]

BLAST of Lsi02G000200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17950.1	3.3e-60	53.20	myb domain protein 52	[more]
AT1G73410.1	1.1e-58	50.60	myb domain protein 54	[more]
AT1G26780.1	1.2e-49	58.13	myb domain protein 117	[more]
AT1G26780.2	1.2e-49	58.13	myb domain protein 117	[more]
AT4G33450.1	7.6e-49	66.67	myb domain protein 69	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 3..52 e-value: 4.6E-15 score: 66.0 coord: 55..103 e-value: 9.5E-14 score: 61.7
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 51..101 score: 9.802274
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 1..50 score: 11.265436
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 7..48 e-value: 2.81697E-14 score: 62.9782
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 58..98 e-value: 8.07975E-11 score: 53.7334
None	No IPR available	GENE3D	1.10.10.60		coord: 4..55 e-value: 1.6E-24 score: 87.6
None	No IPR available	GENE3D	1.10.10.60		coord: 57..127 e-value: 9.8E-19 score: 69.2
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 7..67 e-value: 9.5E-17 score: 61.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..200
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 1..114 coord: 157..213
None	No IPR available	PANTHER	PTHR45614:SF111	MYB-RELATED PROTEIN A-LIKE	coord: 1..114
None	No IPR available	PANTHER	PTHR45614:SF111	MYB-RELATED PROTEIN A-LIKE	coord: 157..213
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 51..105 score: 25.520588
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..50 score: 21.121695
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 4..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G000200.1	Lsi02G000200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding